AAA domain (Cdc48 subfamily)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40130 AT2G40130 |
| fragaria_vesca | FvH4_7g24540 FvH4_7g24540 |
| malus_domestica | MD01G1153400.v1.1 MD07G1222400.v1.1 |
| prunus_persica | Prupe.2G250700_v2.0.a1 Prupe.2G250700_v2.0.a1 |
| pyrus_communis | pycom01g17100 pycom07g20100 pycom07g20110 |
| rosa_chinensis | RchiOBHm_Chr1g0370371 |
| rosa_laevigata | RLG00000027054 |
| rosa_multiflora | Rmu_co8224134.1_g000001 Rmu_co8315027.1_g000001 Rmu_sc0006707.1_g000030 Rmu_sc0029129.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00286640 |
| rosa_rugosa | Rorug01G0355800 Rorug01G0355900 |
| rosa_samantha | Rh1AG364200 Rh1BG327500 Rh1CG340500 Rh1DG357800 |
| rosa_wichuraiana | Rw1G032050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 3 cut(s) | 443, 446, 2933 |
| AatII | GACGTC | 1 cut(s) | 1888 |
| Acc65I | GGTACC | 1 cut(s) | 3747 |
| AccB1I | GGYRCC | 2 cut(s) | 2455, 3747 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1205, 2784 |
| AccBSI | CCGCTC | 2 cut(s) | 540, 3015 |
| AccI | GTMKAC | 1 cut(s) | 2406 |
| AccIII | TCCGGA | 4 cut(s) | 477, 577, 1688, 3331 |
| AclI | AACGTT | 1 cut(s) | 2678 |
| AclWI | GGATC | 3 cut(s) | 1997, 2703, 3236 |
| AcoI | YGGCCR | 3 cut(s) | 21, 300, 2501 |
| AcsI | RAATTY | 7 cut(s) | 847, 1603, 1836, 2254, 2795, 3224, 3256 |
| AcuI | CTGAAG | 5 cut(s) | 960, 1572, 2082, 2733, 3148 |
| AcyI | GRCGYC | 1 cut(s) | 1885 |
| AfaI | GTAC | 5 cut(s) | 2626, 2978, 3625, 3749, 3803 |
| AfeI | AGCGCT | 1 cut(s) | 3178 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2287 |
| AjnI | CCWGG | 5 cut(s) | 23, 543, 895, 2783, 3575 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 30 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2135, 2167 |
| Alw21I | GWGCWC | 4 cut(s) | 225, 411, 485, 3451 |
| AlwI | GGATC | 3 cut(s) | 1997, 2703, 3236 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 418, 1108 |
| Ama87I | CYCGRG | 2 cut(s) | 583, 619 |
| Aor13HI | TCCGGA | 4 cut(s) | 477, 577, 1688, 3331 |
| Aor51HI | AGCGCT | 1 cut(s) | 3178 |
| ApeKI | GCWGC | 9 cut(s) | 337, 373, 376, 379, 1102, 2429, 2432, 2954, 3726 |
| ApoI | RAATTY | 7 cut(s) | 847, 1603, 1836, 2254, 2795, 3224, 3256 |
| AseI | ATTAAT | 1 cut(s) | 3351 |
| Asp718I | GGTACC | 1 cut(s) | 3747 |
| AsuC2I | CCSGG | 7 cut(s) | 248, 443, 584, 585, 591, 775, 3278 |
| AsuHPI | GGTGA | 8 cut(s) | 512, 965, 973, 995, 1490, 2791, 3105, 3307 |
| AsuII | TTCGAA | 1 cut(s) | 287 |
| AsuNHI | GCTAGC | 2 cut(s) | 1037, 1361 |
| AvaI | CYCGRG | 2 cut(s) | 583, 619 |
| AvaII | GGWCC | 8 cut(s) | 244, 580, 587, 823, 893, 1146, 2165, 3605 |
| BaeGI | GKGCMC | 1 cut(s) | 178 |
| BalI | TGGCCA | 1 cut(s) | 2503 |
| BanI | GGYRCC | 2 cut(s) | 2455, 3747 |
| BanII | GRGCYC | 4 cut(s) | 225, 411, 485, 2035 |
| BbsI | GAAGAC | 5 cut(s) | 451, 948, 1427, 1560, 2383 |
| Bbv12I | GWGCWC | 4 cut(s) | 225, 411, 485, 3451 |
| BbvCI | CCTCAGC | 2 cut(s) | 857, 2208 |
| BbvI | GCAGC | 9 cut(s) | 349, 385, 388, 391, 1114, 2416, 2444, 2966, 3713 |
| BceAI | ACGGC | 5 cut(s) | 36, 350, 367, 1050, 2681 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2834, 2868 |
| BciT130I | CCWGG | 5 cut(s) | 25, 545, 897, 2785, 3577 |
| BcnI | CCSGG | 7 cut(s) | 248, 443, 584, 585, 591, 775, 3278 |
| BfmI | CTRYAG | 3 cut(s) | 1530, 2430, 3172 |
| BfoI | RGCGCY | 3 cut(s) | 218, 1032, 3180 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 90 |
| BglII | AGATCT | 1 cut(s) | 3159 |
| BlpI | GCTNAGC | 1 cut(s) | 266 |
| Bme18I | GGWCC | 8 cut(s) | 244, 580, 587, 823, 893, 1146, 2165, 3605 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2287 |
| BmeT110I | CYCGRG | 2 cut(s) | 583, 619 |
| BmrI | ACTGGG | 2 cut(s) | 1102, 3546 |
| BmsI | GCATC | 9 cut(s) | 559, 703, 1368, 2010, 2308, 2598, 2836, 3099, 3201 |
| BmtI | GCTAGC | 2 cut(s) | 1041, 1365 |
| BmuI | ACTGGG | 2 cut(s) | 1102, 3546 |
| BoxI | GACNNNNGTC | 1 cut(s) | 585 |
| BpiI | GAAGAC | 5 cut(s) | 451, 948, 1427, 1560, 2383 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 223, 255, 2633, 2665 |
| BpmI | CTGGAG | 7 cut(s) | 188, 239, 353, 395, 2145, 2379, 2578 |
| Bpu10I | CCTNAGC | 3 cut(s) | 230, 857, 2208 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 266 |
| Bpu14I | TTCGAA | 1 cut(s) | 287 |
| BpuEI | CTTGAG | 2 cut(s) | 1960, 2089 |
| BpuMI | CCSGG | 7 cut(s) | 248, 443, 584, 585, 591, 775, 3278 |
| BsaAI | YACGTR | 1 cut(s) | 3646 |
| BsaHI | GRCGYC | 1 cut(s) | 1885 |
| BsaI | GGTCTC | 3 cut(s) | 256, 321, 2738 |
| BsaWI | WCCGGW | 6 cut(s) | 477, 577, 1688, 2291, 3115, 3331 |
| Bse118I | RCCGGY | 4 cut(s) | 10, 760, 2833, 3304 |
| Bse1I | ACTGG | 8 cut(s) | 205, 1097, 2128, 2504, 2561, 2645, 3529, 3552 |
| Bse3DI | GCAATG | 4 cut(s) | 35, 826, 1291, 2095 |
| BseAI | TCCGGA | 4 cut(s) | 477, 577, 1688, 3331 |
| BseBI | CCWGG | 5 cut(s) | 25, 545, 897, 2785, 3577 |
| BseMI | GCAATG | 4 cut(s) | 35, 826, 1291, 2095 |
| BseNI | ACTGG | 8 cut(s) | 205, 1097, 2128, 2504, 2561, 2645, 3529, 3552 |
| BsePI | GCGCGC | 3 cut(s) | 80, 168, 2526 |
| BseRI | GAGGAG | 7 cut(s) | 122, 244, 515, 546, 549, 1675, 3116 |
| BseSI | GKGCMC | 1 cut(s) | 178 |
| BseXI | GCAGC | 9 cut(s) | 349, 385, 388, 391, 1114, 2416, 2444, 2966, 3713 |
| BseYI | CCCAGC | 1 cut(s) | 261 |
| BsgI | GTGCAG | 2 cut(s) | 2528, 3576 |
| Bsh1285I | CGRYCG | 2 cut(s) | 447, 795 |
| BshNI | GGYRCC | 2 cut(s) | 2455, 3747 |
| BsiEI | CGRYCG | 2 cut(s) | 447, 795 |
| BsiHKAI | GWGCWC | 4 cut(s) | 225, 411, 485, 3451 |
| BsiHKCI | CYCGRG | 2 cut(s) | 583, 619 |
| BslFI | GGGAC | 2 cut(s) | 906, 1109 |
| BsmBI | CGTCTC | 4 cut(s) | 241, 325, 630, 2648 |
| BsmFI | GGGAC | 2 cut(s) | 906, 1109 |
| BsmI | GAATGC | 5 cut(s) | 2275, 2435, 2528, 2725, 2825 |
| Bso31I | GGTCTC | 3 cut(s) | 256, 321, 2738 |
| BsoBI | CYCGRG | 2 cut(s) | 583, 619 |
| Bsp119I | TTCGAA | 1 cut(s) | 287 |
| Bsp1286I | GDGCHC | 6 cut(s) | 178, 225, 411, 485, 2035, 3451 |
| Bsp13I | TCCGGA | 4 cut(s) | 477, 577, 1688, 3331 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 266 |
| Bsp19I | CCATGG | 1 cut(s) | 3751 |
| BspEI | TCCGGA | 4 cut(s) | 477, 577, 1688, 3331 |
| BspMAI | CTGCAG | 1 cut(s) | 2434 |
| BspOI | GCTAGC | 2 cut(s) | 1041, 1365 |
| BspPI | GGATC | 3 cut(s) | 1997, 2703, 3236 |
| BspQI | GCTCTTC | 2 cut(s) | 723, 1849 |
| BspT104I | TTCGAA | 1 cut(s) | 287 |
| BspT107I | GGYRCC | 2 cut(s) | 2455, 3747 |
| BspTNI | GGTCTC | 3 cut(s) | 256, 321, 2738 |
| BsrBI | CCGCTC | 2 cut(s) | 540, 3015 |
| BsrDI | GCAATG | 4 cut(s) | 35, 826, 1291, 2095 |
| BsrFI | RCCGGY | 4 cut(s) | 10, 760, 2833, 3304 |
| BsrI | ACTGG | 8 cut(s) | 205, 1097, 2128, 2504, 2561, 2645, 3529, 3552 |
| BssAI | RCCGGY | 4 cut(s) | 10, 760, 2833, 3304 |
| BssHII | GCGCGC | 3 cut(s) | 80, 168, 2526 |
| BssNI | GRCGYC | 1 cut(s) | 1885 |
| BssT1I | CCWWGG | 3 cut(s) | 1142, 3751, 3780 |
| Bst2UI | CCWGG | 5 cut(s) | 25, 545, 897, 2785, 3577 |
| Bst6I | CTCTTC | 7 cut(s) | 723, 1006, 1849, 1915, 2709, 3032, 3150 |
| BstACI | GRCGYC | 1 cut(s) | 1885 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1108, 1176 |
| BstBAI | YACGTR | 1 cut(s) | 3646 |
| BstBI | TTCGAA | 1 cut(s) | 287 |
| BstDSI | CCRYGG | 4 cut(s) | 18, 197, 1006, 3751 |
| BstH2I | RGCGCY | 3 cut(s) | 218, 1032, 3180 |
| BstMCI | CGRYCG | 2 cut(s) | 447, 795 |
| BstNI | CCWGG | 5 cut(s) | 25, 545, 897, 2785, 3577 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 585 |
| BstSFI | CTRYAG | 3 cut(s) | 1530, 2430, 3172 |
| BstSLI | GKGCMC | 1 cut(s) | 178 |
| BstV1I | GCAGC | 9 cut(s) | 349, 385, 388, 391, 1114, 2416, 2444, 2966, 3713 |
| BstV2I | GAAGAC | 5 cut(s) | 451, 948, 1427, 1560, 2383 |
| BstX2I | RGATCY | 2 cut(s) | 2695, 3159 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3217 |
| BstYI | RGATCY | 2 cut(s) | 2695, 3159 |
| BtgI | CCRYGG | 4 cut(s) | 18, 197, 1006, 3751 |
| BtsI | GCAGTG | 3 cut(s) | 890, 2730, 3408 |
| CaiI | CAGNNNCTG | 2 cut(s) | 418, 1108 |
| Cfr10I | RCCGGY | 4 cut(s) | 10, 760, 2833, 3304 |
| Cfr42I | CCGCGG | 1 cut(s) | 200 |
| Cfr9I | CCCGGG | 1 cut(s) | 583 |
| CseI | GACGC | 2 cut(s) | 223, 3464 |
| Csp6I | GTAC | 5 cut(s) | 2625, 2977, 3624, 3748, 3802 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1515, 1550 |
| CviAII | CATG | 7 cut(s) | 298, 388, 1374, 1490, 1892, 1991, 3752 |
| CviQI | GTAC | 5 cut(s) | 2625, 2977, 3624, 3748, 3802 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 443, 446, 2933 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2287 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 443, 446, 2933 |
| EaeI | YGGCCR | 3 cut(s) | 21, 300, 2501 |
| Eam1104I | CTCTTC | 7 cut(s) | 723, 1006, 1849, 1915, 2709, 3032, 3150 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2287 |
| EarI | CTCTTC | 7 cut(s) | 723, 1006, 1849, 1915, 2709, 3032, 3150 |
| EciI | GGCGGA | 4 cut(s) | 115, 139, 497, 3323 |
| Ecl136II | GAGCTC | 3 cut(s) | 223, 409, 483 |
| Eco130I | CCWWGG | 3 cut(s) | 1142, 3751, 3780 |
| Eco147I | AGGCCT | 1 cut(s) | 164 |
| Eco24I | GRGCYC | 4 cut(s) | 225, 411, 485, 2035 |
| Eco31I | GGTCTC | 3 cut(s) | 256, 321, 2738 |
| Eco32I | GATATC | 1 cut(s) | 1635 |
| Eco47I | GGWCC | 8 cut(s) | 244, 580, 587, 823, 893, 1146, 2165, 3605 |
| Eco47III | AGCGCT | 1 cut(s) | 3178 |
| Eco53kI | GAGCTC | 3 cut(s) | 223, 409, 483 |
| Eco57I | CTGAAG | 5 cut(s) | 960, 1572, 2082, 2733, 3148 |
| Eco88I | CYCGRG | 2 cut(s) | 583, 619 |
| EcoICRI | GAGCTC | 3 cut(s) | 223, 409, 483 |
| EcoO109I | RGGNCCY | 1 cut(s) | 893 |
| EcoRI | GAATTC | 4 cut(s) | 847, 2254, 2795, 3224 |
| EcoRII | CCWGG | 5 cut(s) | 23, 543, 895, 2783, 3575 |
| EcoRV | GATATC | 1 cut(s) | 1635 |
| EcoT14I | CCWWGG | 3 cut(s) | 1142, 3751, 3780 |
| EcoT38I | GRGCYC | 4 cut(s) | 225, 411, 485, 2035 |
| ErhI | CCWWGG | 3 cut(s) | 1142, 3751, 3780 |
| Esp3I | CGTCTC | 4 cut(s) | 241, 325, 630, 2648 |
| FaeI | CATG | 7 cut(s) | 301, 391, 1377, 1493, 1895, 1994, 3755 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1313, 1345, 1850, 1882 |
| FaqI | GGGAC | 2 cut(s) | 906, 1109 |
| FatI | CATG | 7 cut(s) | 297, 387, 1373, 1489, 1891, 1990, 3751 |
| FauI | CCCGC | 4 cut(s) | 185, 285, 463, 545 |
| FblI | GTMKAC | 1 cut(s) | 2406 |
| FriOI | GRGCYC | 4 cut(s) | 225, 411, 485, 2035 |
| GsaI | CCCAGC | 1 cut(s) | 265 |
| GsuI | CTGGAG | 7 cut(s) | 188, 239, 353, 395, 2145, 2379, 2578 |
| HaeII | RGCGCY | 3 cut(s) | 218, 1032, 3180 |
| HgaI | GACGC | 2 cut(s) | 223, 3464 |
| Hin1I | GRCGYC | 1 cut(s) | 1885 |
| Hin1II | CATG | 7 cut(s) | 301, 391, 1377, 1493, 1895, 1994, 3755 |
| HincII | GTYRAC | 4 cut(s) | 741, 984, 1889, 2682 |
| HindII | GTYRAC | 4 cut(s) | 741, 984, 1889, 2682 |
| HindIII | AAGCTT | 2 cut(s) | 1235, 2894 |
| HpaI | GTTAAC | 1 cut(s) | 741 |
| HphI | GGTGA | 8 cut(s) | 512, 965, 973, 995, 1490, 2791, 3105, 3307 |
| Hpy166II | GTNNAC | 8 cut(s) | 741, 816, 984, 1889, 2114, 2407, 2663, 2682 |
| Hpy8I | GTNNAC | 8 cut(s) | 741, 816, 984, 1889, 2114, 2407, 2663, 2682 |
| Hpy99I | CGWCG | 8 cut(s) | 65, 80, 275, 440, 600, 1081, 3155, 3186 |
| HpyCH4IV | ACGT | 5 cut(s) | 1885, 2678, 3150, 3626, 3645 |
| HpySE526I | ACGT | 5 cut(s) | 1885, 2678, 3150, 3626, 3645 |
| Hsp92I | GRCGYC | 1 cut(s) | 1885 |
| Hsp92II | CATG | 7 cut(s) | 301, 391, 1377, 1493, 1895, 1994, 3755 |
| Kpn2I | TCCGGA | 4 cut(s) | 477, 577, 1688, 3331 |
| KpnI | GGTACC | 1 cut(s) | 3751 |
| KroI | GCCGGC | 1 cut(s) | 3304 |
| KroNI | GCCGGC | 1 cut(s) | 3306 |
| KspAI | GTTAAC | 1 cut(s) | 741 |
| KspI | CCGCGG | 1 cut(s) | 200 |
| LguI | GCTCTTC | 2 cut(s) | 723, 1849 |
| Lsp1109I | GCAGC | 9 cut(s) | 349, 385, 388, 391, 1114, 2416, 2444, 2966, 3713 |
| LweI | GCATC | 9 cut(s) | 559, 703, 1368, 2010, 2308, 2598, 2836, 3099, 3201 |
| MaeII | ACGT | 5 cut(s) | 1885, 2678, 3150, 3626, 3645 |
| MaeIII | GTNAC | 5 cut(s) | 953, 1342, 1456, 1813, 3520 |
| MbiI | CCGCTC | 2 cut(s) | 540, 3015 |
| MfeI | CAATTG | 1 cut(s) | 2234 |
| MflI | RGATCY | 2 cut(s) | 2695, 3159 |
| MhlI | GDGCHC | 6 cut(s) | 178, 225, 411, 485, 2035, 3451 |
| MlsI | TGGCCA | 1 cut(s) | 2503 |
| MluNI | TGGCCA | 1 cut(s) | 2503 |
| MlyI | GAGTC | 6 cut(s) | 938, 950, 1023, 1196, 1553, 3293 |
| MmeI | TCCRAC | 7 cut(s) | 629, 1100, 1550, 1820, 2143, 2487, 2917 |
| Mox20I | TGGCCA | 1 cut(s) | 2503 |
| MroI | TCCGGA | 4 cut(s) | 477, 577, 1688, 3331 |
| MroNI | GCCGGC | 1 cut(s) | 3304 |
| MscI | TGGCCA | 1 cut(s) | 2503 |
| MseI | TTAA | 9 cut(s) | 35, 399, 740, 1244, 1740, 1868, 3075, 3351, 3456 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3279 |
| Msp20I | TGGCCA | 1 cut(s) | 2503 |
| MspA1I | CMGCKG | 2 cut(s) | 199, 2711 |
| MunI | CAATTG | 1 cut(s) | 2234 |
| Mva1269I | GAATGC | 5 cut(s) | 2275, 2435, 2528, 2725, 2825 |
| MvaI | CCWGG | 5 cut(s) | 25, 545, 897, 2785, 3577 |
| NaeI | GCCGGC | 1 cut(s) | 3306 |
| NciI | CCSGG | 7 cut(s) | 248, 443, 584, 585, 591, 775, 3278 |
| NcoI | CCATGG | 1 cut(s) | 3751 |
| NgoMIV | GCCGGC | 1 cut(s) | 3304 |
| NheI | GCTAGC | 2 cut(s) | 1037, 1361 |
| NlaIII | CATG | 7 cut(s) | 301, 391, 1377, 1493, 1895, 1994, 3755 |
| NmeAIII | GCCGAG | 1 cut(s) | 3811 |
| NmuCI | GTSAC | 3 cut(s) | 953, 1342, 1813 |
| NspV | TTCGAA | 1 cut(s) | 287 |
| PasI | CCCWGGG | 1 cut(s) | 544 |
| PauI | GCGCGC | 3 cut(s) | 80, 168, 2526 |
| PceI | AGGCCT | 1 cut(s) | 164 |
| PciSI | GCTCTTC | 2 cut(s) | 723, 1849 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 60, 279, 444 |
| PctI | GAATGC | 5 cut(s) | 2275, 2435, 2528, 2725, 2825 |
| PdiI | GCCGGC | 1 cut(s) | 3306 |
| PfeI | GAWTC | 7 cut(s) | 421, 1133, 1493, 1727, 2481, 3298, 3413 |
| PflFI | GACNNNGTC | 2 cut(s) | 248, 443 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1205, 2784 |
| PfoI | TCCNGGA | 1 cut(s) | 3575 |
| Ple19I | CGATCG | 1 cut(s) | 795 |
| PleI | GAGTC | 6 cut(s) | 938, 950, 1022, 1195, 1552, 3292 |
| PpsI | GAGTC | 6 cut(s) | 938, 950, 1022, 1195, 1552, 3292 |
| Ppu21I | YACGTR | 1 cut(s) | 3646 |
| PpuMI | RGGWCCY | 1 cut(s) | 893 |
| PshAI | GACNNNNGTC | 1 cut(s) | 585 |
| PshBI | ATTAAT | 1 cut(s) | 3351 |
| Psp124BI | GAGCTC | 3 cut(s) | 225, 411, 485 |
| Psp1406I | AACGTT | 1 cut(s) | 2678 |
| Psp5II | RGGWCCY | 1 cut(s) | 893 |
| Psp6I | CCWGG | 5 cut(s) | 23, 543, 895, 2783, 3575 |
| PspFI | CCCAGC | 1 cut(s) | 261 |
| PspGI | CCWGG | 5 cut(s) | 23, 543, 895, 2783, 3575 |
| PspPPI | RGGWCCY | 1 cut(s) | 893 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1299, 1331 |
| PstI | CTGCAG | 1 cut(s) | 2434 |
| PstNI | CAGNNNCTG | 2 cut(s) | 418, 1108 |
| PsuI | RGATCY | 2 cut(s) | 2695, 3159 |
| PsyI | GACNNNGTC | 2 cut(s) | 248, 443 |
| PteI | GCGCGC | 3 cut(s) | 80, 168, 2526 |
| PvuI | CGATCG | 1 cut(s) | 795 |
| PvuII | CAGCTG | 1 cut(s) | 2711 |
| RsaI | GTAC | 5 cut(s) | 2626, 2978, 3625, 3749, 3803 |
| RsaNI | GTAC | 5 cut(s) | 2625, 2977, 3624, 3748, 3802 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3279 |
| SacI | GAGCTC | 3 cut(s) | 225, 411, 485 |
| SacII | CCGCGG | 1 cut(s) | 200 |
| SapI | GCTCTTC | 2 cut(s) | 723, 1849 |
| SaqAI | TTAA | 9 cut(s) | 35, 399, 740, 1244, 1740, 1868, 3075, 3351, 3456 |
| SchI | GAGTC | 6 cut(s) | 938, 950, 1023, 1196, 1553, 3293 |
| SduI | GDGCHC | 6 cut(s) | 178, 225, 411, 485, 2035, 3451 |
| SfaNI | GCATC | 9 cut(s) | 559, 703, 1368, 2010, 2308, 2598, 2836, 3099, 3201 |
| SfcI | CTRYAG | 3 cut(s) | 1530, 2430, 3172 |
| Sfr303I | CCGCGG | 1 cut(s) | 200 |
| SfuI | TTCGAA | 1 cut(s) | 287 |
| SgrBI | CCGCGG | 1 cut(s) | 200 |
| SinI | GGWCC | 8 cut(s) | 244, 580, 587, 823, 893, 1146, 2165, 3605 |
| SmaI | CCCGGG | 1 cut(s) | 585 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3279 |
| SmlI | CTYRAG | 2 cut(s) | 1975, 2104 |
| SmoI | CTYRAG | 2 cut(s) | 1975, 2104 |
| SseBI | AGGCCT | 1 cut(s) | 164 |
| SspI | AATATT | 2 cut(s) | 913, 1588 |
| SstI | GAGCTC | 3 cut(s) | 225, 411, 485 |
| StuI | AGGCCT | 1 cut(s) | 164 |
| StyI | CCWWGG | 3 cut(s) | 1142, 3751, 3780 |
| TaiI | ACGT | 5 cut(s) | 1888, 2681, 3153, 3629, 3648 |
| TatI | WGTACW | 2 cut(s) | 2976, 3801 |
| TauI | GCSGC | 6 cut(s) | 50, 188, 199, 202, 305, 3322 |
| TfiI | GAWTC | 7 cut(s) | 421, 1133, 1493, 1727, 2481, 3298, 3413 |
| Tru1I | TTAA | 9 cut(s) | 35, 399, 740, 1244, 1740, 1868, 3075, 3351, 3456 |
| Tru9I | TTAA | 9 cut(s) | 35, 399, 740, 1244, 1740, 1868, 3075, 3351, 3456 |
| TseFI | GTSAC | 3 cut(s) | 953, 1342, 1813 |
| TseI | GCWGC | 9 cut(s) | 337, 373, 376, 379, 1102, 2429, 2432, 2954, 3726 |
| Tsp45I | GTSAC | 3 cut(s) | 953, 1342, 1813 |
| TspGWI | ACGGA | 3 cut(s) | 64, 648, 2374 |
| TspMI | CCCGGG | 1 cut(s) | 583 |
| Tth111I | GACNNNGTC | 2 cut(s) | 248, 443 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1205, 2784 |
| VpaK11BI | GGWCC | 8 cut(s) | 244, 580, 587, 823, 893, 1146, 2165, 3605 |
| VspI | ATTAAT | 1 cut(s) | 3351 |
| XapI | RAATTY | 7 cut(s) | 847, 1603, 1836, 2254, 2795, 3224, 3256 |
| XbaI | TCTAGA | 1 cut(s) | 2638 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2897 |
| XmaI | CCCGGG | 1 cut(s) | 583 |
| XmiI | GTMKAC | 1 cut(s) | 2406 |
| ZraI | GACGTC | 1 cut(s) | 1886 |