Prupe.2G117100_v2.0.a1

26S proteasome non-ATPase regulatory subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
17503626 .. 17509013
5388 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G117100.1

Sequence Viewer

Length: 1329 bp
ATGGAAGGAGGAGGCAATTTAGATGAGCAAATAGAGCAATTGCTGAATGTAGAGAAGAAGATGAGGACCGCTGGTGACGTGGCAGGAACCAAGAAAGCAGCCACTGACATTCTTGAGCTCTGCTTCAAAGCAGGTGCTTGGAAGACCCTCAATGACCAGATTGTTGTCTTATCAAAACGCCGTGGTCAGTTAAAGCAGGCTGTAACTGCAATGGTCCAGCAAGCAATGCAATATATTGATCAGACACCAGATCTTGAAACTCGTATAGAGCTTATTAAGACACTAAATAATATTTCTGCTGGGAAGATATATGTTGAAATTGAGAGGGCACGTCTAATAAAAAGACTTGCAAAGATTAAGGAAGAGCAAGGGCTTATTGCTGAAGCTGCTGATTTGATGCAAGAAATTGCGGTGGAAACATTTGGTGCTATGGCAAAAACTGAGAAGATAGCTTTCATTCTTGAACAAGTTCGTTTGTGCTTAGACCGCCAGGATTATGTTCGTGCTCAGATACTATCAAGGAAGATTAGTCCAAGAGTTTTTGATATTGATCCTGCAAAAGAAAAGAAAAAACCTAAAGAAGGTGACAATATTGTGGAAGAAGCTCCTGCTGATATTCCATCACTCTTGGAGTTGAAGCGGATCTACTATGAGTTAATGATACGGTATTATTTTCATAACAACGATTACCTTGAGATTTGCCGTTGCTATAAGGCGATATACGATATTCCTTCTGTCAGGGAGAATCCAGCCCAGTGGATACCGGTCTTGAGGAAGATCTGTTGGTACTTGGTTCTGGCGCCATATGATCCAATGCAATCAAGTCTTCTCAATTCCACCCTGGAGGATAAGAATCTTACTGAGATTCCATATTTTAAGTTGCTGTTGAAACAGGTGGTAACTATGGAGGTCATACAATGGACATCCCTTTGGAACACATACAAGGCTGAGTTTGAGAGTGAGAAGAGCATGCTTGGGGGCTCTTTGGGTGACAAAGCAGCGGAAGATCTAAGGCAGAGAATAATTGAACACAACATTCTTGTTGTTTCAAAGTACTACTCAAGGATAACCTTGAAGAGACTTGCAGAGCTTTTGTGTCTGAGTGTCCAGGAAGCTGAGAAGCATCTGTCAGATATGGTTGTGTCCAAGGCACTGGTGGCCAAGATTGACCGGCCAATAGGAATAGTCTGTTTTCAAACTGCAAAGGATAGCAACAATGTTCTTAATTCGTGGGCTACGAACTTGGAGAAATTGCTTGATCTTGTTGAGAAGAGCTGCCACCAAATACACAAAGAAACCATGGTTCACAAGGCTGCTCTGAAGGTTTGA

Protein Analysis

443

Amino Acids

50.59

Weight (kDa)

7.96

Isoelectric Point (pI)

41.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 122
Acc36I ACCTGC 1 cut(s) 122
AccB1I GGYRCC 1 cut(s) 799
AciI CCGC 5 cut(s) 69, 410, 487, 640, 1001
AclWI GGATC 3 cut(s) 545, 650, 803
AcoI YGGCCR 2 cut(s) 1158, 1172
AcuI CTGAAG 1 cut(s) 402
AcyI GRCGYC 1 cut(s) 800
AfaI GTAC 2 cut(s) 788, 1055
AfiI CCNNNNNNNGG 1 cut(s) 581
AgeI ACCGGT 1 cut(s) 763
AjiI CACGTC 2 cut(s) 79, 332
AjnI CCWGG 3 cut(s) 489, 840, 1107
AluBI AGCT 8 cut(s) 118, 271, 386, 452, 605, 1090, 1115, 1275
AluI AGCT 8 cut(s) 118, 271, 386, 452, 605, 1090, 1115, 1275
Alw21I GWGCWC 2 cut(s) 120, 508
Alw26I GTCTC 1 cut(s) 1072
AlwI GGATC 3 cut(s) 545, 650, 803
AlwNI CAGNNNCTG 1 cut(s) 104
AoxI GGCC 2 cut(s) 1158, 1172
ApeKI GCWGC 5 cut(s) 98, 386, 998, 1275, 1313
AsiGI ACCGGT 1 cut(s) 763
Asp700I GAANNNNTTC 1 cut(s) 468
AspLEI GCGC 1 cut(s) 802
AspS9I GGNCC 2 cut(s) 66, 214
AsuHPI GGTGA 3 cut(s) 86, 596, 1001
AvaII GGWCC 2 cut(s) 66, 214
BaeGI GKGCMC 1 cut(s) 331
BalI TGGCCA 1 cut(s) 1160
BanI GGYRCC 1 cut(s) 799
BanII GRGCYC 2 cut(s) 120, 983
BarI GAAGNNNNNNTAC 2 cut(s) 629, 661
BbsI GAAGAC 2 cut(s) 149, 818
Bbv12I GWGCWC 2 cut(s) 120, 508
BbvI GCAGC 5 cut(s) 110, 373, 1010, 1262, 1300
BccI CCATC 1 cut(s) 628
BceAI ACGGC 2 cut(s) 165, 687
BciT130I CCWGG 3 cut(s) 491, 842, 1109
BciVI GTATCC 1 cut(s) 753
BclI TGATCA 1 cut(s) 238
BcoDI GTCTC 1 cut(s) 1072
BfoI RGCGCY 1 cut(s) 803
BfuAI ACCTGC 1 cut(s) 122
BfuI GTATCC 1 cut(s) 753
BglII AGATCT 3 cut(s) 250, 777, 1006
BisI GCNGC 5 cut(s) 99, 387, 999, 1276, 1314
BlsI GCNGC 5 cut(s) 100, 388, 1000, 1277, 1315
BmcAI AGTACT 1 cut(s) 1055
Bme1390I CCNGG 3 cut(s) 491, 842, 1109
Bme18I GGWCC 2 cut(s) 66, 214
BmgBI CACGTC 2 cut(s) 79, 332
BmgT120I GGNCC 2 cut(s) 66, 214
BmiI GGNNCC 2 cut(s) 88, 801
BmrFI CCNGG 3 cut(s) 491, 842, 1109
BmrI ACTGGG 1 cut(s) 748
BmsI GCATC 2 cut(s) 387, 1132
BmuI ACTGGG 1 cut(s) 748
BpiI GAAGAC 2 cut(s) 149, 818
BpmI CTGGAG 1 cut(s) 863
BpuEI CTTGAG 4 cut(s) 134, 713, 790, 1045
BsaBI GATNNNNATC 2 cut(s) 549, 852
BsaHI GRCGYC 1 cut(s) 800
BsaJI CCNNGG 4 cut(s) 181, 840, 1146, 1299
BsaWI WCCGGW 1 cut(s) 763
Bsc4I CCNNNNNNNGG 1 cut(s) 581
Bse118I RCCGGY 2 cut(s) 763, 1170
Bse1I ACTGG 2 cut(s) 754, 1158
Bse3DI GCAATG 2 cut(s) 216, 231
Bse8I GATNNNNATC 2 cut(s) 549, 852
BseBI CCWGG 3 cut(s) 491, 842, 1109
BseDI CCNNGG 4 cut(s) 181, 840, 1146, 1299
BseGI GGATG 1 cut(s) 923
BseJI GATNNNNATC 2 cut(s) 549, 852
BseLI CCNNNNNNNGG 1 cut(s) 581
BseMI GCAATG 2 cut(s) 216, 231
BseMII CTCAG 6 cut(s) 432, 521, 852, 939, 1091, 1107
BseNI ACTGG 2 cut(s) 754, 1158
BseRI GAGGAG 1 cut(s) 24
BseSI GKGCMC 1 cut(s) 331
BseXI GCAGC 5 cut(s) 110, 373, 1010, 1262, 1300
BseYI CCCAGC 1 cut(s) 299
BshFI GGCC 2 cut(s) 1160, 1174
BshNI GGYRCC 1 cut(s) 799
BshTI ACCGGT 1 cut(s) 763
BsiHKAI GWGCWC 2 cut(s) 120, 508
BsiSI CCGG 2 cut(s) 764, 1171
BslI CCNNNNNNNGG 1 cut(s) 581
BsmAI GTCTC 1 cut(s) 1072
BsnI GGCC 2 cut(s) 1160, 1174
Bsp1286I GDGCHC 4 cut(s) 120, 331, 508, 983
Bsp143I GATC 8 cut(s) 238, 250, 550, 642, 777, 808, 1006, 1258
Bsp19I CCATGG 1 cut(s) 1299
BspACI CCGC 5 cut(s) 69, 410, 487, 640, 1001
BspANI GGCC 2 cut(s) 1160, 1174
BspCNI CTCAG 6 cut(s) 433, 520, 853, 940, 1092, 1108
BspLI GGNNCC 2 cut(s) 88, 801
BspMI ACCTGC 1 cut(s) 122
BspPI GGATC 3 cut(s) 545, 650, 803
BspQI GCTCTTC 3 cut(s) 357, 959, 1265
BspT107I GGYRCC 1 cut(s) 799
BsrDI GCAATG 2 cut(s) 216, 231
BsrFI RCCGGY 2 cut(s) 763, 1170
BsrI ACTGG 2 cut(s) 754, 1158
BssAI RCCGGY 2 cut(s) 763, 1170
BssECI CCNNGG 4 cut(s) 181, 840, 1146, 1299
BssMI GATC 8 cut(s) 238, 250, 550, 642, 777, 808, 1006, 1258
BssNI GRCGYC 1 cut(s) 800
BssT1I CCWWGG 2 cut(s) 1146, 1299
Bst2UI CCWGG 3 cut(s) 491, 842, 1109
Bst4CI ACNGT 1 cut(s) 666
Bst6I CTCTTC 4 cut(s) 357, 959, 1070, 1265
BstACI GRCGYC 1 cut(s) 800
BstAPI GCANNNNNTGC 1 cut(s) 226
BstC8I GCNNGC 3 cut(s) 198, 222, 971
BstDEI CTNAG 8 cut(s) 441, 481, 507, 861, 948, 1010, 1100, 1116
BstDSI CCRYGG 2 cut(s) 181, 1299
BstENI CCTNNNNNAGG 1 cut(s) 579
BstF5I GGATG 1 cut(s) 923
BstH2I RGCGCY 1 cut(s) 803
BstHHI GCGC 1 cut(s) 802
BstKTI GATC 8 cut(s) 241, 253, 553, 645, 780, 811, 1009, 1261
BstMAI GTCTC 1 cut(s) 1072
BstMBI GATC 8 cut(s) 238, 250, 550, 642, 777, 808, 1006, 1258
BstMWI GCNNNNNNNGC 6 cut(s) 34, 206, 226, 386, 486, 1157
BstNI CCWGG 3 cut(s) 491, 842, 1109
BstNSI RCATGY 1 cut(s) 973
BstSCI CCNGG 3 cut(s) 489, 840, 1107
BstSLI GKGCMC 1 cut(s) 331
BstV1I GCAGC 5 cut(s) 110, 373, 1010, 1262, 1300
BstV2I GAAGAC 2 cut(s) 149, 818
BstX2I RGATCY 4 cut(s) 250, 642, 777, 1006
BstXI CCANNNNNNTGG 2 cut(s) 756, 1153
BstYI RGATCY 4 cut(s) 250, 642, 777, 1006
BsuI GTATCC 1 cut(s) 753
BsuRI GGCC 2 cut(s) 1160, 1174
BtgI CCRYGG 2 cut(s) 181, 1299
BtrI CACGTC 2 cut(s) 79, 332
BtsCI GGATG 1 cut(s) 923
BtsIMutI CAGTG 3 cut(s) 102, 761, 1151
BveI ACCTGC 1 cut(s) 122
Cac8I GCNNGC 3 cut(s) 198, 222, 971
CaiI CAGNNNCTG 1 cut(s) 104
CfoI GCGC 1 cut(s) 802
Cfr10I RCCGGY 2 cut(s) 763, 1170
Cfr13I GGNCC 2 cut(s) 66, 214
Csp6I GTAC 2 cut(s) 787, 1054
CspAI ACCGGT 1 cut(s) 763
CviAII CATG 2 cut(s) 970, 1300
CviQI GTAC 2 cut(s) 787, 1054
DdeI CTNAG 8 cut(s) 441, 481, 507, 861, 948, 1010, 1100, 1116
DinI GGCGCC 1 cut(s) 801
DpnI GATC 8 cut(s) 240, 252, 552, 644, 779, 810, 1008, 1260
DpnII GATC 8 cut(s) 238, 250, 550, 642, 777, 808, 1006, 1258
EaeI YGGCCR 2 cut(s) 1158, 1172
Eam1104I CTCTTC 4 cut(s) 357, 959, 1070, 1265
EarI CTCTTC 4 cut(s) 357, 959, 1070, 1265
Ecl136II GAGCTC 1 cut(s) 118
Eco130I CCWWGG 2 cut(s) 1146, 1299
Eco24I GRGCYC 2 cut(s) 120, 983
Eco47I GGWCC 2 cut(s) 66, 214
Eco53kI GAGCTC 1 cut(s) 118
Eco57I CTGAAG 1 cut(s) 402
EcoICRI GAGCTC 1 cut(s) 118
EcoNI CCTNNNNNAGG 1 cut(s) 579
EcoRII CCWGG 3 cut(s) 489, 840, 1107
EcoT14I CCWWGG 2 cut(s) 1146, 1299
EcoT38I GRGCYC 2 cut(s) 120, 983
EgeI GGCGCC 1 cut(s) 801
EheI GGCGCC 1 cut(s) 801
ErhI CCWWGG 2 cut(s) 1146, 1299
FaeI CATG 2 cut(s) 973, 1303
FatI CATG 2 cut(s) 969, 1299
FauNDI CATATG 1 cut(s) 805
FbaI TGATCA 1 cut(s) 238
Fnu4HI GCNGC 5 cut(s) 99, 387, 999, 1276, 1314
FokI GGATG 1 cut(s) 910
FriOI GRGCYC 2 cut(s) 120, 983
Fsp4HI GCNGC 5 cut(s) 99, 387, 999, 1276, 1314
GlaI GCGC 1 cut(s) 801
GluI GCNGC 5 cut(s) 99, 387, 999, 1276, 1314
GsaI CCCAGC 1 cut(s) 303
GsuI CTGGAG 1 cut(s) 863
HaeII RGCGCY 1 cut(s) 803
HaeIII GGCC 2 cut(s) 1160, 1174
HapII CCGG 2 cut(s) 764, 1171
HhaI GCGC 1 cut(s) 802
Hin1I GRCGYC 1 cut(s) 800
Hin1II CATG 2 cut(s) 973, 1303
Hin6I GCGC 1 cut(s) 800
HinP1I GCGC 1 cut(s) 800
HinfI GANTC 3 cut(s) 745, 853, 865
HpaII CCGG 2 cut(s) 764, 1171
HphI GGTGA 3 cut(s) 86, 596, 1001
Hpy166II GTNNAC 1 cut(s) 1306
Hpy188I TCNGA 5 cut(s) 243, 510, 1101, 1132, 1320
Hpy188III TCNNGA 4 cut(s) 113, 254, 461, 769
Hpy8I GTNNAC 1 cut(s) 1306
HpyAV CCTTC 3 cut(s) 575, 741, 1315
HpyCH4III ACNGT 1 cut(s) 666
HpyCH4IV ACGT 2 cut(s) 78, 331
HpyCH4V TGCA 8 cut(s) 209, 229, 350, 400, 557, 817, 1085, 1202
HpyF10VI GCNNNNNNNGC 6 cut(s) 34, 206, 226, 386, 486, 1157
HpyF3I CTNAG 8 cut(s) 441, 481, 507, 861, 948, 1010, 1100, 1116
HpySE526I ACGT 2 cut(s) 78, 331
Hsp92I GRCGYC 1 cut(s) 800
Hsp92II CATG 2 cut(s) 973, 1303
HspAI GCGC 1 cut(s) 800
KasI GGCGCC 1 cut(s) 799
Ksp22I TGATCA 1 cut(s) 238
Kzo9I GATC 8 cut(s) 238, 250, 550, 642, 777, 808, 1006, 1258
LguI GCTCTTC 3 cut(s) 357, 959, 1265
LmnI GCTCC 1 cut(s) 610
Lsp1109I GCAGC 5 cut(s) 110, 373, 1010, 1262, 1300
LweI GCATC 2 cut(s) 387, 1132
MaeII ACGT 2 cut(s) 78, 331
MaeIII GTNAC 5 cut(s) 74, 202, 584, 898, 989
MalI GATC 8 cut(s) 240, 252, 552, 644, 779, 810, 1008, 1260
MboI GATC 8 cut(s) 238, 250, 550, 642, 777, 808, 1006, 1258
MfeI CAATTG 1 cut(s) 38
MflI RGATCY 4 cut(s) 250, 642, 777, 1006
MhlI GDGCHC 4 cut(s) 120, 331, 508, 983
MlsI TGGCCA 1 cut(s) 1160
MluCI AATT 8 cut(s) 16, 38, 318, 405, 832, 1023, 1225, 1250
MluNI TGGCCA 1 cut(s) 1160
Mly113I GGCGCC 1 cut(s) 800
MnlI CCTC 7 cut(s) 5, 57, 158, 318, 765, 838, 901
Mox20I TGGCCA 1 cut(s) 1160
MroXI GAANNNNTTC 1 cut(s) 468
MscI TGGCCA 1 cut(s) 1160
MseI TTAA 6 cut(s) 191, 276, 357, 656, 876, 1224
Msp20I TGGCCA 1 cut(s) 1160
MspA1I CMGCKG 2 cut(s) 71, 1001
MspI CCGG 2 cut(s) 764, 1171
MspR9I CCNGG 3 cut(s) 491, 842, 1109
MunI CAATTG 1 cut(s) 38
MvaI CCWGG 3 cut(s) 491, 842, 1109
MwoI GCNNNNNNNGC 6 cut(s) 34, 206, 226, 386, 486, 1157
NarI GGCGCC 1 cut(s) 800
NcoI CCATGG 1 cut(s) 1299
NdeI CATATG 1 cut(s) 805
NdeII GATC 8 cut(s) 238, 250, 550, 642, 777, 808, 1006, 1258
NlaIII CATG 2 cut(s) 973, 1303
NlaIV GGNNCC 2 cut(s) 88, 801
NmuCI GTSAC 3 cut(s) 74, 584, 989
NspI RCATGY 1 cut(s) 973
PaeI GCATGC 1 cut(s) 973
PaqCI CACCTGC 1 cut(s) 122
PciSI GCTCTTC 3 cut(s) 357, 959, 1265
PcsI WCGNNNNNNNCGW 1 cut(s) 1235
PdmI GAANNNNTTC 1 cut(s) 468
PfeI GAWTC 3 cut(s) 745, 853, 865
PfoI TCCNGGA 1 cut(s) 1107
PinAI ACCGGT 1 cut(s) 763
PkrI GCNGC 5 cut(s) 100, 388, 1000, 1277, 1315
PluTI GGCGCC 1 cut(s) 803
Psp124BI GAGCTC 1 cut(s) 120
Psp6I CCWGG 3 cut(s) 489, 840, 1107
PspFI CCCAGC 1 cut(s) 299
PspGI CCWGG 3 cut(s) 489, 840, 1107
PspN4I GGNNCC 2 cut(s) 88, 801
PspPI GGNCC 2 cut(s) 66, 214
PstNI CAGNNNCTG 1 cut(s) 104
PsuI RGATCY 4 cut(s) 250, 642, 777, 1006
RsaI GTAC 2 cut(s) 788, 1055
RsaNI GTAC 2 cut(s) 787, 1054
SacI GAGCTC 1 cut(s) 120
SapI GCTCTTC 3 cut(s) 357, 959, 1265
SaqAI TTAA 6 cut(s) 191, 276, 357, 656, 876, 1224
SatI GCNGC 5 cut(s) 99, 387, 999, 1276, 1314
Sau3AI GATC 8 cut(s) 238, 250, 550, 642, 777, 808, 1006, 1258
Sau96I GGNCC 2 cut(s) 66, 214
ScaI AGTACT 1 cut(s) 1055
ScrFI CCNGG 3 cut(s) 491, 842, 1109
SduI GDGCHC 4 cut(s) 120, 331, 508, 983
SfaNI GCATC 2 cut(s) 387, 1132
SfoI GGCGCC 1 cut(s) 801
SinI GGWCC 2 cut(s) 66, 214
SmlI CTYRAG 4 cut(s) 113, 692, 769, 1060
SmoI CTYRAG 4 cut(s) 113, 692, 769, 1060
SphI GCATGC 1 cut(s) 973
Sse9I AATT 8 cut(s) 16, 38, 318, 405, 832, 1023, 1225, 1250
SsiI CCGC 5 cut(s) 69, 410, 487, 640, 1001
SspDI GGCGCC 1 cut(s) 799
SspI AATATT 2 cut(s) 292, 592
SstI GAGCTC 1 cut(s) 120
StyD4I CCNGG 3 cut(s) 489, 840, 1107
StyI CCWWGG 2 cut(s) 1146, 1299
TaaI ACNGT 1 cut(s) 666
TaiI ACGT 2 cut(s) 81, 334
TasI AATT 8 cut(s) 16, 38, 318, 405, 832, 1023, 1225, 1250
TatI WGTACW 1 cut(s) 1053
TfiI GAWTC 3 cut(s) 745, 853, 865
Tru1I TTAA 6 cut(s) 191, 276, 357, 656, 876, 1224
Tru9I TTAA 6 cut(s) 191, 276, 357, 656, 876, 1224
TscAI CASTG 3 cut(s) 109, 761, 1158
TseFI GTSAC 3 cut(s) 74, 584, 989
TseI GCWGC 5 cut(s) 98, 386, 998, 1275, 1313
Tsp45I GTSAC 3 cut(s) 74, 584, 989
TspDTI ATGAA 2 cut(s) 445, 665
TspRI CASTG 3 cut(s) 109, 761, 1158
VpaK11BI GGWCC 2 cut(s) 66, 214
XagI CCTNNNNNAGG 1 cut(s) 579
XceI RCATGY 1 cut(s) 973
XcmI CCANNNNNNNNNTGG 1 cut(s) 1153
XmnI GAANNNNTTC 1 cut(s) 468
ZrmI AGTACT 1 cut(s) 1055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.