The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01090 |
| fragaria_vesca | FvH4_7g17660 |
| malus_domestica | MD07G1159600.v1.1 |
| prunus_persica | Prupe.2G197700_v2.0.a1 |
| pyrus_communis | pycom01g11280 pycom01g11290 pycom07g15610 |
| rosa_chinensis | RchiOBHm_Chr1g0334521 RchiOBHm_Chr1g0361101 |
| rosa_laevigata | RLG00000027748 RLG00000029447 |
| rosa_multiflora | Rmu_sc0003333.1_g000006 Rmu_sc0034406.1_g000004 Rmu_ssc0000404.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00295430 Rroxscaffold_4G00316780 |
| rosa_rugosa | Rorug01G0285600 |
| rosa_samantha | Rh1AG296900 Rh1BG261200 Rh1CG278500 Rh1DG143600 Rh1DG291200 |
| rosa_wichuraiana | Rw0G002890 Rw1G011520 Rw1G026230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 245 |
| Acc36I | ACCTGC | 1 cut(s) | 475 |
| AciI | CCGC | 3 cut(s) | 48, 118, 180 |
| AclWI | GGATC | 8 cut(s) | 54, 105, 118, 171, 815, 992, 1211, 1259 |
| AcoI | YGGCCR | 3 cut(s) | 364, 709, 1092 |
| AcsI | RAATTY | 1 cut(s) | 828 |
| AcvI | CACGTG | 1 cut(s) | 670 |
| AfaI | GTAC | 3 cut(s) | 444, 465, 557 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 851 |
| AflIII | ACRYGT | 2 cut(s) | 306, 540 |
| AgsI | TTSAA | 5 cut(s) | 534, 549, 730, 892, 1111 |
| AjnI | CCWGG | 2 cut(s) | 859, 929 |
| AluBI | AGCT | 9 cut(s) | 203, 220, 268, 374, 397, 490, 1009, 1195, 1251 |
| AluI | AGCT | 9 cut(s) | 203, 220, 268, 374, 397, 490, 1009, 1195, 1251 |
| Alw21I | GWGCWC | 3 cut(s) | 316, 428, 492 |
| Alw26I | GTCTC | 2 cut(s) | 199, 1041 |
| AlwI | GGATC | 8 cut(s) | 54, 105, 118, 171, 815, 992, 1211, 1259 |
| Ama87I | CYCGRG | 1 cut(s) | 1199 |
| ApaI | GGGCCC | 1 cut(s) | 845 |
| ApeKI | GCWGC | 6 cut(s) | 614, 737, 1040, 1188, 1195, 1248 |
| ApoI | RAATTY | 1 cut(s) | 828 |
| AspS9I | GGNCC | 6 cut(s) | 25, 841, 842, 927, 944, 1238 |
| AsuHPI | GGTGA | 4 cut(s) | 433, 490, 599, 907 |
| AvaI | CYCGRG | 1 cut(s) | 1199 |
| BaeGI | GKGCMC | 2 cut(s) | 845, 1286 |
| BalI | TGGCCA | 3 cut(s) | 366, 711, 1094 |
| BamHI | GGATCC | 1 cut(s) | 110 |
| BanII | GRGCYC | 3 cut(s) | 492, 845, 1175 |
| BauI | CACGAG | 1 cut(s) | 471 |
| BbrPI | CACGTG | 1 cut(s) | 670 |
| BbsI | GAAGAC | 1 cut(s) | 282 |
| Bbv12I | GWGCWC | 3 cut(s) | 316, 428, 492 |
| BbvI | GCAGC | 6 cut(s) | 626, 749, 1027, 1182, 1200, 1260 |
| BccI | CCATC | 5 cut(s) | 686, 869, 874, 1061, 1238 |
| BceAI | ACGGC | 1 cut(s) | 1136 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 322, 356 |
| BciT130I | CCWGG | 2 cut(s) | 861, 931 |
| BciVI | GTATCC | 1 cut(s) | 588 |
| BclI | TGATCA | 2 cut(s) | 436, 664 |
| BcoDI | GTCTC | 2 cut(s) | 199, 1041 |
| BfaI | CTAG | 1 cut(s) | 627 |
| BfmI | CTRYAG | 1 cut(s) | 1252 |
| BfuAI | ACCTGC | 1 cut(s) | 475 |
| BfuI | GTATCC | 1 cut(s) | 588 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1245 |
| BisI | GCNGC | 6 cut(s) | 615, 738, 1041, 1189, 1196, 1249 |
| BlsI | GCNGC | 6 cut(s) | 616, 739, 1042, 1190, 1197, 1250 |
| Bme1390I | CCNGG | 2 cut(s) | 861, 931 |
| BmeT110I | CYCGRG | 1 cut(s) | 1199 |
| BmgT120I | GGNCC | 6 cut(s) | 25, 841, 842, 927, 944, 1238 |
| BmiI | GGNNCC | 2 cut(s) | 112, 843 |
| BmrFI | CCNGG | 2 cut(s) | 861, 931 |
| BmrI | ACTGGG | 2 cut(s) | 147, 393 |
| BmsI | GCATC | 2 cut(s) | 236, 1138 |
| BmuI | ACTGGG | 2 cut(s) | 147, 393 |
| BpiI | GAAGAC | 1 cut(s) | 282 |
| BpuEI | CTTGAG | 2 cut(s) | 472, 1100 |
| BsaAI | YACGTR | 2 cut(s) | 442, 670 |
| BsaI | GGTCTC | 1 cut(s) | 1041 |
| BsaJI | CCNNGG | 2 cut(s) | 517, 523 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 59, 89, 431, 461 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 851 |
| Bse1I | ACTGG | 5 cut(s) | 153, 388, 511, 599, 712 |
| BseBI | CCWGG | 2 cut(s) | 861, 931 |
| BseDI | CCNNGG | 2 cut(s) | 517, 523 |
| BseGI | GGATG | 5 cut(s) | 227, 880, 885, 889, 1153 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 851 |
| BseMII | CTCAG | 3 cut(s) | 329, 1014, 1292 |
| BseNI | ACTGG | 5 cut(s) | 153, 388, 511, 599, 712 |
| BseRI | GAGGAG | 2 cut(s) | 613, 951 |
| BseSI | GKGCMC | 2 cut(s) | 845, 1286 |
| BseXI | GCAGC | 6 cut(s) | 626, 749, 1027, 1182, 1200, 1260 |
| BseYI | CCCAGC | 1 cut(s) | 27 |
| BsgI | GTGCAG | 1 cut(s) | 633 |
| BsiHKAI | GWGCWC | 3 cut(s) | 316, 428, 492 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1199 |
| BslFI | GGGAC | 1 cut(s) | 709 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 851 |
| BsmAI | GTCTC | 2 cut(s) | 199, 1041 |
| BsmFI | GGGAC | 1 cut(s) | 709 |
| BsmI | GAATGC | 2 cut(s) | 169, 617 |
| Bso31I | GGTCTC | 1 cut(s) | 1041 |
| BsoBI | CYCGRG | 1 cut(s) | 1199 |
| Bsp120I | GGGCCC | 1 cut(s) | 841 |
| Bsp1286I | GDGCHC | 6 cut(s) | 316, 428, 492, 845, 1175, 1286 |
| Bsp143I | GATC | 9 cut(s) | 59, 110, 176, 436, 664, 820, 997, 1216, 1264 |
| BspACI | CCGC | 3 cut(s) | 48, 118, 180 |
| BspCNI | CTCAG | 3 cut(s) | 328, 1015, 1291 |
| BspLI | GGNNCC | 2 cut(s) | 112, 843 |
| BspMI | ACCTGC | 1 cut(s) | 475 |
| BspPI | GGATC | 8 cut(s) | 54, 105, 118, 171, 815, 992, 1211, 1259 |
| BspTNI | GGTCTC | 1 cut(s) | 1041 |
| BsrI | ACTGG | 5 cut(s) | 153, 388, 511, 599, 712 |
| BssECI | CCNNGG | 2 cut(s) | 517, 523 |
| BssMI | GATC | 9 cut(s) | 59, 110, 176, 436, 664, 820, 997, 1216, 1264 |
| BssSI | CACGAG | 1 cut(s) | 471 |
| BssT1I | CCWWGG | 1 cut(s) | 523 |
| Bst2BI | CACGAG | 1 cut(s) | 471 |
| Bst2UI | CCWGG | 2 cut(s) | 861, 931 |
| Bst4CI | ACNGT | 2 cut(s) | 173, 662 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 611, 1037 |
| BstBAI | YACGTR | 2 cut(s) | 442, 670 |
| BstC8I | GCNNGC | 1 cut(s) | 1193 |
| BstDEI | CTNAG | 4 cut(s) | 315, 1023, 1269, 1278 |
| BstF5I | GGATG | 5 cut(s) | 227, 880, 885, 889, 1153 |
| BstKTI | GATC | 9 cut(s) | 62, 113, 179, 439, 667, 823, 1000, 1219, 1267 |
| BstMAI | GTCTC | 2 cut(s) | 199, 1041 |
| BstMBI | GATC | 9 cut(s) | 59, 110, 176, 436, 664, 820, 997, 1216, 1264 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 188, 611, 914, 1028, 1037, 1245 |
| BstNI | CCWGG | 2 cut(s) | 861, 931 |
| BstNSI | RCATGY | 2 cut(s) | 310, 544 |
| BstSCI | CCNGG | 2 cut(s) | 859, 929 |
| BstSFI | CTRYAG | 1 cut(s) | 1252 |
| BstSLI | GKGCMC | 2 cut(s) | 845, 1286 |
| BstV1I | GCAGC | 6 cut(s) | 626, 749, 1027, 1182, 1200, 1260 |
| BstV2I | GAAGAC | 1 cut(s) | 282 |
| BstX2I | RGATCY | 3 cut(s) | 59, 110, 1264 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 22, 831 |
| BstYI | RGATCY | 3 cut(s) | 59, 110, 1264 |
| BsuI | GTATCC | 1 cut(s) | 588 |
| BtsCI | GGATG | 5 cut(s) | 227, 880, 885, 889, 1153 |
| BtsI | GCAGTG | 1 cut(s) | 1284 |
| BtsIMutI | CAGTG | 4 cut(s) | 423, 504, 1095, 1284 |
| BveI | ACCTGC | 1 cut(s) | 475 |
| Cac8I | GCNNGC | 1 cut(s) | 1193 |
| Cfr13I | GGNCC | 6 cut(s) | 25, 841, 842, 927, 944, 1238 |
| Csp6I | GTAC | 3 cut(s) | 443, 464, 556 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 936, 971 |
| CviAII | CATG | 7 cut(s) | 224, 280, 307, 541, 733, 869, 1292 |
| CviQI | GTAC | 3 cut(s) | 443, 464, 556 |
| DdeI | CTNAG | 4 cut(s) | 315, 1023, 1269, 1278 |
| DpnI | GATC | 9 cut(s) | 61, 112, 178, 438, 666, 822, 999, 1218, 1266 |
| DpnII | GATC | 9 cut(s) | 59, 110, 176, 436, 664, 820, 997, 1216, 1264 |
| EaeI | YGGCCR | 3 cut(s) | 364, 709, 1092 |
| Ecl136II | GAGCTC | 1 cut(s) | 490 |
| Eco130I | CCWWGG | 1 cut(s) | 523 |
| Eco24I | GRGCYC | 3 cut(s) | 492, 845, 1175 |
| Eco31I | GGTCTC | 1 cut(s) | 1041 |
| Eco53kI | GAGCTC | 1 cut(s) | 490 |
| Eco72I | CACGTG | 1 cut(s) | 670 |
| Eco88I | CYCGRG | 1 cut(s) | 1199 |
| EcoICRI | GAGCTC | 1 cut(s) | 490 |
| EcoO109I | RGGNCCY | 2 cut(s) | 841, 842 |
| EcoRII | CCWGG | 2 cut(s) | 859, 929 |
| EcoT14I | CCWWGG | 1 cut(s) | 523 |
| EcoT22I | ATGCAT | 1 cut(s) | 229 |
| EcoT38I | GRGCYC | 3 cut(s) | 492, 845, 1175 |
| ErhI | CCWWGG | 1 cut(s) | 523 |
| FaeI | CATG | 7 cut(s) | 227, 283, 310, 544, 736, 872, 1295 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 62, 94 |
| FaqI | GGGAC | 1 cut(s) | 709 |
| FatI | CATG | 7 cut(s) | 223, 279, 306, 540, 732, 868, 1291 |
| FauI | CCCGC | 1 cut(s) | 125 |
| FbaI | TGATCA | 2 cut(s) | 436, 664 |
| Fnu4HI | GCNGC | 6 cut(s) | 615, 738, 1041, 1189, 1196, 1249 |
| FokI | GGATG | 5 cut(s) | 214, 887, 892, 896, 1160 |
| FriOI | GRGCYC | 3 cut(s) | 492, 845, 1175 |
| Fsp4HI | GCNGC | 6 cut(s) | 615, 738, 1041, 1189, 1196, 1249 |
| FspBI | CTAG | 1 cut(s) | 627 |
| GluI | GCNGC | 6 cut(s) | 615, 738, 1041, 1189, 1196, 1249 |
| GsaI | CCCAGC | 1 cut(s) | 31 |
| Hin1II | CATG | 7 cut(s) | 227, 283, 310, 544, 736, 872, 1295 |
| HincII | GTYRAC | 1 cut(s) | 381 |
| HindII | GTYRAC | 1 cut(s) | 381 |
| HindIII | AAGCTT | 1 cut(s) | 395 |
| HinfI | GANTC | 2 cut(s) | 413, 1233 |
| HphI | GGTGA | 4 cut(s) | 433, 490, 599, 907 |
| Hpy166II | GTNNAC | 4 cut(s) | 381, 445, 464, 1275 |
| Hpy188I | TCNGA | 7 cut(s) | 110, 128, 199, 318, 689, 820, 980 |
| Hpy188III | TCNNGA | 7 cut(s) | 434, 473, 627, 824, 1001, 1013, 1201 |
| Hpy8I | GTNNAC | 4 cut(s) | 381, 445, 464, 1275 |
| Hpy99I | CGWCG | 1 cut(s) | 177 |
| HpyCH4III | ACNGT | 2 cut(s) | 173, 662 |
| HpyCH4IV | ACGT | 2 cut(s) | 441, 669 |
| HpyCH4V | TGCA | 5 cut(s) | 227, 538, 578, 614, 848 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 188, 611, 914, 1028, 1037, 1245 |
| HpyF3I | CTNAG | 4 cut(s) | 315, 1023, 1269, 1278 |
| HpySE526I | ACGT | 2 cut(s) | 441, 669 |
| Hsp92II | CATG | 7 cut(s) | 227, 283, 310, 544, 736, 872, 1295 |
| Ksp22I | TGATCA | 2 cut(s) | 436, 664 |
| Kzo9I | GATC | 9 cut(s) | 59, 110, 176, 436, 664, 820, 997, 1216, 1264 |
| LmnI | GCTCC | 2 cut(s) | 225, 265 |
| Lsp1109I | GCAGC | 6 cut(s) | 626, 749, 1027, 1182, 1200, 1260 |
| LweI | GCATC | 2 cut(s) | 236, 1138 |
| MaeI | CTAG | 1 cut(s) | 627 |
| MaeII | ACGT | 2 cut(s) | 441, 669 |
| MaeIII | GTNAC | 4 cut(s) | 155, 670, 798, 1013 |
| MalI | GATC | 9 cut(s) | 61, 112, 178, 438, 666, 822, 999, 1218, 1266 |
| MboI | GATC | 9 cut(s) | 59, 110, 176, 436, 664, 820, 997, 1216, 1264 |
| MboII | GAAGA | 6 cut(s) | 226, 287, 422, 847, 1138, 1274 |
| MfeI | CAATTG | 1 cut(s) | 756 |
| MflI | RGATCY | 3 cut(s) | 59, 110, 1264 |
| MhlI | GDGCHC | 6 cut(s) | 316, 428, 492, 845, 1175, 1286 |
| MlsI | TGGCCA | 3 cut(s) | 366, 711, 1094 |
| MluCI | AATT | 6 cut(s) | 19, 749, 756, 778, 828, 1087 |
| MluNI | TGGCCA | 3 cut(s) | 366, 711, 1094 |
| MmeI | TCCRAC | 2 cut(s) | 61, 151 |
| Mox20I | TGGCCA | 3 cut(s) | 366, 711, 1094 |
| Mph1103I | ATGCAT | 1 cut(s) | 229 |
| MscI | TGGCCA | 3 cut(s) | 366, 711, 1094 |
| MseI | TTAA | 1 cut(s) | 1064 |
| MslI | CAYNNNNRTG | 2 cut(s) | 162, 873 |
| Msp20I | TGGCCA | 3 cut(s) | 366, 711, 1094 |
| MspA1I | CMGCKG | 2 cut(s) | 182, 1195 |
| MspR9I | CCNGG | 2 cut(s) | 861, 931 |
| MunI | CAATTG | 1 cut(s) | 756 |
| Mva1269I | GAATGC | 2 cut(s) | 169, 617 |
| MvaI | CCWGG | 2 cut(s) | 861, 931 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 188, 611, 914, 1028, 1037, 1245 |
| NdeII | GATC | 9 cut(s) | 59, 110, 176, 436, 664, 820, 997, 1216, 1264 |
| NlaIII | CATG | 7 cut(s) | 227, 283, 310, 544, 736, 872, 1295 |
| NlaIV | GGNNCC | 2 cut(s) | 112, 843 |
| NmeAIII | GCCGAG | 1 cut(s) | 542 |
| NmuCI | GTSAC | 4 cut(s) | 155, 670, 798, 1013 |
| NsiI | ATGCAT | 1 cut(s) | 229 |
| NspI | RCATGY | 2 cut(s) | 310, 544 |
| PaeR7I | CTCGAG | 1 cut(s) | 1199 |
| PciI | ACATGT | 2 cut(s) | 306, 540 |
| PctI | GAATGC | 2 cut(s) | 169, 617 |
| PfeI | GAWTC | 2 cut(s) | 413, 1233 |
| PkrI | GCNGC | 6 cut(s) | 616, 739, 1042, 1190, 1197, 1250 |
| PmaCI | CACGTG | 1 cut(s) | 670 |
| PmlI | CACGTG | 1 cut(s) | 670 |
| Ppu21I | YACGTR | 2 cut(s) | 442, 670 |
| PscI | ACATGT | 2 cut(s) | 306, 540 |
| PsiI | TTATAA | 1 cut(s) | 245 |
| Psp124BI | GAGCTC | 1 cut(s) | 492 |
| Psp6I | CCWGG | 2 cut(s) | 859, 929 |
| PspCI | CACGTG | 1 cut(s) | 670 |
| PspFI | CCCAGC | 1 cut(s) | 27 |
| PspGI | CCWGG | 2 cut(s) | 859, 929 |
| PspN4I | GGNNCC | 2 cut(s) | 112, 843 |
| PspOMI | GGGCCC | 1 cut(s) | 841 |
| PspPI | GGNCC | 6 cut(s) | 25, 841, 842, 927, 944, 1238 |
| PsuI | RGATCY | 3 cut(s) | 59, 110, 1264 |
| PvuII | CAGCTG | 1 cut(s) | 1195 |
| RsaI | GTAC | 3 cut(s) | 444, 465, 557 |
| RsaNI | GTAC | 3 cut(s) | 443, 464, 556 |
| RseI | CAYNNNNRTG | 2 cut(s) | 162, 873 |
| SacI | GAGCTC | 1 cut(s) | 492 |
| SaqAI | TTAA | 1 cut(s) | 1064 |
| SatI | GCNGC | 6 cut(s) | 615, 738, 1041, 1189, 1196, 1249 |
| Sau3AI | GATC | 9 cut(s) | 59, 110, 176, 436, 664, 820, 997, 1216, 1264 |
| Sau96I | GGNCC | 6 cut(s) | 25, 841, 842, 927, 944, 1238 |
| ScrFI | CCNGG | 2 cut(s) | 861, 931 |
| SduI | GDGCHC | 6 cut(s) | 316, 428, 492, 845, 1175, 1286 |
| SfaNI | GCATC | 2 cut(s) | 236, 1138 |
| SfcI | CTRYAG | 1 cut(s) | 1252 |
| Sfr274I | CTCGAG | 1 cut(s) | 1199 |
| SlaI | CTCGAG | 1 cut(s) | 1199 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 162, 873 |
| SmlI | CTYRAG | 3 cut(s) | 451, 1079, 1199 |
| SmoI | CTYRAG | 3 cut(s) | 451, 1079, 1199 |
| Sse9I | AATT | 6 cut(s) | 19, 749, 756, 778, 828, 1087 |
| SsiI | CCGC | 3 cut(s) | 48, 118, 180 |
| SspMI | CTAG | 1 cut(s) | 627 |
| SstI | GAGCTC | 1 cut(s) | 492 |
| StyD4I | CCNGG | 2 cut(s) | 859, 929 |
| StyI | CCWWGG | 1 cut(s) | 523 |
| TaaI | ACNGT | 2 cut(s) | 173, 662 |
| TaiI | ACGT | 2 cut(s) | 444, 672 |
| TaqI | TCGA | 3 cut(s) | 161, 175, 1200 |
| TasI | AATT | 6 cut(s) | 19, 749, 756, 778, 828, 1087 |
| TatI | WGTACW | 1 cut(s) | 555 |
| TfiI | GAWTC | 2 cut(s) | 413, 1233 |
| Tru1I | TTAA | 1 cut(s) | 1064 |
| Tru9I | TTAA | 1 cut(s) | 1064 |
| TscAI | CASTG | 4 cut(s) | 423, 511, 1102, 1291 |
| TseFI | GTSAC | 4 cut(s) | 155, 670, 798, 1013 |
| TseI | GCWGC | 6 cut(s) | 614, 737, 1040, 1188, 1195, 1248 |
| Tsp45I | GTSAC | 4 cut(s) | 155, 670, 798, 1013 |
| TspDTI | ATGAA | 4 cut(s) | 288, 341, 857, 978 |
| TspRI | CASTG | 4 cut(s) | 423, 511, 1102, 1291 |
| XapI | RAATTY | 1 cut(s) | 828 |
| XbaI | TCTAGA | 1 cut(s) | 626 |
| XceI | RCATGY | 2 cut(s) | 310, 544 |
| XhoI | CTCGAG | 1 cut(s) | 1199 |
| XspI | CTAG | 1 cut(s) | 627 |
| Zsp2I | ATGCAT | 1 cut(s) | 229 |