Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003420.1

Orthogroup ID

OG0003402

Physical Location & Seq

Genomic Coordinates Reverse (-)

14414 .. 19933

Gene Structure 5520 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003420.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

atggcaggaaaagtcgctggaaaattagttgaccggagggctgacgtggcagtgggtcctgttgctgacatggcgcgggtcctagggctgatgtttgtgggcttctgggctgggccttattttctgccgtactttgagtcggccgatttagcaaattttacactggtttttggattttttattacggttcctgaaacatcagatcaagaggcttttgctaccaaaatttggtggaaattgggggtccggaagatggtgaatcggtggaatatttactgcgagttgtatggagcttccagtggccggttcggtgagtttcctgccgattcttggggtggggtcgccagttctggactcctgggatcgagttcttcaaggtgtgaggtggaggcagaaaaggctttaaggttttgtattcggattcaagttagtacagtgggcaaggagttttccagggaagtttggtggcacctaacgaggcttctaggcatggacaaatgtatggccaaaccgagggcatccagcgatgcaggtggtgtagcacctgccatggcattgcagaggctgctcttgaaaaaggcctttggagaagctaagccaaagtctctgtgttgctttttctctacagcaccaccttcattgccagcttttgattatgagccaaagccttacaatggtccacgcgcagatgaggtcttccagaagcgaaagcagtttctgggtccttctctttttcacttttatcagaagccacttaatattgttgaaggaaagatgcaatatttgtatgatgagaatggcaggcgttaccttgatgcatttgctgggatagtgacggtttctgctggacattgccatccagatgttttaaatgcaatctttgagcagagcaagcttctgcagcatgccacaactatatatttacaccatgcaatagctgattttgcagaggctttggcttcaaaatttcctggaaatctaaaggtagtgtactttgtgaattctgggtcagaagcaaatgagttagcaatgctgatagctcgtctatacactggtagtctggaaatgatttctctgagaaatggatatcacggaggaagttctaatacaatgagtttgacggcactcaacacatggaagtatccgattccacagggtgaaattcatcatgctgtgaatccagatccataccgtggagtctttggctctgatgcaaaaagttatgctaaagatgtgcaagatcacattgattttggaactgcaggaaaagtggccggatttatatctgaaacaattcagggtgttggaggagcagttgaactggctcctggatacctaaaattggtatacgacattgttcgcaaggctggtggtgtctgcattgctgatgaagttcaaactggatttggccgcacaggaactcattattggggctttgaaacacagggggtcattcctgatatagttactatggccaagggcattggaaatggattgccattgggagcagtggtgacaacaccagaaatagcaagtgtactagcccagaagactcaattcaacacttatggtggaaaccctgtatgctctgcaggaggacttgcagtgctcagagttattgataaagagaaacgtcaagttcattctgcagatgttggctctcatttgcttgctcggttgagagatcttcagcaaagatatgaaatcattggagatgtgagaggccggggcttaatggttggggtagaacttgtgactgacaggaatgagaagacacctgccaaggccgaaactgctatgttgtttgagaaactcagaggtctctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0008144 GO:0008150 GO:0008270 GO:0010035 GO:0010038 GO:0016020 GO:0019842 GO:0030170 GO:0031090 GO:0036094 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0048037 GO:0050662 GO:0050896 GO:0070279 GO:0097159 GO:0098588 GO:0098805 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00250 ko00260 ko00270 ko00280 ko01100 ko01110 map00250 map00260 map00270 map00280 map01100 map01110

Pfam Domains

Protein Families

Aminotran_3

Protein Analysis

608

Amino Acids

66.39

Weight (kDa)

8.64

Isoelectric Point (pI)

27.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003402)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39660 AT4G39660
fragaria_vesca	FvH4_1g21920
malus_domestica	MD15G1330500.v1.1
prunus_persica	Prupe.1G573800_v2.0.a1 Prupe.1G573800_v2.0.a1 Prupe.6G177100_v2.0.a1 Prupe.6G177100_v2.0.a1
pyrus_communis	pycom15g29470
rosa_chinensis	RchiOBHm_Chr2g0115931 RchiOBHm_Chr6g0298301
rosa_laevigata	RLG00000011518 RLG00000018224
rosa_multiflora	Rmu_sc0003420.1_g000003 Rmu_ssc0000197.1_g000006
rosa_roxburghii	Rroxscaffold_2G00127710 Rroxscaffold_2G00128500 Rroxscaffold_7G00169760
rosa_rugosa	Rorug02G0201300 Rorug06G0279900 Rorug06G0280000 Rorug06G0280100 Rorug06G0280200 Rorug06G0280300 Rorug06G0280300 Rorug06G0280400
rosa_samantha	Rh2AG258100 Rh2CG264700 Rh2DG266400 Rh6AG390800 Rh6BG399000 Rh6CG404900 Rh6DG391400
rosa_wichuraiana	Rw2G020240 Rw6G034120 Rw6G034160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	521, 553, 1786
Acc36I	ACCTGC	3 cut(s)	521, 553, 1786
AccB1I	GGYRCC	1 cut(s)	468
AccB7I	CCANNNNNTGG	2 cut(s)	228, 1193
AccI	GTMKAC	1 cut(s)	1347
AccII	CGCG	2 cut(s)	76, 684
AccIII	TCCGGA	1 cut(s)	246
AciI	CCGC	2 cut(s)	76, 1411
AclWI	GGATC	2 cut(s)	370, 1178
AcoI	YGGCCR	6 cut(s)	141, 301, 504, 1272, 1408, 1473
AcsI	RAATTY	5 cut(s)	154, 225, 965, 1000, 1161
AcuI	CTGAAG	1 cut(s)	1673
AdeI	CACNNNGTG	1 cut(s)	1157
AfaI	GTAC	4 cut(s)	131, 433, 992, 1539
AfiI	CCNNNNNNNGG	8 cut(s)	228, 253, 303, 330, 513, 674, 1193, 1342
AgsI	TTSAA	9 cut(s)	375, 425, 574, 767, 963, 1319, 1397, 1439, 1561
AjiI	CACGTC	1 cut(s)	46
AjnI	CCWGG	4 cut(s)	357, 452, 970, 1327
AjuI	GAANNNNNNNTTGG	2 cut(s)	1411, 1443
AluBI	AGCT	6 cut(s)	293, 593, 647, 895, 938, 1040
AluI	AGCT	6 cut(s)	293, 593, 647, 895, 938, 1040
Alw21I	GWGCWC	1 cut(s)	1611
Alw26I	GTCTC	1 cut(s)	609
AlwI	GGATC	2 cut(s)	370, 1178
AlwNI	CAGNNNCTG	2 cut(s)	565, 718
Aor13HI	TCCGGA	1 cut(s)	246
ApeKI	GCWGC	2 cut(s)	565, 901
ApoI	RAATTY	5 cut(s)	154, 225, 965, 1000, 1161
Asp700I	GAANNNNTTC	1 cut(s)	1293
AspA2I	CCTAGG	1 cut(s)	82
AspLEI	GCGC	2 cut(s)	76, 686
AspS9I	GGNCC	6 cut(s)	56, 79, 113, 244, 677, 722
AsuC2I	CCSGG	1 cut(s)	1727
AsuHPI	GGTGA	4 cut(s)	268, 323, 1169, 1525
AvaII	GGWCC	5 cut(s)	56, 79, 244, 677, 722
AvrII	CCTAGG	1 cut(s)	82
BalI	TGGCCA	2 cut(s)	506, 1475
BanI	GGYRCC	1 cut(s)	468
BarI	GAAGNNNNNNTAC	2 cut(s)	1090, 1122
BbsI	GAAGAC	3 cut(s)	688, 1556, 1778
Bbv12I	GWGCWC	1 cut(s)	1611
BbvI	GCAGC	2 cut(s)	552, 913
BccI	CCATC	2 cut(s)	247, 864
BceAI	ACGGC	2 cut(s)	112, 1137
BciT130I	CCWGG	4 cut(s)	359, 454, 972, 1329
BciVI	GTATCC	2 cut(s)	1152, 1325
BcnI	CCSGG	1 cut(s)	1727
BcoDI	GTCTC	1 cut(s)	609
BfaI	CTAG	4 cut(s)	83, 485, 1541, 1825
BfmI	CTRYAG	5 cut(s)	624, 899, 1260, 1590, 1647
BfuAI	ACCTGC	3 cut(s)	521, 553, 1786
BfuI	GTATCC	2 cut(s)	1152, 1325
BglII	AGATCT	1 cut(s)	1684
BisI	GCNGC	3 cut(s)	566, 902, 1411
BlnI	CCTAGG	1 cut(s)	82
BlpI	GCTNAGC	1 cut(s)	594
BlsI	GCNGC	3 cut(s)	567, 903, 1412
Bme1390I	CCNGG	5 cut(s)	359, 454, 972, 1329, 1727
Bme18I	GGWCC	5 cut(s)	56, 79, 244, 677, 722
BmgBI	CACGTC	1 cut(s)	46
BmgT120I	GGNCC	6 cut(s)	56, 79, 113, 244, 677, 722
BmiI	GGNNCC	7 cut(s)	57, 80, 189, 245, 470, 723, 1326
BmrFI	CCNGG	5 cut(s)	359, 454, 972, 1329, 1727
BmsI	GCATC	5 cut(s)	517, 527, 765, 805, 1201
BpiI	GAAGAC	3 cut(s)	688, 1556, 1778
Bpu1102I	GCTNAGC	1 cut(s)	594
BpuMI	CCSGG	1 cut(s)	1727
BsaBI	GATNNNNATC	1 cut(s)	1282
BsaJI	CCNNGG	9 cut(s)	82, 358, 453, 512, 549, 1192, 1476, 1726, 1782
BsaWI	WCCGGW	2 cut(s)	33, 246
BsaXI	ACNNNNNCTCC	4 cut(s)	1299, 1329, 1497, 1527
Bsc4I	CCNNNNNNNGG	8 cut(s)	228, 253, 303, 330, 513, 674, 1193, 1342
Bse118I	RCCGGY	1 cut(s)	303
Bse1I	ACTGG	6 cut(s)	168, 297, 345, 1057, 1326, 1405
Bse3DI	GCAATG	5 cut(s)	554, 638, 850, 1035, 1380
Bse8I	GATNNNNATC	1 cut(s)	1282
BseAI	TCCGGA	1 cut(s)	246
BseBI	CCWGG	4 cut(s)	359, 454, 972, 1329
BseDI	CCNNGG	9 cut(s)	82, 358, 453, 512, 549, 1192, 1476, 1726, 1782
BseGI	GGATG	2 cut(s)	518, 856
BseJI	GATNNNNATC	1 cut(s)	1282
BseLI	CCNNNNNNNGG	8 cut(s)	228, 253, 303, 330, 513, 674, 1193, 1342
BseMI	GCAATG	5 cut(s)	554, 638, 850, 1035, 1380
BseMII	CTCAG	2 cut(s)	1067, 1624
BseNI	ACTGG	6 cut(s)	168, 297, 345, 1057, 1326, 1405
BseRI	GAGGAG	1 cut(s)	1323
BseX3I	CGGCCG	1 cut(s)	141
BseXI	GCAGC	2 cut(s)	552, 913
BseYI	CCCAGC	2 cut(s)	110, 824
Bsh1236I	CGCG	2 cut(s)	76, 684
Bsh1285I	CGRYCG	1 cut(s)	144
BshNI	GGYRCC	1 cut(s)	468
BsiEI	CGRYCG	1 cut(s)	144
BsiHKAI	GWGCWC	1 cut(s)	1611
BsiSI	CCGG	5 cut(s)	34, 247, 304, 1275, 1726
BslI	CCNNNNNNNGG	8 cut(s)	228, 253, 303, 330, 513, 674, 1193, 1342
BsmAI	GTCTC	1 cut(s)	609
Bsp1286I	GDGCHC	1 cut(s)	1611
Bsp13I	TCCGGA	1 cut(s)	246
Bsp143I	GATC	5 cut(s)	202, 362, 1183, 1240, 1684
Bsp1720I	GCTNAGC	1 cut(s)	594
Bsp19I	CCATGG	1 cut(s)	549
BspACI	CCGC	2 cut(s)	76, 1411
BspCNI	CTCAG	3 cut(s)	1068, 1623, 1827
BspEI	TCCGGA	1 cut(s)	246
BspFNI	CGCG	2 cut(s)	76, 684
BspLI	GGNNCC	7 cut(s)	57, 80, 189, 245, 470, 723, 1326
BspMAI	CTGCAG	4 cut(s)	903, 1264, 1594, 1651
BspMI	ACCTGC	3 cut(s)	521, 553, 1786
BspPI	GGATC	2 cut(s)	370, 1178
BspT107I	GGYRCC	1 cut(s)	468
BsrDI	GCAATG	5 cut(s)	554, 638, 850, 1035, 1380
BsrFI	RCCGGY	1 cut(s)	303
BsrI	ACTGG	6 cut(s)	168, 297, 345, 1057, 1326, 1405
BssAI	RCCGGY	1 cut(s)	303
BssECI	CCNNGG	9 cut(s)	82, 358, 453, 512, 549, 1192, 1476, 1726, 1782
BssMI	GATC	5 cut(s)	202, 362, 1183, 1240, 1684
BssNAI	GTATAC	1 cut(s)	1348
BssT1I	CCWWGG	4 cut(s)	82, 549, 1476, 1782
Bst1107I	GTATAC	1 cut(s)	1348
Bst2UI	CCWGG	4 cut(s)	359, 454, 972, 1329
Bst4CI	ACNGT	4 cut(s)	187, 436, 838, 1193
BstAPI	GCANNNNNTGC	1 cut(s)	565
BstC8I	GCNNGC	5 cut(s)	645, 803, 893, 906, 1671
BstDEI	CTNAG	4 cut(s)	594, 1076, 1610, 1814
BstDSI	CCRYGG	2 cut(s)	549, 1192
BstF5I	GGATG	2 cut(s)	518, 856
BstFNI	CGCG	2 cut(s)	76, 684
BstHHI	GCGC	2 cut(s)	76, 686
BstKTI	GATC	5 cut(s)	205, 365, 1186, 1243, 1687
BstMAI	GTCTC	1 cut(s)	609
BstMBI	GATC	5 cut(s)	202, 362, 1183, 1240, 1684
BstMCI	CGRYCG	1 cut(s)	144
BstMWI	GCNNNNNNNGC	9 cut(s)	47, 71, 149, 398, 565, 892, 901, 944, 1793
BstNI	CCWGG	4 cut(s)	359, 454, 972, 1329
BstNSI	RCATGY	1 cut(s)	908
BstSCI	CCNGG	5 cut(s)	357, 452, 970, 1327, 1725
BstSFI	CTRYAG	5 cut(s)	624, 899, 1260, 1590, 1647
BstUI	CGCG	2 cut(s)	76, 684
BstV1I	GCAGC	2 cut(s)	552, 913
BstV2I	GAAGAC	3 cut(s)	688, 1556, 1778
BstX2I	RGATCY	2 cut(s)	1183, 1684
BstYI	RGATCY	2 cut(s)	1183, 1684
BstZ17I	GTATAC	1 cut(s)	1348
BstZI	CGGCCG	1 cut(s)	141
BsuI	GTATCC	2 cut(s)	1152, 1325
BtgI	CCRYGG	2 cut(s)	549, 1192
BtgZI	GCGATG	1 cut(s)	540
BtrI	CACGTC	1 cut(s)	46
BtsCI	GGATG	2 cut(s)	518, 856
BtsI	GCAGTG	3 cut(s)	57, 1515, 1611
BtsIMutI	CAGTG	7 cut(s)	57, 161, 304, 441, 1050, 1515, 1611
BveI	ACCTGC	3 cut(s)	521, 553, 1786
Cac8I	GCNNGC	5 cut(s)	645, 803, 893, 906, 1671
CaiI	CAGNNNCTG	2 cut(s)	565, 718
CfoI	GCGC	2 cut(s)	76, 686
Cfr10I	RCCGGY	1 cut(s)	303
Cfr13I	GGNCC	6 cut(s)	56, 79, 113, 244, 677, 722
Csp6I	GTAC	4 cut(s)	130, 432, 991, 1538
CspCI	CAANNNNNGTGG	4 cut(s)	621, 656, 1351, 1386
CviAII	CATG	7 cut(s)	70, 490, 550, 905, 929, 1134, 1169
CviQI	GTAC	4 cut(s)	130, 432, 991, 1538
DdeI	CTNAG	4 cut(s)	594, 1076, 1610, 1814
DpnI	GATC	5 cut(s)	204, 364, 1185, 1242, 1686
DpnII	GATC	5 cut(s)	202, 362, 1183, 1240, 1684
DraI	TTTAAA	1 cut(s)	870
DraIII	CACNNNGTG	1 cut(s)	1157
EaeI	YGGCCR	6 cut(s)	141, 301, 504, 1272, 1408, 1473
EagI	CGGCCG	1 cut(s)	141
EclXI	CGGCCG	1 cut(s)	141
Eco130I	CCWWGG	4 cut(s)	82, 549, 1476, 1782
Eco147I	AGGCCT	1 cut(s)	581
Eco32I	GATATC	1 cut(s)	1088
Eco47I	GGWCC	5 cut(s)	56, 79, 244, 677, 722
Eco52I	CGGCCG	1 cut(s)	141
Eco57I	CTGAAG	1 cut(s)	1673
EcoO109I	RGGNCCY	3 cut(s)	56, 79, 722
EcoRI	GAATTC	1 cut(s)	1000
EcoRII	CCWGG	4 cut(s)	357, 452, 970, 1327
EcoRV	GATATC	1 cut(s)	1088
EcoT14I	CCWWGG	4 cut(s)	82, 549, 1476, 1782
EcoT22I	ATGCAT	1 cut(s)	820
ErhI	CCWWGG	4 cut(s)	82, 549, 1476, 1782
FaeI	CATG	7 cut(s)	73, 493, 553, 908, 932, 1137, 1172
FatI	CATG	7 cut(s)	69, 489, 549, 904, 928, 1133, 1168
FauI	CCCGC	1 cut(s)	69
FblI	GTMKAC	1 cut(s)	1347
Fnu4HI	GCNGC	3 cut(s)	566, 902, 1411
FokI	GGATG	2 cut(s)	505, 843
Fsp4HI	GCNGC	3 cut(s)	566, 902, 1411
FspBI	CTAG	4 cut(s)	83, 485, 1541, 1825
GlaI	GCGC	2 cut(s)	75, 685
GluI	GCNGC	3 cut(s)	566, 902, 1411
GsaI	CCCAGC	2 cut(s)	114, 828
HapII	CCGG	5 cut(s)	34, 247, 304, 1275, 1726
HhaI	GCGC	2 cut(s)	76, 686
Hin1II	CATG	7 cut(s)	73, 493, 553, 908, 932, 1137, 1172
Hin6I	GCGC	2 cut(s)	74, 684
HinP1I	GCGC	2 cut(s)	74, 684
HincII	GTYRAC	1 cut(s)	31
HindII	GTYRAC	1 cut(s)	31
HindIII	AAGCTT	1 cut(s)	893
HinfI	GANTC	9 cut(s)	137, 259, 326, 354, 421, 1147, 1177, 1197, 1552
HpaII	CCGG	5 cut(s)	34, 247, 304, 1275, 1726
HphI	GGTGA	4 cut(s)	268, 323, 1169, 1525
Hpy166II	GTNNAC	5 cut(s)	31, 680, 991, 1348, 1538
Hpy8I	GTNNAC	5 cut(s)	31, 680, 991, 1348, 1538
HpyAV	CCTTC	3 cut(s)	645, 735, 761
HpyCH4III	ACNGT	4 cut(s)	187, 436, 838, 1193
HpyCH4IV	ACGT	2 cut(s)	45, 1633
HpyF10VI	GCNNNNNNNGC	9 cut(s)	47, 71, 149, 398, 565, 892, 901, 944, 1793
HpyF3I	CTNAG	4 cut(s)	594, 1076, 1610, 1814
HpySE526I	ACGT	2 cut(s)	45, 1633
Hsp92II	CATG	7 cut(s)	73, 493, 553, 908, 932, 1137, 1172
HspAI	GCGC	2 cut(s)	74, 684
Kpn2I	TCCGGA	1 cut(s)	246
Kzo9I	GATC	5 cut(s)	202, 362, 1183, 1240, 1684
LmnI	GCTCC	4 cut(s)	290, 1310, 1330, 1505
Lsp1109I	GCAGC	2 cut(s)	552, 913
LweI	GCATC	5 cut(s)	517, 527, 765, 805, 1201
MaeI	CTAG	4 cut(s)	83, 485, 1541, 1825
MaeII	ACGT	2 cut(s)	45, 1633
MaeIII	GTNAC	5 cut(s)	806, 832, 1465, 1513, 1753
MalI	GATC	5 cut(s)	204, 364, 1185, 1242, 1686
MboI	GATC	5 cut(s)	202, 362, 1183, 1240, 1684
MboII	GAAGA	6 cut(s)	262, 363, 688, 1561, 1679, 1783
MflI	RGATCY	2 cut(s)	1183, 1684
MhlI	GDGCHC	1 cut(s)	1611
MlsI	TGGCCA	2 cut(s)	506, 1475
MluNI	TGGCCA	2 cut(s)	506, 1475
MlyI	GAGTC	4 cut(s)	146, 348, 1206, 1546
MmeI	TCCRAC	1 cut(s)	1285
Mox20I	TGGCCA	2 cut(s)	506, 1475
Mph1103I	ATGCAT	1 cut(s)	820
MroI	TCCGGA	1 cut(s)	246
MroXI	GAANNNNTTC	1 cut(s)	1293
MscI	TGGCCA	2 cut(s)	506, 1475
MseI	TTAA	4 cut(s)	404, 756, 869, 1733
MslI	CAYNNNNRTG	1 cut(s)	861
Msp20I	TGGCCA	2 cut(s)	506, 1475
MspI	CCGG	5 cut(s)	34, 247, 304, 1275, 1726
MspR9I	CCNGG	5 cut(s)	359, 454, 972, 1329, 1727
MvaI	CCWGG	4 cut(s)	359, 454, 972, 1329
MvnI	CGCG	2 cut(s)	76, 684
MwoI	GCNNNNNNNGC	9 cut(s)	47, 71, 149, 398, 565, 892, 901, 944, 1793
NciI	CCSGG	1 cut(s)	1727
NcoI	CCATGG	1 cut(s)	549
NdeII	GATC	5 cut(s)	202, 362, 1183, 1240, 1684
NlaIII	CATG	7 cut(s)	73, 493, 553, 908, 932, 1137, 1172
NlaIV	GGNNCC	7 cut(s)	57, 80, 189, 245, 470, 723, 1326
NmuCI	GTSAC	3 cut(s)	832, 1513, 1753
NsiI	ATGCAT	1 cut(s)	820
NspI	RCATGY	1 cut(s)	908
PaeI	GCATGC	1 cut(s)	908
PaqCI	CACCTGC	3 cut(s)	521, 553, 1786
PceI	AGGCCT	1 cut(s)	581
PdmI	GAANNNNTTC	1 cut(s)	1293
PfeI	GAWTC	5 cut(s)	259, 326, 421, 1147, 1177
PflMI	CCANNNNNTGG	2 cut(s)	228, 1193
PfoI	TCCNGGA	2 cut(s)	970, 1327
PkrI	GCNGC	3 cut(s)	567, 903, 1412
PleI	GAGTC	4 cut(s)	145, 348, 1205, 1546
PpsI	GAGTC	4 cut(s)	145, 348, 1205, 1546
PpuMI	RGGWCCY	3 cut(s)	56, 79, 722
Psp5II	RGGWCCY	3 cut(s)	56, 79, 722
Psp6I	CCWGG	4 cut(s)	357, 452, 970, 1327
PspFI	CCCAGC	2 cut(s)	110, 824
PspGI	CCWGG	4 cut(s)	357, 452, 970, 1327
PspN4I	GGNNCC	7 cut(s)	57, 80, 189, 245, 470, 723, 1326
PspPI	GGNCC	6 cut(s)	56, 79, 113, 244, 677, 722
PspPPI	RGGWCCY	3 cut(s)	56, 79, 722
PstI	CTGCAG	4 cut(s)	903, 1264, 1594, 1651
PstNI	CAGNNNCTG	2 cut(s)	565, 718
PsuI	RGATCY	2 cut(s)	1183, 1684
RsaI	GTAC	4 cut(s)	131, 433, 992, 1539
RsaNI	GTAC	4 cut(s)	130, 432, 991, 1538
RseI	CAYNNNNRTG	1 cut(s)	861
SaqAI	TTAA	4 cut(s)	404, 756, 869, 1733
SatI	GCNGC	3 cut(s)	566, 902, 1411
Sau3AI	GATC	5 cut(s)	202, 362, 1183, 1240, 1684
Sau96I	GGNCC	6 cut(s)	56, 79, 113, 244, 677, 722
SchI	GAGTC	4 cut(s)	146, 348, 1206, 1546
ScrFI	CCNGG	5 cut(s)	359, 454, 972, 1329, 1727
SduI	GDGCHC	1 cut(s)	1611
SfaNI	GCATC	5 cut(s)	517, 527, 765, 805, 1201
SfcI	CTRYAG	5 cut(s)	624, 899, 1260, 1590, 1647
SinI	GGWCC	5 cut(s)	56, 79, 244, 677, 722
SmiMI	CAYNNNNRTG	1 cut(s)	861
SphI	GCATGC	1 cut(s)	908
SseBI	AGGCCT	1 cut(s)	581
SsiI	CCGC	2 cut(s)	76, 1411
SspI	AATATT	3 cut(s)	271, 760, 782
SspMI	CTAG	4 cut(s)	83, 485, 1541, 1825
StuI	AGGCCT	1 cut(s)	581
StyD4I	CCNGG	5 cut(s)	357, 452, 970, 1327, 1725
StyI	CCWWGG	4 cut(s)	82, 549, 1476, 1782
TaaI	ACNGT	4 cut(s)	187, 436, 838, 1193
TaiI	ACGT	2 cut(s)	48, 1636
TaqI	TCGA	1 cut(s)	365
TatI	WGTACW	3 cut(s)	431, 990, 1537
TauI	GCSGC	1 cut(s)	1413
TfiI	GAWTC	5 cut(s)	259, 326, 421, 1147, 1177
Tru1I	TTAA	4 cut(s)	404, 756, 869, 1733
Tru9I	TTAA	4 cut(s)	404, 756, 869, 1733
TscAI	CASTG	7 cut(s)	57, 168, 304, 441, 1057, 1515, 1611
TseFI	GTSAC	3 cut(s)	832, 1513, 1753
TseI	GCWGC	2 cut(s)	565, 901
Tsp45I	GTSAC	3 cut(s)	832, 1513, 1753
TspDTI	ATGAA	5 cut(s)	627, 1154, 1404, 1631, 1716
TspGWI	ACGGA	1 cut(s)	1107
TspRI	CASTG	7 cut(s)	57, 168, 304, 441, 1057, 1515, 1611
Van91I	CCANNNNNTGG	2 cut(s)	228, 1193
VpaK11BI	GGWCC	5 cut(s)	56, 79, 244, 677, 722
XapI	RAATTY	5 cut(s)	154, 225, 965, 1000, 1161
XceI	RCATGY	1 cut(s)	908
XmaJI	CCTAGG	1 cut(s)	82
XmiI	GTMKAC	1 cut(s)	1347
XmnI	GAANNNNTTC	1 cut(s)	1293
XspI	CTAG	4 cut(s)	83, 485, 1541, 1825
Zsp2I	ATGCAT	1 cut(s)	820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.