Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002585

Physical Location & Seq

Genomic Coordinates Forward (+)

17757268 .. 17760221

Gene Structure 2954 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G119800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1113 bp

ATGCGGGCTGTAACTGCAATGGTCCAGCAAGCAATGCAATTTATTGATCAGACACCAGATCTTGAAACTCGTATAGAGCTTATTAAGACACTAAACAATATTTCTGCTGGGAAGATATATGTTGAAATTGAGAGGGGACGTCTAATAAAAAGACTTGCAAAGATTAAGGAAGAGCAAGGGCTTATTGCTGAAGCTGCTGATTTGATGCAAGAAATTGCGGTGGAAACATTTGGTGCTATGGCAAAAACTGAGAAGATTGCTTTCATTCTTGAACAAGTTCGTTTGTGCTTAGACTGCCAGGATTATGTTCGTGCTCAGATACTATCAAGGAAGATTAGTCCAAGAGTTTTTGATATTGATCCTGCAAAAGAAAAGAAAAAATCTAAAGAAGGTGACAATATTGTGGAAGAAGCTCCTGCTGATATTCCATCACTCTTGGAGTTGAAGCGGATCTACTATGAGTTAATGATATGGTATTATTTTCATAACAACGATTACCTTGAGATTTGCCGTTGCTATAAGGCGATATACGATATTCCTTCTGTCAGGGAGAATCCAGCCCAGTGGATACCAATCTGCTGGTACTTGGTTCTGGCGCCGTATGATCCAATGCAGTCAAGTCTTCTCAATTCCACCCTGAAGGATAAGAATCTTACTGAGATTCCATATTTTAGGTATGTGGTAACTAATGAGGTCATAAAATGGACATCCCTTTGGAACACATACAAGGATGAGTTTGAGAGTGAGAAGAGCATGCTTGGGGGCTCTTTGGGTGACAAAGCAGCGGAAGATCTAAGGCAGAGAATAATTGAACACAACATTCTTGTTGTTTCAAAGTACTACTCAAGGATTACCTTGAAGAGAGTTGCAGAGCTTTTGTGTCTGAGTGTCCAGGAAGCTGAGAAACATCTGTCAGATATGGTTGTGTCCAAGGCACCGGTGGCCAAGATTGACCGGCCAATAGGAATAATCTGTTTTCAAACTCCAAAGGATAGCAACAATGTTCTTAATTCGTGGGCTACGAACTTGGAGAAATTGCTTGATCTTGTTGAGAAAAGCTGCCACCAAATACACAAAGAAACCATGGTTCACAAGGCTGCTCTCAAGGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005838 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008541 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019538 GO:0019941 GO:0022624 GO:0030163 GO:0031595 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048856 GO:0051603 GO:0070013 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

ko03050 ko05169 map03050 map05169

Pfam Domains

Protein Families

PCI

Protein Analysis

371

Amino Acids

42.71

Weight (kDa)

6.37

Isoelectric Point (pI)

41.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002585)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09900 AT5G09900 AT5G64760 AT5G64760 AT5G64760
fragaria_vesca	FvH4_1g23340 FvH4_1g23340 FvH4_1g23340 FvH4_1g23340 FvH4_1g23340 FvH4_5g27840
malus_domestica	MD02G1223100.v1.1 MD07G1091700.v1.1
prunus_persica	Prupe.2G117100_v2.0.a1 Prupe.2G119800_v2.0.a1
pyrus_communis	pycom07g07500
rosa_chinensis	RchiOBHm_Chr2g0118191 RchiOBHm_Chr7g0219741
rosa_laevigata	RLG00000002273 RLG00000018402
rosa_multiflora	Rmu_sc0001925.1_g000001 Rmu_sc0005014.1_g000001 Rmu_sc0007335.1_g000004
rosa_roxburghii	Rroxscaffold_2G00125830 Rroxscaffold_3G00239890
rosa_rugosa	Rorug02G0217200 Rorug07G0187400.1 Rorug07G0187500
rosa_samantha	Rh2AG273400 Rh2BG285600 Rh2DG281400 Rh2DG299400 Rh7AG331200 Rh7BG321000 Rh7CG348600 Rh7DG326700
rosa_wichuraiana	Rw2G021620 Rw2G021640 Rw2G021760 Rw7G027880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	142
AccB1I	GGYRCC	2 cut(s)	595, 934
AciI	CCGC	4 cut(s)	4, 218, 448, 785
AclWI	GGATC	3 cut(s)	353, 458, 599
AcoI	YGGCCR	2 cut(s)	942, 956
AcuI	CTGAAG	2 cut(s)	210, 659
AcyI	GRCGYC	2 cut(s)	139, 596
AfaI	GTAC	2 cut(s)	584, 839
AgeI	ACCGGT	1 cut(s)	937
AgsI	TTSAA	8 cut(s)	65, 125, 272, 445, 812, 834, 859, 980
AjnI	CCWGG	2 cut(s)	297, 891
AluBI	AGCT	6 cut(s)	79, 194, 413, 874, 899, 1059
AluI	AGCT	6 cut(s)	79, 194, 413, 874, 899, 1059
Alw21I	GWGCWC	1 cut(s)	316
AlwI	GGATC	3 cut(s)	353, 458, 599
AoxI	GGCC	2 cut(s)	942, 956
ApeKI	GCWGC	4 cut(s)	194, 782, 1059, 1097
AsiGI	ACCGGT	1 cut(s)	937
Asp700I	GAANNNNTTC	1 cut(s)	276
AspLEI	GCGC	1 cut(s)	598
AspS9I	GGNCC	1 cut(s)	22
AsuHPI	GGTGA	2 cut(s)	404, 785
AvaII	GGWCC	1 cut(s)	22
BalI	TGGCCA	1 cut(s)	944
BanI	GGYRCC	2 cut(s)	595, 934
BanII	GRGCYC	1 cut(s)	767
BarI	GAAGNNNNNNTAC	2 cut(s)	437, 469
BbsI	GAAGAC	1 cut(s)	614
Bbv12I	GWGCWC	1 cut(s)	316
BbvI	GCAGC	4 cut(s)	181, 794, 1046, 1084
BccI	CCATC	1 cut(s)	436
BceAI	ACGGC	2 cut(s)	495, 583
BciT130I	CCWGG	2 cut(s)	299, 893
BciVI	GTATCC	1 cut(s)	561
BclI	TGATCA	1 cut(s)	46
BfoI	RGCGCY	1 cut(s)	599
BfuI	GTATCC	1 cut(s)	561
BglII	AGATCT	2 cut(s)	58, 790
BisI	GCNGC	4 cut(s)	195, 783, 1060, 1098
BlsI	GCNGC	4 cut(s)	196, 784, 1061, 1099
BmcAI	AGTACT	1 cut(s)	839
Bme1390I	CCNGG	2 cut(s)	299, 893
Bme18I	GGWCC	1 cut(s)	22
BmgT120I	GGNCC	1 cut(s)	22
BmiI	GGNNCC	2 cut(s)	597, 936
BmrFI	CCNGG	2 cut(s)	299, 893
BmrI	ACTGGG	1 cut(s)	556
BmsI	GCATC	1 cut(s)	195
BmuI	ACTGGG	1 cut(s)	556
BpiI	GAAGAC	1 cut(s)	614
BpuEI	CTTGAG	3 cut(s)	521, 829, 1088
BsaBI	GATNNNNATC	3 cut(s)	357, 572, 648
BsaHI	GRCGYC	2 cut(s)	139, 596
BsaJI	CCNNGG	2 cut(s)	930, 1083
BsaWI	WCCGGW	1 cut(s)	937
Bse118I	RCCGGY	2 cut(s)	937, 954
Bse1I	ACTGG	1 cut(s)	562
Bse3DI	GCAATG	2 cut(s)	24, 39
Bse8I	GATNNNNATC	3 cut(s)	357, 572, 648
BseBI	CCWGG	2 cut(s)	299, 893
BseDI	CCNNGG	2 cut(s)	930, 1083
BseGI	GGATG	2 cut(s)	707, 736
BseJI	GATNNNNATC	3 cut(s)	357, 572, 648
BseMI	GCAATG	2 cut(s)	24, 39
BseMII	CTCAG	5 cut(s)	240, 329, 648, 875, 891
BseNI	ACTGG	1 cut(s)	562
BseXI	GCAGC	4 cut(s)	181, 794, 1046, 1084
BseYI	CCCAGC	1 cut(s)	107
BshFI	GGCC	2 cut(s)	944, 958
BshNI	GGYRCC	2 cut(s)	595, 934
BshTI	ACCGGT	1 cut(s)	937
BsiHKAI	GWGCWC	1 cut(s)	316
BsiSI	CCGG	2 cut(s)	938, 955
BslFI	GGGAC	1 cut(s)	150
BsmFI	GGGAC	1 cut(s)	150
BsnI	GGCC	2 cut(s)	944, 958
Bsp1286I	GDGCHC	2 cut(s)	316, 767
Bsp143I	GATC	7 cut(s)	46, 58, 358, 450, 604, 790, 1042
Bsp19I	CCATGG	1 cut(s)	1083
BspACI	CCGC	4 cut(s)	4, 218, 448, 785
BspANI	GGCC	2 cut(s)	944, 958
BspCNI	CTCAG	5 cut(s)	241, 328, 649, 876, 892
BspLI	GGNNCC	2 cut(s)	597, 936
BspPI	GGATC	3 cut(s)	353, 458, 599
BspQI	GCTCTTC	2 cut(s)	165, 743
BspT107I	GGYRCC	2 cut(s)	595, 934
BsrDI	GCAATG	2 cut(s)	24, 39
BsrFI	RCCGGY	2 cut(s)	937, 954
BsrI	ACTGG	1 cut(s)	562
BssAI	RCCGGY	2 cut(s)	937, 954
BssECI	CCNNGG	2 cut(s)	930, 1083
BssMI	GATC	7 cut(s)	46, 58, 358, 450, 604, 790, 1042
BssNI	GRCGYC	2 cut(s)	139, 596
BssT1I	CCWWGG	2 cut(s)	930, 1083
Bst2UI	CCWGG	2 cut(s)	299, 893
Bst6I	CTCTTC	3 cut(s)	165, 743, 854
BstACI	GRCGYC	2 cut(s)	139, 596
BstAPI	GCANNNNNTGC	1 cut(s)	34
BstC8I	GCNNGC	3 cut(s)	6, 30, 755
BstDEI	CTNAG	7 cut(s)	249, 289, 315, 657, 794, 884, 900
BstDSI	CCRYGG	1 cut(s)	1083
BstF5I	GGATG	2 cut(s)	707, 736
BstH2I	RGCGCY	1 cut(s)	599
BstHHI	GCGC	1 cut(s)	598
BstKTI	GATC	7 cut(s)	49, 61, 361, 453, 607, 793, 1045
BstMBI	GATC	7 cut(s)	46, 58, 358, 450, 604, 790, 1042
BstMWI	GCNNNNNNNGC	5 cut(s)	14, 34, 194, 294, 941
BstNI	CCWGG	2 cut(s)	299, 893
BstNSI	RCATGY	1 cut(s)	757
BstSCI	CCNGG	2 cut(s)	297, 891
BstV1I	GCAGC	4 cut(s)	181, 794, 1046, 1084
BstV2I	GAAGAC	1 cut(s)	614
BstX2I	RGATCY	3 cut(s)	58, 450, 790
BstXI	CCANNNNNNTGG	2 cut(s)	564, 579
BstYI	RGATCY	3 cut(s)	58, 450, 790
BsuI	GTATCC	1 cut(s)	561
BsuRI	GGCC	2 cut(s)	944, 958
BtgI	CCRYGG	1 cut(s)	1083
BtsCI	GGATG	2 cut(s)	707, 736
BtsIMutI	CAGTG	1 cut(s)	569
Cac8I	GCNNGC	3 cut(s)	6, 30, 755
CfoI	GCGC	1 cut(s)	598
Cfr10I	RCCGGY	2 cut(s)	937, 954
Cfr13I	GGNCC	1 cut(s)	22
Csp6I	GTAC	2 cut(s)	583, 838
CspAI	ACCGGT	1 cut(s)	937
CviAII	CATG	2 cut(s)	754, 1084
CviQI	GTAC	2 cut(s)	583, 838
DdeI	CTNAG	7 cut(s)	249, 289, 315, 657, 794, 884, 900
DinI	GGCGCC	1 cut(s)	597
DpnI	GATC	7 cut(s)	48, 60, 360, 452, 606, 792, 1044
DpnII	GATC	7 cut(s)	46, 58, 358, 450, 604, 790, 1042
EaeI	YGGCCR	2 cut(s)	942, 956
Eam1104I	CTCTTC	3 cut(s)	165, 743, 854
EarI	CTCTTC	3 cut(s)	165, 743, 854
Eco130I	CCWWGG	2 cut(s)	930, 1083
Eco24I	GRGCYC	1 cut(s)	767
Eco47I	GGWCC	1 cut(s)	22
Eco57I	CTGAAG	2 cut(s)	210, 659
EcoRII	CCWGG	2 cut(s)	297, 891
EcoT14I	CCWWGG	2 cut(s)	930, 1083
EcoT38I	GRGCYC	1 cut(s)	767
EgeI	GGCGCC	1 cut(s)	597
EheI	GGCGCC	1 cut(s)	597
ErhI	CCWWGG	2 cut(s)	930, 1083
FaeI	CATG	2 cut(s)	757, 1087
FaqI	GGGAC	1 cut(s)	150
FatI	CATG	2 cut(s)	753, 1083
FbaI	TGATCA	1 cut(s)	46
Fnu4HI	GCNGC	4 cut(s)	195, 783, 1060, 1098
FokI	GGATG	2 cut(s)	694, 743
FriOI	GRGCYC	1 cut(s)	767
Fsp4HI	GCNGC	4 cut(s)	195, 783, 1060, 1098
GlaI	GCGC	1 cut(s)	597
GluI	GCNGC	4 cut(s)	195, 783, 1060, 1098
GsaI	CCCAGC	1 cut(s)	111
HaeII	RGCGCY	1 cut(s)	599
HaeIII	GGCC	2 cut(s)	944, 958
HapII	CCGG	2 cut(s)	938, 955
HhaI	GCGC	1 cut(s)	598
Hin1I	GRCGYC	2 cut(s)	139, 596
Hin1II	CATG	2 cut(s)	757, 1087
Hin6I	GCGC	1 cut(s)	596
HinP1I	GCGC	1 cut(s)	596
HinfI	GANTC	3 cut(s)	553, 649, 661
HpaII	CCGG	2 cut(s)	938, 955
HphI	GGTGA	2 cut(s)	404, 785
Hpy166II	GTNNAC	1 cut(s)	1090
Hpy188I	TCNGA	4 cut(s)	51, 318, 885, 916
Hpy188III	TCNNGA	2 cut(s)	62, 269
Hpy8I	GTNNAC	1 cut(s)	1090
HpyAV	CCTTC	3 cut(s)	383, 549, 634
HpyCH4IV	ACGT	1 cut(s)	139
HpyCH4V	TGCA	7 cut(s)	17, 37, 158, 208, 365, 613, 869
HpyF10VI	GCNNNNNNNGC	5 cut(s)	14, 34, 194, 294, 941
HpyF3I	CTNAG	7 cut(s)	249, 289, 315, 657, 794, 884, 900
HpySE526I	ACGT	1 cut(s)	139
Hsp92I	GRCGYC	2 cut(s)	139, 596
Hsp92II	CATG	2 cut(s)	757, 1087
HspAI	GCGC	1 cut(s)	596
KasI	GGCGCC	1 cut(s)	595
Ksp22I	TGATCA	1 cut(s)	46
Kzo9I	GATC	7 cut(s)	46, 58, 358, 450, 604, 790, 1042
LguI	GCTCTTC	2 cut(s)	165, 743
LmnI	GCTCC	1 cut(s)	418
Lsp1109I	GCAGC	4 cut(s)	181, 794, 1046, 1084
LweI	GCATC	1 cut(s)	195
MaeII	ACGT	1 cut(s)	139
MaeIII	GTNAC	4 cut(s)	10, 392, 682, 773
MalI	GATC	7 cut(s)	48, 60, 360, 452, 606, 792, 1044
MboI	GATC	7 cut(s)	46, 58, 358, 450, 604, 790, 1042
MboII	GAAGA	9 cut(s)	124, 182, 265, 343, 419, 614, 760, 800, 871
MflI	RGATCY	3 cut(s)	58, 450, 790
MhlI	GDGCHC	2 cut(s)	316, 767
MlsI	TGGCCA	1 cut(s)	944
MluCI	AATT	7 cut(s)	38, 126, 213, 628, 807, 1009, 1034
MluNI	TGGCCA	1 cut(s)	944
Mly113I	GGCGCC	1 cut(s)	596
MnlI	CCTC	2 cut(s)	126, 685
Mox20I	TGGCCA	1 cut(s)	944
MroXI	GAANNNNTTC	1 cut(s)	276
MscI	TGGCCA	1 cut(s)	944
MseI	TTAA	4 cut(s)	84, 165, 464, 1008
Msp20I	TGGCCA	1 cut(s)	944
MspA1I	CMGCKG	1 cut(s)	785
MspI	CCGG	2 cut(s)	938, 955
MspR9I	CCNGG	2 cut(s)	299, 893
MvaI	CCWGG	2 cut(s)	299, 893
MwoI	GCNNNNNNNGC	5 cut(s)	14, 34, 194, 294, 941
NarI	GGCGCC	1 cut(s)	596
NcoI	CCATGG	1 cut(s)	1083
NdeII	GATC	7 cut(s)	46, 58, 358, 450, 604, 790, 1042
NlaIII	CATG	2 cut(s)	757, 1087
NlaIV	GGNNCC	2 cut(s)	597, 936
NmuCI	GTSAC	2 cut(s)	392, 773
NspI	RCATGY	1 cut(s)	757
PaeI	GCATGC	1 cut(s)	757
PciSI	GCTCTTC	2 cut(s)	165, 743
PcsI	WCGNNNNNNNCGW	1 cut(s)	1019
PdmI	GAANNNNTTC	1 cut(s)	276
PfeI	GAWTC	3 cut(s)	553, 649, 661
PfoI	TCCNGGA	1 cut(s)	891
PinAI	ACCGGT	1 cut(s)	937
PkrI	GCNGC	4 cut(s)	196, 784, 1061, 1099
PluTI	GGCGCC	1 cut(s)	599
Psp6I	CCWGG	2 cut(s)	297, 891
PspFI	CCCAGC	1 cut(s)	107
PspGI	CCWGG	2 cut(s)	297, 891
PspN4I	GGNNCC	2 cut(s)	597, 936
PspPI	GGNCC	1 cut(s)	22
PsuI	RGATCY	3 cut(s)	58, 450, 790
RsaI	GTAC	2 cut(s)	584, 839
RsaNI	GTAC	2 cut(s)	583, 838
SapI	GCTCTTC	2 cut(s)	165, 743
SaqAI	TTAA	4 cut(s)	84, 165, 464, 1008
SatI	GCNGC	4 cut(s)	195, 783, 1060, 1098
Sau3AI	GATC	7 cut(s)	46, 58, 358, 450, 604, 790, 1042
Sau96I	GGNCC	1 cut(s)	22
ScaI	AGTACT	1 cut(s)	839
ScrFI	CCNGG	2 cut(s)	299, 893
SduI	GDGCHC	2 cut(s)	316, 767
SfaNI	GCATC	1 cut(s)	195
SfoI	GGCGCC	1 cut(s)	597
SgrAI	CRCCGGYG	1 cut(s)	937
SinI	GGWCC	1 cut(s)	22
SmlI	CTYRAG	3 cut(s)	500, 844, 1103
SmoI	CTYRAG	3 cut(s)	500, 844, 1103
SphI	GCATGC	1 cut(s)	757
Sse9I	AATT	7 cut(s)	38, 126, 213, 628, 807, 1009, 1034
SsiI	CCGC	4 cut(s)	4, 218, 448, 785
SspDI	GGCGCC	1 cut(s)	595
SspI	AATATT	2 cut(s)	100, 400
StyD4I	CCNGG	2 cut(s)	297, 891
StyI	CCWWGG	2 cut(s)	930, 1083
TaiI	ACGT	1 cut(s)	142
TasI	AATT	7 cut(s)	38, 126, 213, 628, 807, 1009, 1034
TatI	WGTACW	1 cut(s)	837
TfiI	GAWTC	3 cut(s)	553, 649, 661
Tru1I	TTAA	4 cut(s)	84, 165, 464, 1008
Tru9I	TTAA	4 cut(s)	84, 165, 464, 1008
TscAI	CASTG	1 cut(s)	569
TseFI	GTSAC	2 cut(s)	392, 773
TseI	GCWGC	4 cut(s)	194, 782, 1059, 1097
Tsp45I	GTSAC	2 cut(s)	392, 773
TspDTI	ATGAA	2 cut(s)	253, 473
TspRI	CASTG	1 cut(s)	569
VpaK11BI	GGWCC	1 cut(s)	22
XceI	RCATGY	1 cut(s)	757
XcmI	CCANNNNNNNNNTGG	1 cut(s)	937
XmnI	GAANNNNTTC	1 cut(s)	276
ZraI	GACGTC	1 cut(s)	140
ZrmI	AGTACT	1 cut(s)	839

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.