Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0004547

Physical Location & Seq

Genomic Coordinates Reverse (-)

43583441 .. 43585977

Gene Structure 2537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0317400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGAAAACAGACATTGAAAGCCTCTGGGTTTTCGCCCTCGCTTCGAAATGCAGAGCTCTCTCCCAAGAAAGCATTGCATGTTCTCTTCTTGTCATCGCTCTCTCATGGCTCGCCATGACTCTCTTTTACTGGGCTCATCCCGGCGGTCCGGCCTGGGGAAGAACCATCAAAAATATTATTACTAGACCAACTGCTATGATTCCCGGTCCGAGAGGTCTGCCGTTGACAGGCAGCATGAGCCTGATGACGGGTTTGGCCCACCGGAAAACCGCCGCCATGGCCGAGGCTTGCAACGCCAAGCGCCTCATGGCGTTCAGCCTGGGCCAGACTCGCGTCATCGTGACGTGTAACCCTGACGTGGCGAGAGAGATTCTCAACAGCTCCGTCTTCGCCGACCGGCCGGTGAAGGAGTCGGCCTACAGTCTGATGTTCAACCGGGCCATTGGGTTCGCCCCGTACGGAGTGTACTGGCGAACCCTGAGAAGAATCTCGGCCGCGCATCTCTTCTGTCCGAAACAAATCAAGGCCTCTGAGTCGCAACGGTCCGAGATTGCCTCCCAAATGGTGGCAATGTTCGGCGCGCACGAGCACGTTCTGTGCGTGCGCGAGGCCCTCAAGAGAGCCTCCCTCAACAACATGATGTGCTCTGTTTTTGGACGCAAATATGAGCTTGATTCGGTCAGTGACGAAGTCGAAGAGCTCAAGTCGCTAGTGGACGAAGGCTACGACTTATTGGGTAAGTTGAACTGGTCTGACCATCTTCCTTGGCTCGCGGACTTTGACACCCAAAAAATCCGGTTCAGATGCTCCGAACTTGTCCCCAAAGTAAACCGGTTCGTTACCCGGATCATTTCCGAGCACCGGGCCCGAACCGGTGACAAATCTGCCCCGGACTTCGTTGACGTCTTGCTCTCGCTCCAAGGACCCGATAAATTATCCGACTTTGATATGATTGCCGTGCTTTGGGAAATGATATTTAGAGGGACGGACACAGTGGCGGTTCTGATCGAGTGGATTCTGGCGAGGTTGGTGCTTCATCCAGAAGTTCAATCAGCGGTGCATGCTGAACTGGACAAAGTAGTTGGGCGGTCCCGACCCGTTGATGAGTCTGACGTCAATCAGATGGTGTATCTGACGGCTGTGGTGAAAGAGGTGTTGAGGTTGCACCCTCCGGGCCCACTCTTATCATGGGCTCGCTTGGCCATCACCGATACAACAATCGACGGGCGCCACGTGCCCCGGGGGACCACTGCGATGGTGAACATGTGGTCCATTTCGAGGGACCCAGATGTTTGGGCGGACCCGCTGGAATTTAAGCCGGAGAGATTTGTGGCGCAAAAGGGTGAGATGGAGTTTTCGGTTTTCGGGTCGGATCTGAGGCTCGCGCCCTTCGGGTCGGGCAGGCGGACTTGCCCAGGAAAGGCACTGGGGTTGACAACTGTCATGTACTGGGTGGCTTCACTTTTGCACGAGTACGAATGGATGCCGTCCGATCAGAAGACCGTGGACTTGTCTGAAGTGCTAAAGCTGTCTTGCGAGATGGCCAAGCCTCTGACTGTAAACGTGTGCCCAAGGCGTAGGATGAGCACAAGTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010731 GO:0016740 GO:0016765 GO:0019538 GO:0034641 GO:0036211 GO:0043170 GO:0043412 GO:0043603 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0051186 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C_2 GST_N_3

Protein Analysis

532

Amino Acids

59.65

Weight (kDa)

8.55

Isoelectric Point (pI)

33.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	68 - 503	7.1e-81	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004547)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g20610 FvH4_7g20620 FvH4_7g20620
malus_domestica	MD01G1115000.v1.1 MD07G1183000.v1.1
prunus_persica	Prupe.2G221700_v2.0.a1 Prupe.2G221700_v2.0.a1
pyrus_communis	pycom01g14390
rosa_chinensis	RchiOBHm_Chr1g0364651 RchiOBHm_Chr1g0364661
rosa_laevigata	RLG00000027469
rosa_multiflora	Rmu_sc0024218.1_g000001 Rmu_ssc0000112.1_g000036 Rmu_ssc0000112.1_g000037 Rmu_ssc0000282.1_g000016
rosa_roxburghii	Rroxscaffold_1G00029240 Rroxscaffold_4G00291770 Rroxscaffold_4G00292190 Rroxscaffold_7G00185900 Rroxscaffold_7G00191070 Rroxscaffold_7G00191090 Rroxscaffold_7G00197330
rosa_rugosa	Rorug01G0317400
rosa_samantha	Rh1AG326400 Rh1AG326500 Rh1BG287600 Rh1BG287700 Rh1CG304400 Rh1CG304500 Rh1DG319300 Rh1DG319400
rosa_wichuraiana	Rw1G028920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	906, 1116
AccB1I	GGYRCC	1 cut(s)	1227
AccB7I	CCANNNNNTGG	1 cut(s)	565
AccII	CGCG	6 cut(s)	333, 497, 581, 606, 773, 1385
AclWI	GGATC	2 cut(s)	854, 1380
AcoI	YGGCCR	5 cut(s)	279, 398, 492, 1200, 1542
AcsI	RAATTY	1 cut(s)	1310
AcuI	CTGAAG	1 cut(s)	1536
AcvI	CACGTG	1 cut(s)	1234
AcyI	GRCGYC	3 cut(s)	903, 1113, 1228
AfaI	GTAC	4 cut(s)	458, 467, 1448, 1475
AfiI	CCNNNNNNNGG	9 cut(s)	155, 227, 247, 358, 565, 861, 963, 1278, 1420
AflIII	ACRYGT	3 cut(s)	344, 1263, 1563
AgeI	ACCGGT	2 cut(s)	831, 872
AgsI	TTSAA	4 cut(s)	17, 433, 745, 1049
AjiI	CACGTC	2 cut(s)	345, 358
AjnI	CCWGG	3 cut(s)	152, 318, 1414
AloI	GAACNNNNNNTCC	2 cut(s)	1253, 1285
AluBI	AGCT	5 cut(s)	56, 381, 670, 700, 1528
AluI	AGCT	5 cut(s)	56, 381, 670, 700, 1528
Alw21I	GWGCWC	6 cut(s)	58, 591, 647, 702, 861, 1589
AlwI	GGATC	2 cut(s)	854, 1380
Ama87I	CYCGRG	1 cut(s)	1239
ApaI	GGGCCC	2 cut(s)	868, 1178
ApeKI	GCWGC	1 cut(s)	231
ApoI	RAATTY	1 cut(s)	1310
AsiGI	ACCGGT	2 cut(s)	831, 872
AspLEI	GCGC	8 cut(s)	303, 499, 581, 583, 606, 1230, 1336, 1387
AsuC2I	CCSGG	9 cut(s)	141, 204, 437, 844, 863, 890, 1173, 1240, 1241
AsuHPI	GGTGA	6 cut(s)	415, 887, 1156, 1198, 1270, 1355
AsuII	TTCGAA	1 cut(s)	44
AvaI	CYCGRG	1 cut(s)	1239
AvaII	GGWCC	9 cut(s)	146, 206, 543, 923, 1089, 1245, 1269, 1282, 1300
BaeGI	GKGCMC	4 cut(s)	868, 1178, 1239, 1571
BalI	TGGCCA	2 cut(s)	1202, 1544
BanI	GGYRCC	1 cut(s)	1227
BanII	GRGCYC	6 cut(s)	58, 136, 702, 868, 1178, 1195
BauI	CACGAG	2 cut(s)	584, 1469
BbrPI	CACGTG	1 cut(s)	1234
BbsI	GAAGAC	2 cut(s)	379, 1505
Bbv12I	GWGCWC	6 cut(s)	58, 591, 647, 702, 861, 1589
BbvI	GCAGC	1 cut(s)	243
BccI	CCATC	7 cut(s)	173, 765, 1117, 1211, 1249, 1342, 1534
BceAI	ACGGC	4 cut(s)	205, 941, 1152, 1471
BcgI	CGANNNNNNTGC	4 cut(s)	199, 233, 1012, 1046
BciT130I	CCWGG	3 cut(s)	154, 320, 1416
BcnI	CCSGG	9 cut(s)	141, 204, 437, 844, 863, 890, 1173, 1240, 1241
BfaI	CTAG	2 cut(s)	183, 710
BfmI	CTRYAG	1 cut(s)	418
BfoI	RGCGCY	2 cut(s)	304, 1231
BglI	GCCNNNNNGGC	1 cut(s)	278
BisI	GCNGC	3 cut(s)	232, 273, 495
BlsI	GCNGC	3 cut(s)	233, 274, 496
Bme18I	GGWCC	9 cut(s)	146, 206, 543, 923, 1089, 1245, 1269, 1282, 1300
BmeT110I	CYCGRG	1 cut(s)	1239
BmgBI	CACGTC	2 cut(s)	345, 358
BmiI	GGNNCC	9 cut(s)	866, 925, 1091, 1176, 1229, 1246, 1283, 1284, 1302
BmrI	ACTGGG	3 cut(s)	139, 1436, 1459
BmsI	GCATC	3 cut(s)	508, 794, 1473
BmuI	ACTGGG	3 cut(s)	139, 1436, 1459
BoxI	GACNNNNGTC	2 cut(s)	332, 1439
BpiI	GAAGAC	2 cut(s)	379, 1505
BplI	GAGNNNNNCTC	6 cut(s)	357, 389, 539, 571, 612, 644
Bpu14I	TTCGAA	1 cut(s)	44
BpuEI	CTTGAG	2 cut(s)	599, 686
BpuMI	CCSGG	9 cut(s)	141, 204, 437, 844, 863, 890, 1173, 1240, 1241
BsaAI	YACGTR	1 cut(s)	1234
BsaHI	GRCGYC	3 cut(s)	903, 1113, 1228
BsaWI	WCCGGW	4 cut(s)	261, 795, 831, 872
Bsc4I	CCNNNNNNNGG	9 cut(s)	155, 227, 247, 358, 565, 861, 963, 1278, 1420
Bse118I	RCCGGY	4 cut(s)	396, 400, 831, 872
Bse1I	ACTGG	6 cut(s)	134, 473, 752, 1074, 1431, 1454
Bse3DI	GCAATG	2 cut(s)	72, 576
BseBI	CCWGG	3 cut(s)	154, 320, 1416
BseGI	GGATG	4 cut(s)	136, 1036, 1488, 1587
BseLI	CCNNNNNNNGG	9 cut(s)	155, 227, 247, 358, 565, 861, 963, 1278, 1420
BseMI	GCAATG	2 cut(s)	72, 576
BseMII	CTCAG	3 cut(s)	470, 522, 1367
BseNI	ACTGG	6 cut(s)	134, 473, 752, 1074, 1431, 1454
BsePI	GCGCGC	1 cut(s)	579
BseSI	GKGCMC	4 cut(s)	868, 1178, 1239, 1571
BseX3I	CGGCCG	2 cut(s)	398, 492
BseXI	GCAGC	1 cut(s)	243
Bsh1236I	CGCG	6 cut(s)	333, 497, 581, 606, 773, 1385
Bsh1285I	CGRYCG	3 cut(s)	397, 401, 495
BshNI	GGYRCC	1 cut(s)	1227
BshTI	ACCGGT	2 cut(s)	831, 872
BsiEI	CGRYCG	3 cut(s)	397, 401, 495
BsiHKAI	GWGCWC	6 cut(s)	58, 591, 647, 702, 861, 1589
BsiHKCI	CYCGRG	1 cut(s)	1239
BsiWI	CGTACG	1 cut(s)	456
BslFI	GGGAC	5 cut(s)	803, 997, 1075, 1258, 1295
BslI	CCNNNNNNNGG	9 cut(s)	155, 227, 247, 358, 565, 861, 963, 1278, 1420
BsmFI	GGGAC	5 cut(s)	803, 997, 1075, 1258, 1295
BsoBI	CYCGRG	1 cut(s)	1239
Bsp119I	TTCGAA	1 cut(s)	44
Bsp120I	GGGCCC	2 cut(s)	864, 1174
Bsp143I	GATC	4 cut(s)	846, 1005, 1372, 1492
Bsp19I	CCATGG	1 cut(s)	276
BspCNI	CTCAG	3 cut(s)	471, 523, 1368
BspFNI	CGCG	6 cut(s)	333, 497, 581, 606, 773, 1385
BspLI	GGNNCC	9 cut(s)	866, 925, 1091, 1176, 1229, 1246, 1283, 1284, 1302
BspPI	GGATC	2 cut(s)	854, 1380
BspQI	GCTCTTC	1 cut(s)	690
BspT104I	TTCGAA	1 cut(s)	44
BspT107I	GGYRCC	1 cut(s)	1227
BsrDI	GCAATG	2 cut(s)	72, 576
BsrFI	RCCGGY	4 cut(s)	396, 400, 831, 872
BsrI	ACTGG	6 cut(s)	134, 473, 752, 1074, 1431, 1454
BssAI	RCCGGY	4 cut(s)	396, 400, 831, 872
BssHII	GCGCGC	1 cut(s)	579
BssMI	GATC	4 cut(s)	846, 1005, 1372, 1492
BssNI	GRCGYC	3 cut(s)	903, 1113, 1228
BssSI	CACGAG	2 cut(s)	584, 1469
BssT1I	CCWWGG	4 cut(s)	276, 764, 919, 1571
Bst2BI	CACGAG	2 cut(s)	584, 1469
Bst2UI	CCWGG	3 cut(s)	154, 320, 1416
Bst4CI	ACNGT	6 cut(s)	422, 543, 994, 1441, 1504, 1558
Bst6I	CTCTTC	3 cut(s)	90, 509, 690
BstACI	GRCGYC	3 cut(s)	903, 1113, 1228
BstBAI	YACGTR	1 cut(s)	1234
BstBI	TTCGAA	1 cut(s)	44
BstC8I	GCNNGC	9 cut(s)	111, 289, 581, 602, 771, 1062, 1195, 1383, 1403
BstDEI	CTNAG	3 cut(s)	479, 531, 1376
BstDSI	CCRYGG	2 cut(s)	276, 1503
BstF5I	GGATG	4 cut(s)	136, 1036, 1488, 1587
BstFNI	CGCG	6 cut(s)	333, 497, 581, 606, 773, 1385
BstH2I	RGCGCY	2 cut(s)	304, 1231
BstHHI	GCGC	8 cut(s)	303, 499, 581, 583, 606, 1230, 1336, 1387
BstKTI	GATC	4 cut(s)	849, 1008, 1375, 1495
BstMBI	GATC	4 cut(s)	846, 1005, 1372, 1492
BstMCI	CGRYCG	3 cut(s)	397, 401, 495
BstMWI	GCNNNNNNNGC	8 cut(s)	237, 278, 293, 330, 706, 1061, 1199, 1234
BstNI	CCWGG	3 cut(s)	154, 320, 1416
BstNSI	RCATGY	3 cut(s)	81, 1064, 1267
BstPAI	GACNNNNGTC	2 cut(s)	332, 1439
BstSFI	CTRYAG	1 cut(s)	418
BstSLI	GKGCMC	4 cut(s)	868, 1178, 1239, 1571
BstUI	CGCG	6 cut(s)	333, 497, 581, 606, 773, 1385
BstV1I	GCAGC	1 cut(s)	243
BstV2I	GAAGAC	2 cut(s)	379, 1505
BstX2I	RGATCY	1 cut(s)	1372
BstXI	CCANNNNNNTGG	2 cut(s)	1255, 1293
BstYI	RGATCY	1 cut(s)	1372
BstZI	CGGCCG	2 cut(s)	398, 492
BtgI	CCRYGG	2 cut(s)	276, 1503
BtgZI	GCGATG	2 cut(s)	79, 1268
BtrI	CACGTC	2 cut(s)	345, 358
BtsCI	GGATG	4 cut(s)	136, 1036, 1488, 1587
BtsI	GCAGTG	1 cut(s)	1248
BtsIMutI	CAGTG	4 cut(s)	688, 999, 1248, 1424
Cac8I	GCNNGC	9 cut(s)	111, 289, 581, 602, 771, 1062, 1195, 1383, 1403
CfoI	GCGC	8 cut(s)	303, 499, 581, 583, 606, 1230, 1336, 1387
Cfr10I	RCCGGY	4 cut(s)	396, 400, 831, 872
Cfr9I	CCCGGG	1 cut(s)	1239
CpoI	CGGWCCG	3 cut(s)	146, 206, 543
CseI	GACGC	2 cut(s)	322, 666
Csp6I	GTAC	4 cut(s)	457, 466, 1447, 1474
CspAI	ACCGGT	2 cut(s)	831, 872
CspI	CGGWCCG	3 cut(s)	146, 206, 543
CviQI	GTAC	4 cut(s)	457, 466, 1447, 1474
DdeI	CTNAG	3 cut(s)	479, 531, 1376
DinI	GGCGCC	1 cut(s)	1229
DpnI	GATC	4 cut(s)	848, 1007, 1374, 1494
DpnII	GATC	4 cut(s)	846, 1005, 1372, 1492
EaeI	YGGCCR	5 cut(s)	279, 398, 492, 1200, 1542
EagI	CGGCCG	2 cut(s)	398, 492
Eam1104I	CTCTTC	3 cut(s)	90, 509, 690
EarI	CTCTTC	3 cut(s)	90, 509, 690
EciI	GGCGGA	2 cut(s)	1313, 1420
Ecl136II	GAGCTC	2 cut(s)	56, 700
EclXI	CGGCCG	2 cut(s)	398, 492
Eco130I	CCWWGG	4 cut(s)	276, 764, 919, 1571
Eco147I	AGGCCT	1 cut(s)	527
Eco24I	GRGCYC	6 cut(s)	58, 136, 702, 868, 1178, 1195
Eco47I	GGWCC	9 cut(s)	146, 206, 543, 923, 1089, 1245, 1269, 1282, 1300
Eco52I	CGGCCG	2 cut(s)	398, 492
Eco53kI	GAGCTC	2 cut(s)	56, 700
Eco57I	CTGAAG	1 cut(s)	1536
Eco72I	CACGTG	1 cut(s)	1234
Eco88I	CYCGRG	1 cut(s)	1239
EcoICRI	GAGCTC	2 cut(s)	56, 700
EcoO109I	RGGNCCY	3 cut(s)	610, 923, 1282
EcoRII	CCWGG	3 cut(s)	152, 318, 1414
EcoT14I	CCWWGG	4 cut(s)	276, 764, 919, 1571
EcoT38I	GRGCYC	6 cut(s)	58, 136, 702, 868, 1178, 1195
EgeI	GGCGCC	1 cut(s)	1229
EheI	GGCGCC	1 cut(s)	1229
ErhI	CCWWGG	4 cut(s)	276, 764, 919, 1571
FaqI	GGGAC	5 cut(s)	803, 997, 1075, 1258, 1295
FauI	CCCGC	1 cut(s)	1311
Fnu4HI	GCNGC	3 cut(s)	232, 273, 495
FokI	GGATG	4 cut(s)	123, 1023, 1495, 1594
FriOI	GRGCYC	6 cut(s)	58, 136, 702, 868, 1178, 1195
Fsp4HI	GCNGC	3 cut(s)	232, 273, 495
FspBI	CTAG	2 cut(s)	183, 710
GlaI	GCGC	8 cut(s)	302, 498, 580, 582, 605, 1229, 1335, 1386
GluI	GCNGC	3 cut(s)	232, 273, 495
HaeII	RGCGCY	2 cut(s)	304, 1231
HgaI	GACGC	2 cut(s)	322, 666
HhaI	GCGC	8 cut(s)	303, 499, 581, 583, 606, 1230, 1336, 1387
Hin1I	GRCGYC	3 cut(s)	903, 1113, 1228
Hin6I	GCGC	8 cut(s)	301, 497, 579, 581, 604, 1228, 1334, 1385
HinP1I	GCGC	8 cut(s)	301, 497, 579, 581, 604, 1228, 1334, 1385
HincII	GTYRAC	3 cut(s)	225, 901, 1434
HindII	GTYRAC	3 cut(s)	225, 901, 1434
HphI	GGTGA	6 cut(s)	415, 887, 1156, 1198, 1270, 1355
Hpy166II	GTNNAC	9 cut(s)	225, 466, 715, 829, 901, 1261, 1434, 1507, 1561
Hpy188III	TCNNGA	4 cut(s)	340, 616, 1040, 1092
Hpy8I	GTNNAC	9 cut(s)	225, 466, 715, 829, 901, 1261, 1434, 1507, 1561
Hpy99I	CGWCG	1 cut(s)	1226
HpyAV	CCTTC	3 cut(s)	400, 713, 1399
HpyCH4III	ACNGT	6 cut(s)	422, 543, 994, 1441, 1504, 1558
HpyCH4IV	ACGT	7 cut(s)	344, 357, 591, 903, 1113, 1233, 1563
HpyCH4V	TGCA	6 cut(s)	51, 77, 291, 1060, 1165, 1468
HpyF10VI	GCNNNNNNNGC	8 cut(s)	237, 278, 293, 330, 706, 1061, 1199, 1234
HpyF3I	CTNAG	3 cut(s)	479, 531, 1376
HpySE526I	ACGT	7 cut(s)	344, 357, 591, 903, 1113, 1233, 1563
Hsp92I	GRCGYC	3 cut(s)	903, 1113, 1228
HspAI	GCGC	8 cut(s)	301, 497, 579, 581, 604, 1228, 1334, 1385
KasI	GGCGCC	1 cut(s)	1227
KflI	GGGWCCC	1 cut(s)	1282
Kzo9I	GATC	4 cut(s)	846, 1005, 1372, 1492
LguI	GCTCTTC	1 cut(s)	690
LmnI	GCTCC	3 cut(s)	386, 812, 921
Lsp1109I	GCAGC	1 cut(s)	243
LweI	GCATC	3 cut(s)	508, 794, 1473
MaeI	CTAG	2 cut(s)	183, 710
MaeII	ACGT	7 cut(s)	344, 357, 591, 903, 1113, 1233, 1563
MaeIII	GTNAC	5 cut(s)	340, 347, 683, 838, 875
MalI	GATC	4 cut(s)	848, 1007, 1374, 1494
MboI	GATC	4 cut(s)	846, 1005, 1372, 1492
MboII	GAAGA	8 cut(s)	77, 171, 379, 495, 496, 707, 752, 1510
MflI	RGATCY	1 cut(s)	1372
MlsI	TGGCCA	2 cut(s)	1202, 1544
MluCI	AATT	2 cut(s)	932, 1310
MluNI	TGGCCA	2 cut(s)	1202, 1544
Mly113I	GGCGCC	1 cut(s)	1228
MlyI	GAGTC	5 cut(s)	112, 322, 419, 542, 1115
MmeI	TCCRAC	2 cut(s)	963, 1350
Mox20I	TGGCCA	2 cut(s)	1202, 1544
MscI	TGGCCA	2 cut(s)	1202, 1544
MseI	TTAA	1 cut(s)	1314
MslI	CAYNNNNRTG	1 cut(s)	1253
Msp20I	TGGCCA	2 cut(s)	1202, 1544
MspA1I	CMGCKG	2 cut(s)	1055, 1306
MvaI	CCWGG	3 cut(s)	154, 320, 1416
MvnI	CGCG	6 cut(s)	333, 497, 581, 606, 773, 1385
MwoI	GCNNNNNNNGC	8 cut(s)	237, 278, 293, 330, 706, 1061, 1199, 1234
NarI	GGCGCC	1 cut(s)	1228
NciI	CCSGG	9 cut(s)	141, 204, 437, 844, 863, 890, 1173, 1240, 1241
NcoI	CCATGG	1 cut(s)	276
NdeII	GATC	4 cut(s)	846, 1005, 1372, 1492
NlaIV	GGNNCC	9 cut(s)	866, 925, 1091, 1176, 1229, 1246, 1283, 1284, 1302
NmeAIII	GCCGAG	2 cut(s)	307, 470
NmuCI	GTSAC	3 cut(s)	340, 683, 875
NspI	RCATGY	3 cut(s)	81, 1064, 1267
NspV	TTCGAA	1 cut(s)	44
PaeI	GCATGC	1 cut(s)	1064
PauI	GCGCGC	1 cut(s)	579
PceI	AGGCCT	1 cut(s)	527
PciI	ACATGT	1 cut(s)	1263
PciSI	GCTCTTC	1 cut(s)	690
PcsI	WCGNNNNNNNCGW	4 cut(s)	582, 597, 723, 1230
PfeI	GAWTC	5 cut(s)	199, 370, 486, 674, 1015
Pfl23II	CGTACG	1 cut(s)	456
PflFI	GACNNNGTC	1 cut(s)	689
PflMI	CCANNNNNTGG	1 cut(s)	565
PinAI	ACCGGT	2 cut(s)	831, 872
PkrI	GCNGC	3 cut(s)	233, 274, 496
PleI	GAGTC	5 cut(s)	112, 322, 418, 541, 1114
PluTI	GGCGCC	1 cut(s)	1231
PmaCI	CACGTG	1 cut(s)	1234
PmlI	CACGTG	1 cut(s)	1234
PpsI	GAGTC	5 cut(s)	112, 322, 418, 541, 1114
Ppu21I	YACGTR	1 cut(s)	1234
PpuMI	RGGWCCY	2 cut(s)	923, 1282
PscI	ACATGT	1 cut(s)	1263
PshAI	GACNNNNGTC	2 cut(s)	332, 1439
Psp124BI	GAGCTC	2 cut(s)	58, 702
Psp5II	RGGWCCY	2 cut(s)	923, 1282
Psp6I	CCWGG	3 cut(s)	152, 318, 1414
PspCI	CACGTG	1 cut(s)	1234
PspGI	CCWGG	3 cut(s)	152, 318, 1414
PspLI	CGTACG	1 cut(s)	456
PspN4I	GGNNCC	9 cut(s)	866, 925, 1091, 1176, 1229, 1246, 1283, 1284, 1302
PspOMI	GGGCCC	2 cut(s)	864, 1174
PspPPI	RGGWCCY	2 cut(s)	923, 1282
PsuI	RGATCY	1 cut(s)	1372
PsyI	GACNNNGTC	1 cut(s)	689
PteI	GCGCGC	1 cut(s)	579
RsaI	GTAC	4 cut(s)	458, 467, 1448, 1475
RsaNI	GTAC	4 cut(s)	457, 466, 1447, 1474
RseI	CAYNNNNRTG	1 cut(s)	1253
Rsr2I	CGGWCCG	3 cut(s)	146, 206, 543
RsrII	CGGWCCG	3 cut(s)	146, 206, 543
SacI	GAGCTC	2 cut(s)	58, 702
SapI	GCTCTTC	1 cut(s)	690
SaqAI	TTAA	1 cut(s)	1314
SatI	GCNGC	3 cut(s)	232, 273, 495
Sau3AI	GATC	4 cut(s)	846, 1005, 1372, 1492
SchI	GAGTC	5 cut(s)	112, 322, 419, 542, 1115
SfaNI	GCATC	3 cut(s)	508, 794, 1473
SfcI	CTRYAG	1 cut(s)	418
SfoI	GGCGCC	1 cut(s)	1229
SfuI	TTCGAA	1 cut(s)	44
SinI	GGWCC	9 cut(s)	146, 206, 543, 923, 1089, 1245, 1269, 1282, 1300
SmaI	CCCGGG	1 cut(s)	1241
SmiMI	CAYNNNNRTG	1 cut(s)	1253
SmlI	CTYRAG	2 cut(s)	614, 701
SmoI	CTYRAG	2 cut(s)	614, 701
SphI	GCATGC	1 cut(s)	1064
Sse9I	AATT	2 cut(s)	932, 1310
SseBI	AGGCCT	1 cut(s)	527
SspDI	GGCGCC	1 cut(s)	1227
SspI	AATATT	1 cut(s)	175
SspMI	CTAG	2 cut(s)	183, 710
SstI	GAGCTC	2 cut(s)	58, 702
StuI	AGGCCT	1 cut(s)	527
StyI	CCWWGG	4 cut(s)	276, 764, 919, 1571
TaaI	ACNGT	6 cut(s)	422, 543, 994, 1441, 1504, 1558
TaiI	ACGT	7 cut(s)	347, 360, 594, 906, 1116, 1236, 1566
TaqI	TCGA	5 cut(s)	44, 693, 1008, 1221, 1277
TaqII	GACCGA	1 cut(s)	667
TasI	AATT	2 cut(s)	932, 1310
TatI	WGTACW	2 cut(s)	465, 1446
TauI	GCSGC	2 cut(s)	275, 497
TfiI	GAWTC	5 cut(s)	199, 370, 486, 674, 1015
Tru1I	TTAA	1 cut(s)	1314
Tru9I	TTAA	1 cut(s)	1314
TscAI	CASTG	4 cut(s)	688, 999, 1255, 1431
TseFI	GTSAC	3 cut(s)	340, 683, 875
TseI	GCWGC	1 cut(s)	231
Tsp45I	GTSAC	3 cut(s)	340, 683, 875
TspDTI	ATGAA	2 cut(s)	17, 1025
TspGWI	ACGGA	3 cut(s)	373, 474, 1001
TspMI	CCCGGG	1 cut(s)	1239
TspRI	CASTG	4 cut(s)	688, 999, 1255, 1431
Tth111I	GACNNNGTC	1 cut(s)	689
Van91I	CCANNNNNTGG	1 cut(s)	565
VpaK11BI	GGWCC	9 cut(s)	146, 206, 543, 923, 1089, 1245, 1269, 1282, 1300
XapI	RAATTY	1 cut(s)	1310
XceI	RCATGY	3 cut(s)	81, 1064, 1267
XcmI	CCANNNNNNNNNTGG	2 cut(s)	304, 1185
XmaI	CCCGGG	1 cut(s)	1239
XspI	CTAG	2 cut(s)	183, 710
ZraI	GACGTC	2 cut(s)	904, 1114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.