Agamous-like MADS-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13790 AT5G13790 |
| fragaria_vesca | FvH4_7g01720 FvH4_7g01720 FvH4_7g01720 FvH4_7g01720 |
| malus_domestica | MD00G1004500.v1.1 MD01G1193800.v1.1 MD02G1301400.v1.1 MD07G1022500.v1.1 |
| prunus_persica | Prupe.2G023100_v2.0.a1 Prupe.2G023100_v2.0.a1 |
| pyrus_communis | pycom02g25320 pycom07g01690 |
| rosa_chinensis | RchiOBHm_Chr0c22g0500511 RchiOBHm_Chr1g0318281 RchiOBHm_Chr7g0204181 RchiOBHm_Chr7g0206821 RchiOBHm_Chr7g0207131 |
| rosa_laevigata | RLG00000030549 |
| rosa_multiflora | Rmu_ssc0000308.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00329440 Rroxscaffold_4G00329720 |
| rosa_rugosa | Rorug01G0019900 Rorug01G0019900 |
| rosa_samantha | Rh1AG032000 Rh1BG027500 Rh1CG030400 Rh1CG044100 Rh1DG039500 Rh3AG323900 Rh3BG361900 Rh4CG066600 |
| rosa_wichuraiana | Rw1G002550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 548 |
| Acc16I | TGCGCA | 1 cut(s) | 500 |
| AclI | AACGTT | 1 cut(s) | 494 |
| AcsI | RAATTY | 1 cut(s) | 296 |
| AcuI | CTGAAG | 1 cut(s) | 210 |
| AfaI | GTAC | 2 cut(s) | 462, 600 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 625 |
| AgsI | TTSAA | 2 cut(s) | 201, 361 |
| AhlI | ACTAGT | 1 cut(s) | 433 |
| AjiI | CACGTC | 1 cut(s) | 74 |
| AleI | CACNNNNGTG | 1 cut(s) | 606 |
| AluBI | AGCT | 6 cut(s) | 160, 277, 307, 357, 517, 728 |
| AluI | AGCT | 6 cut(s) | 160, 277, 307, 357, 517, 728 |
| Alw26I | GTCTC | 1 cut(s) | 64 |
| ApeKI | GCWGC | 3 cut(s) | 236, 370, 682 |
| ApoI | RAATTY | 1 cut(s) | 296 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 196 |
| AspLEI | GCGC | 1 cut(s) | 501 |
| AsuHPI | GGTGA | 1 cut(s) | 658 |
| BbvCI | CCTCAGC | 1 cut(s) | 123 |
| BbvI | GCAGC | 3 cut(s) | 248, 382, 669 |
| BccI | CCATC | 1 cut(s) | 562 |
| BcoDI | GTCTC | 1 cut(s) | 64 |
| BcuI | ACTAGT | 1 cut(s) | 433 |
| BfaI | CTAG | 3 cut(s) | 377, 434, 446 |
| BisI | GCNGC | 3 cut(s) | 237, 371, 683 |
| BlsI | GCNGC | 3 cut(s) | 238, 372, 684 |
| BmgBI | CACGTC | 1 cut(s) | 74 |
| BmiI | GGNNCC | 2 cut(s) | 714, 749 |
| BmsI | GCATC | 2 cut(s) | 109, 223 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 697, 729 |
| BpmI | CTGGAG | 1 cut(s) | 699 |
| Bpu10I | CCTNAGC | 1 cut(s) | 123 |
| BpuEI | CTTGAG | 2 cut(s) | 81, 503 |
| BsaBI | GATNNNNATC | 1 cut(s) | 20 |
| BsaJI | CCNNGG | 2 cut(s) | 270, 604 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 506, 536 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 625 |
| Bse1I | ACTGG | 3 cut(s) | 157, 174, 352 |
| Bse8I | GATNNNNATC | 1 cut(s) | 20 |
| BseDI | CCNNGG | 2 cut(s) | 270, 604 |
| BseGI | GGATG | 3 cut(s) | 238, 286, 298 |
| BseJI | GATNNNNATC | 1 cut(s) | 20 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 625 |
| BseMII | CTCAG | 2 cut(s) | 114, 756 |
| BseNI | ACTGG | 3 cut(s) | 157, 174, 352 |
| BseRI | GAGGAG | 1 cut(s) | 527 |
| BseXI | GCAGC | 3 cut(s) | 248, 382, 669 |
| BseYI | CCCAGC | 1 cut(s) | 77 |
| BsgI | GTGCAG | 1 cut(s) | 567 |
| BslFI | GGGAC | 1 cut(s) | 536 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 625 |
| BsmAI | GTCTC | 1 cut(s) | 64 |
| BsmBI | CGTCTC | 1 cut(s) | 64 |
| BsmFI | GGGAC | 1 cut(s) | 536 |
| BsmI | GAATGC | 2 cut(s) | 43, 251 |
| Bsp1407I | TGTACA | 1 cut(s) | 598 |
| Bsp143I | GATC | 1 cut(s) | 21 |
| Bsp19I | CCATGG | 1 cut(s) | 604 |
| BspCNI | CTCAG | 2 cut(s) | 115, 755 |
| BspLI | GGNNCC | 2 cut(s) | 714, 749 |
| BsrGI | TGTACA | 1 cut(s) | 598 |
| BsrI | ACTGG | 3 cut(s) | 157, 174, 352 |
| BssECI | CCNNGG | 2 cut(s) | 270, 604 |
| BssMI | GATC | 1 cut(s) | 21 |
| BssT1I | CCWWGG | 2 cut(s) | 270, 604 |
| Bst4CI | ACNGT | 1 cut(s) | 545 |
| BstAUI | TGTACA | 1 cut(s) | 598 |
| BstC8I | GCNNGC | 1 cut(s) | 474 |
| BstDEI | CTNAG | 3 cut(s) | 123, 217, 742 |
| BstDSI | CCRYGG | 1 cut(s) | 604 |
| BstF5I | GGATG | 3 cut(s) | 238, 286, 298 |
| BstHHI | GCGC | 1 cut(s) | 501 |
| BstKTI | GATC | 1 cut(s) | 24 |
| BstMAI | GTCTC | 1 cut(s) | 64 |
| BstMBI | GATC | 1 cut(s) | 21 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 128, 448, 679 |
| BstV1I | GCAGC | 3 cut(s) | 248, 382, 669 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 277 |
| BtgI | CCRYGG | 1 cut(s) | 604 |
| BtrI | CACGTC | 1 cut(s) | 74 |
| BtsCI | GGATG | 3 cut(s) | 238, 286, 298 |
| BtsIMutI | CAGTG | 2 cut(s) | 181, 414 |
| Cac8I | GCNNGC | 1 cut(s) | 474 |
| CfoI | GCGC | 1 cut(s) | 501 |
| Csp6I | GTAC | 2 cut(s) | 461, 599 |
| CviAII | CATG | 1 cut(s) | 605 |
| CviQI | GTAC | 2 cut(s) | 461, 599 |
| DdeI | CTNAG | 3 cut(s) | 123, 217, 742 |
| DpnI | GATC | 1 cut(s) | 23 |
| DpnII | GATC | 1 cut(s) | 21 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 548 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 548 |
| Eco130I | CCWWGG | 2 cut(s) | 270, 604 |
| Eco57I | CTGAAG | 1 cut(s) | 210 |
| EcoT14I | CCWWGG | 2 cut(s) | 270, 604 |
| ErhI | CCWWGG | 2 cut(s) | 270, 604 |
| Esp3I | CGTCTC | 1 cut(s) | 64 |
| FaeI | CATG | 1 cut(s) | 608 |
| FaiI | YATR | 5 cut(s) | 185, 207, 479, 606, 699 |
| FaqI | GGGAC | 1 cut(s) | 536 |
| FatI | CATG | 1 cut(s) | 604 |
| Fnu4HI | GCNGC | 3 cut(s) | 237, 371, 683 |
| FokI | GGATG | 3 cut(s) | 245, 293, 305 |
| Fsp4HI | GCNGC | 3 cut(s) | 237, 371, 683 |
| FspBI | CTAG | 3 cut(s) | 377, 434, 446 |
| FspI | TGCGCA | 1 cut(s) | 500 |
| GlaI | GCGC | 1 cut(s) | 500 |
| GluI | GCNGC | 3 cut(s) | 237, 371, 683 |
| GsaI | CCCAGC | 1 cut(s) | 81 |
| GsuI | CTGGAG | 1 cut(s) | 699 |
| HhaI | GCGC | 1 cut(s) | 501 |
| Hin1II | CATG | 1 cut(s) | 608 |
| Hin6I | GCGC | 1 cut(s) | 499 |
| HinP1I | GCGC | 1 cut(s) | 499 |
| HindIII | AAGCTT | 1 cut(s) | 158 |
| HinfI | GANTC | 4 cut(s) | 221, 266, 656, 740 |
| HphI | GGTGA | 1 cut(s) | 658 |
| Hpy166II | GTNNAC | 1 cut(s) | 601 |
| Hpy188I | TCNGA | 2 cut(s) | 229, 661 |
| Hpy188III | TCNNGA | 5 cut(s) | 25, 98, 456, 563, 716 |
| Hpy8I | GTNNAC | 1 cut(s) | 601 |
| HpyAV | CCTTC | 4 cut(s) | 389, 406, 415, 703 |
| HpyCH4III | ACNGT | 1 cut(s) | 545 |
| HpyCH4IV | ACGT | 2 cut(s) | 73, 494 |
| HpyCH4V | TGCA | 7 cut(s) | 236, 249, 302, 370, 548, 641, 673 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 128, 448, 679 |
| HpyF3I | CTNAG | 3 cut(s) | 123, 217, 742 |
| HpySE526I | ACGT | 2 cut(s) | 73, 494 |
| Hsp92II | CATG | 1 cut(s) | 608 |
| HspAI | GCGC | 1 cut(s) | 499 |
| Kzo9I | GATC | 1 cut(s) | 21 |
| LmnI | GCTCC | 6 cut(s) | 274, 424, 439, 514, 718, 747 |
| Lsp1109I | GCAGC | 3 cut(s) | 248, 382, 669 |
| LweI | GCATC | 2 cut(s) | 109, 223 |
| MaeI | CTAG | 3 cut(s) | 377, 434, 446 |
| MaeII | ACGT | 2 cut(s) | 73, 494 |
| MaeIII | GTNAC | 2 cut(s) | 55, 610 |
| MalI | GATC | 1 cut(s) | 23 |
| MboI | GATC | 1 cut(s) | 21 |
| MboII | GAAGA | 4 cut(s) | 25, 133, 216, 254 |
| MluCI | AATT | 7 cut(s) | 101, 296, 365, 386, 428, 634, 752 |
| MlyI | GAGTC | 2 cut(s) | 260, 734 |
| MnlI | CCTC | 6 cut(s) | 21, 118, 223, 411, 505, 699 |
| MroXI | GAANNNNTTC | 1 cut(s) | 196 |
| MseI | TTAA | 1 cut(s) | 389 |
| MslI | CAYNNNNRTG | 2 cut(s) | 606, 735 |
| Mva1269I | GAATGC | 2 cut(s) | 43, 251 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 128, 448, 679 |
| NcoI | CCATGG | 1 cut(s) | 604 |
| NdeII | GATC | 1 cut(s) | 21 |
| NlaIII | CATG | 1 cut(s) | 608 |
| NlaIV | GGNNCC | 2 cut(s) | 714, 749 |
| NmuCI | GTSAC | 2 cut(s) | 55, 610 |
| NsbI | TGCGCA | 1 cut(s) | 500 |
| OliI | CACNNNNGTG | 1 cut(s) | 606 |
| PctI | GAATGC | 2 cut(s) | 43, 251 |
| PdmI | GAANNNNTTC | 1 cut(s) | 196 |
| PfeI | GAWTC | 2 cut(s) | 221, 656 |
| PkrI | GCNGC | 3 cut(s) | 238, 372, 684 |
| PleI | GAGTC | 2 cut(s) | 260, 734 |
| PpsI | GAGTC | 2 cut(s) | 260, 734 |
| Psp1406I | AACGTT | 1 cut(s) | 494 |
| PspFI | CCCAGC | 1 cut(s) | 77 |
| PspN4I | GGNNCC | 2 cut(s) | 714, 749 |
| RsaI | GTAC | 2 cut(s) | 462, 600 |
| RsaNI | GTAC | 2 cut(s) | 461, 599 |
| RseI | CAYNNNNRTG | 2 cut(s) | 606, 735 |
| SaqAI | TTAA | 1 cut(s) | 389 |
| SatI | GCNGC | 3 cut(s) | 237, 371, 683 |
| Sau3AI | GATC | 1 cut(s) | 21 |
| SchI | GAGTC | 2 cut(s) | 260, 734 |
| SfaNI | GCATC | 2 cut(s) | 109, 223 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 606, 735 |
| SmlI | CTYRAG | 2 cut(s) | 96, 482 |
| SmoI | CTYRAG | 2 cut(s) | 96, 482 |
| SpeI | ACTAGT | 1 cut(s) | 433 |
| Sse9I | AATT | 7 cut(s) | 101, 296, 365, 386, 428, 634, 752 |
| SspI | AATATT | 1 cut(s) | 569 |
| SspMI | CTAG | 3 cut(s) | 377, 434, 446 |
| StyI | CCWWGG | 2 cut(s) | 270, 604 |
| TaaI | ACNGT | 1 cut(s) | 545 |
| TaiI | ACGT | 2 cut(s) | 76, 497 |
| TasI | AATT | 7 cut(s) | 101, 296, 365, 386, 428, 634, 752 |
| TatI | WGTACW | 2 cut(s) | 460, 598 |
| TfiI | GAWTC | 2 cut(s) | 221, 656 |
| Tru1I | TTAA | 1 cut(s) | 389 |
| Tru9I | TTAA | 1 cut(s) | 389 |
| TscAI | CASTG | 2 cut(s) | 181, 414 |
| TseFI | GTSAC | 2 cut(s) | 55, 610 |
| TseI | GCWGC | 3 cut(s) | 236, 370, 682 |
| Tsp45I | GTSAC | 2 cut(s) | 55, 610 |
| TspDTI | ATGAA | 4 cut(s) | 200, 309, 408, 504 |
| TspRI | CASTG | 2 cut(s) | 181, 414 |
| XapI | RAATTY | 1 cut(s) | 296 |
| XmnI | GAANNNNTTC | 1 cut(s) | 196 |
| XspI | CTAG | 3 cut(s) | 377, 434, 446 |