pycom15g37970

protein At3g15000, mitochondrial-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
37880231 .. 37882500
2270 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g37970.2

Sequence Viewer

Length: 1425 bp
ATGGCGCTGAGCTCTCTCCGCCTCCGCCGAACCCTAAGCGGTCTCTCCACCCTCCACCGCTCTCTCTCCGCAACCTCCGCACTCTCAGCTCTACACTCCTCTTCCTCTCCTCTGCTTCGCGCCCCCACCTCCGAAAAATCCCCTCCATCGCCGCAACAGTCCTGGAGGCTCCTCCTCCAGTCTCGGACTTTCAGGTCGTCGTCGGTCTCCCCCGCACGGCCGTCGTCGTACGGAAACAACCAAAAGGACGAGATTGACCCGCATACGGTACTGTTCGAAGGGTGCGATTACAACCACTGGCTGATCGTCATGGATTTCCCGAGAGACAACAAGCCTCCGGCTGAAGAAATGATCAGGAATTATGAGGAGACCTGTGCTAAGGGCTTGAACATCAGTGTGGAAGAGGCAAAAAAGAAGATGTATGCTTGTAGCACTACAACATATACAGGCTTTCAGGTTCAGATGTCCGAGGAAGAGTCACAGAAGTTCGAAGGTTTACCTGGAGTAGTGTTTGTGTTGCCAGATTCTTACATTGATGTACAGAACAAGGAGTATGGAGGAGACAAATACATTAATGGTACAATCATACCAAGACCACCCCCAGTTCAGTATGGAAGGCAGCAGGGCGGAAGATTCCGTGATAATAACAGGAACCGTGACCAACAAAGATATGATCAGCAACGACCATCGTATAATCCGCCAGGCAATCCCTCCTATAGTCAACAGGGTGCTATGCAAGGTGGAGGGAACTATGAGGCATCACAAAATTATCCACAACAAAATTATAGGTCACCAAGACAAGGAGAGAACACAGGTCCTATTCCAGTGAATACCCCTGGAACGAGGGATGCTTATCAGCCAGGCAGAGATCCAGTACCTTCATATCAGGGCAATTACAACCAAGGTGGGCAGCAAGGTTATCGTCCTGAAGAACACAGGAACTTCCCACAAGGAGATCAGAGGAATTATGCTCCTCCTGGTCAGCAGGGATTTAGGGGAGAAAATAGGAATTATGGCCCCCAACATGCTGATACTAGTGGACAAGGTTTGAGTGGATTTCAAGGACAGGGAACAGCTGGAGCTTATGGACAAGGGCCGAGCTCTGGAGCTTATGGGCAAGGGCCGAGCTCTGGAGCTTATGGGCAAGGACCGAGCACTGGAGCTTATGGGCAAGGACCGAGCACTGGCGCTTATGGGCAAGGACCGAGCACTGGATCTTATGGACAAGGACCGAGCACTGGATCTTATGGACAAGGACCGAGCACTGTAGCTTATGGACAAGAACCGAACCCTGGGGCTTATGGCCAAGGACCGACATCTGGTAATGGCCAGAGATACCCTGGGCATGGAGGAGATGACAGGTTCCAACAAAGTAACTATGCACCCGTGGGACAGACAGGGATTAACCAAGGGAAAAATTATTGA

Protein Analysis

475

Amino Acids

51.26

Weight (kDa)

8.69

Isoelectric Point (pI)

54.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 193
AccBSI CCGCTC 1 cut(s) 60
AccII CGCG 1 cut(s) 120
AclWI GGATC 3 cut(s) 863, 1222, 1249
AcoI YGGCCR 3 cut(s) 218, 1303, 1327
AcuI CTGAAG 2 cut(s) 363, 948
AfaI GTAC 5 cut(s) 230, 270, 540, 580, 876
AgsI TTSAA 2 cut(s) 388, 1061
AhlI ACTAGT 1 cut(s) 1034
AjnI CCWGG 8 cut(s) 161, 499, 700, 835, 859, 976, 1291, 1339
Alw21I GWGCWC 8 cut(s) 14, 1103, 1130, 1157, 1184, 1211, 1238, 1265
Alw26I GTCTC 6 cut(s) 47, 186, 211, 318, 362, 555
AlwI GGATC 3 cut(s) 863, 1222, 1249
Ama87I CYCGRG 1 cut(s) 319
AoxI GGCC 6 cut(s) 218, 1015, 1094, 1121, 1303, 1327
ApeKI GCWGC 2 cut(s) 619, 910
AseI ATTAAT 1 cut(s) 573
AspLEI GCGC 3 cut(s) 7, 122, 1190
AsuHPI GGTGA 1 cut(s) 783
AsuII TTCGAA 2 cut(s) 276, 489
AvaI CYCGRG 1 cut(s) 319
AvaII GGWCC 7 cut(s) 815, 1148, 1175, 1202, 1229, 1256, 1310
BalI TGGCCA 2 cut(s) 1305, 1329
BanII GRGCYC 3 cut(s) 14, 1103, 1130
Bbv12I GWGCWC 8 cut(s) 14, 1103, 1130, 1157, 1184, 1211, 1238, 1265
BbvI GCAGC 2 cut(s) 631, 922
BccI CCATC 2 cut(s) 154, 694
BceAI ACGGC 2 cut(s) 205, 233
BcgI CGANNNNNNTGC 4 cut(s) 204, 238, 902, 936
BciT130I CCWGG 8 cut(s) 163, 501, 702, 837, 861, 978, 1293, 1341
BclI TGATCA 2 cut(s) 351, 673
BcoDI GTCTC 6 cut(s) 47, 186, 211, 318, 362, 555
BcuI ACTAGT 1 cut(s) 1034
BfaI CTAG 1 cut(s) 1035
BfmI CTRYAG 2 cut(s) 715, 1266
BfoI RGCGCY 2 cut(s) 8, 1191
BisI GCNGC 3 cut(s) 152, 620, 911
BlpI GCTNAGC 1 cut(s) 8
BlsI GCNGC 3 cut(s) 153, 621, 912
Bme1390I CCNGG 8 cut(s) 163, 501, 702, 837, 861, 978, 1293, 1341
Bme18I GGWCC 7 cut(s) 815, 1148, 1175, 1202, 1229, 1256, 1310
BmeT110I CYCGRG 1 cut(s) 319
BmiI GGNNCC 4 cut(s) 170, 653, 1018, 1364
BmrFI CCNGG 8 cut(s) 163, 501, 702, 837, 861, 978, 1293, 1341
BmrI ACTGGG 1 cut(s) 596
BmsI GCATC 2 cut(s) 767, 838
BmuI ACTGGG 1 cut(s) 596
BpmI CTGGAG 7 cut(s) 161, 184, 522, 1098, 1125, 1152, 1179
Bpu10I CCTNAGC 2 cut(s) 35, 378
Bpu1102I GCTNAGC 1 cut(s) 8
Bpu14I TTCGAA 2 cut(s) 276, 489
BsaBI GATNNNNATC 1 cut(s) 852
BsaI GGTCTC 3 cut(s) 47, 211, 362
Bse1I ACTGG 9 cut(s) 178, 302, 602, 824, 872, 1162, 1189, 1216, 1243
Bse8I GATNNNNATC 1 cut(s) 852
BseBI CCWGG 8 cut(s) 163, 501, 702, 837, 861, 978, 1293, 1341
BseGI GGATG 1 cut(s) 853
BseJI GATNNNNATC 1 cut(s) 852
BseMII CTCAG 1 cut(s) 99
BseNI ACTGG 9 cut(s) 178, 302, 602, 824, 872, 1162, 1189, 1216, 1243
BseRI GAGGAG 8 cut(s) 88, 99, 161, 164, 380, 573, 963, 1365
BseX3I CGGCCG 1 cut(s) 218
BseXI GCAGC 2 cut(s) 631, 922
Bsh1236I CGCG 1 cut(s) 120
Bsh1285I CGRYCG 1 cut(s) 221
BshFI GGCC 6 cut(s) 220, 1017, 1096, 1123, 1305, 1329
BsiEI CGRYCG 1 cut(s) 221
BsiHKAI GWGCWC 8 cut(s) 14, 1103, 1130, 1157, 1184, 1211, 1238, 1265
BsiHKCI CYCGRG 1 cut(s) 319
BsiSI CCGG 1 cut(s) 338
BsiWI CGTACG 1 cut(s) 228
BslFI GGGAC 1 cut(s) 1404
BsmAI GTCTC 6 cut(s) 47, 186, 211, 318, 362, 555
BsmFI GGGAC 1 cut(s) 1404
BsnI GGCC 6 cut(s) 220, 1017, 1096, 1123, 1305, 1329
Bso31I GGTCTC 3 cut(s) 47, 211, 362
BsoBI CYCGRG 1 cut(s) 319
Bsp119I TTCGAA 2 cut(s) 276, 489
Bsp1286I GDGCHC 8 cut(s) 14, 1103, 1130, 1157, 1184, 1211, 1238, 1265
Bsp1407I TGTACA 1 cut(s) 538
Bsp143I GATC 7 cut(s) 303, 351, 673, 868, 955, 1214, 1241
Bsp1720I GCTNAGC 1 cut(s) 8
BspANI GGCC 6 cut(s) 220, 1017, 1096, 1123, 1305, 1329
BspCNI CTCAG 1 cut(s) 98
BspFNI CGCG 1 cut(s) 120
BspLI GGNNCC 4 cut(s) 170, 653, 1018, 1364
BspPI GGATC 3 cut(s) 863, 1222, 1249
BspT104I TTCGAA 2 cut(s) 276, 489
BspTNI GGTCTC 3 cut(s) 47, 211, 362
BsrBI CCGCTC 1 cut(s) 60
BsrGI TGTACA 1 cut(s) 538
BsrI ACTGG 9 cut(s) 178, 302, 602, 824, 872, 1162, 1189, 1216, 1243
BssMI GATC 7 cut(s) 303, 351, 673, 868, 955, 1214, 1241
BssT1I CCWWGG 3 cut(s) 901, 1306, 1408
Bst2UI CCWGG 8 cut(s) 163, 501, 702, 837, 861, 978, 1293, 1341
Bst4CI ACNGT 5 cut(s) 159, 268, 273, 656, 1267
Bst6I CTCTTC 3 cut(s) 106, 396, 468
BstAUI TGTACA 1 cut(s) 538
BstBI TTCGAA 2 cut(s) 276, 489
BstDEI CTNAG 4 cut(s) 8, 35, 85, 378
BstDSI CCRYGG 1 cut(s) 1386
BstEII GGTNACC 1 cut(s) 789
BstF5I GGATG 1 cut(s) 853
BstFNI CGCG 1 cut(s) 120
BstH2I RGCGCY 2 cut(s) 8, 1191
BstHHI GCGC 3 cut(s) 7, 122, 1190
BstKTI GATC 7 cut(s) 306, 354, 676, 871, 958, 1217, 1244
BstMAI GTCTC 6 cut(s) 47, 186, 211, 318, 362, 555
BstMBI GATC 7 cut(s) 303, 351, 673, 868, 955, 1214, 1241
BstMCI CGRYCG 1 cut(s) 221
BstMWI GCNNNNNNNGC 3 cut(s) 18, 77, 86
BstNI CCWGG 8 cut(s) 163, 501, 702, 837, 861, 978, 1293, 1341
BstNSI RCATGY 1 cut(s) 1028
BstPI GGTNACC 1 cut(s) 789
BstSCI CCNGG 8 cut(s) 161, 499, 700, 835, 859, 976, 1291, 1339
BstSFI CTRYAG 2 cut(s) 715, 1266
BstUI CGCG 1 cut(s) 120
BstV1I GCAGC 2 cut(s) 631, 922
BstX2I RGATCY 3 cut(s) 868, 1214, 1241
BstYI RGATCY 3 cut(s) 868, 1214, 1241
BstZI CGGCCG 1 cut(s) 218
BsuRI GGCC 6 cut(s) 220, 1017, 1096, 1123, 1305, 1329
BtgI CCRYGG 1 cut(s) 1386
BtgZI GCGATG 1 cut(s) 132
BtsCI GGATG 1 cut(s) 853
BtsIMutI CAGTG 8 cut(s) 295, 400, 831, 1155, 1182, 1209, 1236, 1263
CfoI GCGC 3 cut(s) 7, 122, 1190
Csp6I GTAC 5 cut(s) 229, 269, 539, 579, 875
CspCI CAANNNNNGTGG 2 cut(s) 886, 921
CviAII CATG 3 cut(s) 310, 1025, 1346
CviQI GTAC 5 cut(s) 229, 269, 539, 579, 875
DdeI CTNAG 4 cut(s) 8, 35, 85, 378
DpnI GATC 7 cut(s) 305, 353, 675, 870, 957, 1216, 1243
DpnII GATC 7 cut(s) 303, 351, 673, 868, 955, 1214, 1241
DrdI GACNNNNNNGTC 1 cut(s) 193
DseDI GACNNNNNNGTC 1 cut(s) 193
EaeI YGGCCR 3 cut(s) 218, 1303, 1327
EagI CGGCCG 1 cut(s) 218
Eam1104I CTCTTC 3 cut(s) 106, 396, 468
EarI CTCTTC 3 cut(s) 106, 396, 468
EciI GGCGGA 4 cut(s) 8, 14, 642, 687
Ecl136II GAGCTC 3 cut(s) 12, 1101, 1128
EclXI CGGCCG 1 cut(s) 218
Eco130I CCWWGG 3 cut(s) 901, 1306, 1408
Eco24I GRGCYC 3 cut(s) 14, 1103, 1130
Eco31I GGTCTC 3 cut(s) 47, 211, 362
Eco47I GGWCC 7 cut(s) 815, 1148, 1175, 1202, 1229, 1256, 1310
Eco52I CGGCCG 1 cut(s) 218
Eco53kI GAGCTC 3 cut(s) 12, 1101, 1128
Eco57I CTGAAG 2 cut(s) 363, 948
Eco88I CYCGRG 1 cut(s) 319
Eco91I GGTNACC 1 cut(s) 789
EcoICRI GAGCTC 3 cut(s) 12, 1101, 1128
EcoO109I RGGNCCY 1 cut(s) 815
EcoO65I GGTNACC 1 cut(s) 789
EcoRII CCWGG 8 cut(s) 161, 499, 700, 835, 859, 976, 1291, 1339
EcoT14I CCWWGG 3 cut(s) 901, 1306, 1408
EcoT38I GRGCYC 3 cut(s) 14, 1103, 1130
ErhI CCWWGG 3 cut(s) 901, 1306, 1408
FaeI CATG 3 cut(s) 313, 1028, 1349
FaqI GGGAC 1 cut(s) 1404
FatI CATG 3 cut(s) 309, 1024, 1345
FauI CCCGC 2 cut(s) 220, 267
FbaI TGATCA 2 cut(s) 351, 673
Fnu4HI GCNGC 3 cut(s) 152, 620, 911
FokI GGATG 1 cut(s) 860
FriOI GRGCYC 3 cut(s) 14, 1103, 1130
Fsp4HI GCNGC 3 cut(s) 152, 620, 911
FspBI CTAG 1 cut(s) 1035
GlaI GCGC 3 cut(s) 6, 121, 1189
GluI GCNGC 3 cut(s) 152, 620, 911
GsuI CTGGAG 7 cut(s) 161, 184, 522, 1098, 1125, 1152, 1179
HaeII RGCGCY 2 cut(s) 8, 1191
HaeIII GGCC 6 cut(s) 220, 1017, 1096, 1123, 1305, 1329
HapII CCGG 1 cut(s) 338
HhaI GCGC 3 cut(s) 7, 122, 1190
Hin1II CATG 3 cut(s) 313, 1028, 1349
Hin6I GCGC 3 cut(s) 5, 120, 1188
HinP1I GCGC 3 cut(s) 5, 120, 1188
HincII GTYRAC 1 cut(s) 722
HindII GTYRAC 1 cut(s) 722
HinfI GANTC 3 cut(s) 476, 524, 633
HpaII CCGG 1 cut(s) 338
HphI GGTGA 1 cut(s) 783
Hpy166II GTNNAC 3 cut(s) 497, 722, 1040
Hpy188I TCNGA 5 cut(s) 133, 186, 462, 469, 960
Hpy188III TCNNGA 5 cut(s) 319, 355, 926, 1104, 1131
Hpy8I GTNNAC 3 cut(s) 497, 722, 1040
Hpy99I CGWCG 4 cut(s) 202, 205, 226, 229
HpyAV CCTTC 4 cut(s) 272, 485, 609, 888
HpyCH4III ACNGT 5 cut(s) 159, 268, 273, 656, 1267
HpyCH4V TGCA 2 cut(s) 736, 1382
HpyF10VI GCNNNNNNNGC 3 cut(s) 18, 77, 86
HpyF3I CTNAG 4 cut(s) 8, 35, 85, 378
Hsp92II CATG 3 cut(s) 313, 1028, 1349
HspAI GCGC 3 cut(s) 5, 120, 1188
Ksp22I TGATCA 2 cut(s) 351, 673
Kzo9I GATC 7 cut(s) 303, 351, 673, 868, 955, 1214, 1241
LmnI GCTCC 6 cut(s) 174, 976, 1079, 1106, 1133, 1160
Lsp1109I GCAGC 2 cut(s) 631, 922
LweI GCATC 2 cut(s) 767, 838
MaeI CTAG 1 cut(s) 1035
MaeIII GTNAC 4 cut(s) 477, 656, 789, 1373
MalI GATC 7 cut(s) 305, 353, 675, 870, 957, 1216, 1243
MbiI CCGCTC 1 cut(s) 60
MboI GATC 7 cut(s) 303, 351, 673, 868, 955, 1214, 1241
MboII GAAGA 7 cut(s) 93, 356, 413, 427, 485, 642, 941
MflI RGATCY 3 cut(s) 868, 1214, 1241
MhlI GDGCHC 8 cut(s) 14, 1103, 1130, 1157, 1184, 1211, 1238, 1265
MlsI TGGCCA 2 cut(s) 1305, 1329
MluCI AATT 7 cut(s) 358, 766, 781, 892, 964, 1009, 1417
MluNI TGGCCA 2 cut(s) 1305, 1329
MlyI GAGTC 1 cut(s) 485
MmeI TCCRAC 1 cut(s) 1390
Mox20I TGGCCA 2 cut(s) 1305, 1329
MscI TGGCCA 2 cut(s) 1305, 1329
MseI TTAA 2 cut(s) 573, 1404
MslI CAYNNNNRTG 1 cut(s) 395
Msp20I TGGCCA 2 cut(s) 1305, 1329
MspA1I CMGCKG 1 cut(s) 1076
MspI CCGG 1 cut(s) 338
MspR9I CCNGG 8 cut(s) 163, 501, 702, 837, 861, 978, 1293, 1341
MvaI CCWGG 8 cut(s) 163, 501, 702, 837, 861, 978, 1293, 1341
MvnI CGCG 1 cut(s) 120
MwoI GCNNNNNNNGC 3 cut(s) 18, 77, 86
NdeII GATC 7 cut(s) 303, 351, 673, 868, 955, 1214, 1241
NlaIII CATG 3 cut(s) 313, 1028, 1349
NlaIV GGNNCC 4 cut(s) 170, 653, 1018, 1364
NmeAIII GCCGAG 2 cut(s) 1122, 1149
NmuCI GTSAC 3 cut(s) 477, 656, 789
NspI RCATGY 1 cut(s) 1028
NspV TTCGAA 2 cut(s) 276, 489
PasI CCCWGGG 2 cut(s) 1292, 1340
PcsI WCGNNNNNNNCGW 1 cut(s) 282
PfeI GAWTC 2 cut(s) 524, 633
Pfl23II CGTACG 1 cut(s) 228
PfoI TCCNGGA 1 cut(s) 161
PkrI GCNGC 3 cut(s) 153, 621, 912
PleI GAGTC 1 cut(s) 484
PpsI GAGTC 1 cut(s) 484
PpuMI RGGWCCY 1 cut(s) 815
PshBI ATTAAT 1 cut(s) 573
Psp124BI GAGCTC 3 cut(s) 14, 1103, 1130
Psp5II RGGWCCY 1 cut(s) 815
Psp6I CCWGG 8 cut(s) 161, 499, 700, 835, 859, 976, 1291, 1339
PspEI GGTNACC 1 cut(s) 789
PspGI CCWGG 8 cut(s) 161, 499, 700, 835, 859, 976, 1291, 1339
PspLI CGTACG 1 cut(s) 228
PspN4I GGNNCC 4 cut(s) 170, 653, 1018, 1364
PspPPI RGGWCCY 1 cut(s) 815
PsuI RGATCY 3 cut(s) 868, 1214, 1241
PvuII CAGCTG 1 cut(s) 1076
RsaI GTAC 5 cut(s) 230, 270, 540, 580, 876
RsaNI GTAC 5 cut(s) 229, 269, 539, 579, 875
RseI CAYNNNNRTG 1 cut(s) 395
SacI GAGCTC 3 cut(s) 14, 1103, 1130
SaqAI TTAA 2 cut(s) 573, 1404
SatI GCNGC 3 cut(s) 152, 620, 911
Sau3AI GATC 7 cut(s) 303, 351, 673, 868, 955, 1214, 1241
SchI GAGTC 1 cut(s) 485
ScrFI CCNGG 8 cut(s) 163, 501, 702, 837, 861, 978, 1293, 1341
SduI GDGCHC 8 cut(s) 14, 1103, 1130, 1157, 1184, 1211, 1238, 1265
SfaNI GCATC 2 cut(s) 767, 838
SfcI CTRYAG 2 cut(s) 715, 1266
SfuI TTCGAA 2 cut(s) 276, 489
SinI GGWCC 7 cut(s) 815, 1148, 1175, 1202, 1229, 1256, 1310
SmiMI CAYNNNNRTG 1 cut(s) 395
SpeI ACTAGT 1 cut(s) 1034
Sse9I AATT 7 cut(s) 358, 766, 781, 892, 964, 1009, 1417
SspMI CTAG 1 cut(s) 1035
SstI GAGCTC 3 cut(s) 14, 1103, 1130
StyD4I CCNGG 8 cut(s) 161, 499, 700, 835, 859, 976, 1291, 1339
StyI CCWWGG 3 cut(s) 901, 1306, 1408
TaaI ACNGT 5 cut(s) 159, 268, 273, 656, 1267
TaqI TCGA 2 cut(s) 276, 489
TaqII GACCGA 7 cut(s) 193, 1165, 1192, 1219, 1246, 1273, 1327
TasI AATT 7 cut(s) 358, 766, 781, 892, 964, 1009, 1417
TatI WGTACW 1 cut(s) 538
TauI GCSGC 1 cut(s) 154
TfiI GAWTC 2 cut(s) 524, 633
Tru1I TTAA 2 cut(s) 573, 1404
Tru9I TTAA 2 cut(s) 573, 1404
TscAI CASTG 8 cut(s) 302, 400, 831, 1162, 1189, 1216, 1243, 1270
TseFI GTSAC 3 cut(s) 477, 656, 789
TseI GCWGC 2 cut(s) 619, 910
Tsp45I GTSAC 3 cut(s) 477, 656, 789
TspDTI ATGAA 1 cut(s) 870
TspGWI ACGGA 2 cut(s) 246, 626
TspRI CASTG 8 cut(s) 302, 400, 831, 1162, 1189, 1216, 1243, 1270
VpaK11BI GGWCC 7 cut(s) 815, 1148, 1175, 1202, 1229, 1256, 1310
VspI ATTAAT 1 cut(s) 573
XceI RCATGY 1 cut(s) 1028
XcmI CCANNNNNNNNNTGG 1 cut(s) 1337
XspI CTAG 1 cut(s) 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.