Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006707.1

Orthogroup ID

OG0007059

Physical Location & Seq

Genomic Coordinates Forward (+)

114075 .. 117660

Gene Structure 3586 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006707.1_g000030.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2218 bp

atgcctacgccggtttccacggccaggcaatgcttaactgcggaggcggcccacgcgctcgacgaggcggtctccgtcgcgcgccggagaggccacgcgcagaccacttccctccacgcaatctccgccctcctctctctccccaactccgccctacgcgaggcctgcgcgcgagcccgcaacgccgcctactcgccgcggctccagttcaaggcgctggagctctgcctgagcgtctcgctggaccgcgtctcctcgacccagcaaagcgacgacccgcccgtctcgaactcgctcatggccgccatcaagcggtcccaggccaaccagagacggcagccggagaactaccacctctaccaccagctccagcagcagcagccgtccatgtcctgcgttaaagtggagctccagcacctgattctctctattctcgacgacccggtcgtcagtcgggtcttcggcgaagccggtttccggagctccgaactcaggctcgccgttctccgcccttttcctcacctcctcagatactcccgctcccaggggcatcctcctcctcctcctcccctgtttctctgcaatccggacccgggtccgggtccgggccgtcgccggcccgttttccccttctcgggtttccccaacggagacgagaattgtcggagaattggagaagttctagggaggaatagaaatcctctgcttgtgggtgtgtgtgcttatgacgcgcttcacatcttcgtcggctcgttaactaaagatgggattttgccgggggagctgtccgggctgagttcaatctcgatcgaaaaggagttgtccaagttcacaacgatccattgcgatagagggtgcttgaattcgaggctgagggaggtgggggagttggcagagcagtgtttgggacctggaattgttttgaatattggagacttgaacatgtttgttgctgaagactctttgggtgactcggtgacctatgtggttgctcagttgacgaggttggtggagcttcaccgtggaagactctggttgattggcgctacggctagctatgggacctacttgaagcttgtgggcatgtttccgaccgtcgaaaaagactgggacttgcagcttctgccgatcacttcgcttggagctgaatcatatccaaggtccagcttgatggagtcatttgttccatttggtgggttcttttcggcaccttctgacccaaagcttccattaagctgttcaaatcggtgccttccccgcaatcatcagtgcaatgaaaattatgagcaagaagtatatgctgttccaaagggaggcttttctgcttcagtggcaggtcagcaccaagctagcttgccttcgtggatgcagatggctccacttggcccaaacaaggggtcggatatgaagaccaaagacaatggagtgctatcgagttccaaagttacaggactgcaaaggaaaggggatgataatacacatgaatctcgccccccgcctttagcaaacttgtttccaactatagtgggctttgagtctgctgaagacaagaagcacaatcacagcaacaagaccaatatttcttcaaatgaaaattcatgcatccctgtagatgtgcaagagatatccacatctcagtccagcgttcctccgaaggctaagagtgaaagtttctcctccggagtatgggaaaaacctacaaaagatgaagatattgaatcgggtagtgttaagtcctcttacagtttgtccaattcaagcattgttgagggtagccgaacttctccaacatcttccacttctgtgacaacagatttaggattaggaatttgctcttctcctgctagtaagttgaacttaaatctggatgaaggacgtcaacatgacatatcaggtttctcgtcttctgatgtagatttattcaatggcaattcctctatttatactgctcagtcatcattctgctcaagtcctgacaaacatgggcagtttgatccaagtgatgtcaagatgcttttcagagccctctttgagagagtgggctggcaaactgaagctataagtgctattagccaacgaatagctcgttgccactcaagaagtgaacatcggactggagctaggcacagaaggggaatgtggttcaactttgttggaccagataggtatggtaaaaagaaaattgctagtgtggttgctgaggtattatatgggagcc

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009719 GO:0009725 GO:0010033 GO:0014070 GO:0033993 GO:0042221 GO:0050896 GO:1901700 GO:1902347

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_2 Clp_N

Protein Analysis

739

Amino Acids

80.59

Weight (kDa)

8.23

Isoelectric Point (pI)

56.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007059)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40130 AT2G40130
fragaria_vesca	FvH4_7g24540 FvH4_7g24540
malus_domestica	MD01G1153400.v1.1 MD07G1222400.v1.1
prunus_persica	Prupe.2G250700_v2.0.a1 Prupe.2G250700_v2.0.a1
pyrus_communis	pycom01g17100 pycom07g20100 pycom07g20110
rosa_chinensis	RchiOBHm_Chr1g0370371
rosa_laevigata	RLG00000027054
rosa_multiflora	Rmu_co8224134.1_g000001 Rmu_co8315027.1_g000001 Rmu_sc0006707.1_g000030 Rmu_sc0029129.1_g000001
rosa_roxburghii	Rroxscaffold_4G00286640
rosa_rugosa	Rorug01G0355800 Rorug01G0355900
rosa_samantha	Rh1AG364200 Rh1BG327500 Rh1CG340500 Rh1DG357800
rosa_wichuraiana	Rw1G032050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	4 cut(s)	68, 281, 443, 446
AatII	GACGTC	1 cut(s)	1879
Acc36I	ACCTGC	1 cut(s)	1325
AccB1I	GGYRCC	2 cut(s)	1207, 1248
AccB7I	CCANNNNNTGG	1 cut(s)	1193
AccBSI	CCGCTC	1 cut(s)	540
AccIII	TCCGGA	3 cut(s)	477, 586, 1679
AclWI	GGATC	2 cut(s)	832, 1988
AcoI	YGGCCR	2 cut(s)	21, 300
AcsI	RAATTY	3 cut(s)	862, 1594, 1827
AcuI	CTGAAG	4 cut(s)	975, 1311, 1563, 2073
AcyI	GRCGYC	1 cut(s)	1876
AflIII	ACRYGT	1 cut(s)	942
AjnI	CCWGG	4 cut(s)	23, 318, 543, 910
AleI	CACNNNNGTG	1 cut(s)	1802
Alw21I	GWGCWC	3 cut(s)	225, 411, 485
Alw26I	GTCTC	7 cut(s)	76, 241, 256, 289, 325, 645, 927
AlwI	GGATC	2 cut(s)	832, 1988
AlwNI	CAGNNNCTG	2 cut(s)	418, 1123
Ama87I	CYCGRG	2 cut(s)	592, 634
Aor13HI	TCCGGA	3 cut(s)	477, 586, 1679
AoxI	GGCC	9 cut(s)	21, 48, 91, 162, 300, 321, 607, 617, 1384
ApeKI	GCWGC	5 cut(s)	337, 373, 376, 379, 1117
ApoI	RAATTY	3 cut(s)	862, 1594, 1827
ArsI	GACNNNNNNTTYG	2 cut(s)	1382, 1414
AspLEI	GCGC	9 cut(s)	58, 82, 84, 100, 170, 172, 217, 733, 1046
AsuC2I	CCSGG	7 cut(s)	443, 593, 594, 600, 606, 777, 790
AsuHPI	GGTGA	4 cut(s)	512, 980, 988, 1010
AsuNHI	GCTAGC	2 cut(s)	1052, 1349
AvaI	CYCGRG	2 cut(s)	592, 634
AvaII	GGWCC	9 cut(s)	244, 315, 589, 596, 602, 908, 1062, 1161, 2156
BanI	GGYRCC	2 cut(s)	1207, 1248
BanII	GRGCYC	5 cut(s)	178, 225, 411, 485, 2026
BarI	GAAGNNNNNNTAC	2 cut(s)	1765, 1797
BbsI	GAAGAC	6 cut(s)	451, 963, 1033, 1415, 1551, 1896
Bbv12I	GWGCWC	3 cut(s)	225, 411, 485
BbvCI	CCTCAGC	2 cut(s)	872, 2199
BbvI	GCAGC	5 cut(s)	349, 385, 388, 391, 1129
BccI	CCATC	4 cut(s)	314, 758, 1165, 1366
BceAI	ACGGC	6 cut(s)	36, 350, 367, 485, 594, 1065
BciT130I	CCWGG	4 cut(s)	25, 320, 545, 912
BcnI	CCSGG	7 cut(s)	443, 593, 594, 600, 606, 777, 790
BcoDI	GTCTC	7 cut(s)	76, 241, 256, 289, 325, 645, 927
BfaI	CTAG	6 cut(s)	683, 1053, 1350, 1845, 2121, 2187
BfmI	CTRYAG	2 cut(s)	1521, 1608
BfoI	RGCGCY	2 cut(s)	218, 1047
BfuAI	ACCTGC	1 cut(s)	1325
BglI	GCCNNNNNGGC	1 cut(s)	90
Bme18I	GGWCC	9 cut(s)	244, 315, 589, 596, 602, 908, 1062, 1161, 2156
BmeT110I	CYCGRG	2 cut(s)	592, 634
BmrI	ACTGGG	1 cut(s)	1117
BmsI	GCATC	4 cut(s)	559, 1356, 1611, 2001
BmtI	GCTAGC	2 cut(s)	1056, 1353
BmuI	ACTGGG	1 cut(s)	1117
BoxI	GACNNNNGTC	1 cut(s)	594
BpiI	GAAGAC	6 cut(s)	451, 963, 1033, 1415, 1551, 1896
BplI	GAGNNNNNCTC	2 cut(s)	56, 88
BpmI	CTGGAG	5 cut(s)	188, 239, 353, 395, 2136
Bpu10I	CCTNAGC	3 cut(s)	230, 872, 2199
BpuEI	CTTGAG	2 cut(s)	1951, 2080
BpuMI	CCSGG	7 cut(s)	443, 593, 594, 600, 606, 777, 790
BsaHI	GRCGYC	1 cut(s)	1876
BsaI	GGTCTC	1 cut(s)	76
BsaJI	CCNNGG	9 cut(s)	18, 197, 318, 543, 544, 592, 776, 1021, 1157
BsaWI	WCCGGW	3 cut(s)	477, 586, 1679
BsaXI	ACNNNNNCTCC	6 cut(s)	107, 137, 236, 266, 524, 554
Bse118I	RCCGGY	3 cut(s)	10, 470, 615
Bse1I	ACTGG	3 cut(s)	205, 1112, 2119
Bse3DI	GCAATG	3 cut(s)	35, 841, 1279
BseAI	TCCGGA	3 cut(s)	477, 586, 1679
BseBI	CCWGG	4 cut(s)	25, 320, 545, 912
BseDI	CCNNGG	9 cut(s)	18, 197, 318, 543, 544, 592, 776, 1021, 1157
BseGI	GGATG	5 cut(s)	550, 1371, 1474, 1602, 1873
BseMI	GCAATG	3 cut(s)	35, 841, 1279
BseMII	CTCAG	9 cut(s)	221, 505, 541, 785, 863, 1007, 1649, 1964, 2190
BseNI	ACTGG	3 cut(s)	205, 1112, 2119
BsePI	GCGCGC	2 cut(s)	80, 168
BseRI	GAGGAG	8 cut(s)	122, 244, 515, 546, 549, 552, 555, 1666
BseXI	GCAGC	5 cut(s)	349, 385, 388, 391, 1129
BseYI	CCCAGC	1 cut(s)	261
Bsh1285I	CGRYCG	3 cut(s)	447, 810, 1095
BshFI	GGCC	9 cut(s)	23, 50, 93, 164, 302, 323, 609, 619, 1386
BshNI	GGYRCC	2 cut(s)	1207, 1248
BsiEI	CGRYCG	3 cut(s)	447, 810, 1095
BsiHKAI	GWGCWC	3 cut(s)	225, 411, 485
BsiHKCI	CYCGRG	2 cut(s)	592, 634
BslFI	GGGAC	4 cut(s)	301, 921, 1075, 1124
BsmAI	GTCTC	7 cut(s)	76, 241, 256, 289, 325, 645, 927
BsmBI	CGTCTC	5 cut(s)	241, 256, 289, 325, 645
BsmFI	GGGAC	4 cut(s)	301, 921, 1075, 1124
BsnI	GGCC	9 cut(s)	23, 50, 93, 164, 302, 323, 609, 619, 1386
Bso31I	GGTCTC	1 cut(s)	76
BsoBI	CYCGRG	2 cut(s)	592, 634
Bsp1286I	GDGCHC	5 cut(s)	178, 225, 411, 485, 2026
Bsp13I	TCCGGA	3 cut(s)	477, 586, 1679
Bsp143I	GATC	4 cut(s)	807, 837, 1128, 1993
BspANI	GGCC	9 cut(s)	23, 50, 93, 164, 302, 323, 609, 619, 1386
BspCNI	CTCAG	9 cut(s)	222, 504, 540, 786, 864, 1006, 1648, 1963, 2191
BspEI	TCCGGA	3 cut(s)	477, 586, 1679
BspMI	ACCTGC	1 cut(s)	1325
BspOI	GCTAGC	2 cut(s)	1056, 1353
BspPI	GGATC	2 cut(s)	832, 1988
BspQI	GCTCTTC	1 cut(s)	1840
BspT107I	GGYRCC	2 cut(s)	1207, 1248
BspTNI	GGTCTC	1 cut(s)	76
BsrBI	CCGCTC	1 cut(s)	540
BsrDI	GCAATG	3 cut(s)	35, 841, 1279
BsrFI	RCCGGY	3 cut(s)	10, 470, 615
BsrI	ACTGG	3 cut(s)	205, 1112, 2119
BssAI	RCCGGY	3 cut(s)	10, 470, 615
BssECI	CCNNGG	9 cut(s)	18, 197, 318, 543, 544, 592, 776, 1021, 1157
BssHII	GCGCGC	2 cut(s)	80, 168
BssMI	GATC	4 cut(s)	807, 837, 1128, 1993
BssNI	GRCGYC	1 cut(s)	1876
BssT1I	CCWWGG	1 cut(s)	1157
Bst2UI	CCWGG	4 cut(s)	25, 320, 545, 912
Bst4CI	ACNGT	3 cut(s)	1022, 1096, 1745
Bst6I	CTCTTC	1 cut(s)	1840
BstACI	GRCGYC	1 cut(s)	1876
BstAPI	GCANNNNNTGC	1 cut(s)	1123
BstDSI	CCRYGG	3 cut(s)	18, 197, 1021
BstEII	GGTNACC	1 cut(s)	976
BstENI	CCTNNNNNAGG	1 cut(s)	158
BstF5I	GGATG	5 cut(s)	550, 1371, 1474, 1602, 1873
BstH2I	RGCGCY	2 cut(s)	218, 1047
BstHHI	GCGC	9 cut(s)	58, 82, 84, 100, 170, 172, 217, 733, 1046
BstKTI	GATC	4 cut(s)	810, 840, 1131, 1996
BstMAI	GTCTC	7 cut(s)	76, 241, 256, 289, 325, 645, 927
BstMBI	GATC	4 cut(s)	807, 837, 1128, 1993
BstMCI	CGRYCG	3 cut(s)	447, 810, 1095
BstNI	CCWGG	4 cut(s)	25, 320, 545, 912
BstNSI	RCATGY	2 cut(s)	946, 1087
BstPAI	GACNNNNGTC	1 cut(s)	594
BstPI	GGTNACC	1 cut(s)	976
BstSFI	CTRYAG	2 cut(s)	1521, 1608
BstV1I	GCAGC	5 cut(s)	349, 385, 388, 391, 1129
BstV2I	GAAGAC	6 cut(s)	451, 963, 1033, 1415, 1551, 1896
BstXI	CCANNNNNNTGG	1 cut(s)	1171
BsuRI	GGCC	9 cut(s)	23, 50, 93, 164, 302, 323, 609, 619, 1386
BtgI	CCRYGG	3 cut(s)	18, 197, 1021
BtsCI	GGATG	5 cut(s)	550, 1371, 1474, 1602, 1873
BtsI	GCAGTG	1 cut(s)	905
BtsIMutI	CAGTG	3 cut(s)	905, 1274, 1335
BveI	ACCTGC	1 cut(s)	1325
CaiI	CAGNNNCTG	2 cut(s)	418, 1123
CfoI	GCGC	9 cut(s)	58, 82, 84, 100, 170, 172, 217, 733, 1046
Cfr10I	RCCGGY	3 cut(s)	10, 470, 615
Cfr42I	CCGCGG	1 cut(s)	200
Cfr9I	CCCGGG	1 cut(s)	592
CseI	GACGC	3 cut(s)	223, 238, 737
CspCI	CAANNNNNGTGG	2 cut(s)	1506, 1541
CviAII	CATG	8 cut(s)	298, 388, 943, 1084, 1481, 1599, 1883, 1982
DpnI	GATC	4 cut(s)	809, 839, 1130, 1995
DpnII	GATC	4 cut(s)	807, 837, 1128, 1993
DrdI	GACNNNNNNGTC	4 cut(s)	68, 281, 443, 446
DseDI	GACNNNNNNGTC	4 cut(s)	68, 281, 443, 446
EaeI	YGGCCR	2 cut(s)	21, 300
Eam1104I	CTCTTC	1 cut(s)	1840
EarI	CTCTTC	1 cut(s)	1840
EciI	GGCGGA	3 cut(s)	115, 139, 497
Ecl136II	GAGCTC	3 cut(s)	223, 409, 483
Eco130I	CCWWGG	1 cut(s)	1157
Eco147I	AGGCCT	1 cut(s)	164
Eco24I	GRGCYC	5 cut(s)	178, 225, 411, 485, 2026
Eco31I	GGTCTC	1 cut(s)	76
Eco32I	GATATC	1 cut(s)	1626
Eco47I	GGWCC	9 cut(s)	244, 315, 589, 596, 602, 908, 1062, 1161, 2156
Eco53kI	GAGCTC	3 cut(s)	223, 409, 483
Eco57I	CTGAAG	4 cut(s)	975, 1311, 1563, 2073
Eco88I	CYCGRG	2 cut(s)	592, 634
Eco91I	GGTNACC	1 cut(s)	976
EcoICRI	GAGCTC	3 cut(s)	223, 409, 483
EcoNI	CCTNNNNNAGG	1 cut(s)	158
EcoO109I	RGGNCCY	2 cut(s)	908, 1062
EcoO65I	GGTNACC	1 cut(s)	976
EcoRI	GAATTC	1 cut(s)	862
EcoRII	CCWGG	4 cut(s)	23, 318, 543, 910
EcoRV	GATATC	1 cut(s)	1626
EcoT14I	CCWWGG	1 cut(s)	1157
EcoT22I	ATGCAT	1 cut(s)	1604
EcoT38I	GRGCYC	5 cut(s)	178, 225, 411, 485, 2026
ErhI	CCWWGG	1 cut(s)	1157
Esp3I	CGTCTC	5 cut(s)	241, 256, 289, 325, 645
FaeI	CATG	8 cut(s)	301, 391, 946, 1087, 1484, 1602, 1886, 1985
FalI	AAGNNNNNCTT	4 cut(s)	1301, 1333, 1841, 1873
FaqI	GGGAC	4 cut(s)	301, 921, 1075, 1124
FatI	CATG	8 cut(s)	297, 387, 942, 1083, 1480, 1598, 1882, 1981
FauI	CCCGC	5 cut(s)	185, 285, 545, 1265, 1503
FokI	GGATG	5 cut(s)	537, 1378, 1481, 1589, 1880
FriOI	GRGCYC	5 cut(s)	178, 225, 411, 485, 2026
FspBI	CTAG	6 cut(s)	683, 1053, 1350, 1845, 2121, 2187
GlaI	GCGC	9 cut(s)	57, 81, 83, 99, 169, 171, 216, 732, 1045
GsaI	CCCAGC	1 cut(s)	265
GsuI	CTGGAG	5 cut(s)	188, 239, 353, 395, 2136
HaeII	RGCGCY	2 cut(s)	218, 1047
HaeIII	GGCC	9 cut(s)	23, 50, 93, 164, 302, 323, 609, 619, 1386
HgaI	GACGC	3 cut(s)	223, 238, 737
HhaI	GCGC	9 cut(s)	58, 82, 84, 100, 170, 172, 217, 733, 1046
Hin1I	GRCGYC	1 cut(s)	1876
Hin1II	CATG	8 cut(s)	301, 391, 946, 1087, 1484, 1602, 1886, 1985
Hin6I	GCGC	9 cut(s)	56, 80, 82, 98, 168, 170, 215, 731, 1044
HinP1I	GCGC	9 cut(s)	56, 80, 82, 98, 168, 170, 215, 731, 1044
HincII	GTYRAC	3 cut(s)	756, 999, 1880
HindII	GTYRAC	3 cut(s)	756, 999, 1880
HindIII	AAGCTT	2 cut(s)	1073, 1223
HinfI	GANTC	9 cut(s)	421, 959, 971, 1029, 1148, 1175, 1484, 1535, 1718
HpaI	GTTAAC	1 cut(s)	756
HphI	GGTGA	4 cut(s)	512, 980, 988, 1010
Hpy166II	GTNNAC	5 cut(s)	756, 831, 999, 1880, 2105
Hpy8I	GTNNAC	5 cut(s)	756, 831, 999, 1880, 2105
Hpy99I	CGWCG	7 cut(s)	65, 80, 275, 440, 615, 749, 1100
HpyAV	CCTTC	7 cut(s)	640, 1221, 1262, 1368, 1648, 1865, 2124
HpyCH4III	ACNGT	3 cut(s)	1022, 1096, 1745
HpyCH4IV	ACGT	1 cut(s)	1876
HpyCH4V	TGCA	7 cut(s)	582, 1117, 1272, 1369, 1456, 1602, 1618
HpySE526I	ACGT	1 cut(s)	1876
Hsp92I	GRCGYC	1 cut(s)	1876
Hsp92II	CATG	8 cut(s)	301, 391, 946, 1087, 1484, 1602, 1886, 1985
HspAI	GCGC	9 cut(s)	56, 80, 82, 98, 168, 170, 215, 731, 1044
Kpn2I	TCCGGA	3 cut(s)	477, 586, 1679
KroI	GCCGGC	1 cut(s)	615
KroNI	GCCGGC	1 cut(s)	617
KspAI	GTTAAC	1 cut(s)	756
KspI	CCGCGG	1 cut(s)	200
Kzo9I	GATC	4 cut(s)	807, 837, 1128, 1993
LguI	GCTCTTC	1 cut(s)	1840
Lsp1109I	GCAGC	5 cut(s)	349, 385, 388, 391, 1129
LweI	GCATC	4 cut(s)	559, 1356, 1611, 2001
MaeI	CTAG	6 cut(s)	683, 1053, 1350, 1845, 2121, 2187
MaeII	ACGT	1 cut(s)	1876
MaeIII	GTNAC	4 cut(s)	968, 976, 1444, 1804
MalI	GATC	4 cut(s)	809, 839, 1130, 1995
MbiI	CCGCTC	1 cut(s)	540
MboI	GATC	4 cut(s)	807, 837, 1128, 1993
MhlI	GDGCHC	5 cut(s)	178, 225, 411, 485, 2026
MlyI	GAGTC	5 cut(s)	953, 965, 1023, 1184, 1544
MmeI	TCCRAC	6 cut(s)	644, 1115, 1380, 1541, 1811, 2134
Mph1103I	ATGCAT	1 cut(s)	1604
MroI	TCCGGA	3 cut(s)	477, 586, 1679
MroNI	GCCGGC	1 cut(s)	615
MseI	TTAA	6 cut(s)	35, 399, 755, 1232, 1731, 1859
MslI	CAYNNNNRTG	1 cut(s)	1802
MspA1I	CMGCKG	1 cut(s)	199
MvaI	CCWGG	4 cut(s)	25, 320, 545, 912
NaeI	GCCGGC	1 cut(s)	617
NciI	CCSGG	7 cut(s)	443, 593, 594, 600, 606, 777, 790
NdeII	GATC	4 cut(s)	807, 837, 1128, 1993
NgoMIV	GCCGGC	1 cut(s)	615
NheI	GCTAGC	2 cut(s)	1052, 1349
NlaIII	CATG	8 cut(s)	301, 391, 946, 1087, 1484, 1602, 1886, 1985
NmuCI	GTSAC	3 cut(s)	968, 976, 1804
NsiI	ATGCAT	1 cut(s)	1604
NspI	RCATGY	2 cut(s)	946, 1087
OliI	CACNNNNGTG	1 cut(s)	1802
PasI	CCCWGGG	1 cut(s)	544
PauI	GCGCGC	2 cut(s)	80, 168
PceI	AGGCCT	1 cut(s)	164
PciI	ACATGT	1 cut(s)	942
PciSI	GCTCTTC	1 cut(s)	1840
PcsI	WCGNNNNNNNCGW	4 cut(s)	60, 279, 444, 2083
PdiI	GCCGGC	1 cut(s)	617
PfeI	GAWTC	4 cut(s)	421, 1148, 1484, 1718
PflFI	GACNNNGTC	2 cut(s)	248, 443
PflMI	CCANNNNNTGG	1 cut(s)	1193
Ple19I	CGATCG	1 cut(s)	810
PleI	GAGTC	5 cut(s)	953, 965, 1023, 1183, 1543
PpsI	GAGTC	5 cut(s)	953, 965, 1023, 1183, 1543
PpuMI	RGGWCCY	2 cut(s)	908, 1062
PscI	ACATGT	1 cut(s)	942
PshAI	GACNNNNGTC	1 cut(s)	594
Psp124BI	GAGCTC	3 cut(s)	225, 411, 485
Psp5II	RGGWCCY	2 cut(s)	908, 1062
Psp6I	CCWGG	4 cut(s)	23, 318, 543, 910
PspEI	GGTNACC	1 cut(s)	976
PspFI	CCCAGC	1 cut(s)	261
PspGI	CCWGG	4 cut(s)	23, 318, 543, 910
PspPPI	RGGWCCY	2 cut(s)	908, 1062
PsrI	GAACNNNNNNTAC	2 cut(s)	1287, 1319
PstNI	CAGNNNCTG	2 cut(s)	418, 1123
PsyI	GACNNNGTC	2 cut(s)	248, 443
PteI	GCGCGC	2 cut(s)	80, 168
PvuI	CGATCG	1 cut(s)	810
RseI	CAYNNNNRTG	1 cut(s)	1802
SacI	GAGCTC	3 cut(s)	225, 411, 485
SacII	CCGCGG	1 cut(s)	200
SapI	GCTCTTC	1 cut(s)	1840
SaqAI	TTAA	6 cut(s)	35, 399, 755, 1232, 1731, 1859
Sau3AI	GATC	4 cut(s)	807, 837, 1128, 1993
SchI	GAGTC	5 cut(s)	953, 965, 1023, 1184, 1544
SduI	GDGCHC	5 cut(s)	178, 225, 411, 485, 2026
SfaNI	GCATC	4 cut(s)	559, 1356, 1611, 2001
SfcI	CTRYAG	2 cut(s)	1521, 1608
Sfr303I	CCGCGG	1 cut(s)	200
SgrBI	CCGCGG	1 cut(s)	200
SinI	GGWCC	9 cut(s)	244, 315, 589, 596, 602, 908, 1062, 1161, 2156
SmaI	CCCGGG	1 cut(s)	594
SmiMI	CAYNNNNRTG	1 cut(s)	1802
SmlI	CTYRAG	2 cut(s)	1966, 2095
SmoI	CTYRAG	2 cut(s)	1966, 2095
SseBI	AGGCCT	1 cut(s)	164
SspI	AATATT	2 cut(s)	928, 1579
SspMI	CTAG	6 cut(s)	683, 1053, 1350, 1845, 2121, 2187
SstI	GAGCTC	3 cut(s)	225, 411, 485
StuI	AGGCCT	1 cut(s)	164
StyI	CCWWGG	1 cut(s)	1157
TaaI	ACNGT	3 cut(s)	1022, 1096, 1745
TaiI	ACGT	1 cut(s)	1879
TaqI	TCGA	9 cut(s)	60, 257, 287, 435, 806, 810, 866, 1098, 1433
TauI	GCSGC	5 cut(s)	50, 188, 199, 202, 305
TfiI	GAWTC	4 cut(s)	421, 1148, 1484, 1718
Tru1I	TTAA	6 cut(s)	35, 399, 755, 1232, 1731, 1859
Tru9I	TTAA	6 cut(s)	35, 399, 755, 1232, 1731, 1859
TscAI	CASTG	3 cut(s)	905, 1274, 1335
TseFI	GTSAC	3 cut(s)	968, 976, 1804
TseI	GCWGC	5 cut(s)	337, 373, 376, 379, 1117
Tsp45I	GTSAC	3 cut(s)	968, 976, 1804
TspDTI	ATGAA	7 cut(s)	1290, 1421, 1497, 1587, 1605, 1722, 1884
TspGWI	ACGGA	2 cut(s)	64, 663
TspMI	CCCGGG	1 cut(s)	592
TspRI	CASTG	3 cut(s)	905, 1274, 1335
Tth111I	GACNNNGTC	2 cut(s)	248, 443
Van91I	CCANNNNNTGG	1 cut(s)	1193
VpaK11BI	GGWCC	9 cut(s)	244, 315, 589, 596, 602, 908, 1062, 1161, 2156
XagI	CCTNNNNNAGG	1 cut(s)	158
XapI	RAATTY	3 cut(s)	862, 1594, 1827
XceI	RCATGY	2 cut(s)	946, 1087
XmaI	CCCGGG	1 cut(s)	592
XspI	CTAG	6 cut(s)	683, 1053, 1350, 1845, 2121, 2187
ZraI	GACGTC	1 cut(s)	1877
Zsp2I	ATGCAT	1 cut(s)	1604

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.