Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007091

Physical Location & Seq

Genomic Coordinates Forward (+)

53079131 .. 53082237

Gene Structure 3107 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58601

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1302 bp

ATGTCCTTCTCTGCCGCCACCACCCAGCCCCTCCGGCTCAACACCACCGCCGGCGCCGCTGCCAGATCCAATGACAAGGTACCCTCTTCTCTGCTGATGTCAAAGACTCCGTCTTTTTTGGGATCCACCCGCAAGCTCCGACCCGGTTGTGTAGCTGCCAAGCCCAATGCGCAGCGCCGATCCGCGGTGGTTTCGGTCTCCGAGGCTGTCAAGGAGAAGAAGGCCAGTGCTTCCACCAATCTGCTGATAACGAGAGAGGAAGGATTGGAGCTTTATGAAGACATGGTATTGGGTAGAGCTTTTGAGGACATGTGTGCTCAGATGTATTACAGAGGCAAAATGTTTGGGTTTGTTCACCTTTACAATGGCCAAGAAGCTGTGTCAACTGGGTTCATCAAGCTTACAAAGCAGGAAGATACTGTGGTGAGCACATACCGTGATCACGTTCACTCTTTGAGTAAGGGTGTCCCTGCTCGTGAAGTCATGAGTGAGCTCTTCGGAAAGGCTACCGGTTGTTGCCGGGGCCAAGGTGGTTCGATGCATATGTTCTCAAAAGCCCACAATTTGATTGGTGGGTTTGCATTTATTGGTGAAGGGATTCCAGTGGCAACAGGGGCAGCCTTCAGCTCTAAATATAGGAGGGAAGTGTTGAAACAGGCAGACTGTGATCACGTGACATTGGCATTTTTTGGAGATGGGACTGCTAACAATGGCCAGTTCTTTGAATGTTTGAACATGGCTGCATTATGGAAACTTCCAATTGTATTTGTTGTGGAAAACAATTTGTGGGCTATTGGAATGTCGCATCTGAGGGCAACTTCTGATCCCGAAATTTGGAAGAAGGGACCTGCATTTGGTATGCCCGGTGTTCATGTGGACGGGATGGATGTTTTGAAGGTGAGGGAAGTGGCAAAGGAAGCAATTGGGAGGGCCAGGAGAGGAGAAGGACCAACCTTGGTGGAATGTGAAACATATAGGTTTAGAGGACACTCACTGGCTGATCCTGATGAGCTCCGTGACCCTGCTGAGAAGGCACACTATGCTGCCAGAGACCCCATCACAGCCTTGAAGAAATACATATTTGAGCACAACTTAGCCAGTGAACAAGAGCTGAAGGCCATAGATAAGAAGATAGATGAGGTGCTTGAGGATGCTGTTGAGTTTGCCGACGAAAGCCCGCTCCCACCTCGCAGCCAGCTGCTCGAGAATGTGTTTGCCGATCCTAAAGGCTTTGGAATAGGGCCTGATGGCCGCTACAGATGTGAGGACCCTAAATTTACTCAGGGCACTGCCAAAGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04922 ko05230 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200 map04066 map04922 map05230

Pfam Domains

Protein Families

E1_dh

Protein Analysis

433

Amino Acids

47.45

Weight (kDa)

7.61

Isoelectric Point (pI)

36.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1_dh	PF00676	94 - 395	9.7e-83	Dehydrogenase E1 component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01090
fragaria_vesca	FvH4_7g17660
malus_domestica	MD07G1159600.v1.1
prunus_persica	Prupe.2G197700_v2.0.a1
pyrus_communis	pycom01g11280 pycom01g11290 pycom07g15610
rosa_chinensis	RchiOBHm_Chr1g0334521 RchiOBHm_Chr1g0361101
rosa_laevigata	RLG00000027748 RLG00000029447
rosa_multiflora	Rmu_sc0003333.1_g000006 Rmu_sc0034406.1_g000004 Rmu_ssc0000404.1_g000009
rosa_roxburghii	Rroxscaffold_4G00295430 Rroxscaffold_4G00316780
rosa_rugosa	Rorug01G0285600
rosa_samantha	Rh1AG296900 Rh1BG261200 Rh1CG278500 Rh1DG143600 Rh1DG291200
rosa_wichuraiana	Rw0G002890 Rw1G011520 Rw1G026230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	171
Acc36I	ACCTGC	1 cut(s)	856
Acc65I	GGTACC	1 cut(s)	79
AccB1I	GGYRCC	2 cut(s)	53, 79
AccBSI	CCGCTC	1 cut(s)	1180
AccII	CGCG	1 cut(s)	185
AciI	CCGC	8 cut(s)	15, 48, 57, 130, 183, 185, 1178, 1252
AclWI	GGATC	7 cut(s)	60, 117, 130, 174, 818, 995, 1214
AcoI	YGGCCR	3 cut(s)	367, 712, 1249
AcsI	RAATTY	2 cut(s)	831, 1274
AcuI	CTGAAG	2 cut(s)	607, 1133
AcvI	CACGTG	1 cut(s)	673
AcyI	GRCGYC	1 cut(s)	54
AfaI	GTAC	1 cut(s)	81
AfiI	CCNNNNNNNGG	3 cut(s)	184, 834, 854
AflIII	ACRYGT	1 cut(s)	309
AgeI	ACCGGT	1 cut(s)	509
AgsI	TTSAA	5 cut(s)	652, 725, 733, 895, 1069
AjnI	CCWGG	1 cut(s)	932
Alw21I	GWGCWC	5 cut(s)	319, 431, 495, 1014, 1089
Alw26I	GTCTC	2 cut(s)	202, 1044
AlwI	GGATC	7 cut(s)	60, 117, 130, 174, 818, 995, 1214
Ama87I	CYCGRG	1 cut(s)	1202
AoxI	GGCC	8 cut(s)	222, 367, 523, 712, 930, 1116, 1241, 1249
ApeKI	GCWGC	8 cut(s)	59, 155, 172, 617, 740, 1043, 1191, 1198
ApoI	RAATTY	2 cut(s)	831, 1274
ArsI	GACNNNNNNTTYG	2 cut(s)	95, 127
AsiGI	ACCGGT	1 cut(s)	509
Asp700I	GAANNNNTTC	1 cut(s)	597
Asp718I	GGTACC	1 cut(s)	79
AspLEI	GCGC	3 cut(s)	56, 172, 177
AspS9I	GGNCC	6 cut(s)	523, 845, 930, 947, 1241, 1267
AsuC2I	CCSGG	3 cut(s)	144, 521, 864
AsuHPI	GGTGA	4 cut(s)	347, 436, 602, 910
AvaI	CYCGRG	1 cut(s)	1202
AvaII	GGWCC	3 cut(s)	845, 947, 1267
BaeGI	GKGCMC	1 cut(s)	1289
BaeI	ACNNNNGTAYC	2 cut(s)	408, 441
BalI	TGGCCA	2 cut(s)	369, 714
BamHI	GGATCC	1 cut(s)	122
BanI	GGYRCC	2 cut(s)	53, 79
BanII	GRGCYC	2 cut(s)	495, 1014
BauI	CACGAG	1 cut(s)	474
BbrPI	CACGTG	1 cut(s)	673
BbsI	GAAGAC	1 cut(s)	285
Bbv12I	GWGCWC	5 cut(s)	319, 431, 495, 1014, 1089
BbvI	GCAGC	8 cut(s)	46, 142, 184, 629, 727, 1030, 1185, 1203
BccI	CCATC	4 cut(s)	689, 877, 1064, 1241
BciT130I	CCWGG	1 cut(s)	934
BclI	TGATCA	2 cut(s)	439, 667
BcnI	CCSGG	3 cut(s)	144, 521, 864
BcoDI	GTCTC	2 cut(s)	202, 1044
BfmI	CTRYAG	1 cut(s)	1255
BfoI	RGCGCY	2 cut(s)	57, 178
BfuAI	ACCTGC	1 cut(s)	856
BglI	GCCNNNNNGGC	1 cut(s)	34
Bme1390I	CCNGG	4 cut(s)	144, 521, 864, 934
Bme18I	GGWCC	3 cut(s)	845, 947, 1267
BmeT110I	CYCGRG	1 cut(s)	1202
BmgT120I	GGNCC	6 cut(s)	523, 845, 930, 947, 1241, 1267
BmiI	GGNNCC	6 cut(s)	55, 81, 124, 524, 846, 1269
BmrFI	CCNGG	4 cut(s)	144, 521, 864, 934
BmrI	ACTGGG	1 cut(s)	396
BmsI	GCATC	3 cut(s)	528, 814, 1141
BmuI	ACTGGG	1 cut(s)	396
BpiI	GAAGAC	1 cut(s)	285
BpuEI	CTTGAG	1 cut(s)	1166
BpuMI	CCSGG	3 cut(s)	144, 521, 864
BsaAI	YACGTR	1 cut(s)	673
BsaHI	GRCGYC	1 cut(s)	54
BsaI	GGTCTC	2 cut(s)	202, 1044
BsaJI	CCNNGG	5 cut(s)	183, 201, 520, 526, 954
BsaWI	WCCGGW	1 cut(s)	509
Bsc4I	CCNNNNNNNGG	3 cut(s)	184, 834, 854
Bse118I	RCCGGY	2 cut(s)	50, 509
Bse1I	ACTGG	6 cut(s)	225, 391, 602, 715, 999, 1098
BseBI	CCWGG	1 cut(s)	934
BseDI	CCNNGG	5 cut(s)	183, 201, 520, 526, 954
BseGI	GGATG	3 cut(s)	888, 892, 1156
BseLI	CCNNNNNNNGG	3 cut(s)	184, 834, 854
BseMII	CTCAG	4 cut(s)	332, 800, 1017, 1295
BseNI	ACTGG	6 cut(s)	225, 391, 602, 715, 999, 1098
BseRI	GAGGAG	1 cut(s)	954
BseSI	GKGCMC	1 cut(s)	1289
BseXI	GCAGC	8 cut(s)	46, 142, 184, 629, 727, 1030, 1185, 1203
BseYI	CCCAGC	1 cut(s)	24
Bsh1236I	CGCG	1 cut(s)	185
BshFI	GGCC	8 cut(s)	224, 369, 525, 714, 932, 1118, 1243, 1251
BshNI	GGYRCC	2 cut(s)	53, 79
BshTI	ACCGGT	1 cut(s)	509
BsiHKAI	GWGCWC	5 cut(s)	319, 431, 495, 1014, 1089
BsiHKCI	CYCGRG	1 cut(s)	1202
BsiSI	CCGG	6 cut(s)	34, 51, 144, 510, 520, 864
BslFI	GGGAC	3 cut(s)	452, 712, 858
BslI	CCNNNNNNNGG	3 cut(s)	184, 834, 854
BsmAI	GTCTC	2 cut(s)	202, 1044
BsmFI	GGGAC	3 cut(s)	452, 712, 858
BsnI	GGCC	8 cut(s)	224, 369, 525, 714, 932, 1118, 1243, 1251
Bso31I	GGTCTC	2 cut(s)	202, 1044
BsoBI	CYCGRG	1 cut(s)	1202
Bsp1286I	GDGCHC	6 cut(s)	319, 431, 495, 1014, 1089, 1289
Bsp143I	GATC	8 cut(s)	65, 122, 179, 439, 667, 823, 1000, 1219
BspACI	CCGC	8 cut(s)	15, 48, 57, 130, 183, 185, 1178, 1252
BspANI	GGCC	8 cut(s)	224, 369, 525, 714, 932, 1118, 1243, 1251
BspCNI	CTCAG	4 cut(s)	331, 801, 1018, 1294
BspFNI	CGCG	1 cut(s)	185
BspHI	TCATGA	1 cut(s)	483
BspLI	GGNNCC	6 cut(s)	55, 81, 124, 524, 846, 1269
BspMI	ACCTGC	1 cut(s)	856
BspPI	GGATC	7 cut(s)	60, 117, 130, 174, 818, 995, 1214
BspQI	GCTCTTC	1 cut(s)	500
BspT107I	GGYRCC	2 cut(s)	53, 79
BspTNI	GGTCTC	2 cut(s)	202, 1044
BsrBI	CCGCTC	1 cut(s)	1180
BsrFI	RCCGGY	2 cut(s)	50, 509
BsrI	ACTGG	6 cut(s)	225, 391, 602, 715, 999, 1098
BssAI	RCCGGY	2 cut(s)	50, 509
BssECI	CCNNGG	5 cut(s)	183, 201, 520, 526, 954
BssMI	GATC	8 cut(s)	65, 122, 179, 439, 667, 823, 1000, 1219
BssNI	GRCGYC	1 cut(s)	54
BssSI	CACGAG	1 cut(s)	474
BssT1I	CCWWGG	2 cut(s)	526, 954
Bst2BI	CACGAG	1 cut(s)	474
Bst2UI	CCWGG	1 cut(s)	934
Bst4CI	ACNGT	3 cut(s)	421, 437, 665
Bst6I	CTCTTC	2 cut(s)	91, 500
BstACI	GRCGYC	1 cut(s)	54
BstAPI	GCANNNNNTGC	1 cut(s)	1040
BstBAI	YACGTR	1 cut(s)	673
BstC8I	GCNNGC	4 cut(s)	52, 134, 1178, 1196
BstDEI	CTNAG	5 cut(s)	318, 809, 1026, 1093, 1281
BstDSI	CCRYGG	1 cut(s)	183
BstF5I	GGATG	3 cut(s)	888, 892, 1156
BstFNI	CGCG	1 cut(s)	185
BstH2I	RGCGCY	2 cut(s)	57, 178
BstHHI	GCGC	3 cut(s)	56, 172, 177
BstKTI	GATC	8 cut(s)	68, 125, 182, 442, 670, 826, 1003, 1222
BstMAI	GTCTC	2 cut(s)	202, 1044
BstMBI	GATC	8 cut(s)	65, 122, 179, 439, 667, 823, 1000, 1219
BstMWI	GCNNNNNNNGC	8 cut(s)	34, 56, 169, 406, 614, 917, 1031, 1040
BstNI	CCWGG	1 cut(s)	934
BstNSI	RCATGY	1 cut(s)	313
BstSCI	CCNGG	4 cut(s)	142, 519, 862, 932
BstSFI	CTRYAG	1 cut(s)	1255
BstSLI	GKGCMC	1 cut(s)	1289
BstUI	CGCG	1 cut(s)	185
BstV1I	GCAGC	8 cut(s)	46, 142, 184, 629, 727, 1030, 1185, 1203
BstV2I	GAAGAC	1 cut(s)	285
BstX2I	RGATCY	2 cut(s)	65, 122
BstYI	RGATCY	2 cut(s)	65, 122
BsuRI	GGCC	8 cut(s)	224, 369, 525, 714, 932, 1118, 1243, 1251
BtgI	CCRYGG	1 cut(s)	183
BtsCI	GGATG	3 cut(s)	888, 892, 1156
BtsI	GCAGTG	1 cut(s)	1287
BtsIMutI	CAGTG	5 cut(s)	232, 609, 992, 1105, 1287
BveI	ACCTGC	1 cut(s)	856
Cac8I	GCNNGC	4 cut(s)	52, 134, 1178, 1196
CciI	TCATGA	1 cut(s)	483
CfoI	GCGC	3 cut(s)	56, 172, 177
Cfr10I	RCCGGY	2 cut(s)	50, 509
Cfr13I	GGNCC	6 cut(s)	523, 845, 930, 947, 1241, 1267
Cfr42I	CCGCGG	1 cut(s)	186
Csp6I	GTAC	1 cut(s)	80
CspAI	ACCGGT	1 cut(s)	509
CspCI	CAANNNNNGTGG	2 cut(s)	939, 974
CviAII	CATG	5 cut(s)	283, 310, 484, 736, 872
CviQI	GTAC	1 cut(s)	80
DdeI	CTNAG	5 cut(s)	318, 809, 1026, 1093, 1281
DinI	GGCGCC	1 cut(s)	55
DpnI	GATC	8 cut(s)	67, 124, 181, 441, 669, 825, 1002, 1221
DpnII	GATC	8 cut(s)	65, 122, 179, 439, 667, 823, 1000, 1219
EaeI	YGGCCR	3 cut(s)	367, 712, 1249
Eam1104I	CTCTTC	2 cut(s)	91, 500
EarI	CTCTTC	2 cut(s)	91, 500
Ecl136II	GAGCTC	2 cut(s)	493, 1012
Eco130I	CCWWGG	2 cut(s)	526, 954
Eco24I	GRGCYC	2 cut(s)	495, 1014
Eco31I	GGTCTC	2 cut(s)	202, 1044
Eco47I	GGWCC	3 cut(s)	845, 947, 1267
Eco53kI	GAGCTC	2 cut(s)	493, 1012
Eco57I	CTGAAG	2 cut(s)	607, 1133
Eco72I	CACGTG	1 cut(s)	673
Eco88I	CYCGRG	1 cut(s)	1202
EcoICRI	GAGCTC	2 cut(s)	493, 1012
EcoO109I	RGGNCCY	3 cut(s)	845, 1241, 1267
EcoRII	CCWGG	1 cut(s)	932
EcoT14I	CCWWGG	2 cut(s)	526, 954
EcoT22I	ATGCAT	1 cut(s)	543
EcoT38I	GRGCYC	2 cut(s)	495, 1014
EgeI	GGCGCC	1 cut(s)	55
EheI	GGCGCC	1 cut(s)	55
ErhI	CCWWGG	2 cut(s)	526, 954
FaeI	CATG	5 cut(s)	286, 313, 487, 739, 875
FaqI	GGGAC	3 cut(s)	452, 712, 858
FatI	CATG	5 cut(s)	282, 309, 483, 735, 871
FauI	CCCGC	2 cut(s)	137, 1185
FauNDI	CATATG	1 cut(s)	543
FbaI	TGATCA	2 cut(s)	439, 667
FokI	GGATG	3 cut(s)	895, 899, 1163
FriOI	GRGCYC	2 cut(s)	495, 1014
FspI	TGCGCA	1 cut(s)	171
GlaI	GCGC	3 cut(s)	55, 171, 176
GsaI	CCCAGC	1 cut(s)	28
HaeII	RGCGCY	2 cut(s)	57, 178
HaeIII	GGCC	8 cut(s)	224, 369, 525, 714, 932, 1118, 1243, 1251
HapII	CCGG	6 cut(s)	34, 51, 144, 510, 520, 864
HhaI	GCGC	3 cut(s)	56, 172, 177
Hin1I	GRCGYC	1 cut(s)	54
Hin1II	CATG	5 cut(s)	286, 313, 487, 739, 875
Hin6I	GCGC	3 cut(s)	54, 170, 175
HinP1I	GCGC	3 cut(s)	54, 170, 175
HincII	GTYRAC	1 cut(s)	384
HindII	GTYRAC	1 cut(s)	384
HindIII	AAGCTT	1 cut(s)	398
HinfI	GANTC	2 cut(s)	106, 598
HpaII	CCGG	6 cut(s)	34, 51, 144, 510, 520, 864
HphI	GGTGA	4 cut(s)	347, 436, 602, 910
Hpy166II	GTNNAC	5 cut(s)	355, 384, 448, 877, 1103
Hpy188I	TCNGA	6 cut(s)	140, 202, 321, 500, 810, 823
Hpy188III	TCNNGA	5 cut(s)	476, 484, 827, 1004, 1204
Hpy8I	GTNNAC	5 cut(s)	355, 384, 448, 877, 1103
Hpy99I	CGWCG	1 cut(s)	1172
HpyCH4III	ACNGT	3 cut(s)	421, 437, 665
HpyCH4IV	ACGT	2 cut(s)	444, 672
HpyCH4V	TGCA	4 cut(s)	541, 581, 743, 851
HpyF10VI	GCNNNNNNNGC	8 cut(s)	34, 56, 169, 406, 614, 917, 1031, 1040
HpyF3I	CTNAG	5 cut(s)	318, 809, 1026, 1093, 1281
HpySE526I	ACGT	2 cut(s)	444, 672
Hsp92I	GRCGYC	1 cut(s)	54
Hsp92II	CATG	5 cut(s)	286, 313, 487, 739, 875
HspAI	GCGC	3 cut(s)	54, 170, 175
KasI	GGCGCC	1 cut(s)	53
KpnI	GGTACC	1 cut(s)	83
KroI	GCCGGC	1 cut(s)	50
KroNI	GCCGGC	1 cut(s)	52
Ksp22I	TGATCA	2 cut(s)	439, 667
KspI	CCGCGG	1 cut(s)	186
Kzo9I	GATC	8 cut(s)	65, 122, 179, 439, 667, 823, 1000, 1219
LguI	GCTCTTC	1 cut(s)	500
LmnI	GCTCC	4 cut(s)	141, 268, 1017, 1185
Lsp1109I	GCAGC	8 cut(s)	46, 142, 184, 629, 727, 1030, 1185, 1203
LweI	GCATC	3 cut(s)	528, 814, 1141
MaeII	ACGT	2 cut(s)	444, 672
MaeIII	GTNAC	2 cut(s)	673, 1016
MalI	GATC	8 cut(s)	67, 124, 181, 441, 669, 825, 1002, 1221
MbiI	CCGCTC	1 cut(s)	1180
MboI	GATC	8 cut(s)	65, 122, 179, 439, 667, 823, 1000, 1219
MboII	GAAGA	8 cut(s)	78, 229, 290, 425, 487, 850, 1081, 1141
MfeI	CAATTG	2 cut(s)	759, 921
MflI	RGATCY	2 cut(s)	65, 122
MhlI	GDGCHC	6 cut(s)	319, 431, 495, 1014, 1089, 1289
MlsI	TGGCCA	2 cut(s)	369, 714
MluCI	AATT	6 cut(s)	562, 759, 781, 831, 921, 1274
MluNI	TGGCCA	2 cut(s)	369, 714
Mly113I	GGCGCC	1 cut(s)	54
MlyI	GAGTC	1 cut(s)	100
MmeI	TCCRAC	1 cut(s)	163
Mox20I	TGGCCA	2 cut(s)	369, 714
Mph1103I	ATGCAT	1 cut(s)	543
MreI	CGCCGGCG	1 cut(s)	50
MroNI	GCCGGC	1 cut(s)	50
MroXI	GAANNNNTTC	1 cut(s)	597
MscI	TGGCCA	2 cut(s)	369, 714
Msp20I	TGGCCA	2 cut(s)	369, 714
MspA1I	CMGCKG	3 cut(s)	59, 185, 1198
MspI	CCGG	6 cut(s)	34, 51, 144, 510, 520, 864
MspR9I	CCNGG	4 cut(s)	144, 521, 864, 934
MteI	GCGCNGCGC	1 cut(s)	173
MunI	CAATTG	2 cut(s)	759, 921
MvaI	CCWGG	1 cut(s)	934
MvnI	CGCG	1 cut(s)	185
MwoI	GCNNNNNNNGC	8 cut(s)	34, 56, 169, 406, 614, 917, 1031, 1040
NaeI	GCCGGC	1 cut(s)	52
NarI	GGCGCC	1 cut(s)	54
NciI	CCSGG	3 cut(s)	144, 521, 864
NdeI	CATATG	1 cut(s)	543
NdeII	GATC	8 cut(s)	65, 122, 179, 439, 667, 823, 1000, 1219
NgoMIV	GCCGGC	1 cut(s)	50
NlaIII	CATG	5 cut(s)	286, 313, 487, 739, 875
NlaIV	GGNNCC	6 cut(s)	55, 81, 124, 524, 846, 1269
NmuCI	GTSAC	2 cut(s)	673, 1016
NsbI	TGCGCA	1 cut(s)	171
NsiI	ATGCAT	1 cut(s)	543
NspI	RCATGY	1 cut(s)	313
PaeR7I	CTCGAG	1 cut(s)	1202
PagI	TCATGA	1 cut(s)	483
PciI	ACATGT	1 cut(s)	309
PciSI	GCTCTTC	1 cut(s)	500
PdiI	GCCGGC	1 cut(s)	52
PdmI	GAANNNNTTC	1 cut(s)	597
PfeI	GAWTC	1 cut(s)	598
PflFI	GACNNNGTC	1 cut(s)	109
PinAI	ACCGGT	1 cut(s)	509
PleI	GAGTC	1 cut(s)	100
PluTI	GGCGCC	1 cut(s)	57
PmaCI	CACGTG	1 cut(s)	673
PmlI	CACGTG	1 cut(s)	673
PpsI	GAGTC	1 cut(s)	100
Ppu21I	YACGTR	1 cut(s)	673
PpuMI	RGGWCCY	2 cut(s)	845, 1267
PscI	ACATGT	1 cut(s)	309
Psp124BI	GAGCTC	2 cut(s)	495, 1014
Psp5II	RGGWCCY	2 cut(s)	845, 1267
Psp6I	CCWGG	1 cut(s)	932
PspCI	CACGTG	1 cut(s)	673
PspFI	CCCAGC	1 cut(s)	24
PspGI	CCWGG	1 cut(s)	932
PspN4I	GGNNCC	6 cut(s)	55, 81, 124, 524, 846, 1269
PspPI	GGNCC	6 cut(s)	523, 845, 930, 947, 1241, 1267
PspPPI	RGGWCCY	2 cut(s)	845, 1267
PsuI	RGATCY	2 cut(s)	65, 122
PsyI	GACNNNGTC	1 cut(s)	109
PvuII	CAGCTG	1 cut(s)	1198
RsaI	GTAC	1 cut(s)	81
RsaNI	GTAC	1 cut(s)	80
SacI	GAGCTC	2 cut(s)	495, 1014
SacII	CCGCGG	1 cut(s)	186
SapI	GCTCTTC	1 cut(s)	500
Sau3AI	GATC	8 cut(s)	65, 122, 179, 439, 667, 823, 1000, 1219
Sau96I	GGNCC	6 cut(s)	523, 845, 930, 947, 1241, 1267
SchI	GAGTC	1 cut(s)	100
ScrFI	CCNGG	4 cut(s)	144, 521, 864, 934
SduI	GDGCHC	6 cut(s)	319, 431, 495, 1014, 1089, 1289
SfaNI	GCATC	3 cut(s)	528, 814, 1141
SfcI	CTRYAG	1 cut(s)	1255
SfoI	GGCGCC	1 cut(s)	55
Sfr274I	CTCGAG	1 cut(s)	1202
Sfr303I	CCGCGG	1 cut(s)	186
SgrAI	CRCCGGYG	1 cut(s)	50
SgrBI	CCGCGG	1 cut(s)	186
SinI	GGWCC	3 cut(s)	845, 947, 1267
SlaI	CTCGAG	1 cut(s)	1202
SmlI	CTYRAG	2 cut(s)	1145, 1202
SmoI	CTYRAG	2 cut(s)	1145, 1202
Sse9I	AATT	6 cut(s)	562, 759, 781, 831, 921, 1274
SsiI	CCGC	8 cut(s)	15, 48, 57, 130, 183, 185, 1178, 1252
SspDI	GGCGCC	1 cut(s)	53
SstI	GAGCTC	2 cut(s)	495, 1014
StyD4I	CCNGG	4 cut(s)	142, 519, 862, 932
StyI	CCWWGG	2 cut(s)	526, 954
TaaI	ACNGT	3 cut(s)	421, 437, 665
TaiI	ACGT	2 cut(s)	447, 675
TaqI	TCGA	2 cut(s)	536, 1203
TaqII	GACCGA	1 cut(s)	184
TasI	AATT	6 cut(s)	562, 759, 781, 831, 921, 1274
TauI	GCSGC	3 cut(s)	17, 59, 1254
TfiI	GAWTC	1 cut(s)	598
TscAI	CASTG	5 cut(s)	232, 609, 999, 1105, 1294
TseFI	GTSAC	2 cut(s)	673, 1016
TseI	GCWGC	8 cut(s)	59, 155, 172, 617, 740, 1043, 1191, 1198
Tsp45I	GTSAC	2 cut(s)	673, 1016
TspDTI	ATGAA	3 cut(s)	291, 382, 860
TspGWI	ACGGA	2 cut(s)	99, 1004
TspRI	CASTG	5 cut(s)	232, 609, 999, 1105, 1294
Tth111I	GACNNNGTC	1 cut(s)	109
VpaK11BI	GGWCC	3 cut(s)	845, 947, 1267
XapI	RAATTY	2 cut(s)	831, 1274
XceI	RCATGY	1 cut(s)	313
XcmI	CCANNNNNNNNNTGG	1 cut(s)	566
XhoI	CTCGAG	1 cut(s)	1202
XmnI	GAANNNNTTC	1 cut(s)	597
Zsp2I	ATGCAT	1 cut(s)	543

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.