Prupe.2G197700_v2.0.a1

The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
23464025 .. 23466889
2865 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G197700.1

Sequence Viewer

Length: 1299 bp
ATGTCCTTCTCTGCCACCAATTTGGCCCAGCCCCTCCAACTCAACACCGCCACCCCCAGATCCAATGACAAGCCCTCCTTGTTGTTGCCCAAGACCTCATCTTTTCTCGGATCCACCCGCAACTTCCGACCCACTTCCTTATCTGCTAACCCCAGTCACTCGAATGCCCACCGTCGATCCGCTGTCGTTGCTGTCTCCGAAGCTGTGAAGGAGAAGAAGCTCCATGCATCCACCAATCTGCTTATAACAAAAGAGGAAGGCTTGGAGCTGTATGAAGACATGGTATTGGGTAGGTCTTTTGAGGACATGTGTGCTCAGATGTATTATAGAGGCAAGATGTTCGGGTTTGTTCATCTTTACAATGGCCAAGAAGCTGTGTCAACTGGGTTTATCAAGCTTACAAAGAAGGAAGATTCAGTGGTGAGCACTTATCGTGATCACGTACACTCCTTGAGTAAGGGTGTACCTGCTCGTGAGGTGATGAGTGAGCTCTTTGGAAAGGCCACTGGTTGTTGCCGAGGCCAAGGTGGTTCAATGCACATGTTTTCAAAAGAGTACAATGTGCTTGGTGGGTTTGCATTTATTGGTGAAGGGATACCAGTAGCAACAGGTGCAGCATTCTCCTCTAGATACAGGAGGGAAGTGCTGAAACAAGCAGACTGTGATCACGTGACATTGGCCTTTTTCGGAGATGGGACTGCTAATAATGGCCAGTTCTTTGAGTGTTTGAACATGGCAGCATTGTGGAAATTGCCAATTGTTTTTGTTGTGGAGAACAATTTGTGGGCTATTGGAATGTCACATTTGAGGGCTACTTCTGATCCAGAAATTTGGAAGAAGGGCCCTGCATTTGGTATGCCTGGTGTTCATGTGGATGGGATGGATGTTTTGAAGGTGAGGGAGGTGGCAAAGGAGGCGATTGGAAGGGCCAGGAGAGGAGAAGGGCCAACATTGGTGGAATGTGAAACATACAGGTTCAGAGGACATTCATTGGCTGATCCCGATGAGCTTCGTGACCCTGCTGAGAAGGCACACTATGCTGCCAGAGACCCCATCACAGCCTTAAAGAAATACATACTTGAGAACAATTTGGCCACTGAACAAGAGTTGAAGGCCATACATAAGAAGATTGATGAGTTGGTTGAGGATGCCGTTGAGTTCGCAGATGAGAGCCCACTTCCACCTCGCAGCCAGCTGCTCGAGAATGTGTTTGCCGATCCAAAGGGTTTTGGAATCGGCCCTGATGGCAGCTACAGATGTGAAGATCCTAAGTTCACTCAGGGCACTGCTCATGTCTAA

Protein Analysis

433

Amino Acids

47.63

Weight (kDa)

6.55

Isoelectric Point (pI)

37.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 245
Acc36I ACCTGC 1 cut(s) 475
AciI CCGC 3 cut(s) 48, 118, 180
AclWI GGATC 8 cut(s) 54, 105, 118, 171, 815, 992, 1211, 1259
AcoI YGGCCR 3 cut(s) 364, 709, 1092
AcsI RAATTY 1 cut(s) 828
AcvI CACGTG 1 cut(s) 670
AfaI GTAC 3 cut(s) 444, 465, 557
AfiI CCNNNNNNNGG 1 cut(s) 851
AflIII ACRYGT 2 cut(s) 306, 540
AgsI TTSAA 5 cut(s) 534, 549, 730, 892, 1111
AjnI CCWGG 2 cut(s) 859, 929
AluBI AGCT 9 cut(s) 203, 220, 268, 374, 397, 490, 1009, 1195, 1251
AluI AGCT 9 cut(s) 203, 220, 268, 374, 397, 490, 1009, 1195, 1251
Alw21I GWGCWC 3 cut(s) 316, 428, 492
Alw26I GTCTC 2 cut(s) 199, 1041
AlwI GGATC 8 cut(s) 54, 105, 118, 171, 815, 992, 1211, 1259
Ama87I CYCGRG 1 cut(s) 1199
ApaI GGGCCC 1 cut(s) 845
ApeKI GCWGC 6 cut(s) 614, 737, 1040, 1188, 1195, 1248
ApoI RAATTY 1 cut(s) 828
AspS9I GGNCC 6 cut(s) 25, 841, 842, 927, 944, 1238
AsuHPI GGTGA 4 cut(s) 433, 490, 599, 907
AvaI CYCGRG 1 cut(s) 1199
BaeGI GKGCMC 2 cut(s) 845, 1286
BalI TGGCCA 3 cut(s) 366, 711, 1094
BamHI GGATCC 1 cut(s) 110
BanII GRGCYC 3 cut(s) 492, 845, 1175
BauI CACGAG 1 cut(s) 471
BbrPI CACGTG 1 cut(s) 670
BbsI GAAGAC 1 cut(s) 282
Bbv12I GWGCWC 3 cut(s) 316, 428, 492
BbvI GCAGC 6 cut(s) 626, 749, 1027, 1182, 1200, 1260
BccI CCATC 5 cut(s) 686, 869, 874, 1061, 1238
BceAI ACGGC 1 cut(s) 1136
BcgI CGANNNNNNTGC 2 cut(s) 322, 356
BciT130I CCWGG 2 cut(s) 861, 931
BciVI GTATCC 1 cut(s) 588
BclI TGATCA 2 cut(s) 436, 664
BcoDI GTCTC 2 cut(s) 199, 1041
BfaI CTAG 1 cut(s) 627
BfmI CTRYAG 1 cut(s) 1252
BfuAI ACCTGC 1 cut(s) 475
BfuI GTATCC 1 cut(s) 588
BglI GCCNNNNNGGC 1 cut(s) 1245
BisI GCNGC 6 cut(s) 615, 738, 1041, 1189, 1196, 1249
BlsI GCNGC 6 cut(s) 616, 739, 1042, 1190, 1197, 1250
Bme1390I CCNGG 2 cut(s) 861, 931
BmeT110I CYCGRG 1 cut(s) 1199
BmgT120I GGNCC 6 cut(s) 25, 841, 842, 927, 944, 1238
BmiI GGNNCC 2 cut(s) 112, 843
BmrFI CCNGG 2 cut(s) 861, 931
BmrI ACTGGG 2 cut(s) 147, 393
BmsI GCATC 2 cut(s) 236, 1138
BmuI ACTGGG 2 cut(s) 147, 393
BpiI GAAGAC 1 cut(s) 282
BpuEI CTTGAG 2 cut(s) 472, 1100
BsaAI YACGTR 2 cut(s) 442, 670
BsaI GGTCTC 1 cut(s) 1041
BsaJI CCNNGG 2 cut(s) 517, 523
BsaXI ACNNNNNCTCC 4 cut(s) 59, 89, 431, 461
Bsc4I CCNNNNNNNGG 1 cut(s) 851
Bse1I ACTGG 5 cut(s) 153, 388, 511, 599, 712
BseBI CCWGG 2 cut(s) 861, 931
BseDI CCNNGG 2 cut(s) 517, 523
BseGI GGATG 5 cut(s) 227, 880, 885, 889, 1153
BseLI CCNNNNNNNGG 1 cut(s) 851
BseMII CTCAG 3 cut(s) 329, 1014, 1292
BseNI ACTGG 5 cut(s) 153, 388, 511, 599, 712
BseRI GAGGAG 2 cut(s) 613, 951
BseSI GKGCMC 2 cut(s) 845, 1286
BseXI GCAGC 6 cut(s) 626, 749, 1027, 1182, 1200, 1260
BseYI CCCAGC 1 cut(s) 27
BsgI GTGCAG 1 cut(s) 633
BsiHKAI GWGCWC 3 cut(s) 316, 428, 492
BsiHKCI CYCGRG 1 cut(s) 1199
BslFI GGGAC 1 cut(s) 709
BslI CCNNNNNNNGG 1 cut(s) 851
BsmAI GTCTC 2 cut(s) 199, 1041
BsmFI GGGAC 1 cut(s) 709
BsmI GAATGC 2 cut(s) 169, 617
Bso31I GGTCTC 1 cut(s) 1041
BsoBI CYCGRG 1 cut(s) 1199
Bsp120I GGGCCC 1 cut(s) 841
Bsp1286I GDGCHC 6 cut(s) 316, 428, 492, 845, 1175, 1286
Bsp143I GATC 9 cut(s) 59, 110, 176, 436, 664, 820, 997, 1216, 1264
BspACI CCGC 3 cut(s) 48, 118, 180
BspCNI CTCAG 3 cut(s) 328, 1015, 1291
BspLI GGNNCC 2 cut(s) 112, 843
BspMI ACCTGC 1 cut(s) 475
BspPI GGATC 8 cut(s) 54, 105, 118, 171, 815, 992, 1211, 1259
BspTNI GGTCTC 1 cut(s) 1041
BsrI ACTGG 5 cut(s) 153, 388, 511, 599, 712
BssECI CCNNGG 2 cut(s) 517, 523
BssMI GATC 9 cut(s) 59, 110, 176, 436, 664, 820, 997, 1216, 1264
BssSI CACGAG 1 cut(s) 471
BssT1I CCWWGG 1 cut(s) 523
Bst2BI CACGAG 1 cut(s) 471
Bst2UI CCWGG 2 cut(s) 861, 931
Bst4CI ACNGT 2 cut(s) 173, 662
BstAPI GCANNNNNTGC 2 cut(s) 611, 1037
BstBAI YACGTR 2 cut(s) 442, 670
BstC8I GCNNGC 1 cut(s) 1193
BstDEI CTNAG 4 cut(s) 315, 1023, 1269, 1278
BstF5I GGATG 5 cut(s) 227, 880, 885, 889, 1153
BstKTI GATC 9 cut(s) 62, 113, 179, 439, 667, 823, 1000, 1219, 1267
BstMAI GTCTC 2 cut(s) 199, 1041
BstMBI GATC 9 cut(s) 59, 110, 176, 436, 664, 820, 997, 1216, 1264
BstMWI GCNNNNNNNGC 6 cut(s) 188, 611, 914, 1028, 1037, 1245
BstNI CCWGG 2 cut(s) 861, 931
BstNSI RCATGY 2 cut(s) 310, 544
BstSCI CCNGG 2 cut(s) 859, 929
BstSFI CTRYAG 1 cut(s) 1252
BstSLI GKGCMC 2 cut(s) 845, 1286
BstV1I GCAGC 6 cut(s) 626, 749, 1027, 1182, 1200, 1260
BstV2I GAAGAC 1 cut(s) 282
BstX2I RGATCY 3 cut(s) 59, 110, 1264
BstXI CCANNNNNNTGG 2 cut(s) 22, 831
BstYI RGATCY 3 cut(s) 59, 110, 1264
BsuI GTATCC 1 cut(s) 588
BtsCI GGATG 5 cut(s) 227, 880, 885, 889, 1153
BtsI GCAGTG 1 cut(s) 1284
BtsIMutI CAGTG 4 cut(s) 423, 504, 1095, 1284
BveI ACCTGC 1 cut(s) 475
Cac8I GCNNGC 1 cut(s) 1193
Cfr13I GGNCC 6 cut(s) 25, 841, 842, 927, 944, 1238
Csp6I GTAC 3 cut(s) 443, 464, 556
CspCI CAANNNNNGTGG 2 cut(s) 936, 971
CviAII CATG 7 cut(s) 224, 280, 307, 541, 733, 869, 1292
CviQI GTAC 3 cut(s) 443, 464, 556
DdeI CTNAG 4 cut(s) 315, 1023, 1269, 1278
DpnI GATC 9 cut(s) 61, 112, 178, 438, 666, 822, 999, 1218, 1266
DpnII GATC 9 cut(s) 59, 110, 176, 436, 664, 820, 997, 1216, 1264
EaeI YGGCCR 3 cut(s) 364, 709, 1092
Ecl136II GAGCTC 1 cut(s) 490
Eco130I CCWWGG 1 cut(s) 523
Eco24I GRGCYC 3 cut(s) 492, 845, 1175
Eco31I GGTCTC 1 cut(s) 1041
Eco53kI GAGCTC 1 cut(s) 490
Eco72I CACGTG 1 cut(s) 670
Eco88I CYCGRG 1 cut(s) 1199
EcoICRI GAGCTC 1 cut(s) 490
EcoO109I RGGNCCY 2 cut(s) 841, 842
EcoRII CCWGG 2 cut(s) 859, 929
EcoT14I CCWWGG 1 cut(s) 523
EcoT22I ATGCAT 1 cut(s) 229
EcoT38I GRGCYC 3 cut(s) 492, 845, 1175
ErhI CCWWGG 1 cut(s) 523
FaeI CATG 7 cut(s) 227, 283, 310, 544, 736, 872, 1295
FalI AAGNNNNNCTT 2 cut(s) 62, 94
FaqI GGGAC 1 cut(s) 709
FatI CATG 7 cut(s) 223, 279, 306, 540, 732, 868, 1291
FauI CCCGC 1 cut(s) 125
FbaI TGATCA 2 cut(s) 436, 664
Fnu4HI GCNGC 6 cut(s) 615, 738, 1041, 1189, 1196, 1249
FokI GGATG 5 cut(s) 214, 887, 892, 896, 1160
FriOI GRGCYC 3 cut(s) 492, 845, 1175
Fsp4HI GCNGC 6 cut(s) 615, 738, 1041, 1189, 1196, 1249
FspBI CTAG 1 cut(s) 627
GluI GCNGC 6 cut(s) 615, 738, 1041, 1189, 1196, 1249
GsaI CCCAGC 1 cut(s) 31
Hin1II CATG 7 cut(s) 227, 283, 310, 544, 736, 872, 1295
HincII GTYRAC 1 cut(s) 381
HindII GTYRAC 1 cut(s) 381
HindIII AAGCTT 1 cut(s) 395
HinfI GANTC 2 cut(s) 413, 1233
HphI GGTGA 4 cut(s) 433, 490, 599, 907
Hpy166II GTNNAC 4 cut(s) 381, 445, 464, 1275
Hpy188I TCNGA 7 cut(s) 110, 128, 199, 318, 689, 820, 980
Hpy188III TCNNGA 7 cut(s) 434, 473, 627, 824, 1001, 1013, 1201
Hpy8I GTNNAC 4 cut(s) 381, 445, 464, 1275
Hpy99I CGWCG 1 cut(s) 177
HpyCH4III ACNGT 2 cut(s) 173, 662
HpyCH4IV ACGT 2 cut(s) 441, 669
HpyCH4V TGCA 5 cut(s) 227, 538, 578, 614, 848
HpyF10VI GCNNNNNNNGC 6 cut(s) 188, 611, 914, 1028, 1037, 1245
HpyF3I CTNAG 4 cut(s) 315, 1023, 1269, 1278
HpySE526I ACGT 2 cut(s) 441, 669
Hsp92II CATG 7 cut(s) 227, 283, 310, 544, 736, 872, 1295
Ksp22I TGATCA 2 cut(s) 436, 664
Kzo9I GATC 9 cut(s) 59, 110, 176, 436, 664, 820, 997, 1216, 1264
LmnI GCTCC 2 cut(s) 225, 265
Lsp1109I GCAGC 6 cut(s) 626, 749, 1027, 1182, 1200, 1260
LweI GCATC 2 cut(s) 236, 1138
MaeI CTAG 1 cut(s) 627
MaeII ACGT 2 cut(s) 441, 669
MaeIII GTNAC 4 cut(s) 155, 670, 798, 1013
MalI GATC 9 cut(s) 61, 112, 178, 438, 666, 822, 999, 1218, 1266
MboI GATC 9 cut(s) 59, 110, 176, 436, 664, 820, 997, 1216, 1264
MboII GAAGA 6 cut(s) 226, 287, 422, 847, 1138, 1274
MfeI CAATTG 1 cut(s) 756
MflI RGATCY 3 cut(s) 59, 110, 1264
MhlI GDGCHC 6 cut(s) 316, 428, 492, 845, 1175, 1286
MlsI TGGCCA 3 cut(s) 366, 711, 1094
MluCI AATT 6 cut(s) 19, 749, 756, 778, 828, 1087
MluNI TGGCCA 3 cut(s) 366, 711, 1094
MmeI TCCRAC 2 cut(s) 61, 151
Mox20I TGGCCA 3 cut(s) 366, 711, 1094
Mph1103I ATGCAT 1 cut(s) 229
MscI TGGCCA 3 cut(s) 366, 711, 1094
MseI TTAA 1 cut(s) 1064
MslI CAYNNNNRTG 2 cut(s) 162, 873
Msp20I TGGCCA 3 cut(s) 366, 711, 1094
MspA1I CMGCKG 2 cut(s) 182, 1195
MspR9I CCNGG 2 cut(s) 861, 931
MunI CAATTG 1 cut(s) 756
Mva1269I GAATGC 2 cut(s) 169, 617
MvaI CCWGG 2 cut(s) 861, 931
MwoI GCNNNNNNNGC 6 cut(s) 188, 611, 914, 1028, 1037, 1245
NdeII GATC 9 cut(s) 59, 110, 176, 436, 664, 820, 997, 1216, 1264
NlaIII CATG 7 cut(s) 227, 283, 310, 544, 736, 872, 1295
NlaIV GGNNCC 2 cut(s) 112, 843
NmeAIII GCCGAG 1 cut(s) 542
NmuCI GTSAC 4 cut(s) 155, 670, 798, 1013
NsiI ATGCAT 1 cut(s) 229
NspI RCATGY 2 cut(s) 310, 544
PaeR7I CTCGAG 1 cut(s) 1199
PciI ACATGT 2 cut(s) 306, 540
PctI GAATGC 2 cut(s) 169, 617
PfeI GAWTC 2 cut(s) 413, 1233
PkrI GCNGC 6 cut(s) 616, 739, 1042, 1190, 1197, 1250
PmaCI CACGTG 1 cut(s) 670
PmlI CACGTG 1 cut(s) 670
Ppu21I YACGTR 2 cut(s) 442, 670
PscI ACATGT 2 cut(s) 306, 540
PsiI TTATAA 1 cut(s) 245
Psp124BI GAGCTC 1 cut(s) 492
Psp6I CCWGG 2 cut(s) 859, 929
PspCI CACGTG 1 cut(s) 670
PspFI CCCAGC 1 cut(s) 27
PspGI CCWGG 2 cut(s) 859, 929
PspN4I GGNNCC 2 cut(s) 112, 843
PspOMI GGGCCC 1 cut(s) 841
PspPI GGNCC 6 cut(s) 25, 841, 842, 927, 944, 1238
PsuI RGATCY 3 cut(s) 59, 110, 1264
PvuII CAGCTG 1 cut(s) 1195
RsaI GTAC 3 cut(s) 444, 465, 557
RsaNI GTAC 3 cut(s) 443, 464, 556
RseI CAYNNNNRTG 2 cut(s) 162, 873
SacI GAGCTC 1 cut(s) 492
SaqAI TTAA 1 cut(s) 1064
SatI GCNGC 6 cut(s) 615, 738, 1041, 1189, 1196, 1249
Sau3AI GATC 9 cut(s) 59, 110, 176, 436, 664, 820, 997, 1216, 1264
Sau96I GGNCC 6 cut(s) 25, 841, 842, 927, 944, 1238
ScrFI CCNGG 2 cut(s) 861, 931
SduI GDGCHC 6 cut(s) 316, 428, 492, 845, 1175, 1286
SfaNI GCATC 2 cut(s) 236, 1138
SfcI CTRYAG 1 cut(s) 1252
Sfr274I CTCGAG 1 cut(s) 1199
SlaI CTCGAG 1 cut(s) 1199
SmiMI CAYNNNNRTG 2 cut(s) 162, 873
SmlI CTYRAG 3 cut(s) 451, 1079, 1199
SmoI CTYRAG 3 cut(s) 451, 1079, 1199
Sse9I AATT 6 cut(s) 19, 749, 756, 778, 828, 1087
SsiI CCGC 3 cut(s) 48, 118, 180
SspMI CTAG 1 cut(s) 627
SstI GAGCTC 1 cut(s) 492
StyD4I CCNGG 2 cut(s) 859, 929
StyI CCWWGG 1 cut(s) 523
TaaI ACNGT 2 cut(s) 173, 662
TaiI ACGT 2 cut(s) 444, 672
TaqI TCGA 3 cut(s) 161, 175, 1200
TasI AATT 6 cut(s) 19, 749, 756, 778, 828, 1087
TatI WGTACW 1 cut(s) 555
TfiI GAWTC 2 cut(s) 413, 1233
Tru1I TTAA 1 cut(s) 1064
Tru9I TTAA 1 cut(s) 1064
TscAI CASTG 4 cut(s) 423, 511, 1102, 1291
TseFI GTSAC 4 cut(s) 155, 670, 798, 1013
TseI GCWGC 6 cut(s) 614, 737, 1040, 1188, 1195, 1248
Tsp45I GTSAC 4 cut(s) 155, 670, 798, 1013
TspDTI ATGAA 4 cut(s) 288, 341, 857, 978
TspRI CASTG 4 cut(s) 423, 511, 1102, 1291
XapI RAATTY 1 cut(s) 828
XbaI TCTAGA 1 cut(s) 626
XceI RCATGY 2 cut(s) 310, 544
XhoI CTCGAG 1 cut(s) 1199
XspI CTAG 1 cut(s) 627
Zsp2I ATGCAT 1 cut(s) 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.