Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0008278

Physical Location & Seq

Genomic Coordinates Forward (+)

26036628 .. 26038418

Gene Structure 1791 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G240700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 762 bp

ATGGCTTTCACTTCAATTCTTCGCAGATCGGCCTCCTCTTTGGCTCCATTGGCCAGCCGACTGGCTCGGGGCAATCGATCTTACCATGGTGCTCTCGTCAACGCCATAAACCACGTCAATCACTCCTACAAGTCCACTCTGACCCCTTTTGTTCCGACCCCTCGCTATTATTCCAGCCACAGTTCGGACCAGTCTCTTCTCAAGGTTATCGATGCAGAGATAAAGTGCGCTGAGGAGACCGATGATCTTGACAAGGCTGAAGAGATTCCAAGTGGCTTCCCTTTTCAAATTGAAGATACTCCCGGAGCCCAAATAGTGACACTGAAAAGAACATATCAGGGTGAAAACATAGTAGTTGAAGTTCACATGCCTGATCTAGTTACTGGTGATGAAGAAAATGACGGTGACCAGGATGGTGATGATGAGGATGGAAGTGCTAATAAGTCCAGCCTCCCGTTGCTCGTAACTGTCTCCAAGAGTGATGGACCTTCTCTTGAGTTCAGCTGCACTGCTTTTGCTGATGAGATTGAAATTGACAGCTTGGCAGTGAAAAATCCAGAGAATTCGGAGGATCAGATTGCCTATGAGGGGCCTGACTTCCATGATTTGGATGAGAACCTTCAGAAGGCATTCCACAAGTATTTGGAGATTAGAGGAATCAAGCCCAGCACAACCAATTTCTTGCATGAGTACATGATCAACAAAGACACTAGAGAATATGCGAATTGGTTGCAGAAACTTAAGCAGTTCGTTGCAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko05168 map05168

Pfam Domains

Protein Families

MAM33

Protein Analysis

254

Amino Acids

28.16

Weight (kDa)

4.66

Isoelectric Point (pI)

51.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008278)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39790 AT2G39795 AT2G46190 AT3G55605 AT5G05990
fragaria_vesca	FvH4_7g23410
malus_domestica	MD00G1150700.v1.1 MD01G1140100.v1.1 MD07G1204400.v1.1 MD12G1094400.v1.1
prunus_persica	Prupe.2G240700_v2.0.a1
pyrus_communis	pycom01g16060 pycom07g19100
rosa_chinensis	RchiOBHm_Chr1g0368531
rosa_laevigata	RLG00000027205
rosa_multiflora	Rmu_sc0011394.1_g000008 Rmu_sc0035758.1_g000001
rosa_roxburghii	Rroxscaffold_4G00288460
rosa_rugosa	Rorug01G0342700
rosa_samantha	Rh1AG350000 Rh1BG313200 Rh1CG327900 Rh1DG344600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	607
AclWI	GGATC	1 cut(s)	579
AcoI	YGGCCR	1 cut(s)	51
AcsI	RAATTY	1 cut(s)	562
AcuI	CTGAAG	2 cut(s)	279, 605
AfaI	GTAC	1 cut(s)	692
AfiI	CCNNNNNNNGG	4 cut(s)	184, 588, 607, 625
AflII	CTTAAG	1 cut(s)	740
AgsI	TTSAA	5 cut(s)	15, 287, 293, 359, 530
AjiI	CACGTC	1 cut(s)	115
AjnI	CCWGG	1 cut(s)	408
AluBI	AGCT	3 cut(s)	504, 540, 758
AluI	AGCT	3 cut(s)	504, 540, 758
Alw21I	GWGCWC	1 cut(s)	94
Alw26I	GTCTC	3 cut(s)	198, 230, 475
AlwI	GGATC	1 cut(s)	579
Ama87I	CYCGRG	1 cut(s)	66
AoxI	GGCC	3 cut(s)	30, 51, 590
ApeKI	GCWGC	2 cut(s)	504, 755
ApoI	RAATTY	1 cut(s)	562
Asp700I	GAANNNNTTC	2 cut(s)	264, 629
AspLEI	GCGC	1 cut(s)	230
AspS9I	GGNCC	3 cut(s)	187, 485, 590
AsuC2I	CCSGG	1 cut(s)	303
AsuHPI	GGTGA	4 cut(s)	353, 398, 416, 428
AvaI	CYCGRG	1 cut(s)	66
AvaII	GGWCC	2 cut(s)	187, 485
BalI	TGGCCA	1 cut(s)	53
BanII	GRGCYC	1 cut(s)	310
Bbv12I	GWGCWC	1 cut(s)	94
BbvCI	CCTCAGC	1 cut(s)	231
BbvI	GCAGC	1 cut(s)	491
BccI	CCATC	3 cut(s)	407, 422, 476
BcgI	CGANNNNNNTGC	2 cut(s)	712, 746
BciT130I	CCWGG	1 cut(s)	410
BclI	TGATCA	1 cut(s)	696
BcnI	CCSGG	1 cut(s)	303
BcoDI	GTCTC	3 cut(s)	198, 230, 475
BfaI	CTAG	2 cut(s)	377, 711
BfrI	CTTAAG	1 cut(s)	740
BisI	GCNGC	2 cut(s)	505, 756
BlsI	GCNGC	2 cut(s)	506, 757
Bme1390I	CCNGG	2 cut(s)	303, 410
Bme18I	GGWCC	2 cut(s)	187, 485
BmeT110I	CYCGRG	1 cut(s)	66
BmgBI	CACGTC	1 cut(s)	115
BmgT120I	GGNCC	3 cut(s)	187, 485, 590
BmiI	GGNNCC	3 cut(s)	45, 307, 591
BmrFI	CCNGG	2 cut(s)	303, 410
BmsI	GCATC	1 cut(s)	202
Bpu10I	CCTNAGC	1 cut(s)	231
BpuEI	CTTGAG	2 cut(s)	185, 515
BpuMI	CCSGG	1 cut(s)	303
Bsa29I	ATCGAT	2 cut(s)	76, 210
BsaI	GGTCTC	1 cut(s)	230
BsaJI	CCNNGG	1 cut(s)	85
Bsc4I	CCNNNNNNNGG	4 cut(s)	184, 588, 607, 625
Bse1I	ACTGG	3 cut(s)	66, 190, 388
BseBI	CCWGG	1 cut(s)	410
BseCI	ATCGAT	2 cut(s)	76, 210
BseDI	CCNNGG	1 cut(s)	85
BseGI	GGATG	3 cut(s)	418, 433, 616
BseLI	CCNNNNNNNGG	4 cut(s)	184, 588, 607, 625
BseMII	CTCAG	1 cut(s)	222
BseNI	ACTGG	3 cut(s)	66, 190, 388
BseRI	GAGGAG	2 cut(s)	25, 248
BseXI	GCAGC	1 cut(s)	491
BseYI	CCCAGC	1 cut(s)	665
BsgI	GTGCAG	1 cut(s)	490
BshFI	GGCC	3 cut(s)	32, 53, 592
BshVI	ATCGAT	2 cut(s)	76, 210
BsiHKAI	GWGCWC	1 cut(s)	94
BsiHKCI	CYCGRG	1 cut(s)	66
BsiSI	CCGG	1 cut(s)	303
BslI	CCNNNNNNNGG	4 cut(s)	184, 588, 607, 625
BsmAI	GTCTC	3 cut(s)	198, 230, 475
BsmI	GAATGC	1 cut(s)	629
BsnI	GGCC	3 cut(s)	32, 53, 592
Bso31I	GGTCTC	1 cut(s)	230
BsoBI	CYCGRG	1 cut(s)	66
Bsp1286I	GDGCHC	2 cut(s)	94, 310
Bsp143I	GATC	6 cut(s)	26, 77, 244, 373, 571, 696
Bsp19I	CCATGG	1 cut(s)	85
BspANI	GGCC	3 cut(s)	32, 53, 592
BspCNI	CTCAG	1 cut(s)	223
BspDI	ATCGAT	2 cut(s)	76, 210
BspLI	GGNNCC	3 cut(s)	45, 307, 591
BspPI	GGATC	1 cut(s)	579
BspTI	CTTAAG	1 cut(s)	740
BspTNI	GGTCTC	1 cut(s)	230
BsrI	ACTGG	3 cut(s)	66, 190, 388
BssECI	CCNNGG	1 cut(s)	85
BssMI	GATC	6 cut(s)	26, 77, 244, 373, 571, 696
BssT1I	CCWWGG	1 cut(s)	85
Bst2UI	CCWGG	1 cut(s)	410
Bst4CI	ACNGT	3 cut(s)	182, 404, 469
Bst6I	CTCTTC	2 cut(s)	201, 255
BstAFI	CTTAAG	1 cut(s)	740
BstC8I	GCNNGC	1 cut(s)	55
BstDEI	CTNAG	1 cut(s)	231
BstDSI	CCRYGG	1 cut(s)	85
BstEII	GGTNACC	1 cut(s)	404
BstENI	CCTNNNNNAGG	1 cut(s)	623
BstF5I	GGATG	3 cut(s)	418, 433, 616
BstHHI	GCGC	1 cut(s)	230
BstKTI	GATC	6 cut(s)	29, 80, 247, 376, 574, 699
BstMAI	GTCTC	3 cut(s)	198, 230, 475
BstMBI	GATC	6 cut(s)	26, 77, 244, 373, 571, 696
BstMWI	GCNNNNNNNGC	1 cut(s)	50
BstNI	CCWGG	1 cut(s)	410
BstNSI	RCATGY	1 cut(s)	370
BstPI	GGTNACC	1 cut(s)	404
BstSCI	CCNGG	2 cut(s)	301, 408
BstV1I	GCAGC	1 cut(s)	491
BstXI	CCANNNNNNTGG	1 cut(s)	61
Bsu15I	ATCGAT	2 cut(s)	76, 210
BsuRI	GGCC	3 cut(s)	32, 53, 592
BsuTUI	ATCGAT	2 cut(s)	76, 210
BtgI	CCRYGG	1 cut(s)	85
BtrI	CACGTC	1 cut(s)	115
BtsCI	GGATG	3 cut(s)	418, 433, 616
BtsI	GCAGTG	2 cut(s)	507, 552
BtsIMutI	CAGTG	3 cut(s)	320, 507, 552
Cac8I	GCNNGC	1 cut(s)	55
CfoI	GCGC	1 cut(s)	230
Cfr13I	GGNCC	3 cut(s)	187, 485, 590
ClaI	ATCGAT	2 cut(s)	76, 210
Csp6I	GTAC	1 cut(s)	691
CviAII	CATG	5 cut(s)	86, 367, 602, 686, 694
CviQI	GTAC	1 cut(s)	691
DdeI	CTNAG	1 cut(s)	231
DpnI	GATC	6 cut(s)	28, 79, 246, 375, 573, 698
DpnII	GATC	6 cut(s)	26, 77, 244, 373, 571, 696
EaeI	YGGCCR	1 cut(s)	51
Eam1104I	CTCTTC	2 cut(s)	201, 255
EarI	CTCTTC	2 cut(s)	201, 255
Eco130I	CCWWGG	1 cut(s)	85
Eco24I	GRGCYC	1 cut(s)	310
Eco31I	GGTCTC	1 cut(s)	230
Eco47I	GGWCC	2 cut(s)	187, 485
Eco57I	CTGAAG	2 cut(s)	279, 605
Eco88I	CYCGRG	1 cut(s)	66
Eco91I	GGTNACC	1 cut(s)	404
EcoNI	CCTNNNNNAGG	1 cut(s)	623
EcoO109I	RGGNCCY	1 cut(s)	590
EcoO65I	GGTNACC	1 cut(s)	404
EcoRI	GAATTC	1 cut(s)	562
EcoRII	CCWGG	1 cut(s)	408
EcoT14I	CCWWGG	1 cut(s)	85
EcoT38I	GRGCYC	1 cut(s)	310
ErhI	CCWWGG	1 cut(s)	85
FaeI	CATG	5 cut(s)	89, 370, 605, 689, 697
FatI	CATG	5 cut(s)	85, 366, 601, 685, 693
FbaI	TGATCA	1 cut(s)	696
Fnu4HI	GCNGC	2 cut(s)	505, 756
FokI	GGATG	3 cut(s)	425, 440, 623
FriOI	GRGCYC	1 cut(s)	310
Fsp4HI	GCNGC	2 cut(s)	505, 756
FspBI	CTAG	2 cut(s)	377, 711
GlaI	GCGC	1 cut(s)	229
GluI	GCNGC	2 cut(s)	505, 756
GsaI	CCCAGC	1 cut(s)	669
HaeIII	GGCC	3 cut(s)	32, 53, 592
HapII	CCGG	1 cut(s)	303
HhaI	GCGC	1 cut(s)	230
Hin1II	CATG	5 cut(s)	89, 370, 605, 689, 697
Hin6I	GCGC	1 cut(s)	228
HinP1I	GCGC	1 cut(s)	228
HincII	GTYRAC	1 cut(s)	100
HindII	GTYRAC	1 cut(s)	100
HinfI	GANTC	2 cut(s)	265, 657
HpaII	CCGG	1 cut(s)	303
HphI	GGTGA	4 cut(s)	353, 398, 416, 428
Hpy166II	GTNNAC	3 cut(s)	100, 135, 364
Hpy188I	TCNGA	6 cut(s)	141, 156, 187, 568, 576, 624
Hpy188III	TCNNGA	3 cut(s)	248, 494, 557
Hpy8I	GTNNAC	3 cut(s)	100, 135, 364
HpyAV	CCTTC	3 cut(s)	498, 619, 629
HpyCH4III	ACNGT	3 cut(s)	182, 404, 469
HpyCH4IV	ACGT	1 cut(s)	114
HpyCH4V	TGCA	5 cut(s)	215, 507, 685, 733, 755
HpyF10VI	GCNNNNNNNGC	1 cut(s)	50
HpyF3I	CTNAG	1 cut(s)	231
HpySE526I	ACGT	1 cut(s)	114
Hsp92II	CATG	5 cut(s)	89, 370, 605, 689, 697
HspAI	GCGC	1 cut(s)	228
Ksp22I	TGATCA	1 cut(s)	696
Kzo9I	GATC	6 cut(s)	26, 77, 244, 373, 571, 696
LmnI	GCTCC	2 cut(s)	49, 305
Lsp1109I	GCAGC	1 cut(s)	491
LweI	GCATC	1 cut(s)	202
MaeI	CTAG	2 cut(s)	377, 711
MaeII	ACGT	1 cut(s)	114
MaeIII	GTNAC	4 cut(s)	316, 379, 404, 463
MalI	GATC	6 cut(s)	28, 79, 246, 375, 573, 698
MboI	GATC	6 cut(s)	26, 77, 244, 373, 571, 696
MboII	GAAGA	5 cut(s)	11, 188, 272, 305, 404
MhlI	GDGCHC	2 cut(s)	94, 310
MlsI	TGGCCA	1 cut(s)	53
MluCI	AATT	6 cut(s)	15, 288, 531, 562, 676, 724
MluNI	TGGCCA	1 cut(s)	53
MmeI	TCCRAC	1 cut(s)	179
MnlI	CCTC	9 cut(s)	43, 46, 171, 226, 418, 461, 562, 580, 647
Mox20I	TGGCCA	1 cut(s)	53
MroXI	GAANNNNTTC	2 cut(s)	264, 629
MscI	TGGCCA	1 cut(s)	53
MseI	TTAA	2 cut(s)	741, 760
Msp20I	TGGCCA	1 cut(s)	53
MspA1I	CMGCKG	1 cut(s)	504
MspCI	CTTAAG	1 cut(s)	740
MspI	CCGG	1 cut(s)	303
MspR9I	CCNGG	2 cut(s)	303, 410
Mva1269I	GAATGC	1 cut(s)	629
MvaI	CCWGG	1 cut(s)	410
MwoI	GCNNNNNNNGC	1 cut(s)	50
NciI	CCSGG	1 cut(s)	303
NcoI	CCATGG	1 cut(s)	85
NdeII	GATC	6 cut(s)	26, 77, 244, 373, 571, 696
NlaIII	CATG	5 cut(s)	89, 370, 605, 689, 697
NlaIV	GGNNCC	3 cut(s)	45, 307, 591
NmuCI	GTSAC	2 cut(s)	316, 404
NspI	RCATGY	1 cut(s)	370
PcsI	WCGNNNNNNNCGW	1 cut(s)	73
PctI	GAATGC	1 cut(s)	629
PdmI	GAANNNNTTC	2 cut(s)	264, 629
PfeI	GAWTC	2 cut(s)	265, 657
PflMI	CCANNNNNTGG	1 cut(s)	607
PfoI	TCCNGGA	1 cut(s)	301
PkrI	GCNGC	2 cut(s)	506, 757
Psp6I	CCWGG	1 cut(s)	408
PspEI	GGTNACC	1 cut(s)	404
PspFI	CCCAGC	1 cut(s)	665
PspGI	CCWGG	1 cut(s)	408
PspN4I	GGNNCC	3 cut(s)	45, 307, 591
PspPI	GGNCC	3 cut(s)	187, 485, 590
PsrI	GAACNNNNNNTAC	2 cut(s)	345, 377
PvuII	CAGCTG	1 cut(s)	504
RsaI	GTAC	1 cut(s)	692
RsaNI	GTAC	1 cut(s)	691
SaqAI	TTAA	2 cut(s)	741, 760
SatI	GCNGC	2 cut(s)	505, 756
Sau3AI	GATC	6 cut(s)	26, 77, 244, 373, 571, 696
Sau96I	GGNCC	3 cut(s)	187, 485, 590
ScrFI	CCNGG	2 cut(s)	303, 410
SduI	GDGCHC	2 cut(s)	94, 310
SetI	ASST	7 cut(s)	117, 207, 490, 506, 542, 621, 760
SfaNI	GCATC	1 cut(s)	202
SinI	GGWCC	2 cut(s)	187, 485
SmlI	CTYRAG	3 cut(s)	200, 494, 740
SmoI	CTYRAG	3 cut(s)	200, 494, 740
Sse9I	AATT	6 cut(s)	15, 288, 531, 562, 676, 724
SspMI	CTAG	2 cut(s)	377, 711
StyD4I	CCNGG	2 cut(s)	301, 408
StyI	CCWWGG	1 cut(s)	85
TaaI	ACNGT	3 cut(s)	182, 404, 469
TaiI	ACGT	1 cut(s)	117
TaqI	TCGA	2 cut(s)	76, 210
TaqII	GACCGA	1 cut(s)	254
TasI	AATT	6 cut(s)	15, 288, 531, 562, 676, 724
TatI	WGTACW	1 cut(s)	690
TfiI	GAWTC	2 cut(s)	265, 657
Tru1I	TTAA	2 cut(s)	741, 760
Tru9I	TTAA	2 cut(s)	741, 760
TscAI	CASTG	3 cut(s)	327, 514, 552
TseFI	GTSAC	2 cut(s)	316, 404
TseI	GCWGC	2 cut(s)	504, 755
Tsp45I	GTSAC	2 cut(s)	316, 404
TspDTI	ATGAA	1 cut(s)	405
TspRI	CASTG	3 cut(s)	327, 514, 552
Van91I	CCANNNNNTGG	1 cut(s)	607
Vha464I	CTTAAG	1 cut(s)	740
VpaK11BI	GGWCC	2 cut(s)	187, 485
XagI	CCTNNNNNAGG	1 cut(s)	623
XapI	RAATTY	1 cut(s)	562
XceI	RCATGY	1 cut(s)	370
XmnI	GAANNNNTTC	2 cut(s)	264, 629
XspI	CTAG	2 cut(s)	377, 711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.