Prupe.2G197500_v2.0.a1

Vacuolar protein sorting-associated protein 8 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
23450287 .. 23459808
9522 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G197500.1

Sequence Viewer

Length: 5763 bp
ATGACCAAGAAGCTGACTCAATTCGAACCACAACTTGCCATGGAACTCGACCTCGACTCCTTCCTCAACTCACACCTTTCCCTCTCCGATGAAGACGACGACGACAACCTTAATTCCGTCCCTCACCGTACGATCGACGAAATCCTCAACGACTCCGATTCGTCCGCGTCATCGTCCCCTCCCTCCACTATCCACCGCCTCGCATCTGATCCCAAACCACCACATCCGCCCACCGACGCCGTATCAGTCTCCAGCGCTAAATCCGACGAGTCCAGTCAAGTCCGGCCGAGGCCCAATTTGTACACTCGGGTCAAGTCCGGCGAGTTATCGGACGATCCGGTCGGAAAGGTTTCGAAGCCGTCGCCATGGTTGCTTGGAGGCATGAGAACAAATGCGAAGCCAGGGGCGGCGCTCGCGGCTGCTGCGGCGGCCTCGAGGTCGATGCCTACGCCGCACGCGGCCGCGATCAAATCGAAGAGGAGTGCCGGGAGTGGAATTTTCCAGAAGGTTCTGGAGAGTACGGAATTGGATGATAAATCCGAGGTAGGGTCCAATTCTAATAATGATACGAATGTAGGAAGTTCTGAAGTGACTGAGTCAAATTCGAATGAAGGAGAAGTGGATTTTGGTGATGAATTGTTGAGAAAAGGTAGGGCTTGGGAGAGGGAGAGGGAGTTAGAGGAAACGTCTCAAGGTATTGAAGTAAGTGCTGGGAATGCTCCGGAAGAAGTGAAAAATGTTAGTTTTGATGAGAATTTGACAAATTTAGATGCAAATGATGTTGAAGATAATGAATTTAACAATAATGTTGAGGTTGTAGAGGAATGTCAACCAGAAATACAAGATATAGATGAAAACAGTCCTGGTTCCAAACATAGTGATAGTGAGGAGGAGCGTCTTGGTGATGGTGGTGGTGGCGGTAATGATAATGACGGTGAGGGTGGTGGTGGTGATGATGACAATAATAATGATCGTGATAGTAATGATGATGGTGAATTGGGAAGTTCAATCACTCAACTTGTGGAGGAGAGAATTGGGCAGTTGGAGAGCAGGAGGATTAGTAAAAAAGCTGAAAAGAAATTGCAGAAGCCTCTCGAAATTGCTGAAGAGCTAGAGAAGAAGCAAGCTTCTACTGCTTTGCATTGGGAAGAAGGTGCTGCTGCTCAACCCATGAGGCTTGAGGGTGTTCGGAGAGGCTCCACCACATTGGGATACTTCAATGTCGATGCTAACAATCCCATTACCAGGACCCTTTCAGCTCCAGCATTACGGCGTGATCATGGTTCACCACAAGTCTTGGCGGTTCATAGTAATTACATTGCAATAGGAATGGCAAGAGGTGCTATTCTTGTTATCCCTAGCAAATACTCTGCTCATAATGCTGATATCATGGATGCAAAGATGCTAATTCTTGGATTGCAAGGAGAACGATCTTATGCTGCAGTGACTTCTATATGCTTCAATCAGCAAGGGGACCTGCTCTTAGCGGGTTATGCTGATGGTCACATTACAGTTTGGGACGTACAGAGGTCATCGGTTGCTAAAGTAATTACTGGAGAACATACAGCTCCAGTTGTACATACACTGTTTTTGGGGCAGGATTCTCAAGTTACACGTCAATTCAAGGCAGTTACCGGTGATAGTAAGGGTCTGGTACTGTTACATTCTTTCTCTGTGGTTCCCCTGCTTAATAGGTTCTCCATTAAAACACAGTGCCTTCTTGATGGACAAAGAACGGGCACAGTGCTGTCAGCTTCACCCCTCCTCTTTGATGAATTCTCTGGAGGGGCTTCACAATCTGCTCAGGGAAATGGGACAGTTACAGGTAGCAGTATTGGTGGTATGATGGGGGGAGTGGTGGGTGGAGATGCAAGTTGGAAACTCTTCAATGAGGGATCTTCTTTGGTTGAAGAAGGTGTGGTCGTATTTGTCACCCATCAAACTGCTCTGGTGGTAAGACTAACTCCCAATTTGGAAGTCTATGCACAACTTTCAAAACCAGAGGGGGTTCGGGAGGGTGCCATGCCTTCTACTGCTTGGAAATGTACAACGCAATCACGCCGTTTACCTGCTAATACTGAAAATATGCCCGCTGAAGTAGTTGAAAGAGTTTCGCTACTTGCAATTGCTTGGGATCGAAAAGTTCAGGTGGCCAAGTTGGTCAAATCAGAGCTGAAAGTATATGGTAAATGGTCTCTTGAAAGTGCAGCCATAGGTGTGGCATGGCTGGATGATCAGATGCTGGTGGTTCTTATGATGACTGGACAACTTTGTTTGTTTGCGAAGGATGGAACTGTAATTCACCAAACAAGTTTTTCTGTAGACGGTTTTGGAGGGGACGATCTTATTGCTTATCATACTCACTTTGTTAATATATTTGGGAATCCTGAAAAAGCTTATCACAATTGTGTAGCTGTAAGAGGAGCTTCTGTATATGTACTTGGACCTATGCATCTTATTGTTTCCCGGCTTCTCCCATGGAAGGAACGAATTCAAGTTTTAAGGAGTGCAGGTGATTGGATGGGTGCCTTGAACATGGCAATGACAATTTATGATGGCCAAGCTCATGGTGTTGTTGACCTTCCTAGAACTCTGGTTGCTGTACAGGAGGCCATAATGTCCTACCTGGTTGAGTTACTTTTGTCATATGTAGAGGAAGTATTTTCATATATATCAGTAGCATTAGGCAACCAAATTGGAATTATGGATCAAGTTGACGACTTAAACAGCAAAAGCAGTTCTGTGCATTCTGAAATAAAAGAGCAATACACCCGTGTCGGTGGAGTTGCAGTTGAATTCTGTGTCCATATCAAGAGGACTGACATACTTTTTGATGAAATCTTTTCCAAGTTTGTAGCTGTTCAACAGAGAGACACATTTTTGGAGCTGTTGGAGCCATATATATTGAAGGACATGCTTGGTTCTCTTCCACCTGAGATTATGCAAGCACTGGTAGAGCATTATAGCCGCAAAGGATGGTTACAGCGTGTTGAACAATGTGTTCTCCACATGGATATTTCATCCTTGGATTTCAATCAGGTTGTTAGGTTATGCCGGGAGCATGGATTGTATAGTGCTCTGGTGTATCTCTTCAATAAAGGTTTGGATGATTTCAGGTCACCTTTAGAGGAACTGTTGGTGGTCTTGCAAAATAGTAAAAAAGAAGGTGCTACTGCCCTTGGTTACCGGATGCTAGTTTATTTGAAGTACTGTTTTTCAGGCCTTGCTTTTCCACCAGGACAGGGAACAATTCCTGCTCCACGCTTGCCATCTCTCAGAACAGAACTTCTGCAATTTTTGTTAGAGGGTTCTGATGCTCCTAATTCAAGAGCAGGAGGAGGAGAATATCTTAACCTGTATCTTCTCTTGGAGCTAGATACTGAAGCTACTTTAGACGTTCTGAGATGTGCGTTCATTGAAGATGAAATCTCAAAACCCGACGTTTCTTCTCATGATTCAGCTGATGCAAATATGGAGCTGCCAGATGGGAATAATTCGATGGCTCAAAGTCAGAATTCAATGGTTCAAAATACAGTAGATACTCTCATTCATATTGTTAGTAAGGGCATCTCCCAAACAGATGGATCTCCTAGCAATGATGAGACTGCATCAACAGTAGAGTGGCCTTCAAAGAAAGACATTGGTGATCTGTTTGAGTTTATTGCGTACTATGTTGCATGTGGAAGAGCTAATGTCTCGAAACATGTACTGTCTCAAATTTTGGAGTACTTGACGTCAGATAATAACTTTCCATCATGGGTTTCTGGAGATACCATAACTTCAAAAAAAAGAGAGAAGCAGGTTCTTGGTCTTCTTGAGGTAGTGCCTGAGACTGATTGGGATTCATCTTATGTGTTACAGCTATGTGAGAAAGCACGATTTTATCAGGTTTGTGGCCTAATTCATAACAGCAGGCATCAGTATCTTGCTGCTCTGGATTGCTACATGAAAGATGTAGATGAACCCATTCATGCCTTCTCCTTTATCAACAAAACATTATTACAGTTGACTGACAATGAATCTGCCGCTTTTCGATCAGAAGTAATTTCTCGAATTCCAGAGCTTTTTGACTTAAACAGAGAAGGCACATTCGTCTTGGTTATCGACCATTTTACTAGTGAAGAAGGTTCACATATCCTCTCTGAACTTCGTTCCCATCCAAAAAGCCTATTCCTTTACTTAAAAACGGTGATTGAGGTTCACTTATCTGGCACACTCGACTTTTCAAGTTTAAGAAAAGATGATCTTGTGAGGGTGAAGGATCAATCAAAAGCAGTTGAGGCTTACTTGGAAAGGATCTGTGATTTCCCAAAGCTTTTGCGTAACAATCCTGTTAATGTGACTGATGATATGATTGAACTTTATCTGGAGCTGTTATGTCAGTATGAGCGCAATTCAGTTCTCAAATTCCTAGAGACTTTTGATAGCTATCGCGTGGAACACTGTTTACGGCTGTGCCAGAAATATGGGATAACAGATGCTGCATCATTCTTGTTGGAAAGGGTTGGTGATGTTGGCAGTGCTCTTTTACTTACACTTTCCACCCTCAATGAAAAATTTATCAAGCTTGATACTGCTGTGGGAAGTCTGGTATCAAGTGGTTCTGCACGTACTGAGCATTTCAGCAATGCTTTAAAATTGGAGGAGGTGAGCGACATTAACAGTATATTGCATGCCTGTATTGGATTGTGCCAACGGAACACCCATCGTTTAAATCCTGATGAATCAGAGGCACTCTGGTTTAGATTACTGGACTCGTTTTGTGAGCCTTTAACGGATTCCCTTAATGCTGGAAGAGTATCTAAAGGAGACGATCTTAAAACAGTGGTAGCTGAGTCATTGGAATCTGAAGAGGATGAGGTGGCGTTTATTATAGAGTGGAGAATCTCAAAGCTCCATAAAGGCGCTCATATCTTAAGAAAAGTGTTCTCTCGGTTCATCAAGGAGATTGTTGAGGGCATGATAGGTTATGTTCGCCTTCCAACCATCATGTCCAAACTCCTTTCTGATAATGGTAGCCAGGAATTTGGTGATTTTAAATTCACAATATTGGGGATGCTTAGCACATATGGCTTCGAAAGAAGAATTCTGGATACTGCCAAGTCCCTGATAGAAGATGATACATTCTACACTATGAGCATACTCAAGAAAGGGGCCTCTCATGGGTATGCCCCTCGGAGTCAAATATGTTGTATATGTGATTGTCTTCTTGACAAGAACTCTTCTAGCTACATTCGCATTTTCAATTGCGGTCATGCAACACATCTTCAATGCGAAGTTTTGGAGAATGGCACATCAAGTAGTAGCTCGTCCTCCGGATGCCCTGTTTGTATGCCTAAGAAGAAATCTCAGAGGTCCAGAAACAAATCTGTCCTTCCAGAGAAGAGTTTAGTGAAGGGGTTTTCTTCAAGAACCCAACAGATACACGGAACAACTGTCCACCCACATGAAAGCAATGCATCAGAGAATACCTATGGGCTTCACCAAATATCACGATTTGAGATGTTGACCAATTTGCAGAGAGACCGAGGATTGGTCGAGATTGAAAACATGCCTCAACTGAGGCTTGCACCTCCAGCTGTGTATCATGAAAAGGTTCAGAAAGGAACTGTTCTTTCACCAGCAGAAAGTAGCAGTGATCTTGCGACAATAGGGAAACAAAGTAAAACCAAGCAACTCAGGGAGCTAAAAGTAAAGGGGTCATCTCTTCGGTTTCCCTTAAAGTCAAACATATTCGGCAAGGAGAAAACCAGCAAGCGGTGA

Protein Analysis

1921

Amino Acids

211.72

Weight (kDa)

5.23

Isoelectric Point (pI)

43.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2501
AasI GACNNNNNNGTC 1 cut(s) 338
AatII GACGTC 1 cut(s) 3737
AbsI CCTCGAGG 1 cut(s) 433
Acc36I ACCTGC 4 cut(s) 1485, 2077, 2501, 3790
AccB1I GGYRCC 2 cut(s) 2018, 2525
AccI GTMKAC 1 cut(s) 2322
AccII CGCG 5 cut(s) 167, 416, 458, 464, 4434
AccIII TCCGGA 2 cut(s) 721, 5315
AclWI GGATC 8 cut(s) 203, 329, 1903, 2142, 2715, 3592, 4269, 4304
AcoI YGGCCR 4 cut(s) 284, 459, 2151, 2557
AcuI CTGAAG 5 cut(s) 606, 1125, 2115, 3402, 4869
AcyI GRCGYC 2 cut(s) 237, 3734
AfeI AGCGCT 1 cut(s) 256
AfiI CCNNNNNNNGG 7 cut(s) 546, 1245, 2482, 3242, 5163, 5533, 5757
AflII CTTAAG 1 cut(s) 4915
AflIII ACRYGT 2 cut(s) 1613, 3703
AgeI ACCGGT 1 cut(s) 1634
AhlI ACTAGT 1 cut(s) 4115
AjiI CACGTC 1 cut(s) 1616
AjnI CCWGG 6 cut(s) 400, 862, 1244, 2625, 3235, 5019
AjuI GAANNNNNNNTTGG 2 cut(s) 609, 641
AleI CACNNNNGTG 1 cut(s) 2406
Alw21I GWGCWC 2 cut(s) 3079, 4525
AlwI GGATC 8 cut(s) 203, 329, 1903, 2142, 2715, 3592, 4269, 4304
AlwNI CAGNNNCTG 2 cut(s) 2242, 4481
Ama87I CYCGRG 2 cut(s) 306, 433
Aor13HI TCCGGA 2 cut(s) 721, 5315
Aor51HI AGCGCT 1 cut(s) 256
ApeKI GCWGC 9 cut(s) 419, 422, 1157, 1160, 1439, 2207, 3478, 3929, 4481
ArsI GACNNNNNNTTYG 2 cut(s) 2813, 2845
AsiGI ACCGGT 1 cut(s) 1634
Asp700I GAANNNNTTC 5 cut(s) 349, 1883, 2490, 3966, 5595
AspLEI GCGC 4 cut(s) 257, 412, 4392, 4907
AspS9I GGNCC 7 cut(s) 291, 549, 1248, 1474, 2444, 5154, 5355
AsuC2I CCSGG 3 cut(s) 487, 2467, 3056
AsuII TTCGAA 4 cut(s) 24, 353, 605, 5076
AvaI CYCGRG 2 cut(s) 306, 433
AvaII GGWCC 5 cut(s) 549, 1248, 1474, 2444, 5355
BaeGI GKGCMC 1 cut(s) 1742
BaeI ACNNNNGTAYC 4 cut(s) 558, 591, 4563, 4596
BalI TGGCCA 2 cut(s) 2153, 2559
BanI GGYRCC 2 cut(s) 2018, 2525
BbsI GAAGAC 3 cut(s) 99, 3803, 5198
Bbv12I GWGCWC 2 cut(s) 3079, 4525
BbvI GCAGC 9 cut(s) 406, 409, 1144, 1147, 1426, 2219, 3465, 3916, 4468
BceAI ACGGC 5 cut(s) 224, 343, 1286, 2046, 4466
BcgI CGANNNNNNTGC 4 cut(s) 424, 458, 2330, 2364
BciT130I CCWGG 6 cut(s) 402, 864, 1246, 2627, 3237, 5021
BciVI GTATCC 2 cut(s) 1205, 5086
BclI TGATCA 2 cut(s) 1276, 2233
BcnI CCSGG 3 cut(s) 487, 2467, 3056
BcuI ACTAGT 1 cut(s) 4115
BfaI CTAG 9 cut(s) 1112, 1359, 2586, 3194, 3374, 3591, 4116, 4412, 5226
BfmI CTRYAG 2 cut(s) 1440, 2319
BfoI RGCGCY 3 cut(s) 258, 413, 4908
BfrI CTTAAG 1 cut(s) 4915
BfuAI ACCTGC 4 cut(s) 1485, 2077, 2501, 3790
BfuI GTATCC 2 cut(s) 1205, 5086
BlpI GCTNAGC 1 cut(s) 5060
BmcAI AGTACT 2 cut(s) 3209, 3728
Bme1390I CCNGG 9 cut(s) 402, 487, 864, 1246, 2467, 2627, 3056, 3237, 5021
Bme18I GGWCC 5 cut(s) 549, 1248, 1474, 2444, 5355
BmeT110I CYCGRG 2 cut(s) 306, 433
BmgBI CACGTC 1 cut(s) 1616
BmgT120I GGNCC 7 cut(s) 291, 549, 1248, 1474, 2444, 5154, 5355
BmrFI CCNGG 9 cut(s) 402, 487, 864, 1246, 2467, 2627, 3056, 3237, 5021
BpiI GAAGAC 3 cut(s) 99, 3803, 5198
BpmI CTGGAG 9 cut(s) 235, 533, 1245, 1554, 1575, 1803, 3786, 4388, 5559
Bpu10I CCTNAGC 1 cut(s) 1803
Bpu1102I GCTNAGC 1 cut(s) 5060
Bpu14I TTCGAA 4 cut(s) 24, 353, 605, 5076
BpuEI CTTGAG 5 cut(s) 675, 1199, 1590, 3836, 5129
BpuMI CCSGG 3 cut(s) 487, 2467, 3056
BsaAI YACGTR 1 cut(s) 4610
BsaBI GATNNNNATC 2 cut(s) 3033, 4428
BsaHI GRCGYC 2 cut(s) 237, 3734
BsaI GGTCTC 2 cut(s) 2199, 5517
BsaWI WCCGGW 5 cut(s) 337, 721, 1634, 3186, 5315
Bsc4I CCNNNNNNNGG 7 cut(s) 546, 1245, 2482, 3242, 5163, 5533, 5757
Bse118I RCCGGY 1 cut(s) 1634
Bse1I ACTGG 6 cut(s) 273, 1558, 1571, 2266, 2955, 4755
Bse3DI GCAATG 5 cut(s) 1317, 2547, 3601, 4633, 5461
Bse8I GATNNNNATC 2 cut(s) 3033, 4428
BseAI TCCGGA 2 cut(s) 721, 5315
BseBI CCWGG 6 cut(s) 402, 864, 1246, 2627, 3237, 5021
BseJI GATNNNNATC 2 cut(s) 3033, 4428
BseLI CCNNNNNNNGG 7 cut(s) 546, 1245, 2482, 3242, 5163, 5533, 5757
BseMI GCAATG 5 cut(s) 1317, 2547, 3601, 4633, 5461
BseNI ACTGG 6 cut(s) 273, 1558, 1571, 2266, 2955, 4755
BseRI GAGGAG 9 cut(s) 493, 902, 905, 1040, 1754, 2436, 3351, 3354, 4658
BseSI GKGCMC 1 cut(s) 1742
BseX3I CGGCCG 2 cut(s) 284, 459
BseXI GCAGC 9 cut(s) 406, 409, 1144, 1147, 1426, 2219, 3465, 3916, 4468
BseYI CCCAGC 1 cut(s) 710
BsgI GTGCAG 3 cut(s) 2226, 2529, 4590
Bsh1236I CGCG 5 cut(s) 167, 416, 458, 464, 4434
Bsh1285I CGRYCG 4 cut(s) 135, 287, 342, 462
BshNI GGYRCC 2 cut(s) 2018, 2525
BshTI ACCGGT 1 cut(s) 1634
BsiEI CGRYCG 4 cut(s) 135, 287, 342, 462
BsiHKAI GWGCWC 2 cut(s) 3079, 4525
BsiHKCI CYCGRG 2 cut(s) 306, 433
BsiWI CGTACG 1 cut(s) 128
BslFI GGGAC 7 cut(s) 104, 160, 1487, 1532, 1828, 2351, 5089
BslI CCNNNNNNNGG 7 cut(s) 546, 1245, 2482, 3242, 5163, 5533, 5757
BsmBI CGTCTC 2 cut(s) 693, 4803
BsmFI GGGAC 7 cut(s) 104, 160, 1487, 1532, 1828, 2351, 5089
BsmI GAATGC 2 cut(s) 721, 2746
Bso31I GGTCTC 2 cut(s) 2199, 5517
BsoBI CYCGRG 2 cut(s) 306, 433
Bsp119I TTCGAA 4 cut(s) 24, 353, 605, 5076
Bsp1286I GDGCHC 3 cut(s) 1742, 3079, 4525
Bsp13I TCCGGA 2 cut(s) 721, 5315
Bsp1407I TGTACA 4 cut(s) 300, 1576, 2045, 2602
Bsp1720I GCTNAGC 1 cut(s) 5060
Bsp19I CCATGG 3 cut(s) 39, 365, 2477
BspEI TCCGGA 2 cut(s) 721, 5315
BspFNI CGCG 5 cut(s) 167, 416, 458, 464, 4434
BspHI TCATGA 2 cut(s) 3451, 5587
BspMAI CTGCAG 1 cut(s) 1444
BspMI ACCTGC 4 cut(s) 1485, 2077, 2501, 3790
BspPI GGATC 8 cut(s) 203, 329, 1903, 2142, 2715, 3592, 4269, 4304
BspQI GCTCTTC 2 cut(s) 1101, 3679
BspT104I TTCGAA 4 cut(s) 24, 353, 605, 5076
BspT107I GGYRCC 2 cut(s) 2018, 2525
BspTI CTTAAG 1 cut(s) 4915
BspTNI GGTCTC 2 cut(s) 2199, 5517
BsrDI GCAATG 5 cut(s) 1317, 2547, 3601, 4633, 5461
BsrFI RCCGGY 1 cut(s) 1634
BsrGI TGTACA 4 cut(s) 300, 1576, 2045, 2602
BsrI ACTGG 6 cut(s) 273, 1558, 1571, 2266, 2955, 4755
BssAI RCCGGY 1 cut(s) 1634
BssNI GRCGYC 2 cut(s) 237, 3734
BssT1I CCWWGG 5 cut(s) 39, 365, 2477, 3024, 3178
Bst2UI CCWGG 6 cut(s) 402, 864, 1246, 2627, 3237, 5021
BstACI GRCGYC 2 cut(s) 237, 3734
BstAFI CTTAAG 1 cut(s) 4915
BstAPI GCANNNNNTGC 1 cut(s) 1340
BstAUI TGTACA 4 cut(s) 300, 1576, 2045, 2602
BstBAI YACGTR 1 cut(s) 4610
BstBI TTCGAA 4 cut(s) 24, 353, 605, 5076
BstDSI CCRYGG 3 cut(s) 39, 365, 2477
BstEII GGTNACC 2 cut(s) 3117, 3182
BstFNI CGCG 5 cut(s) 167, 416, 458, 464, 4434
BstH2I RGCGCY 3 cut(s) 258, 413, 4908
BstHHI GCGC 4 cut(s) 257, 412, 4392, 4907
BstMCI CGRYCG 4 cut(s) 135, 287, 342, 462
BstNI CCWGG 6 cut(s) 402, 864, 1246, 2627, 3237, 5021
BstNSI RCATGY 5 cut(s) 2917, 3681, 3707, 4676, 5554
BstPI GGTNACC 2 cut(s) 3117, 3182
BstSCI CCNGG 9 cut(s) 400, 485, 862, 1244, 2465, 2625, 3054, 3235, 5019
BstSFI CTRYAG 2 cut(s) 1440, 2319
BstSLI GKGCMC 1 cut(s) 1742
BstUI CGCG 5 cut(s) 167, 416, 458, 464, 4434
BstV1I GCAGC 9 cut(s) 406, 409, 1144, 1147, 1426, 2219, 3465, 3916, 4468
BstV2I GAAGAC 3 cut(s) 99, 3803, 5198
BstX2I RGATCY 3 cut(s) 1895, 3584, 4296
BstXI CCANNNNNNTGG 6 cut(s) 1207, 2218, 2567, 3581, 4466, 5027
BstYI RGATCY 3 cut(s) 1895, 3584, 4296
BstZI CGGCCG 2 cut(s) 284, 459
BsuI GTATCC 2 cut(s) 1205, 5086
BtgI CCRYGG 3 cut(s) 39, 365, 2477
BtrI CACGTC 1 cut(s) 1616
BtsI GCAGTG 3 cut(s) 1449, 4525, 5641
BtsIMutI CAGTG 9 cut(s) 1449, 1583, 1718, 1749, 2948, 4441, 4525, 4830, 5641
BveI ACCTGC 4 cut(s) 1485, 2077, 2501, 3790
CaiI CAGNNNCTG 2 cut(s) 2242, 4481
CciI TCATGA 2 cut(s) 3451, 5587
CciNI GCGGCCGC 1 cut(s) 459
CfoI GCGC 4 cut(s) 257, 412, 4392, 4907
Cfr10I RCCGGY 1 cut(s) 1634
Cfr13I GGNCC 7 cut(s) 291, 549, 1248, 1474, 2444, 5154, 5355
CseI GACGC 3 cut(s) 156, 245, 884
CsiI ACCWGGT 1 cut(s) 2625
CspAI ACCGGT 1 cut(s) 1634
CspCI CAANNNNNGTGG 2 cut(s) 1278, 1313
DraI TTTAAA 3 cut(s) 4635, 4713, 5038
DrdI GACNNNNNNGTC 1 cut(s) 338
DseDI GACNNNNNNGTC 1 cut(s) 338
EaeI YGGCCR 4 cut(s) 284, 459, 2151, 2557
EagI CGGCCG 2 cut(s) 284, 459
EciI GGCGGA 1 cut(s) 216
EclXI CGGCCG 2 cut(s) 284, 459
Eco130I CCWWGG 5 cut(s) 39, 365, 2477, 3024, 3178
Eco147I AGGCCT 1 cut(s) 3222
Eco31I GGTCTC 2 cut(s) 2199, 5517
Eco32I GATATC 1 cut(s) 1387
Eco47I GGWCC 5 cut(s) 549, 1248, 1474, 2444, 5355
Eco47III AGCGCT 1 cut(s) 256
Eco52I CGGCCG 2 cut(s) 284, 459
Eco57I CTGAAG 5 cut(s) 606, 1125, 2115, 3402, 4869
Eco88I CYCGRG 2 cut(s) 306, 433
Eco91I GGTNACC 2 cut(s) 3117, 3182
EcoO109I RGGNCCY 3 cut(s) 1248, 1474, 5154
EcoO65I GGTNACC 2 cut(s) 3117, 3182
EcoRI GAATTC 6 cut(s) 1775, 2490, 2795, 3514, 4053, 5085
EcoRII CCWGG 6 cut(s) 400, 862, 1244, 2625, 3235, 5019
EcoRV GATATC 1 cut(s) 1387
EcoT14I CCWWGG 5 cut(s) 39, 365, 2477, 3024, 3178
EcoT22I ATGCAT 2 cut(s) 2454, 5461
ErhI CCWWGG 5 cut(s) 39, 365, 2477, 3024, 3178
Esp3I CGTCTC 2 cut(s) 693, 4803
FalI AAGNNNNNCTT 4 cut(s) 2410, 2442, 4230, 4262
FaqI GGGAC 7 cut(s) 104, 160, 1487, 1532, 1828, 2351, 5089
FauI CCCGC 2 cut(s) 1480, 2098
FauNDI CATATG 2 cut(s) 2647, 5068
FbaI TGATCA 2 cut(s) 1276, 2233
FblI GTMKAC 1 cut(s) 2322
FspBI CTAG 9 cut(s) 1112, 1359, 2586, 3194, 3374, 3591, 4116, 4412, 5226
GlaI GCGC 4 cut(s) 256, 411, 4391, 4906
GsaI CCCAGC 1 cut(s) 714
GsuI CTGGAG 9 cut(s) 235, 533, 1245, 1554, 1575, 1803, 3786, 4388, 5559
HaeII RGCGCY 3 cut(s) 258, 413, 4908
HgaI GACGC 3 cut(s) 156, 245, 884
HhaI GCGC 4 cut(s) 257, 412, 4392, 4907
Hin1I GRCGYC 2 cut(s) 237, 3734
Hin6I GCGC 4 cut(s) 255, 410, 4390, 4905
HinP1I GCGC 4 cut(s) 255, 410, 4390, 4905
HincII GTYRAC 5 cut(s) 830, 2578, 2716, 4008, 5508
HindII GTYRAC 5 cut(s) 830, 2578, 2716, 4008, 5508
HindIII AAGCTT 4 cut(s) 1125, 2394, 4313, 4565
Hpy99I CGWCG 7 cut(s) 101, 104, 140, 239, 269, 364, 3443
HpyCH4IV ACGT 7 cut(s) 686, 1521, 1615, 3396, 3441, 3734, 4609
HpySE526I ACGT 7 cut(s) 686, 1521, 1615, 3396, 3441, 3734, 4609
Hsp92I GRCGYC 2 cut(s) 237, 3734
HspAI GCGC 4 cut(s) 255, 410, 4390, 4905
Kpn2I TCCGGA 2 cut(s) 721, 5315
Ksp22I TGATCA 2 cut(s) 1276, 2233
LguI GCTCTTC 2 cut(s) 1101, 3679
Lsp1109I GCAGC 9 cut(s) 406, 409, 1144, 1147, 1426, 2219, 3465, 3916, 4468
MabI ACCWGGT 1 cut(s) 2625
MaeI CTAG 9 cut(s) 1112, 1359, 2586, 3194, 3374, 3591, 4116, 4412, 5226
MaeII ACGT 7 cut(s) 686, 1521, 1615, 3396, 3441, 3734, 4609
MfeI CAATTG 3 cut(s) 2124, 2404, 5245
MflI RGATCY 3 cut(s) 1895, 3584, 4296
MhlI GDGCHC 3 cut(s) 1742, 3079, 4525
MlsI TGGCCA 2 cut(s) 2153, 2559
MluNI TGGCCA 2 cut(s) 2153, 2559
MlyI GAGTC 8 cut(s) 10, 50, 146, 278, 605, 4748, 4844, 5188
MmeI TCCRAC 7 cut(s) 288, 322, 1023, 1856, 2871, 4476, 5006
Mox20I TGGCCA 2 cut(s) 2153, 2559
Mph1103I ATGCAT 2 cut(s) 2454, 5461
MroI TCCGGA 2 cut(s) 721, 5315
MroXI GAANNNNTTC 5 cut(s) 349, 1883, 2490, 3966, 5595
MscI TGGCCA 2 cut(s) 2153, 2559
MslI CAYNNNNRTG 5 cut(s) 2216, 2406, 2540, 5166, 5445
Msp20I TGGCCA 2 cut(s) 2153, 2559
MspA1I CMGCKG 3 cut(s) 2093, 3461, 5579
MspCI CTTAAG 1 cut(s) 4915
MspR9I CCNGG 9 cut(s) 402, 487, 864, 1246, 2467, 2627, 3056, 3237, 5021
MunI CAATTG 3 cut(s) 2124, 2404, 5245
Mva1269I GAATGC 2 cut(s) 721, 2746
MvaI CCWGG 6 cut(s) 402, 864, 1246, 2627, 3237, 5021
MvnI CGCG 5 cut(s) 167, 416, 458, 464, 4434
NciI CCSGG 3 cut(s) 487, 2467, 3056
NcoI CCATGG 3 cut(s) 39, 365, 2477
NdeI CATATG 2 cut(s) 2647, 5068
NmeAIII GCCGAG 1 cut(s) 312
NmuCI GTSAC 6 cut(s) 589, 1444, 1502, 1930, 3117, 4339
NotI GCGGCCGC 1 cut(s) 459
NsiI ATGCAT 2 cut(s) 2454, 5461
NspI RCATGY 5 cut(s) 2917, 3681, 3707, 4676, 5554
NspV TTCGAA 4 cut(s) 24, 353, 605, 5076
OliI CACNNNNGTG 1 cut(s) 2406
PaeI GCATGC 1 cut(s) 4676
PaeR7I CTCGAG 1 cut(s) 433
PagI TCATGA 2 cut(s) 3451, 5587
PaqCI CACCTGC 1 cut(s) 2501
PceI AGGCCT 1 cut(s) 3222
PciI ACATGT 1 cut(s) 3703
PciSI GCTCTTC 2 cut(s) 1101, 3679
PctI GAATGC 2 cut(s) 721, 2746
PdmI GAANNNNTTC 5 cut(s) 349, 1883, 2490, 3966, 5595
Pfl23II CGTACG 1 cut(s) 128
PflFI GACNNNGTC 1 cut(s) 595
PinAI ACCGGT 1 cut(s) 1634
Ple19I CGATCG 1 cut(s) 135
PleI GAGTC 8 cut(s) 10, 50, 146, 277, 604, 4748, 4843, 5187
PpsI GAGTC 8 cut(s) 10, 50, 146, 277, 604, 4748, 4843, 5187
Ppu21I YACGTR 1 cut(s) 4610
PpuMI RGGWCCY 2 cut(s) 1248, 1474
PscI ACATGT 1 cut(s) 3703
Psp5II RGGWCCY 2 cut(s) 1248, 1474
Psp6I CCWGG 6 cut(s) 400, 862, 1244, 2625, 3235, 5019
PspEI GGTNACC 2 cut(s) 3117, 3182
PspFI CCCAGC 1 cut(s) 710
PspGI CCWGG 6 cut(s) 400, 862, 1244, 2625, 3235, 5019
PspLI CGTACG 1 cut(s) 128
PspPI GGNCC 7 cut(s) 291, 549, 1248, 1474, 2444, 5154, 5355
PspPPI RGGWCCY 2 cut(s) 1248, 1474
PspXI VCTCGAGB 1 cut(s) 433
PsrI GAACNNNNNNTAC 2 cut(s) 4431, 4463
PstI CTGCAG 1 cut(s) 1444
PstNI CAGNNNCTG 2 cut(s) 2242, 4481
PsuI RGATCY 3 cut(s) 1895, 3584, 4296
PsyI GACNNNGTC 1 cut(s) 595
PvuI CGATCG 1 cut(s) 135
PvuII CAGCTG 2 cut(s) 3461, 5579
RseI CAYNNNNRTG 5 cut(s) 2216, 2406, 2540, 5166, 5445
SapI GCTCTTC 2 cut(s) 1101, 3679
Sau96I GGNCC 7 cut(s) 291, 549, 1248, 1474, 2444, 5154, 5355
ScaI AGTACT 2 cut(s) 3209, 3728
SchI GAGTC 8 cut(s) 10, 50, 146, 278, 605, 4748, 4844, 5188
ScrFI CCNGG 9 cut(s) 402, 487, 864, 1246, 2467, 2627, 3056, 3237, 5021
SduI GDGCHC 3 cut(s) 1742, 3079, 4525
SexAI ACCWGGT 1 cut(s) 2625
SfcI CTRYAG 2 cut(s) 1440, 2319
Sfr274I CTCGAG 1 cut(s) 433
SfuI TTCGAA 4 cut(s) 24, 353, 605, 5076
SinI GGWCC 5 cut(s) 549, 1248, 1474, 2444, 5355
SlaI CTCGAG 1 cut(s) 433
SmiMI CAYNNNNRTG 5 cut(s) 2216, 2406, 2540, 5166, 5445
SmlI CTYRAG 7 cut(s) 433, 690, 1178, 1605, 3815, 4915, 5144
SmoI CTYRAG 7 cut(s) 433, 690, 1178, 1605, 3815, 4915, 5144
SpeI ACTAGT 1 cut(s) 4115
SphI GCATGC 1 cut(s) 4676
SseBI AGGCCT 1 cut(s) 3222
SspI AATATT 1 cut(s) 5049
SspMI CTAG 9 cut(s) 1112, 1359, 2586, 3194, 3374, 3591, 4116, 4412, 5226
StuI AGGCCT 1 cut(s) 3222
StyD4I CCNGG 9 cut(s) 400, 485, 862, 1244, 2465, 2625, 3054, 3235, 5019
StyI CCWWGG 5 cut(s) 39, 365, 2477, 3024, 3178
TaiI ACGT 7 cut(s) 689, 1524, 1618, 3399, 3444, 3737, 4612
TaqII GACCGA 1 cut(s) 5541
TatI WGTACW 8 cut(s) 300, 1576, 2045, 2437, 2602, 3207, 3706, 3726
TauI GCSGC 9 cut(s) 410, 419, 428, 431, 454, 461, 464, 2970, 4028
TscAI CASTG 9 cut(s) 1449, 1590, 1718, 1749, 2955, 4448, 4525, 4830, 5641
TseFI GTSAC 6 cut(s) 589, 1444, 1502, 1930, 3117, 4339
TseI GCWGC 9 cut(s) 419, 422, 1157, 1160, 1439, 2207, 3478, 3929, 4481
Tsp45I GTSAC 6 cut(s) 589, 1444, 1502, 1930, 3117, 4339
TspGWI ACGGA 5 cut(s) 106, 536, 4711, 4790, 5442
TspRI CASTG 9 cut(s) 1449, 1590, 1718, 1749, 2955, 4448, 4525, 4830, 5641
Tth111I GACNNNGTC 1 cut(s) 595
Vha464I CTTAAG 1 cut(s) 4915
VpaK11BI GGWCC 5 cut(s) 549, 1248, 1474, 2444, 5355
XceI RCATGY 5 cut(s) 2917, 3681, 3707, 4676, 5554
XhoI CTCGAG 1 cut(s) 433
XmiI GTMKAC 1 cut(s) 2322
XmnI GAANNNNTTC 5 cut(s) 349, 1883, 2490, 3966, 5595
XspI CTAG 9 cut(s) 1112, 1359, 2586, 3194, 3374, 3591, 4116, 4412, 5226
ZraI GACGTC 1 cut(s) 3735
ZrmI AGTACT 2 cut(s) 3209, 3728
Zsp2I ATGCAT 2 cut(s) 2454, 5461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.