Prupe.2G158300_v2.0.a1
MYB Family

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
21136579 .. 21139205
2627 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G158300.1

Sequence Viewer

Length: 1554 bp
TTCTTTGCAGCTGAATGTGTTCCTGACAGAACAGATGTTCAGTGCCTTCATCGCTGGCAGAAAGTTCTCAATCCTGATCTTGTTAAAGGATTTTGGTCCAAGGAGGAAGATGATCTAATAATTGAGCTGGTCGCGAAGCAGGGCAACAAGAAATGGTCTGAAATAGCAAAGTCCTTGCCAGGTCGCATAGGCAAGCAATGTCGAGAGAGGTGGCACAACCATTTAAATCCAGATATAAAAAGAACTGCATGGACCAAAGCAGAGGAACTGACTCTCATTGAGGCCCATAAGGTTTATGGGAACAAGTGGGCTGAAATAGCAAAGTTTCTTAACGGAAGGAGCGAAAATTCAATTAAAAACCATTGGAACTCCTCAGTGAAGAAGAAGTTAGAACTCCGTTCGTCTCATACTTCTGATATGGGCACTCAAAATATAAAAGCAGAATGCAGAAAGCGTGAGGTGGTAAAGCAAGGCCTTGATCAGAAAGCTAACATGGAAAGAAATGTGGAAACCTGTTCACTGGACCTGAATCTGGTTCTCGGAACTGCAAATAGAAGGGAAAGCCAAATGCAATCTTCTGACAAAAGAAATTGCTGGTGGGCCGCTGCAAACAAAATGATGAAAACACCACCTAGAACCGTATTTTACGACAGAGCTGCAGCTGCATGTGGTCTAAATATTGAACAATGCCAAGAAACTTCTAGTAACTGTGGCAGACTGAGGGACTCTCATAATGTGACTGCTAATAATCGTTACAACAACATTTGCAATACTGCTCCTGATTATCTGGGTTTCCCATTTTCACATACGCGGAACCATAAACCCAGTGATCCTATCTATTTGTTGCCTTCCAGACCACTTCCTAGACCACCACAAGCCTCTTTAAATGCTGGCTTAGGTGTTCCTGGTTGTAAGAGAACAGCTGGTTATTTTATCAACAAACCAGTTCTCCCAGTTACTGCTCAGGGATTGTATGAATCCTCTAGTGGACCTCAAGCTTATGAGAAAAAGATGGATGGTGGAGCTCCTGTGAATTCAAAGAATTCAAGCCATGGTGGCTTGTGCTACAGGCCATTCCAACTCGAGGATGTGGAATTTTATTTGGAAAATGGTGAATTCCCAAGTACAGATAGTTACATCCAGACAGAATGTAGTTCAGTTTCTTTTTGCACTCCAACAAGTCACGATACAAGAATTTTTGTTGATTGTAACAGTCCAGATTCCACATTGAGAAGTGCAGCGAGGACGTTTGAGAAATCTCCATCTATCATAAGAAAACGACGGCATTCAGTTTCCAGAAAAAGTGTCAATGCAGCAAATCATGGTGACAGTGTTTGCTCAAAAGAAATTAGCAATAACTTCAGAAACAGCCCCCACTTGCTAGGTCTAAGTCCATGTGGTAAAACTAATTCCAGTAGCATGGTTCATTCTCCTCCAAGGTCTCAGAAGTTTGGGGATTCTGCTGTCATGAAGTCTGTAGAAAAACGCTTGGAACATGCATTTGATGTTGAATGGGATTCGGCCAGCGCCGTTTCTAGGACCTTATCTCCATGA

Protein Analysis

518

Amino Acids

57.99

Weight (kDa)

9.19

Isoelectric Point (pI)

61.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 134, 811
AciI CCGC 2 cut(s) 603, 811
AclWI GGATC 1 cut(s) 824
AcoI YGGCCR 1 cut(s) 1521
AcsI RAATTY 6 cut(s) 346, 1033, 1042, 1094, 1115, 1194
AcuI CTGAAG 1 cut(s) 1345
AfaI GTAC 1 cut(s) 1126
AfiI CCNNNNNNNGG 3 cut(s) 532, 1084, 1536
AgsI TTSAA 5 cut(s) 351, 683, 1038, 1047, 1511
AjnI CCWGG 2 cut(s) 178, 904
AluBI AGCT 8 cut(s) 11, 127, 488, 656, 662, 923, 998, 1025
AluI AGCT 8 cut(s) 11, 127, 488, 656, 662, 923, 998, 1025
Alw21I GWGCWC 1 cut(s) 1027
Alw26I GTCTC 2 cut(s) 408, 1446
AlwI GGATC 1 cut(s) 824
AlwNI CAGNNNCTG 1 cut(s) 959
Ama87I CYCGRG 1 cut(s) 1082
AoxI GGCC 5 cut(s) 282, 472, 600, 1070, 1521
ApeKI GCWGC 7 cut(s) 8, 605, 656, 659, 662, 1238, 1313
ApoI RAATTY 6 cut(s) 346, 1033, 1042, 1094, 1115, 1194
Asp700I GAANNNNTTC 1 cut(s) 18
AspLEI GCGC 1 cut(s) 1529
AspS9I GGNCC 7 cut(s) 96, 252, 283, 523, 600, 989, 1539
AsuHPI GGTGA 2 cut(s) 1124, 1337
AvaI CYCGRG 1 cut(s) 1082
AvaII GGWCC 5 cut(s) 96, 252, 523, 989, 1539
BaeGI GKGCMC 1 cut(s) 425
BanII GRGCYC 1 cut(s) 1027
Bbv12I GWGCWC 1 cut(s) 1027
BbvI GCAGC 7 cut(s) 20, 592, 643, 649, 671, 1250, 1325
BccI CCATC 3 cut(s) 1006, 1010, 1270
BceAI ACGGC 2 cut(s) 1298, 1514
BcgI CGANNNNNNTGC 2 cut(s) 638, 672
BciT130I CCWGG 2 cut(s) 180, 906
BclI TGATCA 1 cut(s) 478
BcoDI GTCTC 2 cut(s) 408, 1446
BfaI CTAG 6 cut(s) 633, 702, 864, 984, 1382, 1536
BfmI CTRYAG 3 cut(s) 657, 1066, 1476
BfoI RGCGCY 1 cut(s) 1530
BglI GCCNNNNNGGC 1 cut(s) 1056
BisI GCNGC 8 cut(s) 9, 603, 606, 657, 660, 663, 1239, 1314
BlsI GCNGC 8 cut(s) 10, 604, 607, 658, 661, 664, 1240, 1315
Bme1390I CCNGG 2 cut(s) 180, 906
Bme18I GGWCC 5 cut(s) 96, 252, 523, 989, 1539
BmeT110I CYCGRG 1 cut(s) 1082
BmgT120I GGNCC 7 cut(s) 96, 252, 283, 523, 600, 989, 1539
BmiI GGNNCC 1 cut(s) 815
BmrFI CCNGG 2 cut(s) 180, 906
BmrI ACTGGG 2 cut(s) 819, 947
BmuI ACTGGG 2 cut(s) 819, 947
BplI GAGNNNNNCTC 2 cut(s) 712, 744
Bpu10I CCTNAGC 2 cut(s) 895, 963
BpuEI CTTGAG 1 cut(s) 978
BsaI GGTCTC 1 cut(s) 1446
BsaJI CCNNGG 3 cut(s) 99, 1051, 1436
BsaXI ACNNNNNCTCC 5 cut(s) 933, 963, 1014, 1044, 1531
Bsc4I CCNNNNNNNGG 3 cut(s) 532, 1084, 1536
Bse1I ACTGG 5 cut(s) 525, 825, 944, 953, 1413
Bse3DI GCAATG 1 cut(s) 203
BseBI CCWGG 2 cut(s) 180, 906
BseDI CCNNGG 3 cut(s) 99, 1051, 1436
BseGI GGATG 3 cut(s) 1021, 1093, 1137
BseLI CCNNNNNNNGG 3 cut(s) 532, 1084, 1536
BseMI GCAATG 1 cut(s) 203
BseMII CTCAG 4 cut(s) 387, 710, 977, 1457
BseNI ACTGG 5 cut(s) 525, 825, 944, 953, 1413
BseRI GAGGAG 2 cut(s) 361, 1422
BseSI GKGCMC 1 cut(s) 425
BseXI GCAGC 7 cut(s) 20, 592, 643, 649, 671, 1250, 1325
BsgI GTGCAG 1 cut(s) 1257
Bsh1236I CGCG 2 cut(s) 134, 811
BshFI GGCC 5 cut(s) 284, 474, 602, 1072, 1523
BsiHKAI GWGCWC 1 cut(s) 1027
BsiHKCI CYCGRG 1 cut(s) 1082
BslFI GGGAC 1 cut(s) 737
BslI CCNNNNNNNGG 3 cut(s) 532, 1084, 1536
BsmAI GTCTC 2 cut(s) 408, 1446
BsmBI CGTCTC 1 cut(s) 408
BsmFI GGGAC 1 cut(s) 737
BsmI GAATGC 2 cut(s) 449, 1285
BsnI GGCC 5 cut(s) 284, 474, 602, 1072, 1523
Bso31I GGTCTC 1 cut(s) 1446
BsoBI CYCGRG 1 cut(s) 1082
Bsp1286I GDGCHC 2 cut(s) 425, 1027
Bsp143I GATC 4 cut(s) 76, 112, 478, 829
Bsp19I CCATGG 1 cut(s) 1051
Bsp68I TCGCGA 1 cut(s) 134
BspACI CCGC 2 cut(s) 603, 811
BspANI GGCC 5 cut(s) 284, 474, 602, 1072, 1523
BspCNI CTCAG 4 cut(s) 386, 711, 976, 1456
BspFNI CGCG 2 cut(s) 134, 811
BspHI TCATGA 1 cut(s) 1467
BspLI GGNNCC 1 cut(s) 815
BspMAI CTGCAG 1 cut(s) 661
BspPI GGATC 1 cut(s) 824
BspTNI GGTCTC 1 cut(s) 1446
BsrDI GCAATG 1 cut(s) 203
BsrI ACTGG 5 cut(s) 525, 825, 944, 953, 1413
BssECI CCNNGG 3 cut(s) 99, 1051, 1436
BssMI GATC 4 cut(s) 76, 112, 478, 829
BssT1I CCWWGG 3 cut(s) 99, 1051, 1436
Bst2UI CCWGG 2 cut(s) 180, 906
Bst4CI ACNGT 4 cut(s) 640, 710, 1214, 1331
BstC8I GCNNGC 4 cut(s) 56, 194, 892, 1525
BstDEI CTNAG 6 cut(s) 373, 719, 895, 963, 1388, 1443
BstDSI CCRYGG 1 cut(s) 1051
BstF5I GGATG 3 cut(s) 1021, 1093, 1137
BstFNI CGCG 2 cut(s) 134, 811
BstH2I RGCGCY 1 cut(s) 1530
BstHHI GCGC 1 cut(s) 1529
BstKTI GATC 4 cut(s) 79, 115, 481, 832
BstMAI GTCTC 2 cut(s) 408, 1446
BstMBI GATC 4 cut(s) 76, 112, 478, 829
BstMWI GCNNNNNNNGC 4 cut(s) 51, 317, 662, 1056
BstNI CCWGG 2 cut(s) 180, 906
BstNSI RCATGY 2 cut(s) 669, 1499
BstSCI CCNGG 2 cut(s) 178, 904
BstSFI CTRYAG 3 cut(s) 657, 1066, 1476
BstSLI GKGCMC 1 cut(s) 425
BstUI CGCG 2 cut(s) 134, 811
BstV1I GCAGC 7 cut(s) 20, 592, 643, 649, 671, 1250, 1325
BstXI CCANNNNNNTGG 1 cut(s) 1420
BsuRI GGCC 5 cut(s) 284, 474, 602, 1072, 1523
BtgI CCRYGG 1 cut(s) 1051
BtgZI GCGATG 1 cut(s) 35
BtsCI GGATG 3 cut(s) 1021, 1093, 1137
BtsIMutI CAGTG 5 cut(s) 47, 381, 518, 832, 1336
BtuMI TCGCGA 1 cut(s) 134
Cac8I GCNNGC 4 cut(s) 56, 194, 892, 1525
CaiI CAGNNNCTG 1 cut(s) 959
CciI TCATGA 1 cut(s) 1467
CfoI GCGC 1 cut(s) 1529
Cfr13I GGNCC 7 cut(s) 96, 252, 283, 523, 600, 989, 1539
Csp6I GTAC 1 cut(s) 1125
CviQI GTAC 1 cut(s) 1125
DdeI CTNAG 6 cut(s) 373, 719, 895, 963, 1388, 1443
DpnI GATC 4 cut(s) 78, 114, 480, 831
DpnII GATC 4 cut(s) 76, 112, 478, 829
DraI TTTAAA 2 cut(s) 225, 885
EaeI YGGCCR 1 cut(s) 1521
Ecl136II GAGCTC 1 cut(s) 1025
Eco130I CCWWGG 3 cut(s) 99, 1051, 1436
Eco147I AGGCCT 1 cut(s) 474
Eco24I GRGCYC 1 cut(s) 1027
Eco31I GGTCTC 1 cut(s) 1446
Eco47I GGWCC 5 cut(s) 96, 252, 523, 989, 1539
Eco53kI GAGCTC 1 cut(s) 1025
Eco57I CTGAAG 1 cut(s) 1345
Eco88I CYCGRG 1 cut(s) 1082
EcoICRI GAGCTC 1 cut(s) 1025
EcoO109I RGGNCCY 1 cut(s) 1539
EcoRI GAATTC 3 cut(s) 1033, 1042, 1115
EcoRII CCWGG 2 cut(s) 178, 904
EcoT14I CCWWGG 3 cut(s) 99, 1051, 1436
EcoT22I ATGCAT 1 cut(s) 1501
EcoT38I GRGCYC 1 cut(s) 1027
ErhI CCWWGG 3 cut(s) 99, 1051, 1436
Esp3I CGTCTC 1 cut(s) 408
FaqI GGGAC 1 cut(s) 737
FbaI TGATCA 1 cut(s) 478
Fnu4HI GCNGC 8 cut(s) 9, 603, 606, 657, 660, 663, 1239, 1314
FokI GGATG 3 cut(s) 1028, 1100, 1124
FriOI GRGCYC 1 cut(s) 1027
Fsp4HI GCNGC 8 cut(s) 9, 603, 606, 657, 660, 663, 1239, 1314
FspBI CTAG 6 cut(s) 633, 702, 864, 984, 1382, 1536
GlaI GCGC 1 cut(s) 1528
GluI GCNGC 8 cut(s) 9, 603, 606, 657, 660, 663, 1239, 1314
HaeII RGCGCY 1 cut(s) 1530
HaeIII GGCC 5 cut(s) 284, 474, 602, 1072, 1523
HhaI GCGC 1 cut(s) 1529
Hin6I GCGC 1 cut(s) 1527
HinP1I GCGC 1 cut(s) 1527
HindIII AAGCTT 1 cut(s) 996
HinfI GANTC 7 cut(s) 271, 529, 725, 977, 1220, 1457, 1517
HphI GGTGA 2 cut(s) 1124, 1337
Hpy166II GTNNAC 2 cut(s) 518, 989
Hpy188I TCNGA 7 cut(s) 160, 415, 483, 542, 580, 1364, 1446
Hpy8I GTNNAC 2 cut(s) 518, 989
Hpy99I CGWCG 1 cut(s) 1284
HpyAV CCTTC 4 cut(s) 56, 330, 549, 858
HpyCH4III ACNGT 4 cut(s) 640, 710, 1214, 1331
HpyCH4IV ACGT 1 cut(s) 1247
HpyF10VI GCNNNNNNNGC 4 cut(s) 51, 317, 662, 1056
HpyF3I CTNAG 6 cut(s) 373, 719, 895, 963, 1388, 1443
HpySE526I ACGT 1 cut(s) 1247
HspAI GCGC 1 cut(s) 1527
Ksp22I TGATCA 1 cut(s) 478
Kzo9I GATC 4 cut(s) 76, 112, 478, 829
LmnI GCTCC 4 cut(s) 339, 781, 1022, 1030
Lsp1109I GCAGC 7 cut(s) 20, 592, 643, 649, 671, 1250, 1325
MaeI CTAG 6 cut(s) 633, 702, 864, 984, 1382, 1536
MaeII ACGT 1 cut(s) 1247
MaeIII GTNAC 8 cut(s) 704, 736, 752, 955, 1133, 1181, 1208, 1325
MalI GATC 4 cut(s) 78, 114, 480, 831
MboI GATC 4 cut(s) 76, 112, 478, 829
MboII GAAGA 4 cut(s) 119, 391, 394, 567
MhlI GDGCHC 2 cut(s) 425, 1027
MlyI GAGTC 2 cut(s) 265, 719
MmeI TCCRAC 2 cut(s) 1102, 1199
Mph1103I ATGCAT 1 cut(s) 1501
MroXI GAANNNNTTC 1 cut(s) 18
MseI TTAA 5 cut(s) 84, 224, 330, 354, 884
MspA1I CMGCKG 4 cut(s) 11, 605, 662, 923
MspR9I CCNGG 2 cut(s) 180, 906
Mva1269I GAATGC 2 cut(s) 449, 1285
MvaI CCWGG 2 cut(s) 180, 906
MvnI CGCG 2 cut(s) 134, 811
MwoI GCNNNNNNNGC 4 cut(s) 51, 317, 662, 1056
NcoI CCATGG 1 cut(s) 1051
NdeII GATC 4 cut(s) 76, 112, 478, 829
NlaIV GGNNCC 1 cut(s) 815
NmuCI GTSAC 3 cut(s) 736, 1181, 1325
NruI TCGCGA 1 cut(s) 134
NsiI ATGCAT 1 cut(s) 1501
NspI RCATGY 2 cut(s) 669, 1499
PaeR7I CTCGAG 1 cut(s) 1082
PagI TCATGA 1 cut(s) 1467
PceI AGGCCT 1 cut(s) 474
PcsI WCGNNNNNNNCGW 1 cut(s) 339
PctI GAATGC 2 cut(s) 449, 1285
PdmI GAANNNNTTC 1 cut(s) 18
PfeI GAWTC 5 cut(s) 529, 977, 1220, 1457, 1517
PkrI GCNGC 8 cut(s) 10, 604, 607, 658, 661, 664, 1240, 1315
PleI GAGTC 2 cut(s) 265, 719
PpsI GAGTC 2 cut(s) 265, 719
PpuMI RGGWCCY 1 cut(s) 1539
Psp124BI GAGCTC 1 cut(s) 1027
Psp5II RGGWCCY 1 cut(s) 1539
Psp6I CCWGG 2 cut(s) 178, 904
PspGI CCWGG 2 cut(s) 178, 904
PspN4I GGNNCC 1 cut(s) 815
PspPI GGNCC 7 cut(s) 96, 252, 283, 523, 600, 989, 1539
PspPPI RGGWCCY 1 cut(s) 1539
PspXI VCTCGAGB 1 cut(s) 1082
PstI CTGCAG 1 cut(s) 661
PstNI CAGNNNCTG 1 cut(s) 959
PvuII CAGCTG 3 cut(s) 11, 662, 923
RruI TCGCGA 1 cut(s) 134
RsaI GTAC 1 cut(s) 1126
RsaNI GTAC 1 cut(s) 1125
SacI GAGCTC 1 cut(s) 1027
SaqAI TTAA 5 cut(s) 84, 224, 330, 354, 884
SatI GCNGC 8 cut(s) 9, 603, 606, 657, 660, 663, 1239, 1314
Sau3AI GATC 4 cut(s) 76, 112, 478, 829
Sau96I GGNCC 7 cut(s) 96, 252, 283, 523, 600, 989, 1539
SchI GAGTC 2 cut(s) 265, 719
ScrFI CCNGG 2 cut(s) 180, 906
SduI GDGCHC 2 cut(s) 425, 1027
SfcI CTRYAG 3 cut(s) 657, 1066, 1476
Sfr274I CTCGAG 1 cut(s) 1082
SinI GGWCC 5 cut(s) 96, 252, 523, 989, 1539
SlaI CTCGAG 1 cut(s) 1082
SmiI ATTTAAAT 1 cut(s) 225
SmlI CTYRAG 2 cut(s) 993, 1082
SmoI CTYRAG 2 cut(s) 993, 1082
SseBI AGGCCT 1 cut(s) 474
SsiI CCGC 2 cut(s) 603, 811
SspI AATATT 1 cut(s) 679
SspMI CTAG 6 cut(s) 633, 702, 864, 984, 1382, 1536
SstI GAGCTC 1 cut(s) 1027
StuI AGGCCT 1 cut(s) 474
StyD4I CCNGG 2 cut(s) 178, 904
StyI CCWWGG 3 cut(s) 99, 1051, 1436
SwaI ATTTAAAT 1 cut(s) 225
TaaI ACNGT 4 cut(s) 640, 710, 1214, 1331
TaiI ACGT 1 cut(s) 1250
TaqI TCGA 2 cut(s) 202, 1083
TatI WGTACW 1 cut(s) 1124
TauI GCSGC 1 cut(s) 605
TfiI GAWTC 5 cut(s) 529, 977, 1220, 1457, 1517
Tru1I TTAA 5 cut(s) 84, 224, 330, 354, 884
Tru9I TTAA 5 cut(s) 84, 224, 330, 354, 884
TscAI CASTG 5 cut(s) 47, 381, 525, 832, 1336
TseFI GTSAC 3 cut(s) 736, 1181, 1325
TseI GCWGC 7 cut(s) 8, 605, 656, 659, 662, 1238, 1313
Tsp45I GTSAC 3 cut(s) 736, 1181, 1325
TspDTI ATGAA 5 cut(s) 38, 635, 990, 1415, 1484
TspGWI ACGGA 2 cut(s) 348, 386
TspRI CASTG 5 cut(s) 47, 381, 525, 832, 1336
VpaK11BI GGWCC 5 cut(s) 96, 252, 523, 989, 1539
XapI RAATTY 6 cut(s) 346, 1033, 1042, 1094, 1115, 1194
XceI RCATGY 2 cut(s) 669, 1499
XcmI CCANNNNNNNNNTGG 1 cut(s) 293
XhoI CTCGAG 1 cut(s) 1082
XmnI GAANNNNTTC 1 cut(s) 18
XspI CTAG 6 cut(s) 633, 702, 864, 984, 1382, 1536
Zsp2I ATGCAT 1 cut(s) 1501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.