Prupe.1G574100_v2.0.a1

protein At3g15000, mitochondrial-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
46777441 .. 46780804
3364 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G574100.2

Sequence Viewer

Length: 1605 bp
ATGGCGCTGAGCTCTCTTCGAATCCGCCGAACCCTCTGCGCCCTCTCAAACCTCCATCGCACTCTTTCTGCAACCTCTGCACTGTCATTTTCACACTCTTCTTCCTCTCCTCTGCTCAATGGCCCCACCTCAGTACAATCTCCTGCATCGCACCCGAAATCCTGGACCCTCCTCCTCCATTCTCGGACGTTCAGGTCGTCCTCGCTCTCTTCTGCTCGATCGGCGCCGTACGACAACAACCAAAACGAGAAGATGGACCCCAATACGGTACTGTTCGAAGGGTGCGATTACAACCACTGGCTCATTGTCATGGATTACCCGCAAACCAACCGGCCTCCGGCTGAGGAGATGGTCAGAGCTTATGAGGAAACCTGTGCTAAAGGCTTGAACATCAGTGTGGAAGAGGCAAAACAGAAGATGTATGCTTGTAGCACTACAACGTACACAGGCTTTCAGGTCGTAATGTCTGAGGAAGAGTCACAGAAGTTCGAAGGTTTACCTGGAGTTATTTTTGTGTTGCCAGATTCTTACATTGACCCACAAAACAAGGAATATGGAGGAGACAAATACGTTAATGGTACAATCTATCCAAGACCACCCCCAGTTCATCATGGAAGACAGCAGGGGAGATACCACGATCGTAACAGAAATCCTGACCCACCAAGATACAATGGGCAAGGACCGACGCCTAATCAGCAAGGGAATCCCTCCTATAATCTGAAGGGGCCTATGCAAGATAGAGGGAACTATGGACCTTCACAAACTTATGGCTCACAAAGACAAGGAGATAATAGAGGCCCTTTACCAGTGAATACCCCTGGAGGGAGGGATGCGTATCAGCCAGGGAGAGATCCAGTACCTTCATATCAGGGCAATTATAACCAAGCAGGGCAACAAAATTATCATCCCCAAGAACAAAGGAACTTCCCAGAAGGAGATCAGAGGAATTATGCCCCTCCTGGTCCGGTGGGATTTAGGCGAGATGATAGGAATTATGTTCCCCCACAAACTGAAACTCATGGACAAGGTTTGGGTGGATTTCAAGGCCAGGGAACAGCTAGAGCTTATGGGCAAGGACCGAGCTCCGGAGCTTATGGGCAAGGACCGAGCTCCGGAGTTTATGGGCAAGGACCGAACTCAGGAGCTTATGGGCAAGGACCGAGCTCCGGAGCTTATGGGCAAGGACCGAGCTCCGGAGCTTATGGGCAAGGACCGAGCTCCGGAGCTTATGGGCAAGGACCGAGCTCCGGAGCTTATGGGCAAGAAGGACAGAGGTCCGGAGCTTATGGGCAAGAAGGACAGAGGTCCGGAGCATATGGGCAAGAAGGACAGAGGTCTGGAGCTTATGGGCAAGAAGGACAGAGGTCAGTAGCCTTTGGCCAAGGACCGAGCTCCGGAGCATTTGGCCAAGGACCAAGCTCTGGACCCTTTGGTCAAGTAACAGAAGTAACAGCTTCTGGTAATGGGCAGAGCTACCCTGGGTACGGAGGAGATCAGAGGTTTTCACAAGGGGAGCAGAGGAACGTGCAAGGTGAACAAAGCAACTATGCACCCACAGGACAGACAGGAATTGAGCAAGTAAGAGATCCACTGTTTAGTAATTGA

Protein Analysis

535

Amino Acids

57.22

Weight (kDa)

7.15

Isoelectric Point (pI)

52.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 879
AasI GACNNNNNNGTC 2 cut(s) 193, 1431
AccB1I GGYRCC 1 cut(s) 223
AccB7I CCANNNNNTGG 1 cut(s) 1421
AccIII TCCGGA 9 cut(s) 1085, 1112, 1166, 1193, 1220, 1247, 1277, 1307, 1394
AciI CCGC 2 cut(s) 25, 320
AclWI GGATC 2 cut(s) 845, 1580
AcoI YGGCCR 2 cut(s) 1378, 1405
AcuI CTGAAG 1 cut(s) 740
AcyI GRCGYC 2 cut(s) 224, 686
AfaI GTAC 7 cut(s) 135, 230, 270, 443, 580, 858, 1484
AgsI TTSAA 2 cut(s) 388, 1043
AjnI CCWGG 7 cut(s) 161, 499, 817, 841, 958, 1047, 1477
Alw21I GWGCWC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
Alw26I GTCTC 1 cut(s) 555
AlwI GGATC 2 cut(s) 845, 1580
AlwNI CAGNNNCTG 1 cut(s) 1457
Aor13HI TCCGGA 9 cut(s) 1085, 1112, 1166, 1193, 1220, 1247, 1277, 1307, 1394
AoxI GGCC 7 cut(s) 121, 332, 725, 796, 1045, 1378, 1405
AspLEI GCGC 3 cut(s) 7, 41, 226
AsuHPI GGTGA 1 cut(s) 1544
AsuII TTCGAA 3 cut(s) 19, 276, 489
BalI TGGCCA 2 cut(s) 1380, 1407
BanI GGYRCC 1 cut(s) 223
BanII GRGCYC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
BbsI GAAGAC 1 cut(s) 622
Bbv12I GWGCWC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
BbvCI CCTCAGC 1 cut(s) 342
BccI CCATC 3 cut(s) 63, 247, 343
BceAI ACGGC 1 cut(s) 211
BcgI CGANNNNNNTGC 2 cut(s) 18, 52
BciT130I CCWGG 7 cut(s) 163, 501, 819, 843, 960, 1049, 1479
BcoDI GTCTC 1 cut(s) 555
BfaI CTAG 1 cut(s) 1059
BfoI RGCGCY 2 cut(s) 8, 227
BlpI GCTNAGC 1 cut(s) 8
Bme1390I CCNGG 7 cut(s) 163, 501, 819, 843, 960, 1049, 1479
BmiI GGNNCC 6 cut(s) 124, 167, 225, 258, 726, 1426
BmrFI CCNGG 7 cut(s) 163, 501, 819, 843, 960, 1049, 1479
BmrI ACTGGG 1 cut(s) 596
BmsI GCATC 2 cut(s) 155, 820
BmuI ACTGGG 1 cut(s) 596
BoxI GACNNNNGTC 4 cut(s) 1273, 1303, 1333, 1363
BpiI GAAGAC 1 cut(s) 622
BpmI CTGGAG 3 cut(s) 522, 840, 1359
Bpu10I CCTNAGC 1 cut(s) 342
Bpu1102I GCTNAGC 1 cut(s) 8
Bpu14I TTCGAA 3 cut(s) 19, 276, 489
BsaBI GATNNNNATC 1 cut(s) 834
BsaHI GRCGYC 2 cut(s) 224, 686
BsaJI CCNNGG 7 cut(s) 817, 842, 1048, 1381, 1408, 1477, 1478
Bse118I RCCGGY 1 cut(s) 330
Bse1I ACTGG 4 cut(s) 302, 602, 806, 854
Bse8I GATNNNNATC 1 cut(s) 834
BseAI TCCGGA 9 cut(s) 1085, 1112, 1166, 1193, 1220, 1247, 1277, 1307, 1394
BseBI CCWGG 7 cut(s) 163, 501, 819, 843, 960, 1049, 1479
BseDI CCNNGG 7 cut(s) 817, 842, 1048, 1381, 1408, 1477, 1478
BseGI GGATG 2 cut(s) 835, 904
BseJI GATNNNNATC 1 cut(s) 834
BseMII CTCAG 4 cut(s) 144, 333, 459, 1152
BseNI ACTGG 4 cut(s) 302, 602, 806, 854
BseRI GAGGAG 6 cut(s) 99, 161, 164, 359, 573, 1503
BsgI GTGCAG 1 cut(s) 63
Bsh1285I CGRYCG 2 cut(s) 221, 640
BshFI GGCC 7 cut(s) 123, 334, 727, 798, 1047, 1380, 1407
BshNI GGYRCC 1 cut(s) 223
BsiEI CGRYCG 2 cut(s) 221, 640
BsiHKAI GWGCWC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
BsiWI CGTACG 1 cut(s) 228
BsmAI GTCTC 1 cut(s) 555
BsnI GGCC 7 cut(s) 123, 334, 727, 798, 1047, 1380, 1407
Bsp119I TTCGAA 3 cut(s) 19, 276, 489
Bsp1286I GDGCHC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
Bsp13I TCCGGA 9 cut(s) 1085, 1112, 1166, 1193, 1220, 1247, 1277, 1307, 1394
Bsp143I GATC 6 cut(s) 218, 637, 850, 937, 1492, 1585
Bsp1720I GCTNAGC 1 cut(s) 8
BspACI CCGC 2 cut(s) 25, 320
BspANI GGCC 7 cut(s) 123, 334, 727, 798, 1047, 1380, 1407
BspCNI CTCAG 4 cut(s) 143, 334, 460, 1151
BspEI TCCGGA 9 cut(s) 1085, 1112, 1166, 1193, 1220, 1247, 1277, 1307, 1394
BspLI GGNNCC 6 cut(s) 124, 167, 225, 258, 726, 1426
BspPI GGATC 2 cut(s) 845, 1580
BspT104I TTCGAA 3 cut(s) 19, 276, 489
BspT107I GGYRCC 1 cut(s) 223
BsrFI RCCGGY 1 cut(s) 330
BsrI ACTGG 4 cut(s) 302, 602, 806, 854
BssAI RCCGGY 1 cut(s) 330
BssECI CCNNGG 7 cut(s) 817, 842, 1048, 1381, 1408, 1477, 1478
BssMI GATC 6 cut(s) 218, 637, 850, 937, 1492, 1585
BssNI GRCGYC 2 cut(s) 224, 686
BssT1I CCWWGG 2 cut(s) 1381, 1408
Bst2UI CCWGG 7 cut(s) 163, 501, 819, 843, 960, 1049, 1479
Bst4CI ACNGT 4 cut(s) 84, 268, 273, 1593
Bst6I CTCTTC 5 cut(s) 21, 103, 214, 396, 468
BstACI GRCGYC 2 cut(s) 224, 686
BstAPI GCANNNNNTGC 1 cut(s) 77
BstBI TTCGAA 3 cut(s) 19, 276, 489
BstDEI CTNAG 5 cut(s) 8, 130, 342, 468, 1138
BstF5I GGATG 2 cut(s) 835, 904
BstH2I RGCGCY 2 cut(s) 8, 227
BstHHI GCGC 3 cut(s) 7, 41, 226
BstKTI GATC 6 cut(s) 221, 640, 853, 940, 1495, 1588
BstMAI GTCTC 1 cut(s) 555
BstMBI GATC 6 cut(s) 218, 637, 850, 937, 1492, 1585
BstMCI CGRYCG 2 cut(s) 221, 640
BstMWI GCNNNNNNNGC 3 cut(s) 77, 221, 694
BstNI CCWGG 7 cut(s) 163, 501, 819, 843, 960, 1049, 1479
BstPAI GACNNNNGTC 4 cut(s) 1273, 1303, 1333, 1363
BstSCI CCNGG 7 cut(s) 161, 499, 817, 841, 958, 1047, 1477
BstV2I GAAGAC 1 cut(s) 622
BstX2I RGATCY 2 cut(s) 850, 1585
BstYI RGATCY 2 cut(s) 850, 1585
BsuRI GGCC 7 cut(s) 123, 334, 727, 798, 1047, 1380, 1407
BtgZI GCGATG 2 cut(s) 41, 132
BtsCI GGATG 2 cut(s) 835, 904
BtsIMutI CAGTG 5 cut(s) 80, 295, 400, 813, 1589
CaiI CAGNNNCTG 1 cut(s) 1457
CfoI GCGC 3 cut(s) 7, 41, 226
Cfr10I RCCGGY 1 cut(s) 330
CseI GACGC 1 cut(s) 694
Csp6I GTAC 7 cut(s) 134, 229, 269, 442, 579, 857, 1483
CviAII CATG 3 cut(s) 310, 611, 1019
CviQI GTAC 7 cut(s) 134, 229, 269, 442, 579, 857, 1483
DdeI CTNAG 5 cut(s) 8, 130, 342, 468, 1138
DinI GGCGCC 1 cut(s) 225
DpnI GATC 6 cut(s) 220, 639, 852, 939, 1494, 1587
DpnII GATC 6 cut(s) 218, 637, 850, 937, 1492, 1585
DrdI GACNNNNNNGTC 2 cut(s) 193, 1431
DseDI GACNNNNNNGTC 2 cut(s) 193, 1431
EaeI YGGCCR 2 cut(s) 1378, 1405
Eam1104I CTCTTC 5 cut(s) 21, 103, 214, 396, 468
EarI CTCTTC 5 cut(s) 21, 103, 214, 396, 468
EciI GGCGGA 1 cut(s) 14
Ecl136II GAGCTC 8 cut(s) 12, 1083, 1110, 1164, 1191, 1218, 1245, 1392
Eco130I CCWWGG 2 cut(s) 1381, 1408
Eco24I GRGCYC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
Eco53kI GAGCTC 8 cut(s) 12, 1083, 1110, 1164, 1191, 1218, 1245, 1392
Eco57I CTGAAG 1 cut(s) 740
EcoICRI GAGCTC 8 cut(s) 12, 1083, 1110, 1164, 1191, 1218, 1245, 1392
EcoO109I RGGNCCY 2 cut(s) 725, 797
EcoRII CCWGG 7 cut(s) 161, 499, 817, 841, 958, 1047, 1477
EcoT14I CCWWGG 2 cut(s) 1381, 1408
EcoT38I GRGCYC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
EgeI GGCGCC 1 cut(s) 225
EheI GGCGCC 1 cut(s) 225
ErhI CCWWGG 2 cut(s) 1381, 1408
FaeI CATG 3 cut(s) 313, 614, 1022
FatI CATG 3 cut(s) 309, 610, 1018
FauI CCCGC 1 cut(s) 327
FauNDI CATATG 1 cut(s) 1315
FokI GGATG 2 cut(s) 842, 891
FriOI GRGCYC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
FspBI CTAG 1 cut(s) 1059
GlaI GCGC 3 cut(s) 6, 40, 225
GsuI CTGGAG 3 cut(s) 522, 840, 1359
HaeII RGCGCY 2 cut(s) 8, 227
HaeIII GGCC 7 cut(s) 123, 334, 727, 798, 1047, 1380, 1407
HgaI GACGC 1 cut(s) 694
HhaI GCGC 3 cut(s) 7, 41, 226
Hin1I GRCGYC 2 cut(s) 224, 686
Hin1II CATG 3 cut(s) 313, 614, 1022
Hin6I GCGC 3 cut(s) 5, 39, 224
HinP1I GCGC 3 cut(s) 5, 39, 224
HinfI GANTC 4 cut(s) 21, 476, 524, 703
HphI GGTGA 1 cut(s) 1544
Hpy166II GTNNAC 3 cut(s) 444, 497, 1535
Hpy188I TCNGA 6 cut(s) 186, 356, 469, 720, 942, 1497
Hpy8I GTNNAC 3 cut(s) 444, 497, 1535
Hpy99I CGWCG 1 cut(s) 688
HpyCH4III ACNGT 4 cut(s) 84, 268, 273, 1593
HpyCH4IV ACGT 4 cut(s) 188, 440, 570, 1524
HpyCH4V TGCA 6 cut(s) 71, 80, 146, 733, 1528, 1550
HpyF10VI GCNNNNNNNGC 3 cut(s) 77, 221, 694
HpyF3I CTNAG 5 cut(s) 8, 130, 342, 468, 1138
HpySE526I ACGT 4 cut(s) 188, 440, 570, 1524
Hsp92I GRCGYC 2 cut(s) 224, 686
Hsp92II CATG 3 cut(s) 313, 614, 1022
HspAI GCGC 3 cut(s) 5, 39, 224
KasI GGCGCC 1 cut(s) 223
Kpn2I TCCGGA 9 cut(s) 1085, 1112, 1166, 1193, 1220, 1247, 1277, 1307, 1394
Kzo9I GATC 6 cut(s) 218, 637, 850, 937, 1492, 1585
LweI GCATC 2 cut(s) 155, 820
MaeI CTAG 1 cut(s) 1059
MaeII ACGT 4 cut(s) 188, 440, 570, 1524
MaeIII GTNAC 4 cut(s) 477, 641, 1438, 1447
MalI GATC 6 cut(s) 220, 639, 852, 939, 1494, 1587
MboI GATC 6 cut(s) 218, 637, 850, 937, 1492, 1585
MboII GAAGA 9 cut(s) 8, 90, 93, 201, 262, 413, 427, 485, 627
MflI RGATCY 2 cut(s) 850, 1585
MhlI GDGCHC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
MlsI TGGCCA 2 cut(s) 1380, 1407
MluCI AATT 6 cut(s) 874, 898, 946, 991, 1569, 1600
MluNI TGGCCA 2 cut(s) 1380, 1407
Mly113I GGCGCC 1 cut(s) 224
MlyI GAGTC 1 cut(s) 485
Mox20I TGGCCA 2 cut(s) 1380, 1407
MroI TCCGGA 9 cut(s) 1085, 1112, 1166, 1193, 1220, 1247, 1277, 1307, 1394
MscI TGGCCA 2 cut(s) 1380, 1407
MseI TTAA 1 cut(s) 573
MslI CAYNNNNRTG 2 cut(s) 308, 395
Msp20I TGGCCA 2 cut(s) 1380, 1407
MspR9I CCNGG 7 cut(s) 163, 501, 819, 843, 960, 1049, 1479
MvaI CCWGG 7 cut(s) 163, 501, 819, 843, 960, 1049, 1479
MwoI GCNNNNNNNGC 3 cut(s) 77, 221, 694
NarI GGCGCC 1 cut(s) 224
NdeI CATATG 1 cut(s) 1315
NdeII GATC 6 cut(s) 218, 637, 850, 937, 1492, 1585
NlaIII CATG 3 cut(s) 313, 614, 1022
NlaIV GGNNCC 6 cut(s) 124, 167, 225, 258, 726, 1426
NmuCI GTSAC 1 cut(s) 477
NspV TTCGAA 3 cut(s) 19, 276, 489
PasI CCCWGGG 1 cut(s) 1478
PcsI WCGNNNNNNNCGW 3 cut(s) 25, 194, 282
PfeI GAWTC 3 cut(s) 21, 524, 703
Pfl23II CGTACG 1 cut(s) 228
PflMI CCANNNNNTGG 1 cut(s) 1421
PfoI TCCNGGA 1 cut(s) 161
Ple19I CGATCG 2 cut(s) 221, 640
PleI GAGTC 1 cut(s) 484
PluTI GGCGCC 1 cut(s) 227
PpsI GAGTC 1 cut(s) 484
PshAI GACNNNNGTC 4 cut(s) 1273, 1303, 1333, 1363
PsiI TTATAA 1 cut(s) 879
Psp124BI GAGCTC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
Psp6I CCWGG 7 cut(s) 161, 499, 817, 841, 958, 1047, 1477
PspGI CCWGG 7 cut(s) 161, 499, 817, 841, 958, 1047, 1477
PspLI CGTACG 1 cut(s) 228
PspN4I GGNNCC 6 cut(s) 124, 167, 225, 258, 726, 1426
PstNI CAGNNNCTG 1 cut(s) 1457
PsuI RGATCY 2 cut(s) 850, 1585
PvuI CGATCG 2 cut(s) 221, 640
RsaI GTAC 7 cut(s) 135, 230, 270, 443, 580, 858, 1484
RsaNI GTAC 7 cut(s) 134, 229, 269, 442, 579, 857, 1483
RseI CAYNNNNRTG 2 cut(s) 308, 395
SacI GAGCTC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
SaqAI TTAA 1 cut(s) 573
Sau3AI GATC 6 cut(s) 218, 637, 850, 937, 1492, 1585
SchI GAGTC 1 cut(s) 485
ScrFI CCNGG 7 cut(s) 163, 501, 819, 843, 960, 1049, 1479
SduI GDGCHC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
SfaNI GCATC 2 cut(s) 155, 820
SfoI GGCGCC 1 cut(s) 225
SfuI TTCGAA 3 cut(s) 19, 276, 489
SmiMI CAYNNNNRTG 2 cut(s) 308, 395
Sse9I AATT 6 cut(s) 874, 898, 946, 991, 1569, 1600
SsiI CCGC 2 cut(s) 25, 320
SspDI GGCGCC 1 cut(s) 223
SspMI CTAG 1 cut(s) 1059
SstI GAGCTC 8 cut(s) 14, 1085, 1112, 1166, 1193, 1220, 1247, 1394
StyD4I CCNGG 7 cut(s) 161, 499, 817, 841, 958, 1047, 1477
StyI CCWWGG 2 cut(s) 1381, 1408
TaaI ACNGT 4 cut(s) 84, 268, 273, 1593
TaiI ACGT 4 cut(s) 191, 443, 573, 1527
TaqI TCGA 4 cut(s) 19, 217, 276, 489
TaqII GACCGA 9 cut(s) 697, 1093, 1120, 1147, 1174, 1201, 1228, 1255, 1402
TasI AATT 6 cut(s) 874, 898, 946, 991, 1569, 1600
TatI WGTACW 1 cut(s) 133
TfiI GAWTC 3 cut(s) 21, 524, 703
Tru1I TTAA 1 cut(s) 573
Tru9I TTAA 1 cut(s) 573
TscAI CASTG 5 cut(s) 87, 302, 400, 813, 1596
TseFI GTSAC 1 cut(s) 477
Tsp45I GTSAC 1 cut(s) 477
TspDTI ATGAA 2 cut(s) 596, 852
TspGWI ACGGA 1 cut(s) 1500
TspRI CASTG 5 cut(s) 87, 302, 400, 813, 1596
Van91I CCANNNNNTGG 1 cut(s) 1421
XspI CTAG 1 cut(s) 1059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.