Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007059

Physical Location & Seq

Genomic Coordinates Forward (+)

26544879 .. 26550083

Gene Structure 5205 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G250700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3291 bp

ATGCCTACGCCGGTTACTGTGGCCAGGCAATGCTTAACTCCGGAGGCAGCCCACGCGCTCGACGAGGCCGTGGCGGTGGCGCGACGCAGAGGCCACGGCCAAACGACGTCGCTGCACGCCGTGTCCGCTCTGCTTTCCCTCTCGTCCTCCACGCTGCGCGAGGCCTGCGCGCGCGCCCGAAACTCCGCCTACCCGCCGCGTCTCCAATTCAAGGCTCTCGAGCTCTGCCTCAGCGTCTCACTCGACCGGGTCCCCTCGACCCAACTCGCCGACGACCCTCCCGTGTCGAACTCGCTCATGGCCGCCGTCAAACGGTCGCAAGCCAACCAGAGAAGACAGCCCGAAAATTACCATCTCTACCACCAGCTCTCGCAGCAGTCCTCCATCTCCGCCGTTAAAGTGGAGCTCCAGCAGCTGATTCTGTCCATTCTCGACGACCCGGTTGTCAGTCGGGTCTTCGCCGAGGCGGGTTTTCGGAGCTCCGAAATTAAGCTCGCTATTTTGCGCCCTTTTCCTCAGCTCCTCAGGTACTCGCGCTCCAGAGCTCACCATCCTCTGTTTCTCTGCAACCTGACCGAGTATCCGGACCAGGTTCGCCGGACCCGACCCTCCTTTCCCTTCTCGGGTTCTTTAACCGACGGGGACGAGAATTCAAGGAGAATAGGACAGGTTCTCATTAGAAACAGAGGAAGGAATCCTCTGCTTGTTGGTGTATACGCTTACGATGCGCTTCAGAGCTTCGTGGAAGCTTTGGAGAAAATAAAAGATGGTGTTTTGCCTGTGGAGCTTTCTGGGTTGAGTGTAGTTTCCACTGAAAAAGATTTCTCAAAGTTCATAACAGAGGATTGCGATAAAGGGTCTGTAAATTTGAAGTTTGGGGAGATGGGTCAGTTGGTAGAGCAGAGTTTGGGACCTGGGCTTCTTGTGAACATTGGAGACTTGAAGGCGTTTGTTGCAGACAATGCTTTAGGTGACTCAGTGAGTTACGTGGTTGCTCAATTGACCAGGTTGCTGGAGCTTCATCGTGGGAAAGTATGGTTGACTGGTGCCACAGCTAGCTATGGAAGCTACCTGAAATTTATTGGTAGGTTCCCGTCCATAGAAAAAGACTGGGACTTGCAGCTTTTGCCCATCACCTCTCTCAGACCTCCCTTGTCTGAATCGTATCCCAGGTCCAGCTTGATGGAGTCTTTTGTTCCATTTGGTGGATTCTTTTCAGCACCTTCTGACCTAAACCTCCCAATAAGTAGTTCATATCAGTGCGTGCCCCGCAATCATCCGTGCAATGAAAAATGCGGGCAAGAAGCATATGCTGCTCCAAAGGGCGGTGTTGCTGCTTCAGTGGCAGGTCAGCATCAAGCTAGCTTGCCTTCTTGGTTGCAGATGGCTCCACTTGGCATAAACAAGGGAATTGATACGAAGACCAAAGATGATGGTGTGTTATTGAGTGCCAAAGTTACAGGGCTACAAGACAAATGGGGTGATACATGCCAACATCTTCATCACCCTCATCCCCTGCCTGAAGCAAACTTGTTTCCAACTATAGTGGGCTTTCAGTCTCCTGAAGACAAAAAGGACAATCAAGGCAACAACACGGACATTTCTTCAAATAAAACTGAGTGCAAGAATACAAATTCATGCATGCCCATAGATGTGCAAACAAAATCAAGCGTTCCTCCCCAAGCTACTAATGACAGTTTCTCATCTGAAGTATGGGAAAATCCTTCGAAAGATGAAGATCTTGAGTCGGGTGGCCTCAGGTCTCCTTCCCTGTCCAATTCTAGTGTGGTTGACGGTAGCCGAACATCTGCTACATCTACCACTTCCGTGACCACAGATTTAGGGTTAGGAATATGCTCTTCTCCTGCTAGTAATACAGCCAATAAACCTCCAAATCAGAATCAAGGACTTAAACAGGACATCTCAGGTTGCCTTTCCTGTAATGTAGATATAGTCAATGGGAATCTCTATTCTGTTCAATCATCATCCTGCTCAAGTCTTGACAACCATGGGCAGTTTGATCCAAGTGATGTCAAGGTGCTTTTTAGAGCTCTCTTTGAGAGGGTTGGCTGGCAAATTGAAGCTATAAGTGTTATTAGCCAAAGAATAGCTCACTGCCGATCGAGAAGTGAAAATTTCGTTGGAGCAAGTCACAGAAGGGACATATGGTTCAATTTTTCAGGACCTGATAGGTATGGCAAAAAGAAAACTGCTGTTGCCCTTGCTGAGGTATTATATGGAGGCCAGGAACAATTGATCTGTGTGGATCTGGATTCTCAGGACGGAATGATCCATTCAGACACTATCTTTGACTGTCAAGCAGTGAATGGTTATGATGTGAAGTTTAGAGGTAAGACGGTTGTTGATTATGTTGCCGGAGAATTGTGCAAGAAACCCTTGTCCATTGTCTTCCTAGAAAATGTTGACAAGGCGGATGTGGTGACTCGAAATTGTTTGTCCCTGGCTTTATCGACTGGTAAGTTCTTAGACTCCCATGGAAGACAAGTCAGCACCAGTAATGCAATATTTGTTACAACTTCAAAATTCTCAAAGGGATGCAGTAATCTCACTTCCACAAACGGACCCTCCAACTATTCCGAGGAAAGAATCTTGCAAGCGAAAGGGCGGTCAGTGCAGATCACCATTGAATGTTCCTTTGAAGACAGCATGGCCATAAGCCAAAACTGGAGGGCATCCTCCAATACAACTAAAGAAGGCATATCCAACCAACATCTTCTGAATAAAAGGAAACTGATTGGTGTCAATGAGCCTCTAGAGCAGCATGAAGTCTCAGAGATGCCCAAACGTGCTAACAAGACATCAACTAGGTATCTGGATCTCAACCTTCCAGCTGAAGAAACTGCAGCACAAGACACAGACGATGGGAGCTCTGAAAACGACTGCCCATCTGAAAACTCCAAGCCTTGGTTGCAAGAATTCTTTGAGAAGGTGGATGATACAGTGGTATTCAAACCGGTTGATTTTGATGCACTTGCAGAGAAAATATCAAAGGAGATCAAGAACAGTTTCCACAAGTTTGTTGACACCGAGTGTTTGCTAGAAATCGACTCAAAAGTCATGGAACAACTACTTGCAGCAGTGTATTTGACAGACGGGTATAAGGTGGTGGAAACTTGGGTAGAGCAAGTACTGAGCAGGGGATTTGCAGAAGTTCAGAAGAGATATAGCTCCAATGCAATTACTATGCTAAAACTTAAAACTTGTGAGGGGCTTTGCTTGGAGCAGCCAGCACCAAAAACTTTCCTTCTCCCCAGCATTATACTAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009719 GO:0009725 GO:0010033 GO:0014070 GO:0033993 GO:0042221 GO:0050896 GO:1901700 GO:1902347

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_2 Clp_N

Protein Analysis

1097

Amino Acids

120.28

Weight (kDa)

6.06

Isoelectric Point (pI)

48.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007059)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40130 AT2G40130
fragaria_vesca	FvH4_7g24540 FvH4_7g24540
malus_domestica	MD01G1153400.v1.1 MD07G1222400.v1.1
prunus_persica	Prupe.2G250700_v2.0.a1 Prupe.2G250700_v2.0.a1
pyrus_communis	pycom01g17100 pycom07g20100 pycom07g20110
rosa_chinensis	RchiOBHm_Chr1g0370371
rosa_laevigata	RLG00000027054
rosa_multiflora	Rmu_co8224134.1_g000001 Rmu_co8315027.1_g000001 Rmu_sc0006707.1_g000030 Rmu_sc0029129.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286640
rosa_rugosa	Rorug01G0355800 Rorug01G0355900
rosa_samantha	Rh1AG364200 Rh1BG327500 Rh1CG340500 Rh1DG357800
rosa_wichuraiana	Rw1G032050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	443, 3074
AatII	GACGTC	1 cut(s)	110
Acc36I	ACCTGC	1 cut(s)	1337
AccB1I	GGYRCC	1 cut(s)	1046
AccB7I	CCANNNNNTGG	2 cut(s)	1205, 2925
AccBSI	CCGCTC	1 cut(s)	128
AccI	GTMKAC	1 cut(s)	714
AccII	CGCG	8 cut(s)	56, 82, 159, 170, 172, 174, 199, 535
AccIII	TCCGGA	2 cut(s)	40, 583
AclWI	GGATC	4 cut(s)	2015, 2274, 2284, 2844
AcoI	YGGCCR	4 cut(s)	21, 97, 300, 2670
AcsI	RAATTY	7 cut(s)	649, 865, 1076, 1633, 2134, 2543, 2936
AcuI	CTGAAG	6 cut(s)	716, 1323, 1542, 1584, 1728, 2874
AcyI	GRCGYC	1 cut(s)	107
AdeI	CACNNNGTG	2 cut(s)	121, 3051
AfaI	GTAC	2 cut(s)	530, 3150
AfiI	CCNNNNNNNGG	7 cut(s)	211, 312, 623, 1205, 1325, 2227, 2925
AgeI	ACCGGT	1 cut(s)	2974
AjnI	CCWGG	7 cut(s)	23, 588, 913, 1004, 1169, 2244, 2460
AjuI	GAANNNNNNNTTGG	4 cut(s)	1234, 1266, 2124, 2156
AleI	CACNNNNGTG	1 cut(s)	1826
AloI	GAACNNNNNNTCC	2 cut(s)	2153, 2185
Alw21I	GWGCWC	6 cut(s)	225, 408, 482, 547, 2053, 2891
Alw26I	GTCTC	6 cut(s)	206, 241, 930, 1563, 1767, 2794
AlwI	GGATC	4 cut(s)	2015, 2274, 2284, 2844
AlwNI	CAGNNNCTG	2 cut(s)	415, 2186
Ama87I	CYCGRG	2 cut(s)	218, 622
Aor13HI	TCCGGA	2 cut(s)	40, 583
AoxI	GGCC	9 cut(s)	21, 66, 91, 97, 162, 300, 1753, 2242, 2670
ApoI	RAATTY	7 cut(s)	649, 865, 1076, 1633, 2134, 2543, 2936
ArsI	GACNNNNNNTTYG	4 cut(s)	2291, 2323, 2612, 2644
AsiGI	ACCGGT	1 cut(s)	2974
Asp700I	GAANNNNTTC	1 cut(s)	3026
AspS9I	GGNCC	7 cut(s)	250, 586, 600, 911, 1173, 2183, 2582
AsuC2I	CCSGG	2 cut(s)	248, 440
AsuHPI	GGTGA	7 cut(s)	539, 983, 1126, 1493, 1496, 2452, 2632
AsuII	TTCGAA	1 cut(s)	1727
AsuNHI	GCTAGC	2 cut(s)	1055, 1361
AvaI	CYCGRG	2 cut(s)	218, 622
AvaII	GGWCC	7 cut(s)	250, 586, 600, 911, 1173, 2183, 2582
AxyI	CCTNAGG	2 cut(s)	524, 1757
BaeGI	GKGCMC	1 cut(s)	1269
BaeI	ACNNNNGTAYC	2 cut(s)	2949, 2982
BalI	TGGCCA	2 cut(s)	23, 2672
BanI	GGYRCC	1 cut(s)	1046
BanII	GRGCYC	6 cut(s)	225, 408, 482, 547, 2053, 2891
BarI	GAAGNNNNNNTAC	2 cut(s)	2554, 2586
BbsI	GAAGAC	7 cut(s)	340, 448, 1427, 1572, 2401, 2506, 2667
Bbv12I	GWGCWC	6 cut(s)	225, 408, 482, 547, 2053, 2891
BbvCI	CCTCAGC	3 cut(s)	230, 516, 2226
BceAI	ACGGC	5 cut(s)	53, 104, 112, 290, 377
BcgI	CGANNNNNNTGC	2 cut(s)	94, 128
BciT130I	CCWGG	7 cut(s)	25, 590, 915, 1006, 1171, 2246, 2462
BciVI	GTATCC	2 cut(s)	591, 1176
BcnI	CCSGG	2 cut(s)	248, 440
BcoDI	GTCTC	6 cut(s)	206, 241, 930, 1563, 1767, 2794
BfaI	CTAG	8 cut(s)	1056, 1362, 1782, 1869, 2414, 2774, 2826, 3059
BfmI	CTRYAG	2 cut(s)	1542, 2862
BfuAI	ACCTGC	1 cut(s)	1337
BfuI	GTATCC	2 cut(s)	591, 1176
BglII	AGATCT	1 cut(s)	1738
BmcAI	AGTACT	1 cut(s)	3150
Bme1390I	CCNGG	9 cut(s)	25, 248, 440, 590, 915, 1006, 1171, 2246, 2462
Bme18I	GGWCC	7 cut(s)	250, 586, 600, 911, 1173, 2183, 2582
BmeT110I	CYCGRG	2 cut(s)	218, 622
BmgT120I	GGNCC	7 cut(s)	250, 586, 600, 911, 1173, 2183, 2582
BmiI	GGNNCC	8 cut(s)	251, 252, 602, 912, 1048, 1091, 1389, 2584
BmrFI	CCNGG	9 cut(s)	25, 248, 440, 590, 915, 1006, 1171, 2246, 2462
BmrI	ACTGGG	1 cut(s)	1120
BmsI	GCATC	6 cut(s)	715, 1363, 2546, 2702, 2787, 2977
BmtI	GCTAGC	2 cut(s)	1059, 1365
BmuI	ACTGGG	1 cut(s)	1120
BpiI	GAAGAC	7 cut(s)	340, 448, 1427, 1572, 2401, 2506, 2667
BpmI	CTGGAG	4 cut(s)	392, 523, 1034, 2707
Bpu10I	CCTNAGC	3 cut(s)	230, 516, 2226
Bpu14I	TTCGAA	1 cut(s)	1727
BpuEI	CTTGAG	2 cut(s)	1763, 1978
BpuMI	CCSGG	2 cut(s)	248, 440
BsaAI	YACGTR	1 cut(s)	988
BsaBI	GATNNNNATC	1 cut(s)	1737
BsaHI	GRCGYC	1 cut(s)	107
BsaI	GGTCTC	1 cut(s)	1767
BsaWI	WCCGGW	3 cut(s)	40, 583, 2974
BsaXI	ACNNNNNCTCC	4 cut(s)	521, 551, 2570, 2600
Bsc4I	CCNNNNNNNGG	7 cut(s)	211, 312, 623, 1205, 1325, 2227, 2925
Bse118I	RCCGGY	2 cut(s)	10, 2974
Bse1I	ACTGG	5 cut(s)	1048, 1115, 2479, 2514, 2690
Bse21I	CCTNAGG	2 cut(s)	524, 1757
Bse3DI	GCAATG	2 cut(s)	35, 1291
Bse8I	GATNNNNATC	1 cut(s)	1737
BseAI	TCCGGA	2 cut(s)	40, 583
BseBI	CCWGG	7 cut(s)	25, 590, 915, 1006, 1171, 2246, 2462
BseGI	GGATG	8 cut(s)	550, 1276, 1510, 1985, 2440, 2561, 2693, 2959
BseJI	GATNNNNATC	1 cut(s)	1737
BseLI	CCNNNNNNNGG	7 cut(s)	211, 312, 623, 1205, 1325, 2227, 2925
BseMI	GCAATG	2 cut(s)	35, 1291
BseNI	ACTGG	5 cut(s)	1048, 1115, 2479, 2514, 2690
BsePI	GCGCGC	3 cut(s)	168, 170, 172
BseRI	GAGGAG	1 cut(s)	512
BseSI	GKGCMC	1 cut(s)	1269
BseYI	CCCAGC	1 cut(s)	3272
BsgI	GTGCAG	2 cut(s)	98, 2654
Bsh1236I	CGCG	8 cut(s)	56, 82, 159, 170, 172, 174, 199, 535
Bsh1285I	CGRYCG	3 cut(s)	247, 317, 2123
BshFI	GGCC	9 cut(s)	23, 68, 93, 99, 164, 302, 1755, 2244, 2672
BshNI	GGYRCC	1 cut(s)	1046
BshTI	ACCGGT	1 cut(s)	2974
BsiEI	CGRYCG	3 cut(s)	247, 317, 2123
BsiHKAI	GWGCWC	6 cut(s)	225, 408, 482, 547, 2053, 2891
BsiHKCI	CYCGRG	2 cut(s)	218, 622
BsiSI	CCGG	8 cut(s)	11, 41, 247, 440, 584, 598, 2376, 2975
BslFI	GGGAC	6 cut(s)	236, 656, 924, 1127, 2174, 2443
BslI	CCNNNNNNNGG	7 cut(s)	211, 312, 623, 1205, 1325, 2227, 2925
BsmAI	GTCTC	6 cut(s)	206, 241, 930, 1563, 1767, 2794
BsmBI	CGTCTC	2 cut(s)	206, 241
BsmFI	GGGAC	6 cut(s)	236, 656, 924, 1127, 2174, 2443
BsnI	GGCC	9 cut(s)	23, 68, 93, 99, 164, 302, 1755, 2244, 2672
Bso31I	GGTCTC	1 cut(s)	1767
BsoBI	CYCGRG	2 cut(s)	218, 622
Bsp119I	TTCGAA	1 cut(s)	1727
Bsp1286I	GDGCHC	7 cut(s)	225, 408, 482, 547, 1269, 2053, 2891
Bsp13I	TCCGGA	2 cut(s)	40, 583
Bsp143I	GATC	9 cut(s)	1738, 2020, 2120, 2256, 2266, 2289, 2637, 2836, 3015
Bsp19I	CCATGG	2 cut(s)	2008, 2494
BspANI	GGCC	9 cut(s)	23, 68, 93, 99, 164, 302, 1755, 2244, 2672
BspEI	TCCGGA	2 cut(s)	40, 583
BspFNI	CGCG	8 cut(s)	56, 82, 159, 170, 172, 174, 199, 535
BspLI	GGNNCC	8 cut(s)	251, 252, 602, 912, 1048, 1091, 1389, 2584
BspMAI	CTGCAG	1 cut(s)	2866
BspMI	ACCTGC	1 cut(s)	1337
BspOI	GCTAGC	2 cut(s)	1059, 1365
BspPI	GGATC	4 cut(s)	2015, 2274, 2284, 2844
BspQI	GCTCTTC	1 cut(s)	1864
BspT104I	TTCGAA	1 cut(s)	1727
BspT107I	GGYRCC	1 cut(s)	1046
BspTNI	GGTCTC	1 cut(s)	1767
BsrBI	CCGCTC	1 cut(s)	128
BsrDI	GCAATG	2 cut(s)	35, 1291
BsrFI	RCCGGY	2 cut(s)	10, 2974
BsrI	ACTGG	5 cut(s)	1048, 1115, 2479, 2514, 2690
BssAI	RCCGGY	2 cut(s)	10, 2974
BssHII	GCGCGC	3 cut(s)	168, 170, 172
BssMI	GATC	9 cut(s)	1738, 2020, 2120, 2256, 2266, 2289, 2637, 2836, 3015
BssNAI	GTATAC	1 cut(s)	715
BssNI	GRCGYC	1 cut(s)	107
BssT1I	CCWWGG	3 cut(s)	2008, 2494, 2924
Bst1107I	GTATAC	1 cut(s)	715
Bst2UI	CCWGG	7 cut(s)	25, 590, 915, 1006, 1171, 2246, 2462
Bst4CI	ACNGT	8 cut(s)	19, 315, 1697, 1796, 2315, 2359, 2962, 3026
Bst6I	CTCTTC	2 cut(s)	1864, 3173
BstACI	GRCGYC	1 cut(s)	107
BstAPI	GCANNNNNTGC	3 cut(s)	962, 1126, 1313
BstBAI	YACGTR	1 cut(s)	988
BstBI	TTCGAA	1 cut(s)	1727
BstDSI	CCRYGG	4 cut(s)	69, 94, 2008, 2494
BstENI	CCTNNNNNAGG	1 cut(s)	2225
BstF5I	GGATG	8 cut(s)	550, 1276, 1510, 1985, 2440, 2561, 2693, 2959
BstFNI	CGCG	8 cut(s)	56, 82, 159, 170, 172, 174, 199, 535
BstKTI	GATC	9 cut(s)	1741, 2023, 2123, 2259, 2269, 2292, 2640, 2839, 3018
BstMAI	GTCTC	6 cut(s)	206, 241, 930, 1563, 1767, 2794
BstMBI	GATC	9 cut(s)	1738, 2020, 2120, 2256, 2266, 2289, 2637, 2836, 3015
BstMCI	CGRYCG	3 cut(s)	247, 317, 2123
BstNI	CCWGG	7 cut(s)	25, 590, 915, 1006, 1171, 2246, 2462
BstNSI	RCATGY	2 cut(s)	1491, 1645
BstSCI	CCNGG	9 cut(s)	23, 246, 438, 588, 913, 1004, 1169, 2244, 2460
BstSFI	CTRYAG	2 cut(s)	1542, 2862
BstSLI	GKGCMC	1 cut(s)	1269
BstUI	CGCG	8 cut(s)	56, 82, 159, 170, 172, 174, 199, 535
BstV2I	GAAGAC	7 cut(s)	340, 448, 1427, 1572, 2401, 2506, 2667
BstX2I	RGATCY	3 cut(s)	1738, 2266, 2836
BstXI	CCANNNNNNTGG	2 cut(s)	1012, 1183
BstYI	RGATCY	3 cut(s)	1738, 2266, 2836
BstZ17I	GTATAC	1 cut(s)	715
Bsu36I	CCTNAGG	2 cut(s)	524, 1757
BsuI	GTATCC	2 cut(s)	591, 1176
BsuRI	GGCC	9 cut(s)	23, 68, 93, 99, 164, 302, 1755, 2244, 2672
BtgI	CCRYGG	4 cut(s)	69, 94, 2008, 2494
BtsCI	GGATG	8 cut(s)	550, 1276, 1510, 1985, 2440, 2561, 2693, 2959
BtsI	GCAGTG	3 cut(s)	2113, 2328, 3105
BtsIMutI	CAGTG	9 cut(s)	810, 984, 1265, 1347, 2113, 2328, 2637, 2967, 3105
BveI	ACCTGC	1 cut(s)	1337
CaiI	CAGNNNCTG	2 cut(s)	415, 2186
Cfr10I	RCCGGY	2 cut(s)	10, 2974
Cfr13I	GGNCC	7 cut(s)	250, 586, 600, 911, 1173, 2183, 2582
CseI	GACGC	3 cut(s)	93, 188, 223
CsiI	ACCWGGT	2 cut(s)	588, 1004
Csp6I	GTAC	2 cut(s)	529, 3149
CspAI	ACCGGT	1 cut(s)	2974
CspCI	CAANNNNNGTGG	2 cut(s)	1527, 1562
CviAII	CATG	9 cut(s)	298, 1488, 1638, 1642, 2009, 2495, 2668, 2783, 3079
CviQI	GTAC	2 cut(s)	529, 3149
DpnI	GATC	9 cut(s)	1740, 2022, 2122, 2258, 2268, 2291, 2639, 2838, 3017
DpnII	GATC	9 cut(s)	1738, 2020, 2120, 2256, 2266, 2289, 2637, 2836, 3015
DraIII	CACNNNGTG	2 cut(s)	121, 3051
DrdI	GACNNNNNNGTC	2 cut(s)	443, 3074
DseDI	GACNNNNNNGTC	2 cut(s)	443, 3074
EaeI	YGGCCR	4 cut(s)	21, 97, 300, 2670
Eam1104I	CTCTTC	2 cut(s)	1864, 3173
EarI	CTCTTC	2 cut(s)	1864, 3173
EciI	GGCGGA	3 cut(s)	175, 379, 2447
Ecl136II	GAGCTC	6 cut(s)	223, 406, 480, 545, 2051, 2889
Eco130I	CCWWGG	3 cut(s)	2008, 2494, 2924
Eco147I	AGGCCT	1 cut(s)	164
Eco24I	GRGCYC	6 cut(s)	225, 408, 482, 547, 2053, 2891
Eco31I	GGTCTC	1 cut(s)	1767
Eco47I	GGWCC	7 cut(s)	250, 586, 600, 911, 1173, 2183, 2582
Eco53kI	GAGCTC	6 cut(s)	223, 406, 480, 545, 2051, 2889
Eco57I	CTGAAG	6 cut(s)	716, 1323, 1542, 1584, 1728, 2874
Eco81I	CCTNAGG	2 cut(s)	524, 1757
Eco88I	CYCGRG	2 cut(s)	218, 622
EcoICRI	GAGCTC	6 cut(s)	223, 406, 480, 545, 2051, 2889
EcoNI	CCTNNNNNAGG	1 cut(s)	2225
EcoO109I	RGGNCCY	3 cut(s)	250, 911, 2183
EcoRI	GAATTC	2 cut(s)	649, 2936
EcoRII	CCWGG	7 cut(s)	23, 588, 913, 1004, 1169, 2244, 2460
EcoT14I	CCWWGG	3 cut(s)	2008, 2494, 2924
EcoT22I	ATGCAT	1 cut(s)	1643
EcoT38I	GRGCYC	6 cut(s)	225, 408, 482, 547, 2053, 2891
ErhI	CCWWGG	3 cut(s)	2008, 2494, 2924
Esp3I	CGTCTC	2 cut(s)	206, 241
FaeI	CATG	9 cut(s)	301, 1491, 1641, 1645, 2012, 2498, 2671, 2786, 3082
FalI	AAGNNNNNCTT	2 cut(s)	2381, 2413
FaqI	GGGAC	6 cut(s)	236, 656, 924, 1127, 2174, 2443
FatI	CATG	9 cut(s)	297, 1487, 1637, 1641, 2008, 2494, 2667, 2782, 3078
FauI	CCCGC	4 cut(s)	201, 460, 1277, 1289
FauNDI	CATATG	2 cut(s)	1309, 2165
FblI	GTMKAC	1 cut(s)	714
FokI	GGATG	8 cut(s)	537, 1263, 1497, 1972, 2447, 2568, 2680, 2966
FriOI	GRGCYC	6 cut(s)	225, 408, 482, 547, 2053, 2891
FspBI	CTAG	8 cut(s)	1056, 1362, 1782, 1869, 2414, 2774, 2826, 3059
GsaI	CCCAGC	1 cut(s)	3276
GsuI	CTGGAG	4 cut(s)	392, 523, 1034, 2707
HaeIII	GGCC	9 cut(s)	23, 68, 93, 99, 164, 302, 1755, 2244, 2672
HapII	CCGG	8 cut(s)	11, 41, 247, 440, 584, 598, 2376, 2975
HgaI	GACGC	3 cut(s)	93, 188, 223
Hin1I	GRCGYC	1 cut(s)	107
Hin1II	CATG	9 cut(s)	301, 1491, 1641, 1645, 2012, 2498, 2671, 2786, 3082
HincII	GTYRAC	4 cut(s)	1041, 1792, 2425, 3043
HindII	GTYRAC	4 cut(s)	1041, 1792, 2425, 3043
HindIII	AAGCTT	1 cut(s)	747
HpaII	CCGG	8 cut(s)	11, 41, 247, 440, 584, 598, 2376, 2975
HphI	GGTGA	7 cut(s)	539, 983, 1126, 1493, 1496, 2452, 2632
Hpy166II	GTNNAC	6 cut(s)	715, 928, 1041, 1792, 2425, 3043
Hpy8I	GTNNAC	6 cut(s)	715, 928, 1041, 1792, 2425, 3043
Hpy99I	CGWCG	7 cut(s)	65, 87, 109, 112, 275, 437, 641
HpyCH4III	ACNGT	8 cut(s)	19, 315, 1697, 1796, 2315, 2359, 2962, 3026
HpyCH4IV	ACGT	3 cut(s)	107, 987, 2806
HpySE526I	ACGT	3 cut(s)	107, 987, 2806
Hsp92I	GRCGYC	1 cut(s)	107
Hsp92II	CATG	9 cut(s)	301, 1491, 1641, 1645, 2012, 2498, 2671, 2786, 3082
KflI	GGGWCCC	1 cut(s)	250
Kpn2I	TCCGGA	2 cut(s)	40, 583
Kzo9I	GATC	9 cut(s)	1738, 2020, 2120, 2256, 2266, 2289, 2637, 2836, 3015
LguI	GCTCTTC	1 cut(s)	1864
LweI	GCATC	6 cut(s)	715, 1363, 2546, 2702, 2787, 2977
MabI	ACCWGGT	2 cut(s)	588, 1004
MaeI	CTAG	8 cut(s)	1056, 1362, 1782, 1869, 2414, 2774, 2826, 3059
MaeII	ACGT	3 cut(s)	107, 987, 2806
MaeIII	GTNAC	8 cut(s)	13, 971, 983, 1456, 1828, 2150, 2440, 2530
MalI	GATC	9 cut(s)	1740, 2022, 2122, 2258, 2268, 2291, 2639, 2838, 3017
MauBI	CGCGCGCG	1 cut(s)	170
MbiI	CCGCTC	1 cut(s)	128
MboI	GATC	9 cut(s)	1738, 2020, 2120, 2256, 2266, 2289, 2637, 2836, 3015
MfeI	CAATTG	2 cut(s)	998, 2252
MflI	RGATCY	3 cut(s)	1738, 2266, 2836
MhlI	GDGCHC	7 cut(s)	225, 408, 482, 547, 1269, 2053, 2891
MlsI	TGGCCA	2 cut(s)	23, 2672
MluNI	TGGCCA	2 cut(s)	23, 2672
MlyI	GAGTC	6 cut(s)	968, 1196, 1754, 2437, 2483, 3062
MmeI	TCCRAC	4 cut(s)	1562, 2122, 2613, 2748
Mox20I	TGGCCA	2 cut(s)	23, 2672
Mph1103I	ATGCAT	1 cut(s)	1643
MroI	TCCGGA	2 cut(s)	40, 583
MroXI	GAANNNNTTC	1 cut(s)	3026
MscI	TGGCCA	2 cut(s)	23, 2672
MseI	TTAA	6 cut(s)	35, 396, 489, 632, 1911, 3216
MslI	CAYNNNNRTG	3 cut(s)	1258, 1652, 1826
Msp20I	TGGCCA	2 cut(s)	23, 2672
MspA1I	CMGCKG	2 cut(s)	415, 2852
MspI	CCGG	8 cut(s)	11, 41, 247, 440, 584, 598, 2376, 2975
MspR9I	CCNGG	9 cut(s)	25, 248, 440, 590, 915, 1006, 1171, 2246, 2462
MunI	CAATTG	2 cut(s)	998, 2252
MvaI	CCWGG	7 cut(s)	25, 590, 915, 1006, 1171, 2246, 2462
MvnI	CGCG	8 cut(s)	56, 82, 159, 170, 172, 174, 199, 535
NciI	CCSGG	2 cut(s)	248, 440
NcoI	CCATGG	2 cut(s)	2008, 2494
NdeI	CATATG	2 cut(s)	1309, 2165
NdeII	GATC	9 cut(s)	1738, 2020, 2120, 2256, 2266, 2289, 2637, 2836, 3015
NheI	GCTAGC	2 cut(s)	1055, 1361
NlaIII	CATG	9 cut(s)	301, 1491, 1641, 1645, 2012, 2498, 2671, 2786, 3082
NlaIV	GGNNCC	8 cut(s)	251, 252, 602, 912, 1048, 1091, 1389, 2584
NmeAIII	GCCGAG	1 cut(s)	487
NmuCI	GTSAC	4 cut(s)	971, 1828, 2150, 2440
NsiI	ATGCAT	1 cut(s)	1643
NspI	RCATGY	2 cut(s)	1491, 1645
NspV	TTCGAA	1 cut(s)	1727
OliI	CACNNNNGTG	1 cut(s)	1826
PaeI	GCATGC	1 cut(s)	1645
PaeR7I	CTCGAG	1 cut(s)	218
PauI	GCGCGC	3 cut(s)	168, 170, 172
PceI	AGGCCT	1 cut(s)	164
PciSI	GCTCTTC	1 cut(s)	1864
PcsI	WCGNNNNNNNCGW	4 cut(s)	60, 66, 279, 601
PdmI	GAANNNNTTC	1 cut(s)	3026
PfeI	GAWTC	8 cut(s)	418, 694, 1160, 1209, 1900, 1963, 2273, 2607
PflFI	GACNNNGTC	1 cut(s)	248
PflMI	CCANNNNNTGG	2 cut(s)	1205, 2925
PinAI	ACCGGT	1 cut(s)	2974
Ple19I	CGATCG	1 cut(s)	2123
PleI	GAGTC	6 cut(s)	968, 1195, 1753, 2437, 2483, 3062
PpsI	GAGTC	6 cut(s)	968, 1195, 1753, 2437, 2483, 3062
Ppu21I	YACGTR	1 cut(s)	988
PpuMI	RGGWCCY	3 cut(s)	250, 911, 2183
Psp124BI	GAGCTC	6 cut(s)	225, 408, 482, 547, 2053, 2891
Psp5II	RGGWCCY	3 cut(s)	250, 911, 2183
Psp6I	CCWGG	7 cut(s)	23, 588, 913, 1004, 1169, 2244, 2460
PspFI	CCCAGC	1 cut(s)	3272
PspGI	CCWGG	7 cut(s)	23, 588, 913, 1004, 1169, 2244, 2460
PspN4I	GGNNCC	8 cut(s)	251, 252, 602, 912, 1048, 1091, 1389, 2584
PspPI	GGNCC	7 cut(s)	250, 586, 600, 911, 1173, 2183, 2582
PspPPI	RGGWCCY	3 cut(s)	250, 911, 2183
PsrI	GAACNNNNNNTAC	2 cut(s)	1795, 1827
PstI	CTGCAG	1 cut(s)	2866
PstNI	CAGNNNCTG	2 cut(s)	415, 2186
PsuI	RGATCY	3 cut(s)	1738, 2266, 2836
PsyI	GACNNNGTC	1 cut(s)	248
PteI	GCGCGC	3 cut(s)	168, 170, 172
PvuI	CGATCG	1 cut(s)	2123
PvuII	CAGCTG	2 cut(s)	415, 2852
RsaI	GTAC	2 cut(s)	530, 3150
RsaNI	GTAC	2 cut(s)	529, 3149
RseI	CAYNNNNRTG	3 cut(s)	1258, 1652, 1826
SacI	GAGCTC	6 cut(s)	225, 408, 482, 547, 2053, 2891
SapI	GCTCTTC	1 cut(s)	1864
SaqAI	TTAA	6 cut(s)	35, 396, 489, 632, 1911, 3216
Sau3AI	GATC	9 cut(s)	1738, 2020, 2120, 2256, 2266, 2289, 2637, 2836, 3015
Sau96I	GGNCC	7 cut(s)	250, 586, 600, 911, 1173, 2183, 2582
ScaI	AGTACT	1 cut(s)	3150
SchI	GAGTC	6 cut(s)	968, 1196, 1754, 2437, 2483, 3062
ScrFI	CCNGG	9 cut(s)	25, 248, 440, 590, 915, 1006, 1171, 2246, 2462
SduI	GDGCHC	7 cut(s)	225, 408, 482, 547, 1269, 2053, 2891
SexAI	ACCWGGT	2 cut(s)	588, 1004
SfaNI	GCATC	6 cut(s)	715, 1363, 2546, 2702, 2787, 2977
SfcI	CTRYAG	2 cut(s)	1542, 2862
Sfr274I	CTCGAG	1 cut(s)	218
SfuI	TTCGAA	1 cut(s)	1727
SinI	GGWCC	7 cut(s)	250, 586, 600, 911, 1173, 2183, 2582
SlaI	CTCGAG	1 cut(s)	218
SmiMI	CAYNNNNRTG	3 cut(s)	1258, 1652, 1826
SmlI	CTYRAG	3 cut(s)	218, 1742, 1993
SmoI	CTYRAG	3 cut(s)	218, 1742, 1993
SphI	GCATGC	1 cut(s)	1645
SseBI	AGGCCT	1 cut(s)	164
SspI	AATATT	1 cut(s)	2526
SspMI	CTAG	8 cut(s)	1056, 1362, 1782, 1869, 2414, 2774, 2826, 3059
SstI	GAGCTC	6 cut(s)	225, 408, 482, 547, 2053, 2891
StuI	AGGCCT	1 cut(s)	164
StyD4I	CCNGG	9 cut(s)	23, 246, 438, 588, 913, 1004, 1169, 2244, 2460
StyI	CCWWGG	3 cut(s)	2008, 2494, 2924
TaaI	ACNGT	8 cut(s)	19, 315, 1697, 1796, 2315, 2359, 2962, 3026
TaiI	ACGT	3 cut(s)	110, 990, 2809
TaqII	GACCGA	1 cut(s)	590
TatI	WGTACW	1 cut(s)	3148
TauI	GCSGC	2 cut(s)	199, 305
TfiI	GAWTC	8 cut(s)	418, 694, 1160, 1209, 1900, 1963, 2273, 2607
Tru1I	TTAA	6 cut(s)	35, 396, 489, 632, 1911, 3216
Tru9I	TTAA	6 cut(s)	35, 396, 489, 632, 1911, 3216
TscAI	CASTG	9 cut(s)	817, 984, 1265, 1347, 2120, 2328, 2637, 2967, 3105
TseFI	GTSAC	4 cut(s)	971, 1828, 2150, 2440
Tsp45I	GTSAC	4 cut(s)	971, 1828, 2150, 2440
TspDTI	ATGAA	8 cut(s)	823, 1010, 1242, 1302, 1490, 1626, 1749, 2799
TspGWI	ACGGA	5 cut(s)	1269, 1610, 1816, 2298, 2595
TspRI	CASTG	9 cut(s)	817, 984, 1265, 1347, 2120, 2328, 2637, 2967, 3105
Tth111I	GACNNNGTC	1 cut(s)	248
Van91I	CCANNNNNTGG	2 cut(s)	1205, 2925
VpaK11BI	GGWCC	7 cut(s)	250, 586, 600, 911, 1173, 2183, 2582
XagI	CCTNNNNNAGG	1 cut(s)	2225
XapI	RAATTY	7 cut(s)	649, 865, 1076, 1633, 2134, 2543, 2936
XbaI	TCTAGA	1 cut(s)	2773
XceI	RCATGY	2 cut(s)	1491, 1645
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1783
XhoI	CTCGAG	1 cut(s)	218
XmiI	GTMKAC	1 cut(s)	714
XmnI	GAANNNNTTC	1 cut(s)	3026
XspI	CTAG	8 cut(s)	1056, 1362, 1782, 1869, 2414, 2774, 2826, 3059
ZraI	GACGTC	1 cut(s)	108
ZrmI	AGTACT	1 cut(s)	3150
Zsp2I	ATGCAT	1 cut(s)	1643

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.