Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0004547

Physical Location & Seq

Genomic Coordinates Reverse (-)

24963339 .. 24966396

Gene Structure 3058 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G221700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 927 bp

ATGGCTATTTTGAACGTGAGTTTGAGAGGCACTGCTGCTTCTACTTCATCATCCTCTCTGCCCTCTTGGCCACACCTGTCAAATTCAGTCCCTTTCTCTCTCTCTAATAAACCAGTGATAGCCAAATTTCCAAACACCACCATACTATCTCCTCCTAAGCTTCGACTTCAAGCTTCTTTTGGAAAGAAAACCAGAGCTTCACTCTCTGCAACTATGGCAACTGGTGGGCAAGAGGTTCTGCCACCAGCTCTGACTTCTACCTCAGACCCACCTCCGCTCTTCGATGGGAAAACAAGGTTGTATATATCTTACCAATGCCCATATGCACAGCGTGCGTGGATTTCCCGGAACTGTAAGGGACTGGAGGAAAATATACAATTGGTTCCTATTGATCTGCAAGACAGGCCTGCTTGGTACAAGGAGAAAGTCTACCCACCTAACAAGGTGCCGTCGCTGGAACACAATAACGAAGTCAAAGGAGAGAGTCTTGATTTGATTAGATATATTGACAGTCACTTTGAAGGGCCTTCACTGTTCCCTGATGATCCTGCAAAGAGAGAATTTGCAGAAGAGTTGCTGTCCTACACAGACTCCTTCAATAAATCTGTGTTTGCTTCATTTAAAGAGGACGGAACCAAGGCAGCTGCAGGTGCTGCATTTGACTATATTGAAACTGCTCTTTCCAAATTTGAAGATGGACCTTTCTTTCTTGGCACTTTCAGTCTGGTGGATATAGCTTATGCTCCATTCCTTGAAAGATTTCAGCCTTTCTCACTGGAAGTGAAGAAGTATGACATCACTGCAGGCAGGCCTAAACTGGCAGCATGGTTTGAGGAGATGAACAAAAATTTAGCTTACAAAAAAACCCGGCGTGATCCCAAAGAGCTCGTTGAAAGCTACAAGAGACGCTTTTTGGCACAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010731 GO:0016740 GO:0016765 GO:0019538 GO:0034641 GO:0036211 GO:0043170 GO:0043412 GO:0043603 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0051186 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C_2 GST_N_3

Protein Analysis

309

Amino Acids

34.55

Weight (kDa)

8.95

Isoelectric Point (pI)

54.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004547)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g20610 FvH4_7g20620 FvH4_7g20620
malus_domestica	MD01G1115000.v1.1 MD07G1183000.v1.1
prunus_persica	Prupe.2G221700_v2.0.a1 Prupe.2G221700_v2.0.a1
pyrus_communis	pycom01g14390
rosa_chinensis	RchiOBHm_Chr1g0364651 RchiOBHm_Chr1g0364661
rosa_laevigata	RLG00000027469
rosa_multiflora	Rmu_sc0024218.1_g000001 Rmu_ssc0000112.1_g000036 Rmu_ssc0000112.1_g000037 Rmu_ssc0000282.1_g000016
rosa_roxburghii	Rroxscaffold_1G00029240 Rroxscaffold_4G00291770 Rroxscaffold_4G00292190 Rroxscaffold_7G00185900 Rroxscaffold_7G00191070 Rroxscaffold_7G00191090 Rroxscaffold_7G00197330
rosa_rugosa	Rorug01G0317400
rosa_samantha	Rh1AG326400 Rh1AG326500 Rh1BG287600 Rh1BG287700 Rh1CG304400 Rh1CG304500 Rh1DG319300 Rh1DG319400
rosa_wichuraiana	Rw1G028920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	638
Acc36I	ACCTGC	1 cut(s)	638
AccB1I	GGYRCC	1 cut(s)	445
AccBSI	CCGCTC	1 cut(s)	277
AccI	GTMKAC	1 cut(s)	429
AciI	CCGC	1 cut(s)	275
AclWI	GGATC	2 cut(s)	539, 869
AcoI	YGGCCR	1 cut(s)	68
AcsI	RAATTY	5 cut(s)	82, 125, 560, 686, 847
AdeI	CACNNNGTG	1 cut(s)	332
AfaI	GTAC	1 cut(s)	416
AgsI	TTSAA	8 cut(s)	13, 170, 521, 598, 671, 692, 755, 893
AluBI	AGCT	9 cut(s)	160, 173, 197, 248, 644, 737, 854, 886, 897
AluI	AGCT	9 cut(s)	160, 173, 197, 248, 644, 737, 854, 886, 897
Alw21I	GWGCWC	1 cut(s)	888
Alw26I	GTCTC	1 cut(s)	898
AlwI	GGATC	2 cut(s)	539, 869
AlwNI	CAGNNNCTG	1 cut(s)	653
AoxI	GGCC	4 cut(s)	68, 404, 524, 809
ApeKI	GCWGC	5 cut(s)	35, 641, 644, 653, 821
ApoI	RAATTY	5 cut(s)	82, 125, 560, 686, 847
ArsI	GACNNNNNNTTYG	2 cut(s)	500, 532
Asp700I	GAANNNNTTC	1 cut(s)	759
AspS9I	GGNCC	2 cut(s)	524, 698
AsuC2I	CCSGG	2 cut(s)	346, 868
AvaII	GGWCC	1 cut(s)	698
BalI	TGGCCA	1 cut(s)	70
BanI	GGYRCC	1 cut(s)	445
BanII	GRGCYC	1 cut(s)	888
Bbv12I	GWGCWC	1 cut(s)	888
BbvI	GCAGC	5 cut(s)	22, 631, 640, 653, 833
BccI	CCATC	2 cut(s)	278, 689
BceAI	ACGGC	1 cut(s)	433
BcnI	CCSGG	2 cut(s)	346, 868
BcoDI	GTCTC	1 cut(s)	898
BfmI	CTRYAG	2 cut(s)	645, 801
BfuAI	ACCTGC	1 cut(s)	638
BglI	GCCNNNNNGGC	1 cut(s)	67
BisI	GCNGC	5 cut(s)	36, 642, 645, 654, 822
BlsI	GCNGC	5 cut(s)	37, 643, 646, 655, 823
Bme1390I	CCNGG	2 cut(s)	346, 868
Bme18I	GGWCC	1 cut(s)	698
BmgT120I	GGNCC	2 cut(s)	524, 698
BmiI	GGNNCC	3 cut(s)	384, 447, 634
BmrFI	CCNGG	2 cut(s)	346, 868
BplI	GAGNNNNNCTC	2 cut(s)	186, 218
BpmI	CTGGAG	1 cut(s)	383
Bpu10I	CCTNAGC	1 cut(s)	156
BpuMI	CCSGG	2 cut(s)	346, 868
BsaJI	CCNNGG	1 cut(s)	636
BsaXI	ACNNNNNCTCC	2 cut(s)	575, 605
Bse1I	ACTGG	5 cut(s)	113, 226, 366, 780, 822
BseDI	CCNNGG	1 cut(s)	636
BseGI	GGATG	1 cut(s)	50
BseMII	CTCAG	1 cut(s)	276
BseNI	ACTGG	5 cut(s)	113, 226, 366, 780, 822
BseRI	GAGGAG	2 cut(s)	141, 848
BseXI	GCAGC	5 cut(s)	22, 631, 640, 653, 833
BshFI	GGCC	4 cut(s)	70, 406, 526, 811
BshNI	GGYRCC	1 cut(s)	445
BsiHKAI	GWGCWC	1 cut(s)	888
BsiSI	CCGG	2 cut(s)	346, 868
BslFI	GGGAC	2 cut(s)	74, 372
BsmAI	GTCTC	1 cut(s)	898
BsmBI	CGTCTC	1 cut(s)	898
BsmFI	GGGAC	2 cut(s)	74, 372
BsnI	GGCC	4 cut(s)	70, 406, 526, 811
Bsp1286I	GDGCHC	1 cut(s)	888
Bsp143I	GATC	3 cut(s)	391, 544, 874
BspACI	CCGC	1 cut(s)	275
BspANI	GGCC	4 cut(s)	70, 406, 526, 811
BspCNI	CTCAG	1 cut(s)	275
BspLI	GGNNCC	3 cut(s)	384, 447, 634
BspMAI	CTGCAG	2 cut(s)	649, 805
BspMI	ACCTGC	1 cut(s)	638
BspPI	GGATC	2 cut(s)	539, 869
BspQI	GCTCTTC	1 cut(s)	284
BspT107I	GGYRCC	1 cut(s)	445
BsrBI	CCGCTC	1 cut(s)	277
BsrI	ACTGG	5 cut(s)	113, 226, 366, 780, 822
BssECI	CCNNGG	1 cut(s)	636
BssMI	GATC	3 cut(s)	391, 544, 874
BssT1I	CCWWGG	1 cut(s)	636
Bst4CI	ACNGT	3 cut(s)	353, 512, 534
Bst6I	CTCTTC	2 cut(s)	284, 564
BstAPI	GCANNNNNTGC	2 cut(s)	332, 653
BstC8I	GCNNGC	4 cut(s)	333, 408, 805, 809
BstDEI	CTNAG	2 cut(s)	156, 262
BstF5I	GGATG	1 cut(s)	50
BstKTI	GATC	3 cut(s)	394, 547, 877
BstMAI	GTCTC	1 cut(s)	898
BstMBI	GATC	3 cut(s)	391, 544, 874
BstMWI	GCNNNNNNNGC	6 cut(s)	67, 215, 332, 403, 650, 653
BstSCI	CCNGG	2 cut(s)	344, 866
BstSFI	CTRYAG	2 cut(s)	645, 801
BstV1I	GCAGC	5 cut(s)	22, 631, 640, 653, 833
BsuRI	GGCC	4 cut(s)	70, 406, 526, 811
BtsCI	GGATG	1 cut(s)	50
BtsI	GCAGTG	2 cut(s)	30, 798
BtsIMutI	CAGTG	5 cut(s)	30, 120, 530, 773, 798
BveI	ACCTGC	1 cut(s)	638
Cac8I	GCNNGC	4 cut(s)	333, 408, 805, 809
CaiI	CAGNNNCTG	1 cut(s)	653
Cfr13I	GGNCC	2 cut(s)	524, 698
CseI	GACGC	1 cut(s)	915
Csp6I	GTAC	1 cut(s)	415
CviAII	CATG	1 cut(s)	825
CviQI	GTAC	1 cut(s)	415
DdeI	CTNAG	2 cut(s)	156, 262
DpnI	GATC	3 cut(s)	393, 546, 876
DpnII	GATC	3 cut(s)	391, 544, 874
DraI	TTTAAA	1 cut(s)	622
DraIII	CACNNNGTG	1 cut(s)	332
EaeI	YGGCCR	1 cut(s)	68
Eam1104I	CTCTTC	2 cut(s)	284, 564
EarI	CTCTTC	2 cut(s)	284, 564
Ecl136II	GAGCTC	1 cut(s)	886
Eco130I	CCWWGG	1 cut(s)	636
Eco147I	AGGCCT	2 cut(s)	406, 811
Eco24I	GRGCYC	1 cut(s)	888
Eco47I	GGWCC	1 cut(s)	698
Eco53kI	GAGCTC	1 cut(s)	886
EcoICRI	GAGCTC	1 cut(s)	886
EcoO109I	RGGNCCY	1 cut(s)	524
EcoT14I	CCWWGG	1 cut(s)	636
EcoT38I	GRGCYC	1 cut(s)	888
ErhI	CCWWGG	1 cut(s)	636
Esp3I	CGTCTC	1 cut(s)	898
FaeI	CATG	1 cut(s)	828
FalI	AAGNNNNNCTT	2 cut(s)	893, 925
FaqI	GGGAC	2 cut(s)	74, 372
FatI	CATG	1 cut(s)	824
FauNDI	CATATG	1 cut(s)	322
FblI	GTMKAC	1 cut(s)	429
Fnu4HI	GCNGC	5 cut(s)	36, 642, 645, 654, 822
FokI	GGATG	1 cut(s)	37
FriOI	GRGCYC	1 cut(s)	888
Fsp4HI	GCNGC	5 cut(s)	36, 642, 645, 654, 822
GluI	GCNGC	5 cut(s)	36, 642, 645, 654, 822
GsuI	CTGGAG	1 cut(s)	383
HaeIII	GGCC	4 cut(s)	70, 406, 526, 811
HapII	CCGG	2 cut(s)	346, 868
HgaI	GACGC	1 cut(s)	915
Hin1II	CATG	1 cut(s)	828
HindIII	AAGCTT	2 cut(s)	158, 171
HinfI	GANTC	2 cut(s)	484, 590
HpaII	CCGG	2 cut(s)	346, 868
Hpy166II	GTNNAC	1 cut(s)	430
Hpy188I	TCNGA	2 cut(s)	252, 265
Hpy188III	TCNNGA	1 cut(s)	488
Hpy8I	GTNNAC	1 cut(s)	430
Hpy99I	CGWCG	1 cut(s)	454
HpyAV	CCTTC	3 cut(s)	515, 537, 604
HpyCH4III	ACNGT	3 cut(s)	353, 512, 534
HpyCH4IV	ACGT	1 cut(s)	15
HpyCH4V	TGCA	8 cut(s)	209, 326, 397, 551, 566, 647, 656, 803
HpyF10VI	GCNNNNNNNGC	6 cut(s)	67, 215, 332, 403, 650, 653
HpyF3I	CTNAG	2 cut(s)	156, 262
HpySE526I	ACGT	1 cut(s)	15
Hsp92II	CATG	1 cut(s)	828
Kzo9I	GATC	3 cut(s)	391, 544, 874
LguI	GCTCTTC	1 cut(s)	284
LmnI	GCTCC	1 cut(s)	748
Lsp1109I	GCAGC	5 cut(s)	22, 631, 640, 653, 833
MaeII	ACGT	1 cut(s)	15
MaeIII	GTNAC	1 cut(s)	512
MalI	GATC	3 cut(s)	393, 546, 876
MbiI	CCGCTC	1 cut(s)	277
MboI	GATC	3 cut(s)	391, 544, 874
MboII	GAAGA	4 cut(s)	271, 581, 704, 796
MfeI	CAATTG	1 cut(s)	377
MhlI	GDGCHC	1 cut(s)	888
MlsI	TGGCCA	1 cut(s)	70
MluCI	AATT	6 cut(s)	82, 125, 377, 560, 686, 847
MluNI	TGGCCA	1 cut(s)	70
MlyI	GAGTC	2 cut(s)	493, 584
Mox20I	TGGCCA	1 cut(s)	70
MroXI	GAANNNNTTC	1 cut(s)	759
MscI	TGGCCA	1 cut(s)	70
MseI	TTAA	1 cut(s)	621
MslI	CAYNNNNRTG	1 cut(s)	922
Msp20I	TGGCCA	1 cut(s)	70
MspA1I	CMGCKG	1 cut(s)	644
MspI	CCGG	2 cut(s)	346, 868
MspR9I	CCNGG	2 cut(s)	346, 868
MunI	CAATTG	1 cut(s)	377
MwoI	GCNNNNNNNGC	6 cut(s)	67, 215, 332, 403, 650, 653
NciI	CCSGG	2 cut(s)	346, 868
NdeI	CATATG	1 cut(s)	322
NdeII	GATC	3 cut(s)	391, 544, 874
NlaIII	CATG	1 cut(s)	828
NlaIV	GGNNCC	3 cut(s)	384, 447, 634
NmuCI	GTSAC	1 cut(s)	512
PaqCI	CACCTGC	1 cut(s)	638
PceI	AGGCCT	2 cut(s)	406, 811
PciSI	GCTCTTC	1 cut(s)	284
PdmI	GAANNNNTTC	1 cut(s)	759
PfoI	TCCNGGA	1 cut(s)	344
PkrI	GCNGC	5 cut(s)	37, 643, 646, 655, 823
PleI	GAGTC	2 cut(s)	492, 584
PpsI	GAGTC	2 cut(s)	492, 584
Psp124BI	GAGCTC	1 cut(s)	888
PspN4I	GGNNCC	3 cut(s)	384, 447, 634
PspPI	GGNCC	2 cut(s)	524, 698
PstI	CTGCAG	2 cut(s)	649, 805
PstNI	CAGNNNCTG	1 cut(s)	653
PvuII	CAGCTG	1 cut(s)	644
RsaI	GTAC	1 cut(s)	416
RsaNI	GTAC	1 cut(s)	415
RseI	CAYNNNNRTG	1 cut(s)	922
SacI	GAGCTC	1 cut(s)	888
SapI	GCTCTTC	1 cut(s)	284
SaqAI	TTAA	1 cut(s)	621
SatI	GCNGC	5 cut(s)	36, 642, 645, 654, 822
Sau3AI	GATC	3 cut(s)	391, 544, 874
Sau96I	GGNCC	2 cut(s)	524, 698
SchI	GAGTC	2 cut(s)	493, 584
ScrFI	CCNGG	2 cut(s)	346, 868
SduI	GDGCHC	1 cut(s)	888
SfcI	CTRYAG	2 cut(s)	645, 801
SinI	GGWCC	1 cut(s)	698
SmiMI	CAYNNNNRTG	1 cut(s)	922
Sse9I	AATT	6 cut(s)	82, 125, 377, 560, 686, 847
SseBI	AGGCCT	2 cut(s)	406, 811
SsiI	CCGC	1 cut(s)	275
SstI	GAGCTC	1 cut(s)	888
StuI	AGGCCT	2 cut(s)	406, 811
StyD4I	CCNGG	2 cut(s)	344, 866
StyI	CCWWGG	1 cut(s)	636
TaaI	ACNGT	3 cut(s)	353, 512, 534
TaiI	ACGT	1 cut(s)	18
TaqI	TCGA	2 cut(s)	163, 282
TasI	AATT	6 cut(s)	82, 125, 377, 560, 686, 847
Tru1I	TTAA	1 cut(s)	621
Tru9I	TTAA	1 cut(s)	621
TscAI	CASTG	5 cut(s)	37, 120, 537, 780, 805
TseFI	GTSAC	1 cut(s)	512
TseI	GCWGC	5 cut(s)	35, 641, 644, 653, 821
Tsp45I	GTSAC	1 cut(s)	512
TspDTI	ATGAA	3 cut(s)	36, 606, 854
TspGWI	ACGGA	1 cut(s)	645
TspRI	CASTG	5 cut(s)	37, 120, 537, 780, 805
VpaK11BI	GGWCC	1 cut(s)	698
XapI	RAATTY	5 cut(s)	82, 125, 560, 686, 847
XmiI	GTMKAC	1 cut(s)	429
XmnI	GAANNNNTTC	1 cut(s)	759

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.