pycom07g15610

The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
18064459 .. 18066660
2202 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g15610.2

Sequence Viewer

Length: 1299 bp
ATGTCCTTCTCCTCCGCCACCAATTTGGCCCAGCCCCTCCAGCTCAACAATGCCGCCGCCACTCCCAGATCCAATGACATGCCCTCCCTCCTGCTCCCCCCCAAGGCATCCTCTTTTCTCGGATCTACCCGCAAGTTCCGACCCGCTTCCCTCTCTCATTCCAGTGCTCACCGCCCATCCGCCGTCGTTGCCGTCTCCGAAGCTGTTAAGAAGAAGAAGGTCCAGGCTTCCTCCAATCTGCTAATAACAAAAGAGGAGGGATTGGAGCTGTATGAAGACATGGTATTGGGTCGCTCTTTCGAGGACATGTGTGCTCAGATGTATTACAGAGGCAAAATGTTCGGGTTCGTTCACCTTTACAATGGCCAAGAAGCCGTATCAACTGGGTTTATCAAGCTTACAAAGAAGGAGGATTCTGTGGTGAGCACATACCGCGATCACGTGCACTCGTTGAGTAAGGGTGTCCCTGCTCGCGAGGTGATGAGTGAGCTCTTTGGAAAGGCTACTGGTTGTTGCCGAGGCCAAGGTGGTTCTATGCACATGTTTTCGAAAGAGTACAATGTGCTCGGTGGGTTCGCATTTATTGGTGAAGGTATACCAGTGGCAACAGGTGCAGCATTCTCTTCTAAGTACAGGAGGGAAGTGATGAAACAGGCAGACTCTGATCACGTGACTTTGGCATTTTTTGGAGATGGAACTGCTAATAACGGCCAGTTCTTCGAGTGTTTGAACATGGCAGCATTGTGGAAATTGCCGATTATTTTCGTTGTGGAGAACAATTTGTGGGCCATTGGAATGTCGCATTTGAGGGCTACTTCTGATCCCGAAATTTGGAAGAAGGGGCCTGCGTTTGGTATGCCAGGTGTTCATGTGGATGGTATGGATGTGTTGAAGGTGAGGGAGGTGGCAAAGGAGGCGATTGGAAGGGCCAGGAGAGGAGAAGGGCCAACTTTGGTTGAATGTGAAACATACAGGTTCAGAGGACACTCATTGGCAGATCCCGATGAGCTTCGTGACCCTGCTGAGAAGGCACACTACGCTGCCAGAGACCCCATCACTGCCCTCAAGAAATACATACTTGAGAACAATTTGGCGACTGAACAAGACTTGAAGGCCATCCATAAGAAGATCGATGAGTTGGTTGAGGATGCCGTTGAGTTTGCAGATGAGAGCCCCCTTCCACCTCGCAGCCAGCTGCTTGAGAATGTGTTTGCCGATCCCAAGGGTTTTGGAATCGGGCCTGATGGCAGTTACAGATGCGAGGATCCTAAATTCACTCAGGGCACTGCTCATGTCTAA

Protein Analysis

433

Amino Acids

47.4

Weight (kDa)

6.68

Isoelectric Point (pI)

39.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 595
AccII CGCG 2 cut(s) 435, 474
AciI CCGC 8 cut(s) 15, 54, 57, 130, 144, 172, 180, 433
AclWI GGATC 7 cut(s) 63, 130, 815, 992, 1211, 1259, 1272
AcoI YGGCCR 2 cut(s) 364, 709
AcsI RAATTY 2 cut(s) 828, 1271
AcvI CACGTG 2 cut(s) 442, 670
AfaI GTAC 2 cut(s) 557, 632
AfiI CCNNNNNNNGG 3 cut(s) 103, 831, 851
AflIII ACRYGT 2 cut(s) 306, 540
AgsI TTSAA 4 cut(s) 730, 892, 959, 1111
AjnI CCWGG 3 cut(s) 222, 859, 929
AluBI AGCT 7 cut(s) 43, 203, 268, 397, 490, 1009, 1195
AluI AGCT 7 cut(s) 43, 203, 268, 397, 490, 1009, 1195
Alw21I GWGCWC 6 cut(s) 169, 316, 428, 447, 492, 567
Alw26I GTCTC 2 cut(s) 199, 1041
Alw44I GTGCAC 1 cut(s) 443
AlwI GGATC 7 cut(s) 63, 130, 815, 992, 1211, 1259, 1272
AlwNI CAGNNNCTG 1 cut(s) 662
ApaLI GTGCAC 1 cut(s) 443
ApeKI GCWGC 5 cut(s) 614, 737, 1040, 1188, 1195
ApoI RAATTY 2 cut(s) 828, 1271
AspS9I GGNCC 7 cut(s) 28, 220, 786, 842, 927, 944, 1238
AsuHPI GGTGA 6 cut(s) 161, 344, 433, 490, 599, 907
AsuII TTCGAA 1 cut(s) 548
AvaII GGWCC 1 cut(s) 220
BaeGI GKGCMC 2 cut(s) 447, 1286
BalI TGGCCA 1 cut(s) 366
BamHI GGATCC 1 cut(s) 1264
BanII GRGCYC 2 cut(s) 492, 1175
BarI GAAGNNNNNNTAC 2 cut(s) 1019, 1051
BbrPI CACGTG 2 cut(s) 442, 670
BbsI GAAGAC 1 cut(s) 282
Bbv12I GWGCWC 6 cut(s) 169, 316, 428, 447, 492, 567
BbvI GCAGC 5 cut(s) 626, 749, 1027, 1182, 1200
BccI CCATC 6 cut(s) 184, 686, 869, 1061, 1124, 1238
BceAI ACGGC 5 cut(s) 167, 176, 359, 724, 1136
BcgI CGANNNNNNTGC 2 cut(s) 322, 356
BciT130I CCWGG 3 cut(s) 224, 861, 931
BclI TGATCA 1 cut(s) 664
BcoDI GTCTC 2 cut(s) 199, 1041
BisI GCNGC 7 cut(s) 54, 57, 615, 738, 1041, 1189, 1196
BlsI GCNGC 7 cut(s) 55, 58, 616, 739, 1042, 1190, 1197
Bme1390I CCNGG 3 cut(s) 224, 861, 931
Bme18I GGWCC 1 cut(s) 220
BmgT120I GGNCC 7 cut(s) 28, 220, 786, 842, 927, 944, 1238
BmiI GGNNCC 2 cut(s) 843, 1266
BmrFI CCNGG 3 cut(s) 224, 861, 931
BmrI ACTGGG 1 cut(s) 393
BmsI GCATC 3 cut(s) 116, 1138, 1247
BmuI ACTGGG 1 cut(s) 393
BpiI GAAGAC 1 cut(s) 282
BpmI CTGGAG 1 cut(s) 23
Bpu14I TTCGAA 1 cut(s) 548
BpuEI CTTGAG 3 cut(s) 1049, 1100, 1220
Bsa29I ATCGAT 1 cut(s) 1131
BsaAI YACGTR 2 cut(s) 442, 670
BsaI GGTCTC 1 cut(s) 1041
BsaJI CCNNGG 4 cut(s) 102, 517, 523, 1221
BsaXI ACNNNNNCTCC 2 cut(s) 68, 98
Bsc4I CCNNNNNNNGG 3 cut(s) 103, 831, 851
Bse1I ACTGG 5 cut(s) 162, 388, 511, 599, 712
BseBI CCWGG 3 cut(s) 224, 861, 931
BseCI ATCGAT 1 cut(s) 1131
BseDI CCNNGG 4 cut(s) 102, 517, 523, 1221
BseGI GGATG 6 cut(s) 107, 176, 880, 889, 1116, 1153
BseLI CCNNNNNNNGG 3 cut(s) 103, 831, 851
BseMII CTCAG 3 cut(s) 329, 1014, 1292
BseNI ACTGG 5 cut(s) 162, 388, 511, 599, 712
BseRI GAGGAG 2 cut(s) 269, 951
BseSI GKGCMC 2 cut(s) 447, 1286
BseXI GCAGC 5 cut(s) 626, 749, 1027, 1182, 1200
BseYI CCCAGC 1 cut(s) 30
BsgI GTGCAG 1 cut(s) 633
Bsh1236I CGCG 2 cut(s) 435, 474
BshVI ATCGAT 1 cut(s) 1131
BsiHKAI GWGCWC 6 cut(s) 169, 316, 428, 447, 492, 567
BslFI GGGAC 1 cut(s) 449
BslI CCNNNNNNNGG 3 cut(s) 103, 831, 851
BsmAI GTCTC 2 cut(s) 199, 1041
BsmBI CGTCTC 1 cut(s) 199
BsmFI GGGAC 1 cut(s) 449
BsmI GAATGC 1 cut(s) 617
Bso31I GGTCTC 1 cut(s) 1041
Bsp119I TTCGAA 1 cut(s) 548
Bsp1286I GDGCHC 8 cut(s) 169, 316, 428, 447, 492, 567, 1175, 1286
Bsp143I GATC 9 cut(s) 68, 122, 436, 664, 820, 997, 1128, 1216, 1264
Bsp68I TCGCGA 1 cut(s) 474
BspACI CCGC 8 cut(s) 15, 54, 57, 130, 144, 172, 180, 433
BspCNI CTCAG 3 cut(s) 328, 1015, 1291
BspDI ATCGAT 1 cut(s) 1131
BspFNI CGCG 2 cut(s) 435, 474
BspLI GGNNCC 2 cut(s) 843, 1266
BspPI GGATC 7 cut(s) 63, 130, 815, 992, 1211, 1259, 1272
BspT104I TTCGAA 1 cut(s) 548
BspTNI GGTCTC 1 cut(s) 1041
BsrI ACTGG 5 cut(s) 162, 388, 511, 599, 712
BssECI CCNNGG 4 cut(s) 102, 517, 523, 1221
BssMI GATC 9 cut(s) 68, 122, 436, 664, 820, 997, 1128, 1216, 1264
BssNAI GTATAC 1 cut(s) 596
BssT1I CCWWGG 3 cut(s) 102, 523, 1221
Bst1107I GTATAC 1 cut(s) 596
Bst2UI CCWGG 3 cut(s) 224, 861, 931
Bst6I CTCTTC 1 cut(s) 628
BstAPI GCANNNNNTGC 1 cut(s) 611
BstBAI YACGTR 2 cut(s) 442, 670
BstBI TTCGAA 1 cut(s) 548
BstC8I GCNNGC 3 cut(s) 472, 846, 1193
BstDEI CTNAG 4 cut(s) 315, 627, 1023, 1278
BstF5I GGATG 6 cut(s) 107, 176, 880, 889, 1116, 1153
BstFNI CGCG 2 cut(s) 435, 474
BstKTI GATC 9 cut(s) 71, 125, 439, 667, 823, 1000, 1131, 1219, 1267
BstMAI GTCTC 2 cut(s) 199, 1041
BstMBI GATC 9 cut(s) 68, 122, 436, 664, 820, 997, 1128, 1216, 1264
BstMWI GCNNNNNNNGC 7 cut(s) 40, 188, 432, 611, 914, 1028, 1037
BstNI CCWGG 3 cut(s) 224, 861, 931
BstNSI RCATGY 3 cut(s) 82, 310, 544
BstSCI CCNGG 3 cut(s) 222, 859, 929
BstSLI GKGCMC 2 cut(s) 447, 1286
BstUI CGCG 2 cut(s) 435, 474
BstV1I GCAGC 5 cut(s) 626, 749, 1027, 1182, 1200
BstV2I GAAGAC 1 cut(s) 282
BstX2I RGATCY 4 cut(s) 68, 122, 997, 1264
BstXI CCANNNNNNTGG 1 cut(s) 25
BstYI RGATCY 4 cut(s) 68, 122, 997, 1264
BstZ17I GTATAC 1 cut(s) 596
Bsu15I ATCGAT 1 cut(s) 1131
BsuTUI ATCGAT 1 cut(s) 1131
BtsCI GGATG 6 cut(s) 107, 176, 880, 889, 1116, 1153
BtsI GCAGTG 2 cut(s) 1056, 1284
BtsIMutI CAGTG 4 cut(s) 169, 606, 1056, 1284
BtuMI TCGCGA 1 cut(s) 474
Cac8I GCNNGC 3 cut(s) 472, 846, 1193
CaiI CAGNNNCTG 1 cut(s) 662
Cfr13I GGNCC 7 cut(s) 28, 220, 786, 842, 927, 944, 1238
ClaI ATCGAT 1 cut(s) 1131
Csp6I GTAC 2 cut(s) 556, 631
CviAII CATG 7 cut(s) 79, 280, 307, 541, 733, 869, 1292
CviQI GTAC 2 cut(s) 556, 631
DdeI CTNAG 4 cut(s) 315, 627, 1023, 1278
DpnI GATC 9 cut(s) 70, 124, 438, 666, 822, 999, 1130, 1218, 1266
DpnII GATC 9 cut(s) 68, 122, 436, 664, 820, 997, 1128, 1216, 1264
EaeI YGGCCR 2 cut(s) 364, 709
Eam1104I CTCTTC 1 cut(s) 628
EarI CTCTTC 1 cut(s) 628
EciI GGCGGA 2 cut(s) 4, 169
Ecl136II GAGCTC 1 cut(s) 490
Eco130I CCWWGG 3 cut(s) 102, 523, 1221
Eco24I GRGCYC 2 cut(s) 492, 1175
Eco31I GGTCTC 1 cut(s) 1041
Eco47I GGWCC 1 cut(s) 220
Eco53kI GAGCTC 1 cut(s) 490
Eco72I CACGTG 2 cut(s) 442, 670
EcoICRI GAGCTC 1 cut(s) 490
EcoO109I RGGNCCY 1 cut(s) 842
EcoRII CCWGG 3 cut(s) 222, 859, 929
EcoT14I CCWWGG 3 cut(s) 102, 523, 1221
EcoT38I GRGCYC 2 cut(s) 492, 1175
ErhI CCWWGG 3 cut(s) 102, 523, 1221
Esp3I CGTCTC 1 cut(s) 199
FaeI CATG 7 cut(s) 82, 283, 310, 544, 736, 872, 1295
FaqI GGGAC 1 cut(s) 449
FatI CATG 7 cut(s) 78, 279, 306, 540, 732, 868, 1291
FauI CCCGC 2 cut(s) 137, 151
FbaI TGATCA 1 cut(s) 664
FblI GTMKAC 1 cut(s) 595
Fnu4HI GCNGC 7 cut(s) 54, 57, 615, 738, 1041, 1189, 1196
FokI GGATG 6 cut(s) 94, 163, 887, 896, 1103, 1160
FriOI GRGCYC 2 cut(s) 492, 1175
Fsp4HI GCNGC 7 cut(s) 54, 57, 615, 738, 1041, 1189, 1196
GluI GCNGC 7 cut(s) 54, 57, 615, 738, 1041, 1189, 1196
GsaI CCCAGC 1 cut(s) 34
GsuI CTGGAG 1 cut(s) 23
Hin1II CATG 7 cut(s) 82, 283, 310, 544, 736, 872, 1295
HindIII AAGCTT 1 cut(s) 395
HinfI GANTC 3 cut(s) 413, 659, 1233
HphI GGTGA 6 cut(s) 161, 344, 433, 490, 599, 907
Hpy166II GTNNAC 3 cut(s) 352, 445, 596
Hpy188I TCNGA 7 cut(s) 122, 140, 199, 318, 664, 820, 980
Hpy188III TCNNGA 5 cut(s) 473, 824, 1001, 1013, 1066
Hpy8I GTNNAC 3 cut(s) 352, 445, 596
Hpy99I CGWCG 1 cut(s) 188
HpyCH4IV ACGT 2 cut(s) 441, 669
HpyCH4V TGCA 4 cut(s) 445, 538, 614, 1163
HpyF10VI GCNNNNNNNGC 7 cut(s) 40, 188, 432, 611, 914, 1028, 1037
HpyF3I CTNAG 4 cut(s) 315, 627, 1023, 1278
HpySE526I ACGT 2 cut(s) 441, 669
Hsp92II CATG 7 cut(s) 82, 283, 310, 544, 736, 872, 1295
Ksp22I TGATCA 1 cut(s) 664
Kzo9I GATC 9 cut(s) 68, 122, 436, 664, 820, 997, 1128, 1216, 1264
LmnI GCTCC 2 cut(s) 99, 265
Lsp1109I GCAGC 5 cut(s) 626, 749, 1027, 1182, 1200
LweI GCATC 3 cut(s) 116, 1138, 1247
MaeII ACGT 2 cut(s) 441, 669
MaeIII GTNAC 3 cut(s) 670, 1013, 1250
MalI GATC 9 cut(s) 70, 124, 438, 666, 822, 999, 1130, 1218, 1266
MboI GATC 9 cut(s) 68, 122, 436, 664, 820, 997, 1128, 1216, 1264
MboII GAAGA 7 cut(s) 223, 226, 287, 615, 709, 847, 1138
MflI RGATCY 4 cut(s) 68, 122, 997, 1264
MhlI GDGCHC 8 cut(s) 169, 316, 428, 447, 492, 567, 1175, 1286
MlsI TGGCCA 1 cut(s) 366
MluCI AATT 6 cut(s) 22, 749, 778, 828, 1087, 1271
MluNI TGGCCA 1 cut(s) 366
MlyI GAGTC 1 cut(s) 653
MmeI TCCRAC 1 cut(s) 163
Mox20I TGGCCA 1 cut(s) 366
MscI TGGCCA 1 cut(s) 366
MseI TTAA 1 cut(s) 207
MslI CAYNNNNRTG 3 cut(s) 162, 794, 873
Msp20I TGGCCA 1 cut(s) 366
MspA1I CMGCKG 1 cut(s) 1195
MspR9I CCNGG 3 cut(s) 224, 861, 931
Mva1269I GAATGC 1 cut(s) 617
MvaI CCWGG 3 cut(s) 224, 861, 931
MvnI CGCG 2 cut(s) 435, 474
MwoI GCNNNNNNNGC 7 cut(s) 40, 188, 432, 611, 914, 1028, 1037
NdeII GATC 9 cut(s) 68, 122, 436, 664, 820, 997, 1128, 1216, 1264
NlaIII CATG 7 cut(s) 82, 283, 310, 544, 736, 872, 1295
NlaIV GGNNCC 2 cut(s) 843, 1266
NmeAIII GCCGAG 1 cut(s) 542
NmuCI GTSAC 2 cut(s) 670, 1013
NruI TCGCGA 1 cut(s) 474
NspI RCATGY 3 cut(s) 82, 310, 544
NspV TTCGAA 1 cut(s) 548
PciI ACATGT 2 cut(s) 306, 540
PctI GAATGC 1 cut(s) 617
PfeI GAWTC 2 cut(s) 413, 1233
PkrI GCNGC 7 cut(s) 55, 58, 616, 739, 1042, 1190, 1197
PleI GAGTC 1 cut(s) 653
PmaCI CACGTG 2 cut(s) 442, 670
PmlI CACGTG 2 cut(s) 442, 670
PpsI GAGTC 1 cut(s) 653
Ppu21I YACGTR 2 cut(s) 442, 670
PscI ACATGT 2 cut(s) 306, 540
Psp124BI GAGCTC 1 cut(s) 492
Psp6I CCWGG 3 cut(s) 222, 859, 929
PspCI CACGTG 2 cut(s) 442, 670
PspFI CCCAGC 1 cut(s) 30
PspGI CCWGG 3 cut(s) 222, 859, 929
PspN4I GGNNCC 2 cut(s) 843, 1266
PspPI GGNCC 7 cut(s) 28, 220, 786, 842, 927, 944, 1238
PstNI CAGNNNCTG 1 cut(s) 662
PsuI RGATCY 4 cut(s) 68, 122, 997, 1264
PvuII CAGCTG 1 cut(s) 1195
RruI TCGCGA 1 cut(s) 474
RsaI GTAC 2 cut(s) 557, 632
RsaNI GTAC 2 cut(s) 556, 631
RseI CAYNNNNRTG 3 cut(s) 162, 794, 873
SacI GAGCTC 1 cut(s) 492
SaqAI TTAA 1 cut(s) 207
SatI GCNGC 7 cut(s) 54, 57, 615, 738, 1041, 1189, 1196
Sau3AI GATC 9 cut(s) 68, 122, 436, 664, 820, 997, 1128, 1216, 1264
Sau96I GGNCC 7 cut(s) 28, 220, 786, 842, 927, 944, 1238
SchI GAGTC 1 cut(s) 653
ScrFI CCNGG 3 cut(s) 224, 861, 931
SduI GDGCHC 8 cut(s) 169, 316, 428, 447, 492, 567, 1175, 1286
SfaNI GCATC 3 cut(s) 116, 1138, 1247
SfuI TTCGAA 1 cut(s) 548
SinI GGWCC 1 cut(s) 220
SmiMI CAYNNNNRTG 3 cut(s) 162, 794, 873
SmlI CTYRAG 3 cut(s) 1064, 1079, 1199
SmoI CTYRAG 3 cut(s) 1064, 1079, 1199
Sse9I AATT 6 cut(s) 22, 749, 778, 828, 1087, 1271
SsiI CCGC 8 cut(s) 15, 54, 57, 130, 144, 172, 180, 433
SstI GAGCTC 1 cut(s) 492
StyD4I CCNGG 3 cut(s) 222, 859, 929
StyI CCWWGG 3 cut(s) 102, 523, 1221
TaiI ACGT 2 cut(s) 444, 672
TaqI TCGA 4 cut(s) 300, 548, 720, 1131
TasI AATT 6 cut(s) 22, 749, 778, 828, 1087, 1271
TatI WGTACW 2 cut(s) 555, 630
TauI GCSGC 2 cut(s) 56, 59
TfiI GAWTC 2 cut(s) 413, 1233
Tru1I TTAA 1 cut(s) 207
Tru9I TTAA 1 cut(s) 207
TscAI CASTG 4 cut(s) 169, 606, 1063, 1291
TseFI GTSAC 2 cut(s) 670, 1013
TseI GCWGC 5 cut(s) 614, 737, 1040, 1188, 1195
Tsp45I GTSAC 2 cut(s) 670, 1013
TspDTI ATGAA 3 cut(s) 288, 662, 857
TspRI CASTG 4 cut(s) 169, 606, 1063, 1291
VneI GTGCAC 1 cut(s) 443
VpaK11BI GGWCC 1 cut(s) 220
XapI RAATTY 2 cut(s) 828, 1271
XceI RCATGY 3 cut(s) 82, 310, 544
XmiI GTMKAC 1 cut(s) 595
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.