Prupe.2G124000_v2.0.a1
ERF Family

Histidine phosphatase superfamily (branch 1)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0006635
Physical Location & Seq
Forward (+)
18035652 .. 18037751
2100 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G124000.1

Sequence Viewer

Length: 834 bp
ATGGACGCGCCCGACTCCTGCCAAACCGCGGCGCAACGCTTCCAAAACGTCGTCGTCATGCGCCACGGCGACCGCATCGACAACTTCGAGCCTCTGTGGGTGTCGCAGGCAGCGAGACCATGGGACCCGCCTCTGGTCCAAGCGGGCAAGGATCGGGCCTTCTGCACGGGTACGAAGCTCCGATCCGATCTCGGATTCCAAATCAATCGGGTCTTCGTCTCACCGTTTATACGCTGCGTCGAGACCGCCGTCCAAGTCGTCACCGCTCTCTCCGCCAGCGAACACCCTACTCTCTCCAAATACGAAAGCGACCAGCCCCTCCCTGTCGATCCATCTAAGCTCAAGGTCTCAATTGAATATGGGTTATGTGAGATGCTGAACAAGGAGGCCATCCGTGGCGACTTGGCTCCAAAAGATGGACAACGATGGGGTTTCAATATACCAGAGCTTGAGGCTTTGTTCCCAGCTGGGACAGTGGATCAAACTGTGGAACGAGTGTACAAAGAGTTGCCCCAGTGGGGAGAGAGTGTGACGGGTGCACGGGCTAGATACGCTGAGGTCATTCTGGCCCTTGCAGATAAATACCCTACAGAAAATCTGCTCCTTGTCACTCATGGTGAAGGAGTTGGTTCATCAATTTCTTTATTCCTGGAGGGCGCCACAGTTTATGAAGTAAATTACTGTGCATATTCAGAACTAAGAAGGCCTGTCTTTGACAAAGACCAGCCAACAACTGCTGGGAAGTTTGAGGTAGTGAAAAATCTTCGCCAGACTGGTCTCAGTTACTCGCTTGAAATTGCGGAGACAGGTGATTTAAGCTTACCATCAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
His_Phos_1

Protein Analysis

278

Amino Acids

30.7

Weight (kDa)

4.96

Isoelectric Point (pI)

36.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 656
AccB7I CCANNNNNTGG 1 cut(s) 416
AccBSI CCGCTC 1 cut(s) 266
AccII CGCG 2 cut(s) 8, 29
AciI CCGC 9 cut(s) 27, 29, 73, 128, 143, 246, 264, 273, 800
AclWI GGATC 4 cut(s) 159, 177, 323, 486
AcyI GRCGYC 1 cut(s) 657
AfaI GTAC 2 cut(s) 172, 500
AfiI CCNNNNNNNGG 4 cut(s) 28, 133, 416, 518
AgsI TTSAA 3 cut(s) 356, 436, 794
AjnI CCWGG 1 cut(s) 648
AluBI AGCT 5 cut(s) 178, 340, 448, 467, 819
AluI AGCT 5 cut(s) 178, 340, 448, 467, 819
Alw21I GWGCWC 1 cut(s) 541
Alw26I GTCTC 6 cut(s) 109, 223, 236, 352, 782, 797
Alw44I GTGCAC 1 cut(s) 537
AlwI GGATC 4 cut(s) 159, 177, 323, 486
AoxI GGCC 4 cut(s) 156, 387, 567, 704
ApaLI GTGCAC 1 cut(s) 537
ApeKI GCWGC 2 cut(s) 110, 234
AspLEI GCGC 4 cut(s) 10, 34, 63, 659
AspS9I GGNCC 4 cut(s) 124, 136, 156, 568
AsuHPI GGTGA 4 cut(s) 213, 253, 629, 821
AvaII GGWCC 2 cut(s) 124, 136
BaeGI GKGCMC 1 cut(s) 541
BanI GGYRCC 1 cut(s) 656
BbsI GAAGAC 1 cut(s) 205
Bbv12I GWGCWC 1 cut(s) 541
BbvCI CCTCAGC 1 cut(s) 555
BbvI GCAGC 2 cut(s) 122, 221
BccI CCATC 5 cut(s) 340, 398, 410, 420, 832
BceAI ACGGC 2 cut(s) 82, 233
BciT130I CCWGG 1 cut(s) 650
BcoDI GTCTC 6 cut(s) 109, 223, 236, 352, 782, 797
BfaI CTAG 1 cut(s) 546
BfmI CTRYAG 1 cut(s) 588
BfoI RGCGCY 1 cut(s) 660
BisI GCNGC 3 cut(s) 30, 111, 235
BlsI GCNGC 3 cut(s) 31, 112, 236
Bme1390I CCNGG 1 cut(s) 650
Bme18I GGWCC 2 cut(s) 124, 136
BmgT120I GGNCC 4 cut(s) 124, 136, 156, 568
BmiI GGNNCC 4 cut(s) 125, 126, 408, 658
BmrFI CCNGG 1 cut(s) 650
BmrI ACTGGG 1 cut(s) 508
BmsI GCATC 2 cut(s) 84, 363
BmuI ACTGGG 1 cut(s) 508
BoxI GACNNNNGTC 1 cut(s) 248
BpiI GAAGAC 1 cut(s) 205
BpmI CTGGAG 1 cut(s) 671
Bpu10I CCTNAGC 1 cut(s) 555
BpuEI CTTGAG 2 cut(s) 326, 470
BsaHI GRCGYC 1 cut(s) 657
BsaI GGTCTC 4 cut(s) 109, 236, 352, 782
BsaJI CCNNGG 4 cut(s) 27, 64, 119, 394
BsaXI ACNNNNNCTCC 2 cut(s) 513, 543
Bsc4I CCNNNNNNNGG 4 cut(s) 28, 133, 416, 518
Bse1I ACTGG 2 cut(s) 514, 778
BseBI CCWGG 1 cut(s) 650
BseDI CCNNGG 4 cut(s) 27, 64, 119, 394
BseGI GGATG 1 cut(s) 390
BseLI CCNNNNNNNGG 4 cut(s) 28, 133, 416, 518
BseMII CTCAG 2 cut(s) 546, 793
BseNI ACTGG 2 cut(s) 514, 778
BseSI GKGCMC 1 cut(s) 541
BseXI GCAGC 2 cut(s) 122, 221
BseYI CCCAGC 3 cut(s) 463, 467, 737
BsgI GTGCAG 1 cut(s) 148
Bsh1236I CGCG 2 cut(s) 8, 29
Bsh1285I CGRYCG 1 cut(s) 73
BshFI GGCC 4 cut(s) 158, 389, 569, 706
BshNI GGYRCC 1 cut(s) 656
BsiEI CGRYCG 1 cut(s) 73
BsiHKAI GWGCWC 1 cut(s) 541
BslFI GGGAC 2 cut(s) 137, 484
BslI CCNNNNNNNGG 4 cut(s) 28, 133, 416, 518
BsmAI GTCTC 6 cut(s) 109, 223, 236, 352, 782, 797
BsmBI CGTCTC 1 cut(s) 223
BsmFI GGGAC 2 cut(s) 137, 484
BsnI GGCC 4 cut(s) 158, 389, 569, 706
Bso31I GGTCTC 4 cut(s) 109, 236, 352, 782
Bsp1286I GDGCHC 1 cut(s) 541
Bsp1407I TGTACA 1 cut(s) 498
Bsp143I GATC 5 cut(s) 151, 182, 187, 328, 478
Bsp19I CCATGG 1 cut(s) 119
BspACI CCGC 9 cut(s) 27, 29, 73, 128, 143, 246, 264, 273, 800
BspANI GGCC 4 cut(s) 158, 389, 569, 706
BspCNI CTCAG 2 cut(s) 547, 792
BspFNI CGCG 2 cut(s) 8, 29
BspLI GGNNCC 4 cut(s) 125, 126, 408, 658
BspPI GGATC 4 cut(s) 159, 177, 323, 486
BspT107I GGYRCC 1 cut(s) 656
BspTNI GGTCTC 4 cut(s) 109, 236, 352, 782
BsrBI CCGCTC 1 cut(s) 266
BsrGI TGTACA 1 cut(s) 498
BsrI ACTGG 2 cut(s) 514, 778
BssECI CCNNGG 4 cut(s) 27, 64, 119, 394
BssMI GATC 5 cut(s) 151, 182, 187, 328, 478
BssNI GRCGYC 1 cut(s) 657
BssT1I CCWWGG 1 cut(s) 119
Bst2UI CCWGG 1 cut(s) 650
Bst4CI ACNGT 5 cut(s) 225, 475, 487, 664, 683
BstACI GRCGYC 1 cut(s) 657
BstAUI TGTACA 1 cut(s) 498
BstC8I GCNNGC 3 cut(s) 108, 145, 277
BstDEI CTNAG 4 cut(s) 336, 555, 698, 779
BstDSI CCRYGG 4 cut(s) 27, 64, 119, 394
BstF5I GGATG 1 cut(s) 390
BstFNI CGCG 2 cut(s) 8, 29
BstH2I RGCGCY 1 cut(s) 660
BstHHI GCGC 4 cut(s) 10, 34, 63, 659
BstKTI GATC 5 cut(s) 154, 185, 190, 331, 481
BstMAI GTCTC 6 cut(s) 109, 223, 236, 352, 782, 797
BstMBI GATC 5 cut(s) 151, 182, 187, 328, 478
BstMCI CGRYCG 1 cut(s) 73
BstMWI GCNNNNNNNGC 2 cut(s) 272, 551
BstNI CCWGG 1 cut(s) 650
BstPAI GACNNNNGTC 1 cut(s) 248
BstSCI CCNGG 1 cut(s) 648
BstSFI CTRYAG 1 cut(s) 588
BstSLI GKGCMC 1 cut(s) 541
BstUI CGCG 2 cut(s) 8, 29
BstV1I GCAGC 2 cut(s) 122, 221
BstV2I GAAGAC 1 cut(s) 205
BsuRI GGCC 4 cut(s) 158, 389, 569, 706
BtgI CCRYGG 4 cut(s) 27, 64, 119, 394
BtsCI GGATG 1 cut(s) 390
BtsIMutI CAGTG 2 cut(s) 480, 521
Cac8I GCNNGC 3 cut(s) 108, 145, 277
CfoI GCGC 4 cut(s) 10, 34, 63, 659
Cfr13I GGNCC 4 cut(s) 124, 136, 156, 568
Cfr42I CCGCGG 1 cut(s) 30
CseI GACGC 2 cut(s) 14, 226
Csp6I GTAC 2 cut(s) 171, 499
CviAII CATG 3 cut(s) 58, 120, 614
CviQI GTAC 2 cut(s) 171, 499
DdeI CTNAG 4 cut(s) 336, 555, 698, 779
DinI GGCGCC 1 cut(s) 658
DpnI GATC 5 cut(s) 153, 184, 189, 330, 480
DpnII GATC 5 cut(s) 151, 182, 187, 328, 478
EciI GGCGGA 1 cut(s) 262
Eco130I CCWWGG 1 cut(s) 119
Eco147I AGGCCT 1 cut(s) 706
Eco31I GGTCTC 4 cut(s) 109, 236, 352, 782
Eco47I GGWCC 2 cut(s) 124, 136
EcoO109I RGGNCCY 1 cut(s) 124
EcoRII CCWGG 1 cut(s) 648
EcoT14I CCWWGG 1 cut(s) 119
EgeI GGCGCC 1 cut(s) 658
EheI GGCGCC 1 cut(s) 658
ErhI CCWWGG 1 cut(s) 119
Esp3I CGTCTC 1 cut(s) 223
FaeI CATG 3 cut(s) 61, 123, 617
FaiI YATR 9 cut(s) 59, 121, 230, 360, 367, 440, 615, 669, 688
FaqI GGGAC 2 cut(s) 137, 484
FatI CATG 3 cut(s) 57, 119, 613
FauI CCCGC 2 cut(s) 135, 136
Fnu4HI GCNGC 3 cut(s) 30, 111, 235
FokI GGATG 1 cut(s) 377
Fsp4HI GCNGC 3 cut(s) 30, 111, 235
FspBI CTAG 1 cut(s) 546
GlaI GCGC 4 cut(s) 9, 33, 62, 658
GluI GCNGC 3 cut(s) 30, 111, 235
GsaI CCCAGC 3 cut(s) 467, 471, 741
GsuI CTGGAG 1 cut(s) 671
HaeII RGCGCY 1 cut(s) 660
HaeIII GGCC 4 cut(s) 158, 389, 569, 706
HgaI GACGC 2 cut(s) 14, 226
HhaI GCGC 4 cut(s) 10, 34, 63, 659
Hin1I GRCGYC 1 cut(s) 657
Hin1II CATG 3 cut(s) 61, 123, 617
Hin6I GCGC 4 cut(s) 8, 32, 61, 657
HinP1I GCGC 4 cut(s) 8, 32, 61, 657
HindIII AAGCTT 1 cut(s) 817
HinfI GANTC 2 cut(s) 14, 195
HphI GGTGA 4 cut(s) 213, 253, 629, 821
Hpy166II GTNNAC 2 cut(s) 499, 539
Hpy188I TCNGA 5 cut(s) 182, 187, 194, 694, 829
Hpy188III TCNNGA 1 cut(s) 241
Hpy8I GTNNAC 2 cut(s) 499, 539
Hpy99I CGWCG 3 cut(s) 53, 56, 242
HpyAV CCTTC 3 cut(s) 169, 614, 696
HpyCH4III ACNGT 5 cut(s) 225, 475, 487, 664, 683
HpyCH4IV ACGT 1 cut(s) 48
HpyCH4V TGCA 4 cut(s) 165, 539, 575, 686
HpyF10VI GCNNNNNNNGC 2 cut(s) 272, 551
HpyF3I CTNAG 4 cut(s) 336, 555, 698, 779
HpySE526I ACGT 1 cut(s) 48
Hsp92I GRCGYC 1 cut(s) 657
Hsp92II CATG 3 cut(s) 61, 123, 617
HspAI GCGC 4 cut(s) 8, 32, 61, 657
KasI GGCGCC 1 cut(s) 656
KflI GGGWCCC 1 cut(s) 124
KspI CCGCGG 1 cut(s) 30
Kzo9I GATC 5 cut(s) 151, 182, 187, 328, 478
LmnI GCTCC 3 cut(s) 183, 412, 606
Lsp1109I GCAGC 2 cut(s) 122, 221
LweI GCATC 2 cut(s) 84, 363
MaeI CTAG 1 cut(s) 546
MaeII ACGT 1 cut(s) 48
MaeIII GTNAC 4 cut(s) 259, 529, 607, 782
MalI GATC 5 cut(s) 153, 184, 189, 330, 480
MbiI CCGCTC 1 cut(s) 266
MboI GATC 5 cut(s) 151, 182, 187, 328, 478
MboII GAAGA 2 cut(s) 205, 755
MfeI CAATTG 1 cut(s) 351
MhlI GDGCHC 1 cut(s) 541
MluCI AATT 4 cut(s) 351, 636, 676, 795
Mly113I GGCGCC 1 cut(s) 657
MlyI GAGTC 1 cut(s) 8
MnlI CCTC 8 cut(s) 102, 141, 329, 379, 445, 550, 646, 742
MseI TTAA 1 cut(s) 815
MspA1I CMGCKG 2 cut(s) 29, 467
MspR9I CCNGG 1 cut(s) 650
MunI CAATTG 1 cut(s) 351
MvaI CCWGG 1 cut(s) 650
MvnI CGCG 2 cut(s) 8, 29
MwoI GCNNNNNNNGC 2 cut(s) 272, 551
NarI GGCGCC 1 cut(s) 657
NcoI CCATGG 1 cut(s) 119
NdeII GATC 5 cut(s) 151, 182, 187, 328, 478
NlaIII CATG 3 cut(s) 61, 123, 617
NlaIV GGNNCC 4 cut(s) 125, 126, 408, 658
NmuCI GTSAC 3 cut(s) 259, 529, 607
PceI AGGCCT 1 cut(s) 706
PcsI WCGNNNNNNNCGW 3 cut(s) 84, 110, 246
PfeI GAWTC 1 cut(s) 195
PflMI CCANNNNNTGG 1 cut(s) 416
PfoI TCCNGGA 1 cut(s) 648
PkrI GCNGC 3 cut(s) 31, 112, 236
PleI GAGTC 1 cut(s) 8
PluTI GGCGCC 1 cut(s) 660
PpsI GAGTC 1 cut(s) 8
PpuMI RGGWCCY 1 cut(s) 124
PshAI GACNNNNGTC 1 cut(s) 248
Psp5II RGGWCCY 1 cut(s) 124
Psp6I CCWGG 1 cut(s) 648
PspFI CCCAGC 3 cut(s) 463, 467, 737
PspGI CCWGG 1 cut(s) 648
PspN4I GGNNCC 4 cut(s) 125, 126, 408, 658
PspPI GGNCC 4 cut(s) 124, 136, 156, 568
PspPPI RGGWCCY 1 cut(s) 124
PvuII CAGCTG 1 cut(s) 467
RsaI GTAC 2 cut(s) 172, 500
RsaNI GTAC 2 cut(s) 171, 499
SacII CCGCGG 1 cut(s) 30
SaqAI TTAA 1 cut(s) 815
SatI GCNGC 3 cut(s) 30, 111, 235
Sau3AI GATC 5 cut(s) 151, 182, 187, 328, 478
Sau96I GGNCC 4 cut(s) 124, 136, 156, 568
SchI GAGTC 1 cut(s) 8
ScrFI CCNGG 1 cut(s) 650
SduI GDGCHC 1 cut(s) 541
SfaNI GCATC 2 cut(s) 84, 363
SfcI CTRYAG 1 cut(s) 588
SfoI GGCGCC 1 cut(s) 658
Sfr303I CCGCGG 1 cut(s) 30
SgrBI CCGCGG 1 cut(s) 30
SinI GGWCC 2 cut(s) 124, 136
SmlI CTYRAG 2 cut(s) 341, 449
SmoI CTYRAG 2 cut(s) 341, 449
Sse9I AATT 4 cut(s) 351, 636, 676, 795
SseBI AGGCCT 1 cut(s) 706
SsiI CCGC 9 cut(s) 27, 29, 73, 128, 143, 246, 264, 273, 800
SspDI GGCGCC 1 cut(s) 656
SspMI CTAG 1 cut(s) 546
StuI AGGCCT 1 cut(s) 706
StyD4I CCNGG 1 cut(s) 648
StyI CCWWGG 1 cut(s) 119
TaaI ACNGT 5 cut(s) 225, 475, 487, 664, 683
TaiI ACGT 1 cut(s) 51
TaqI TCGA 4 cut(s) 78, 87, 240, 327
TasI AATT 4 cut(s) 351, 636, 676, 795
TatI WGTACW 1 cut(s) 498
TauI GCSGC 1 cut(s) 32
TfiI GAWTC 1 cut(s) 195
Tru1I TTAA 1 cut(s) 815
Tru9I TTAA 1 cut(s) 815
TscAI CASTG 2 cut(s) 480, 521
TseFI GTSAC 3 cut(s) 259, 529, 607
TseI GCWGC 2 cut(s) 110, 234
Tsp45I GTSAC 3 cut(s) 259, 529, 607
TspDTI ATGAA 2 cut(s) 621, 684
TspGWI ACGGA 1 cut(s) 383
TspRI CASTG 2 cut(s) 480, 521
Van91I CCANNNNNTGG 1 cut(s) 416
VneI GTGCAC 1 cut(s) 537
VpaK11BI GGWCC 2 cut(s) 124, 136
XspI CTAG 1 cut(s) 546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.