Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0007091

Physical Location & Seq

Genomic Coordinates Forward (+)

51489169 .. 51492201

Gene Structure 3033 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG291200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1032 bp

ATGTCCTTCTCTGCCGCCACCACCCAGCCCCTCCGGCTCAACACCACCACCGCCGGCGCCGCTGCCAGATCCAATGACAAGGTACCCTCTTCTCTGCTGATGTCAAAGACACCGTCTTTTTTGGGATCCACCCGCAAGCTCCGACCCGGTTGTGTAGCTGCCAAGCCCAATGCGCAGCGCCGATCCGCGGTGGTTTCGGTCTCCGAGGCTGTCAAGGAGAAGAAGGCCAGTGCTTCCACCAATCTGCTGATAACGAGAGAGGAAGGATTGGAGCTTTATGAAGACATGGTATTGGGTAGAGCTTTTGAGGACATGTGTGCTCAGATGTATTACAGAGGCAAAATGTTTGGGTTTGTTCACCTTTACAATGGCCAAGAAGCTGTGTCAACTGGGTTCATCAAGCTTACAAAGCAGGAAGATACTGTGGTGAGCACATACCGTGATCACGTTCACTCTTTGAGTAAGGGTGTCCCTGCTCGTGAAGTCATGAGTGAGCTCTTCGGAAAGGCTACCGGTTGTTGCCGGGGCCAAGGTGGTTCGATGCATATGTTCTCAAAAGCCCACAATTTGATTGGTGGGTTTGCATTTATTGGTGAAGGGATTCCAGTGGCAACAGGGGCAGCCTTCAGCTCTAAATATAGGAGGGAAGTGTTGAAACAGGCAGACTGTGATCACGTGACGTTGGCATTTTTTGGAGATGGGACTGCTAACAATGGCCAGTTCTTTGAATGTTTGAACATGGCTGCATTATGGAAATTACCAATTGTATTTGTTGTGGAAAACAATTTGTGGGCTATTGGAATGTCGCATCTGAGGGCAACTTCTGATCCCGAAATTTGGAAGAAGGGACCTGCATTTGGTATGCCTGGTGTTCATGTGGATGGGATGGATGTTTTGAAGGTGAGGGAAGTGGCAAAGGAGGCAATTGGAAGGGCCAGGAGAGGAGAGGGACCAACCTTGGTGGAATGTGAAACATATAGGTTTAGAGGACACTCATTGGCTGATCCCGATGAGCTCCGTGACCCTGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04922 ko05230 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200 map04066 map04922 map05230

Pfam Domains

Protein Families

E1_dh

Protein Analysis

343

Amino Acids

37.34

Weight (kDa)

8.89

Isoelectric Point (pI)

36.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1_dh	PF00676	95 - 337	2.4e-70	Dehydrogenase E1 component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01090
fragaria_vesca	FvH4_7g17660
malus_domestica	MD07G1159600.v1.1
prunus_persica	Prupe.2G197700_v2.0.a1
pyrus_communis	pycom01g11280 pycom01g11290 pycom07g15610
rosa_chinensis	RchiOBHm_Chr1g0334521 RchiOBHm_Chr1g0361101
rosa_laevigata	RLG00000027748 RLG00000029447
rosa_multiflora	Rmu_sc0003333.1_g000006 Rmu_sc0034406.1_g000004 Rmu_ssc0000404.1_g000009
rosa_roxburghii	Rroxscaffold_4G00295430 Rroxscaffold_4G00316780
rosa_rugosa	Rorug01G0285600
rosa_samantha	Rh1AG296900 Rh1BG261200 Rh1CG278500 Rh1DG143600 Rh1DG291200
rosa_wichuraiana	Rw0G002890 Rw1G011520 Rw1G026230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	174
Acc36I	ACCTGC	1 cut(s)	859
Acc65I	GGTACC	1 cut(s)	82
AccB1I	GGYRCC	2 cut(s)	56, 82
AccII	CGCG	1 cut(s)	188
AciI	CCGC	6 cut(s)	15, 51, 60, 133, 186, 188
AclWI	GGATC	6 cut(s)	63, 120, 133, 177, 821, 998
AcoI	YGGCCR	2 cut(s)	370, 715
AcsI	RAATTY	1 cut(s)	834
AcuI	CTGAAG	1 cut(s)	610
AcvI	CACGTG	1 cut(s)	676
AcyI	GRCGYC	1 cut(s)	57
AfaI	GTAC	1 cut(s)	84
AfiI	CCNNNNNNNGG	3 cut(s)	187, 837, 857
AflIII	ACRYGT	1 cut(s)	312
AgeI	ACCGGT	1 cut(s)	512
AgsI	TTSAA	4 cut(s)	655, 728, 736, 898
AjnI	CCWGG	3 cut(s)	865, 935, 1024
AluBI	AGCT	9 cut(s)	139, 158, 274, 302, 380, 403, 496, 630, 1015
AluI	AGCT	9 cut(s)	139, 158, 274, 302, 380, 403, 496, 630, 1015
Alw21I	GWGCWC	4 cut(s)	322, 434, 498, 1017
Alw26I	GTCTC	1 cut(s)	205
AlwI	GGATC	6 cut(s)	63, 120, 133, 177, 821, 998
AoxI	GGCC	5 cut(s)	225, 370, 526, 715, 933
ApeKI	GCWGC	5 cut(s)	62, 158, 175, 620, 743
ApoI	RAATTY	1 cut(s)	834
ArsI	GACNNNNNNTTYG	2 cut(s)	98, 130
AsiGI	ACCGGT	1 cut(s)	512
Asp700I	GAANNNNTTC	1 cut(s)	600
Asp718I	GGTACC	1 cut(s)	82
AspLEI	GCGC	3 cut(s)	59, 175, 180
AspS9I	GGNCC	4 cut(s)	526, 848, 933, 950
AsuC2I	CCSGG	2 cut(s)	147, 524
AsuHPI	GGTGA	4 cut(s)	350, 439, 605, 913
AvaII	GGWCC	2 cut(s)	848, 950
BaeI	ACNNNNGTAYC	2 cut(s)	411, 444
BalI	TGGCCA	2 cut(s)	372, 717
BamHI	GGATCC	1 cut(s)	125
BanI	GGYRCC	2 cut(s)	56, 82
BanII	GRGCYC	2 cut(s)	498, 1017
BauI	CACGAG	1 cut(s)	477
BbrPI	CACGTG	1 cut(s)	676
BbsI	GAAGAC	1 cut(s)	288
Bbv12I	GWGCWC	4 cut(s)	322, 434, 498, 1017
BbvI	GCAGC	5 cut(s)	49, 145, 187, 632, 730
BccI	CCATC	3 cut(s)	692, 875, 880
BciT130I	CCWGG	3 cut(s)	867, 937, 1026
BclI	TGATCA	2 cut(s)	442, 670
BcnI	CCSGG	2 cut(s)	147, 524
BcoDI	GTCTC	1 cut(s)	205
BfoI	RGCGCY	2 cut(s)	60, 181
BfuAI	ACCTGC	1 cut(s)	859
BglI	GCCNNNNNGGC	1 cut(s)	34
BisI	GCNGC	7 cut(s)	15, 60, 63, 159, 176, 621, 744
BlsI	GCNGC	7 cut(s)	16, 61, 64, 160, 177, 622, 745
Bme1390I	CCNGG	5 cut(s)	147, 524, 867, 937, 1026
Bme18I	GGWCC	2 cut(s)	848, 950
BmgT120I	GGNCC	4 cut(s)	526, 848, 933, 950
BmiI	GGNNCC	6 cut(s)	58, 84, 127, 527, 849, 951
BmrFI	CCNGG	5 cut(s)	147, 524, 867, 937, 1026
BmrI	ACTGGG	1 cut(s)	399
BmsI	GCATC	2 cut(s)	531, 817
BmuI	ACTGGG	1 cut(s)	399
BpiI	GAAGAC	1 cut(s)	288
BpuMI	CCSGG	2 cut(s)	147, 524
BsaAI	YACGTR	1 cut(s)	676
BsaHI	GRCGYC	1 cut(s)	57
BsaI	GGTCTC	1 cut(s)	205
BsaJI	CCNNGG	6 cut(s)	186, 204, 523, 529, 957, 1024
BsaWI	WCCGGW	1 cut(s)	512
Bsc4I	CCNNNNNNNGG	3 cut(s)	187, 837, 857
Bse118I	RCCGGY	2 cut(s)	53, 512
Bse1I	ACTGG	4 cut(s)	228, 394, 605, 718
BseBI	CCWGG	3 cut(s)	867, 937, 1026
BseDI	CCNNGG	6 cut(s)	186, 204, 523, 529, 957, 1024
BseGI	GGATG	3 cut(s)	886, 891, 895
BseLI	CCNNNNNNNGG	3 cut(s)	187, 837, 857
BseMII	CTCAG	2 cut(s)	335, 803
BseNI	ACTGG	4 cut(s)	228, 394, 605, 718
BseRI	GAGGAG	1 cut(s)	957
BseXI	GCAGC	5 cut(s)	49, 145, 187, 632, 730
BseYI	CCCAGC	1 cut(s)	24
Bsh1236I	CGCG	1 cut(s)	188
BshFI	GGCC	5 cut(s)	227, 372, 528, 717, 935
BshNI	GGYRCC	2 cut(s)	56, 82
BshTI	ACCGGT	1 cut(s)	512
BsiHKAI	GWGCWC	4 cut(s)	322, 434, 498, 1017
BsiSI	CCGG	5 cut(s)	34, 54, 147, 513, 523
BslFI	GGGAC	4 cut(s)	455, 715, 861, 963
BslI	CCNNNNNNNGG	3 cut(s)	187, 837, 857
BsmAI	GTCTC	1 cut(s)	205
BsmFI	GGGAC	4 cut(s)	455, 715, 861, 963
BsnI	GGCC	5 cut(s)	227, 372, 528, 717, 935
Bso31I	GGTCTC	1 cut(s)	205
Bsp1286I	GDGCHC	4 cut(s)	322, 434, 498, 1017
Bsp143I	GATC	7 cut(s)	68, 125, 182, 442, 670, 826, 1003
BspACI	CCGC	6 cut(s)	15, 51, 60, 133, 186, 188
BspANI	GGCC	5 cut(s)	227, 372, 528, 717, 935
BspCNI	CTCAG	2 cut(s)	334, 804
BspFNI	CGCG	1 cut(s)	188
BspHI	TCATGA	1 cut(s)	486
BspLI	GGNNCC	6 cut(s)	58, 84, 127, 527, 849, 951
BspMI	ACCTGC	1 cut(s)	859
BspPI	GGATC	6 cut(s)	63, 120, 133, 177, 821, 998
BspQI	GCTCTTC	1 cut(s)	503
BspT107I	GGYRCC	2 cut(s)	56, 82
BspTNI	GGTCTC	1 cut(s)	205
BsrFI	RCCGGY	2 cut(s)	53, 512
BsrI	ACTGG	4 cut(s)	228, 394, 605, 718
BssAI	RCCGGY	2 cut(s)	53, 512
BssECI	CCNNGG	6 cut(s)	186, 204, 523, 529, 957, 1024
BssMI	GATC	7 cut(s)	68, 125, 182, 442, 670, 826, 1003
BssNI	GRCGYC	1 cut(s)	57
BssSI	CACGAG	1 cut(s)	477
BssT1I	CCWWGG	2 cut(s)	529, 957
Bst2BI	CACGAG	1 cut(s)	477
Bst2UI	CCWGG	3 cut(s)	867, 937, 1026
Bst4CI	ACNGT	4 cut(s)	114, 424, 440, 668
Bst6I	CTCTTC	2 cut(s)	94, 503
BstACI	GRCGYC	1 cut(s)	57
BstBAI	YACGTR	1 cut(s)	676
BstC8I	GCNNGC	2 cut(s)	55, 137
BstDEI	CTNAG	2 cut(s)	321, 812
BstDSI	CCRYGG	1 cut(s)	186
BstF5I	GGATG	3 cut(s)	886, 891, 895
BstFNI	CGCG	1 cut(s)	188
BstH2I	RGCGCY	2 cut(s)	60, 181
BstHHI	GCGC	3 cut(s)	59, 175, 180
BstKTI	GATC	7 cut(s)	71, 128, 185, 445, 673, 829, 1006
BstMAI	GTCTC	1 cut(s)	205
BstMBI	GATC	7 cut(s)	68, 125, 182, 442, 670, 826, 1003
BstMWI	GCNNNNNNNGC	6 cut(s)	34, 59, 172, 409, 617, 920
BstNI	CCWGG	3 cut(s)	867, 937, 1026
BstNSI	RCATGY	1 cut(s)	316
BstSCI	CCNGG	5 cut(s)	145, 522, 865, 935, 1024
BstUI	CGCG	1 cut(s)	188
BstV1I	GCAGC	5 cut(s)	49, 145, 187, 632, 730
BstV2I	GAAGAC	1 cut(s)	288
BstX2I	RGATCY	2 cut(s)	68, 125
BstYI	RGATCY	2 cut(s)	68, 125
BsuRI	GGCC	5 cut(s)	227, 372, 528, 717, 935
BtgI	CCRYGG	1 cut(s)	186
BtsCI	GGATG	3 cut(s)	886, 891, 895
BtsIMutI	CAGTG	2 cut(s)	235, 612
BveI	ACCTGC	1 cut(s)	859
Cac8I	GCNNGC	2 cut(s)	55, 137
CciI	TCATGA	1 cut(s)	486
CfoI	GCGC	3 cut(s)	59, 175, 180
Cfr10I	RCCGGY	2 cut(s)	53, 512
Cfr13I	GGNCC	4 cut(s)	526, 848, 933, 950
Cfr42I	CCGCGG	1 cut(s)	189
Csp6I	GTAC	1 cut(s)	83
CspAI	ACCGGT	1 cut(s)	512
CspCI	CAANNNNNGTGG	2 cut(s)	942, 977
CviAII	CATG	5 cut(s)	286, 313, 487, 739, 875
CviQI	GTAC	1 cut(s)	83
DdeI	CTNAG	2 cut(s)	321, 812
DinI	GGCGCC	1 cut(s)	58
DpnI	GATC	7 cut(s)	70, 127, 184, 444, 672, 828, 1005
DpnII	GATC	7 cut(s)	68, 125, 182, 442, 670, 826, 1003
EaeI	YGGCCR	2 cut(s)	370, 715
Eam1104I	CTCTTC	2 cut(s)	94, 503
EarI	CTCTTC	2 cut(s)	94, 503
Ecl136II	GAGCTC	2 cut(s)	496, 1015
Eco130I	CCWWGG	2 cut(s)	529, 957
Eco24I	GRGCYC	2 cut(s)	498, 1017
Eco31I	GGTCTC	1 cut(s)	205
Eco47I	GGWCC	2 cut(s)	848, 950
Eco53kI	GAGCTC	2 cut(s)	496, 1015
Eco57I	CTGAAG	1 cut(s)	610
Eco72I	CACGTG	1 cut(s)	676
EcoICRI	GAGCTC	2 cut(s)	496, 1015
EcoO109I	RGGNCCY	1 cut(s)	848
EcoRII	CCWGG	3 cut(s)	865, 935, 1024
EcoT14I	CCWWGG	2 cut(s)	529, 957
EcoT22I	ATGCAT	1 cut(s)	546
EcoT38I	GRGCYC	2 cut(s)	498, 1017
EgeI	GGCGCC	1 cut(s)	58
EheI	GGCGCC	1 cut(s)	58
ErhI	CCWWGG	2 cut(s)	529, 957
FaeI	CATG	5 cut(s)	289, 316, 490, 742, 878
FaqI	GGGAC	4 cut(s)	455, 715, 861, 963
FatI	CATG	5 cut(s)	285, 312, 486, 738, 874
FauI	CCCGC	1 cut(s)	140
FauNDI	CATATG	1 cut(s)	546
FbaI	TGATCA	2 cut(s)	442, 670
Fnu4HI	GCNGC	7 cut(s)	15, 60, 63, 159, 176, 621, 744
FokI	GGATG	3 cut(s)	893, 898, 902
FriOI	GRGCYC	2 cut(s)	498, 1017
Fsp4HI	GCNGC	7 cut(s)	15, 60, 63, 159, 176, 621, 744
FspI	TGCGCA	1 cut(s)	174
GlaI	GCGC	3 cut(s)	58, 174, 179
GluI	GCNGC	7 cut(s)	15, 60, 63, 159, 176, 621, 744
GsaI	CCCAGC	1 cut(s)	28
HaeII	RGCGCY	2 cut(s)	60, 181
HaeIII	GGCC	5 cut(s)	227, 372, 528, 717, 935
HapII	CCGG	5 cut(s)	34, 54, 147, 513, 523
HhaI	GCGC	3 cut(s)	59, 175, 180
Hin1I	GRCGYC	1 cut(s)	57
Hin1II	CATG	5 cut(s)	289, 316, 490, 742, 878
Hin6I	GCGC	3 cut(s)	57, 173, 178
HinP1I	GCGC	3 cut(s)	57, 173, 178
HincII	GTYRAC	1 cut(s)	387
HindII	GTYRAC	1 cut(s)	387
HindIII	AAGCTT	1 cut(s)	401
HinfI	GANTC	1 cut(s)	601
HpaII	CCGG	5 cut(s)	34, 54, 147, 513, 523
HphI	GGTGA	4 cut(s)	350, 439, 605, 913
Hpy166II	GTNNAC	3 cut(s)	358, 387, 451
Hpy188I	TCNGA	6 cut(s)	143, 205, 324, 503, 813, 826
Hpy188III	TCNNGA	4 cut(s)	479, 487, 830, 1007
Hpy8I	GTNNAC	3 cut(s)	358, 387, 451
HpyAV	CCTTC	8 cut(s)	16, 217, 257, 590, 634, 838, 892, 924
HpyCH4III	ACNGT	4 cut(s)	114, 424, 440, 668
HpyCH4IV	ACGT	3 cut(s)	447, 675, 680
HpyCH4V	TGCA	4 cut(s)	544, 584, 746, 854
HpyF10VI	GCNNNNNNNGC	6 cut(s)	34, 59, 172, 409, 617, 920
HpyF3I	CTNAG	2 cut(s)	321, 812
HpySE526I	ACGT	3 cut(s)	447, 675, 680
Hsp92I	GRCGYC	1 cut(s)	57
Hsp92II	CATG	5 cut(s)	289, 316, 490, 742, 878
HspAI	GCGC	3 cut(s)	57, 173, 178
KasI	GGCGCC	1 cut(s)	56
KpnI	GGTACC	1 cut(s)	86
KroI	GCCGGC	1 cut(s)	53
KroNI	GCCGGC	1 cut(s)	55
Ksp22I	TGATCA	2 cut(s)	442, 670
KspI	CCGCGG	1 cut(s)	189
Kzo9I	GATC	7 cut(s)	68, 125, 182, 442, 670, 826, 1003
LguI	GCTCTTC	1 cut(s)	503
LmnI	GCTCC	3 cut(s)	144, 271, 1020
Lsp1109I	GCAGC	5 cut(s)	49, 145, 187, 632, 730
LweI	GCATC	2 cut(s)	531, 817
MaeII	ACGT	3 cut(s)	447, 675, 680
MaeIII	GTNAC	2 cut(s)	676, 1019
MalI	GATC	7 cut(s)	70, 127, 184, 444, 672, 828, 1005
MboI	GATC	7 cut(s)	68, 125, 182, 442, 670, 826, 1003
MboII	GAAGA	6 cut(s)	81, 232, 293, 428, 490, 853
MfeI	CAATTG	2 cut(s)	762, 924
MflI	RGATCY	2 cut(s)	68, 125
MhlI	GDGCHC	4 cut(s)	322, 434, 498, 1017
MlsI	TGGCCA	2 cut(s)	372, 717
MluCI	AATT	6 cut(s)	565, 755, 762, 784, 834, 924
MluNI	TGGCCA	2 cut(s)	372, 717
Mly113I	GGCGCC	1 cut(s)	57
MmeI	TCCRAC	1 cut(s)	166
Mox20I	TGGCCA	2 cut(s)	372, 717
Mph1103I	ATGCAT	1 cut(s)	546
MreI	CGCCGGCG	1 cut(s)	53
MroNI	GCCGGC	1 cut(s)	53
MroXI	GAANNNNTTC	1 cut(s)	600
MscI	TGGCCA	2 cut(s)	372, 717
MslI	CAYNNNNRTG	1 cut(s)	879
Msp20I	TGGCCA	2 cut(s)	372, 717
MspA1I	CMGCKG	2 cut(s)	62, 188
MspI	CCGG	5 cut(s)	34, 54, 147, 513, 523
MspR9I	CCNGG	5 cut(s)	147, 524, 867, 937, 1026
MteI	GCGCNGCGC	1 cut(s)	176
MunI	CAATTG	2 cut(s)	762, 924
MvaI	CCWGG	3 cut(s)	867, 937, 1026
MvnI	CGCG	1 cut(s)	188
MwoI	GCNNNNNNNGC	6 cut(s)	34, 59, 172, 409, 617, 920
NaeI	GCCGGC	1 cut(s)	55
NarI	GGCGCC	1 cut(s)	57
NciI	CCSGG	2 cut(s)	147, 524
NdeI	CATATG	1 cut(s)	546
NdeII	GATC	7 cut(s)	68, 125, 182, 442, 670, 826, 1003
NgoMIV	GCCGGC	1 cut(s)	53
NlaIII	CATG	5 cut(s)	289, 316, 490, 742, 878
NlaIV	GGNNCC	6 cut(s)	58, 84, 127, 527, 849, 951
NmuCI	GTSAC	2 cut(s)	676, 1019
NsbI	TGCGCA	1 cut(s)	174
NsiI	ATGCAT	1 cut(s)	546
NspI	RCATGY	1 cut(s)	316
PagI	TCATGA	1 cut(s)	486
PciI	ACATGT	1 cut(s)	312
PciSI	GCTCTTC	1 cut(s)	503
PdiI	GCCGGC	1 cut(s)	55
PdmI	GAANNNNTTC	1 cut(s)	600
PfeI	GAWTC	1 cut(s)	601
PflFI	GACNNNGTC	1 cut(s)	112
PinAI	ACCGGT	1 cut(s)	512
PkrI	GCNGC	7 cut(s)	16, 61, 64, 160, 177, 622, 745
PluTI	GGCGCC	1 cut(s)	60
PmaCI	CACGTG	1 cut(s)	676
PmlI	CACGTG	1 cut(s)	676
Ppu21I	YACGTR	1 cut(s)	676
PpuMI	RGGWCCY	1 cut(s)	848
PscI	ACATGT	1 cut(s)	312
Psp124BI	GAGCTC	2 cut(s)	498, 1017
Psp5II	RGGWCCY	1 cut(s)	848
Psp6I	CCWGG	3 cut(s)	865, 935, 1024
PspCI	CACGTG	1 cut(s)	676
PspFI	CCCAGC	1 cut(s)	24
PspGI	CCWGG	3 cut(s)	865, 935, 1024
PspN4I	GGNNCC	6 cut(s)	58, 84, 127, 527, 849, 951
PspPI	GGNCC	4 cut(s)	526, 848, 933, 950
PspPPI	RGGWCCY	1 cut(s)	848
PsuI	RGATCY	2 cut(s)	68, 125
PsyI	GACNNNGTC	1 cut(s)	112
RsaI	GTAC	1 cut(s)	84
RsaNI	GTAC	1 cut(s)	83
RseI	CAYNNNNRTG	1 cut(s)	879
SacI	GAGCTC	2 cut(s)	498, 1017
SacII	CCGCGG	1 cut(s)	189
SapI	GCTCTTC	1 cut(s)	503
SatI	GCNGC	7 cut(s)	15, 60, 63, 159, 176, 621, 744
Sau3AI	GATC	7 cut(s)	68, 125, 182, 442, 670, 826, 1003
Sau96I	GGNCC	4 cut(s)	526, 848, 933, 950
ScrFI	CCNGG	5 cut(s)	147, 524, 867, 937, 1026
SduI	GDGCHC	4 cut(s)	322, 434, 498, 1017
SfaNI	GCATC	2 cut(s)	531, 817
SfoI	GGCGCC	1 cut(s)	58
Sfr303I	CCGCGG	1 cut(s)	189
SgrAI	CRCCGGYG	1 cut(s)	53
SgrBI	CCGCGG	1 cut(s)	189
SinI	GGWCC	2 cut(s)	848, 950
SmiMI	CAYNNNNRTG	1 cut(s)	879
Sse9I	AATT	6 cut(s)	565, 755, 762, 784, 834, 924
SsiI	CCGC	6 cut(s)	15, 51, 60, 133, 186, 188
SspDI	GGCGCC	1 cut(s)	56
SstI	GAGCTC	2 cut(s)	498, 1017
StyD4I	CCNGG	5 cut(s)	145, 522, 865, 935, 1024
StyI	CCWWGG	2 cut(s)	529, 957
TaaI	ACNGT	4 cut(s)	114, 424, 440, 668
TaiI	ACGT	3 cut(s)	450, 678, 683
TaqI	TCGA	1 cut(s)	539
TaqII	GACCGA	1 cut(s)	187
TasI	AATT	6 cut(s)	565, 755, 762, 784, 834, 924
TauI	GCSGC	2 cut(s)	17, 62
TfiI	GAWTC	1 cut(s)	601
TscAI	CASTG	2 cut(s)	235, 612
TseFI	GTSAC	2 cut(s)	676, 1019
TseI	GCWGC	5 cut(s)	62, 158, 175, 620, 743
Tsp45I	GTSAC	2 cut(s)	676, 1019
TspDTI	ATGAA	3 cut(s)	294, 385, 863
TspGWI	ACGGA	1 cut(s)	1007
TspRI	CASTG	2 cut(s)	235, 612
Tth111I	GACNNNGTC	1 cut(s)	112
VpaK11BI	GGWCC	2 cut(s)	848, 950
XapI	RAATTY	1 cut(s)	834
XceI	RCATGY	1 cut(s)	316
XcmI	CCANNNNNNNNNTGG	1 cut(s)	569
XmnI	GAANNNNTTC	1 cut(s)	600
Zsp2I	ATGCAT	1 cut(s)	546

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.