The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01090 |
| fragaria_vesca | FvH4_7g17660 |
| malus_domestica | MD07G1159600.v1.1 |
| prunus_persica | Prupe.2G197700_v2.0.a1 |
| pyrus_communis | pycom01g11280 pycom01g11290 pycom07g15610 |
| rosa_chinensis | RchiOBHm_Chr1g0334521 RchiOBHm_Chr1g0361101 |
| rosa_laevigata | RLG00000027748 RLG00000029447 |
| rosa_multiflora | Rmu_sc0003333.1_g000006 Rmu_sc0034406.1_g000004 Rmu_ssc0000404.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00295430 Rroxscaffold_4G00316780 |
| rosa_rugosa | Rorug01G0285600 |
| rosa_samantha | Rh1AG296900 Rh1BG261200 Rh1CG278500 Rh1DG143600 Rh1DG291200 |
| rosa_wichuraiana | Rw0G002890 Rw1G011520 Rw1G026230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 6 cut(s) | 15, 54, 130, 144, 172, 180 |
| AclWI | GGATC | 3 cut(s) | 63, 130, 171 |
| AcoI | YGGCCR | 1 cut(s) | 363 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 103 |
| AflIII | ACRYGT | 1 cut(s) | 305 |
| AjnI | CCWGG | 1 cut(s) | 222 |
| AluBI | AGCT | 6 cut(s) | 43, 136, 203, 268, 373, 396 |
| AluI | AGCT | 6 cut(s) | 43, 136, 203, 268, 373, 396 |
| Alw21I | GWGCWC | 1 cut(s) | 315 |
| Alw26I | GTCTC | 2 cut(s) | 199, 381 |
| AlwI | GGATC | 3 cut(s) | 63, 130, 171 |
| AoxI | GGCC | 2 cut(s) | 27, 363 |
| ApeKI | GCWGC | 1 cut(s) | 91 |
| AspS9I | GGNCC | 2 cut(s) | 28, 220 |
| AsuHPI | GGTGA | 1 cut(s) | 343 |
| AvaII | GGWCC | 1 cut(s) | 220 |
| BalI | TGGCCA | 1 cut(s) | 365 |
| BbsI | GAAGAC | 1 cut(s) | 282 |
| Bbv12I | GWGCWC | 1 cut(s) | 315 |
| BbvI | GCAGC | 1 cut(s) | 78 |
| BceAI | ACGGC | 2 cut(s) | 167, 176 |
| BciT130I | CCWGG | 1 cut(s) | 224 |
| BcoDI | GTCTC | 2 cut(s) | 199, 381 |
| BisI | GCNGC | 1 cut(s) | 92 |
| BlsI | GCNGC | 1 cut(s) | 93 |
| Bme1390I | CCNGG | 1 cut(s) | 224 |
| Bme18I | GGWCC | 1 cut(s) | 220 |
| BmgT120I | GGNCC | 2 cut(s) | 28, 220 |
| BmrFI | CCNGG | 1 cut(s) | 224 |
| BmrI | ACTGGG | 1 cut(s) | 392 |
| BmsI | GCATC | 1 cut(s) | 116 |
| BmuI | ACTGGG | 1 cut(s) | 392 |
| BpiI | GAAGAC | 1 cut(s) | 282 |
| BpmI | CTGGAG | 1 cut(s) | 23 |
| Bsa29I | ATCGAT | 1 cut(s) | 296 |
| BsaJI | CCNNGG | 1 cut(s) | 102 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 68, 98 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 103 |
| Bse1I | ACTGG | 1 cut(s) | 387 |
| BseBI | CCWGG | 1 cut(s) | 224 |
| BseCI | ATCGAT | 1 cut(s) | 296 |
| BseDI | CCNNGG | 1 cut(s) | 102 |
| BseGI | GGATG | 1 cut(s) | 107 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BseMII | CTCAG | 1 cut(s) | 328 |
| BseNI | ACTGG | 1 cut(s) | 387 |
| BseXI | GCAGC | 1 cut(s) | 78 |
| BseYI | CCCAGC | 1 cut(s) | 30 |
| BshFI | GGCC | 2 cut(s) | 29, 365 |
| BshVI | ATCGAT | 1 cut(s) | 296 |
| BsiHKAI | GWGCWC | 1 cut(s) | 315 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BsmAI | GTCTC | 2 cut(s) | 199, 381 |
| BsmBI | CGTCTC | 1 cut(s) | 199 |
| BsnI | GGCC | 2 cut(s) | 29, 365 |
| Bsp1286I | GDGCHC | 1 cut(s) | 315 |
| Bsp143I | GATC | 5 cut(s) | 68, 122, 176, 293, 297 |
| BspACI | CCGC | 6 cut(s) | 15, 54, 130, 144, 172, 180 |
| BspANI | GGCC | 2 cut(s) | 29, 365 |
| BspCNI | CTCAG | 1 cut(s) | 327 |
| BspDI | ATCGAT | 1 cut(s) | 296 |
| BspPI | GGATC | 3 cut(s) | 63, 130, 171 |
| BsrI | ACTGG | 1 cut(s) | 387 |
| BssECI | CCNNGG | 1 cut(s) | 102 |
| BssMI | GATC | 5 cut(s) | 68, 122, 176, 293, 297 |
| BssT1I | CCWWGG | 1 cut(s) | 102 |
| Bst2UI | CCWGG | 1 cut(s) | 224 |
| BstC8I | GCNNGC | 2 cut(s) | 58, 134 |
| BstDEI | CTNAG | 1 cut(s) | 314 |
| BstF5I | GGATG | 1 cut(s) | 107 |
| BstKTI | GATC | 5 cut(s) | 71, 125, 179, 296, 300 |
| BstMAI | GTCTC | 2 cut(s) | 199, 381 |
| BstMBI | GATC | 5 cut(s) | 68, 122, 176, 293, 297 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 40, 88, 188 |
| BstNI | CCWGG | 1 cut(s) | 224 |
| BstNSI | RCATGY | 1 cut(s) | 309 |
| BstSCI | CCNGG | 1 cut(s) | 222 |
| BstV1I | GCAGC | 1 cut(s) | 78 |
| BstV2I | GAAGAC | 1 cut(s) | 282 |
| BstX2I | RGATCY | 2 cut(s) | 68, 122 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 25 |
| BstYI | RGATCY | 2 cut(s) | 68, 122 |
| Bsu15I | ATCGAT | 1 cut(s) | 296 |
| BsuRI | GGCC | 2 cut(s) | 29, 365 |
| BsuTUI | ATCGAT | 1 cut(s) | 296 |
| BtsCI | GGATG | 1 cut(s) | 107 |
| Cac8I | GCNNGC | 2 cut(s) | 58, 134 |
| Cfr13I | GGNCC | 2 cut(s) | 28, 220 |
| ClaI | ATCGAT | 1 cut(s) | 296 |
| CviAII | CATG | 2 cut(s) | 280, 306 |
| DdeI | CTNAG | 1 cut(s) | 314 |
| DpnI | GATC | 5 cut(s) | 70, 124, 178, 295, 299 |
| DpnII | GATC | 5 cut(s) | 68, 122, 176, 293, 297 |
| EaeI | YGGCCR | 1 cut(s) | 363 |
| EciI | GGCGGA | 2 cut(s) | 4, 169 |
| Eco130I | CCWWGG | 1 cut(s) | 102 |
| Eco47I | GGWCC | 1 cut(s) | 220 |
| EcoRII | CCWGG | 1 cut(s) | 222 |
| EcoT14I | CCWWGG | 1 cut(s) | 102 |
| ErhI | CCWWGG | 1 cut(s) | 102 |
| Esp3I | CGTCTC | 1 cut(s) | 199 |
| FaeI | CATG | 2 cut(s) | 283, 309 |
| FaiI | YATR | 3 cut(s) | 273, 281, 307 |
| FatI | CATG | 2 cut(s) | 279, 305 |
| FauI | CCCGC | 2 cut(s) | 137, 151 |
| Fnu4HI | GCNGC | 1 cut(s) | 92 |
| FokI | GGATG | 1 cut(s) | 94 |
| Fsp4HI | GCNGC | 1 cut(s) | 92 |
| GluI | GCNGC | 1 cut(s) | 92 |
| GsaI | CCCAGC | 1 cut(s) | 34 |
| GsuI | CTGGAG | 1 cut(s) | 23 |
| HaeIII | GGCC | 2 cut(s) | 29, 365 |
| Hin1II | CATG | 2 cut(s) | 283, 309 |
| HindIII | AAGCTT | 1 cut(s) | 394 |
| HinfI | GANTC | 1 cut(s) | 412 |
| HphI | GGTGA | 1 cut(s) | 343 |
| Hpy166II | GTNNAC | 1 cut(s) | 351 |
| Hpy188I | TCNGA | 4 cut(s) | 122, 140, 199, 317 |
| Hpy188III | TCNNGA | 1 cut(s) | 301 |
| Hpy8I | GTNNAC | 1 cut(s) | 351 |
| Hpy99I | CGWCG | 1 cut(s) | 188 |
| HpyAV | CCTTC | 5 cut(s) | 16, 211, 244, 251, 399 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 40, 88, 188 |
| HpyF3I | CTNAG | 1 cut(s) | 314 |
| Hsp92II | CATG | 2 cut(s) | 283, 309 |
| Kzo9I | GATC | 5 cut(s) | 68, 122, 176, 293, 297 |
| LmnI | GCTCC | 3 cut(s) | 99, 141, 265 |
| LpnPI | CCDG | 9 cut(s) | 44, 53, 70, 79, 101, 209, 236, 286, 368 |
| Lsp1109I | GCAGC | 1 cut(s) | 78 |
| LweI | GCATC | 1 cut(s) | 116 |
| MalI | GATC | 5 cut(s) | 70, 124, 178, 295, 299 |
| MboI | GATC | 5 cut(s) | 68, 122, 176, 293, 297 |
| MboII | GAAGA | 3 cut(s) | 222, 226, 287 |
| MflI | RGATCY | 2 cut(s) | 68, 122 |
| MhlI | GDGCHC | 1 cut(s) | 315 |
| MlsI | TGGCCA | 1 cut(s) | 365 |
| MluNI | TGGCCA | 1 cut(s) | 365 |
| MmeI | TCCRAC | 1 cut(s) | 163 |
| MnlI | CCTC | 7 cut(s) | 45, 94, 121, 161, 247, 322, 402 |
| Mox20I | TGGCCA | 1 cut(s) | 365 |
| MscI | TGGCCA | 1 cut(s) | 365 |
| MslI | CAYNNNNRTG | 1 cut(s) | 162 |
| Msp20I | TGGCCA | 1 cut(s) | 365 |
| MspR9I | CCNGG | 1 cut(s) | 224 |
| MvaI | CCWGG | 1 cut(s) | 224 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 40, 88, 188 |
| NdeII | GATC | 5 cut(s) | 68, 122, 176, 293, 297 |
| NlaIII | CATG | 2 cut(s) | 283, 309 |
| NspI | RCATGY | 1 cut(s) | 309 |
| PciI | ACATGT | 1 cut(s) | 305 |
| PfeI | GAWTC | 1 cut(s) | 412 |
| PkrI | GCNGC | 1 cut(s) | 93 |
| PscI | ACATGT | 1 cut(s) | 305 |
| Psp6I | CCWGG | 1 cut(s) | 222 |
| PspFI | CCCAGC | 1 cut(s) | 30 |
| PspGI | CCWGG | 1 cut(s) | 222 |
| PspPI | GGNCC | 2 cut(s) | 28, 220 |
| PsuI | RGATCY | 2 cut(s) | 68, 122 |
| RseI | CAYNNNNRTG | 1 cut(s) | 162 |
| SatI | GCNGC | 1 cut(s) | 92 |
| Sau3AI | GATC | 5 cut(s) | 68, 122, 176, 293, 297 |
| Sau96I | GGNCC | 2 cut(s) | 28, 220 |
| ScrFI | CCNGG | 1 cut(s) | 224 |
| SduI | GDGCHC | 1 cut(s) | 315 |
| SetI | ASST | 9 cut(s) | 45, 138, 205, 222, 262, 270, 356, 375, 398 |
| SfaNI | GCATC | 1 cut(s) | 116 |
| SinI | GGWCC | 1 cut(s) | 220 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 162 |
| SsiI | CCGC | 6 cut(s) | 15, 54, 130, 144, 172, 180 |
| StyD4I | CCNGG | 1 cut(s) | 222 |
| StyI | CCWWGG | 1 cut(s) | 102 |
| TaqI | TCGA | 1 cut(s) | 296 |
| TfiI | GAWTC | 1 cut(s) | 412 |
| TseI | GCWGC | 1 cut(s) | 91 |
| TspDTI | ATGAA | 1 cut(s) | 288 |
| VpaK11BI | GGWCC | 1 cut(s) | 220 |
| XceI | RCATGY | 1 cut(s) | 309 |