Prupe.2G262200_v2.0.a1

membrane protein At1g06890-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0001213
Physical Location & Seq
Forward (+)
27090217 .. 27094560
4344 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G262200.2

Sequence Viewer

Length: 1062 bp
ATGGGGGAGGGCGAGAGGTTTCAGCTGGGGACAGTGGGGGCGTTGACTCTCTCTGTGGTTTCATCGGTCTCCATTGTCATTTGCAACAAGGCGCTCATTAGCTCCTTGGGTTTCACTTTTGCCACAACTTTGACAAGCTGGCATCTTTTAGTCACCTTTTGTTCCCTTCATGTGGCTTTAAAGATGAAATTCTTCGAACACAAGCCTCTTGATCAGAAGACGGTTACGGGGTTTGGCATTTTGAATGGGATCTCAATTGGACTGTTAAATCTGAGCCTGGGGTTCAATTCTGTTGGCTTTTATCAGATGACTAAGCTGGCAATCATCCCTTGTACTGTACTATTGGAGACCCTTTTCCTTGCAAAGAGATTCAGTAGGAGCATTCAGATTGCCCTCCTTGTCCTCCTCCTTGGTGTTGGGATTGCAACAGTTACTGATGTTCAACTCAATGCTCTAGGAAGTGTCTTGTCTCTACTTGCAGTTATTACAACATGCGTTGCTCAGATTATGACGAATACCATCCAGAAGAAGCATAAGGTTTCTTCAACACAACTTTTGTATCAATCATGTCCGTATCAATCAGGAACTTTATTAATCTCTGGCCCATTTCTGGATTGGTTTTTGACCAATCAAAATGTATTTGCTTTCAAGTACACAACTCAAGTTCTGGCTTTCATAATTATATCCTGCCTGATCTCCGTGTCTGTAAATTTTAGCACATTTCTTGTGATTGGAAAGACATCTCCCGTCACCTATCAGGTTCTTGGACATCTGAAGACATGCCTTGTGCTGGCATTTGGTTACCTTCTGCTTCATGATCCATTTGACTGGAGGAACATCCTAGGAATATTGGTTGCACTTATTGGGATGGTTTTATATTCTTATTTTTGTACTCGCGAGAGTCAAAAGAAGGTTTCTGAAGAAGCAACGCAGCCATTGCAGGCTGGGGAAGGCGAATCCGATCGTCTAATAGGTGTGGAAAATGGAAGTGGGGGGGTGGTAACTGATGCTGTTGCTCAAAAGGCCCCTGAATGGAAGTCAAACAAAGATTTGCATGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPT

Protein Analysis

354

Amino Acids

38.37

Weight (kDa)

8.72

Isoelectric Point (pI)

28.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 897
AclWI GGATC 2 cut(s) 257, 812
AcsI RAATTY 2 cut(s) 188, 709
AcuI CTGAAG 2 cut(s) 794, 939
AfaI GTAC 4 cut(s) 334, 339, 653, 892
AfiI CCNNNNNNNGG 4 cut(s) 172, 610, 790, 1032
AgsI TTSAA 5 cut(s) 244, 286, 443, 546, 649
AjnI CCWGG 1 cut(s) 276
AluBI AGCT 4 cut(s) 25, 102, 138, 316
AluI AGCT 4 cut(s) 25, 102, 138, 316
Alw26I GTCTC 3 cut(s) 73, 341, 474
AlwI GGATC 2 cut(s) 257, 812
AlwNI CAGNNNCTG 1 cut(s) 434
AoxI GGCC 2 cut(s) 601, 1023
ApeKI GCWGC 1 cut(s) 931
ApoI RAATTY 2 cut(s) 188, 709
AseI ATTAAT 1 cut(s) 593
Asp700I GAANNNNTTC 1 cut(s) 191
AspA2I CCTAGG 1 cut(s) 841
AspLEI GCGC 1 cut(s) 94
AspS9I GGNCC 2 cut(s) 602, 1024
AsuHPI GGTGA 2 cut(s) 145, 742
AsuII TTCGAA 1 cut(s) 195
AvrII CCTAGG 1 cut(s) 841
BaeI ACNNNNGTAYC 2 cut(s) 542, 575
BbsI GAAGAC 2 cut(s) 224, 782
BbvI GCAGC 1 cut(s) 943
BccI CCATC 2 cut(s) 527, 862
BciT130I CCWGG 1 cut(s) 278
BclI TGATCA 1 cut(s) 211
BcoDI GTCTC 3 cut(s) 73, 341, 474
BfaI CTAG 2 cut(s) 455, 842
BfoI RGCGCY 1 cut(s) 95
BisI GCNGC 1 cut(s) 932
BlnI CCTAGG 1 cut(s) 841
BlsI GCNGC 1 cut(s) 933
Bme1390I CCNGG 1 cut(s) 278
BmgT120I GGNCC 2 cut(s) 602, 1024
BmiI GGNNCC 1 cut(s) 1026
BmrFI CCNGG 1 cut(s) 278
BmsI GCATC 2 cut(s) 151, 997
BpiI GAAGAC 2 cut(s) 224, 782
BpmI CTGGAG 1 cut(s) 850
Bpu14I TTCGAA 1 cut(s) 195
BpuEI CTTGAG 1 cut(s) 645
BsaI GGTCTC 2 cut(s) 73, 341
BsaJI CCNNGG 4 cut(s) 105, 277, 409, 841
Bsc4I CCNNNNNNNGG 4 cut(s) 172, 610, 790, 1032
Bse1I ACTGG 1 cut(s) 833
Bse3DI GCAATG 1 cut(s) 935
BseBI CCWGG 1 cut(s) 278
BseDI CCNNGG 4 cut(s) 105, 277, 409, 841
BseGI GGATG 4 cut(s) 324, 519, 837, 873
BseLI CCNNNNNNNGG 4 cut(s) 172, 610, 790, 1032
BseMI GCAATG 1 cut(s) 935
BseMII CTCAG 2 cut(s) 263, 515
BseNI ACTGG 1 cut(s) 833
BseRI GAGGAG 1 cut(s) 395
BseXI GCAGC 1 cut(s) 943
BseYI CCCAGC 2 cut(s) 25, 944
Bsh1236I CGCG 1 cut(s) 897
Bsh1285I CGRYCG 1 cut(s) 964
BshFI GGCC 2 cut(s) 603, 1025
BsiEI CGRYCG 1 cut(s) 964
BslFI GGGAC 1 cut(s) 43
BslI CCNNNNNNNGG 4 cut(s) 172, 610, 790, 1032
BsmAI GTCTC 3 cut(s) 73, 341, 474
BsmFI GGGAC 1 cut(s) 43
BsmI GAATGC 1 cut(s) 381
BsnI GGCC 2 cut(s) 603, 1025
Bso31I GGTCTC 2 cut(s) 73, 341
Bsp119I TTCGAA 1 cut(s) 195
Bsp143I GATC 5 cut(s) 211, 249, 693, 817, 961
Bsp68I TCGCGA 1 cut(s) 897
BspANI GGCC 2 cut(s) 603, 1025
BspCNI CTCAG 2 cut(s) 264, 514
BspFNI CGCG 1 cut(s) 897
BspHI TCATGA 1 cut(s) 814
BspLI GGNNCC 1 cut(s) 1026
BspPI GGATC 2 cut(s) 257, 812
BspT104I TTCGAA 1 cut(s) 195
BspTNI GGTCTC 2 cut(s) 73, 341
BsrDI GCAATG 1 cut(s) 935
BsrI ACTGG 1 cut(s) 833
BssECI CCNNGG 4 cut(s) 105, 277, 409, 841
BssMI GATC 5 cut(s) 211, 249, 693, 817, 961
BssT1I CCWWGG 3 cut(s) 105, 409, 841
Bst2UI CCWGG 1 cut(s) 278
Bst4CI ACNGT 5 cut(s) 34, 223, 264, 337, 430
BstAPI GCANNNNNTGC 1 cut(s) 937
BstBI TTCGAA 1 cut(s) 195
BstC8I GCNNGC 5 cut(s) 140, 318, 792, 942, 1056
BstDEI CTNAG 3 cut(s) 272, 312, 501
BstEII GGTNACC 1 cut(s) 800
BstF5I GGATG 4 cut(s) 324, 519, 837, 873
BstFNI CGCG 1 cut(s) 897
BstH2I RGCGCY 1 cut(s) 95
BstHHI GCGC 1 cut(s) 94
BstKTI GATC 5 cut(s) 214, 252, 696, 820, 964
BstMAI GTCTC 3 cut(s) 73, 341, 474
BstMBI GATC 5 cut(s) 211, 249, 693, 817, 961
BstMCI CGRYCG 1 cut(s) 964
BstMWI GCNNNNNNNGC 2 cut(s) 937, 1022
BstNI CCWGG 1 cut(s) 278
BstNSI RCATGY 3 cut(s) 495, 783, 1058
BstPI GGTNACC 1 cut(s) 800
BstSCI CCNGG 1 cut(s) 276
BstUI CGCG 1 cut(s) 897
BstV1I GCAGC 1 cut(s) 943
BstV2I GAAGAC 2 cut(s) 224, 782
BstX2I RGATCY 1 cut(s) 249
BstXI CCANNNNNNTGG 1 cut(s) 828
BstYI RGATCY 1 cut(s) 249
BsuRI GGCC 2 cut(s) 603, 1025
BtsCI GGATG 4 cut(s) 324, 519, 837, 873
BtsIMutI CAGTG 1 cut(s) 39
BtuMI TCGCGA 1 cut(s) 897
Cac8I GCNNGC 5 cut(s) 140, 318, 792, 942, 1056
CaiI CAGNNNCTG 1 cut(s) 434
CciI TCATGA 1 cut(s) 814
CfoI GCGC 1 cut(s) 94
Cfr13I GGNCC 2 cut(s) 602, 1024
Csp6I GTAC 4 cut(s) 333, 338, 652, 891
CviAII CATG 6 cut(s) 170, 492, 567, 780, 815, 1055
CviQI GTAC 4 cut(s) 333, 338, 652, 891
DdeI CTNAG 3 cut(s) 272, 312, 501
DpnI GATC 5 cut(s) 213, 251, 695, 819, 963
DpnII GATC 5 cut(s) 211, 249, 693, 817, 961
DraI TTTAAA 1 cut(s) 180
Eco130I CCWWGG 3 cut(s) 105, 409, 841
Eco31I GGTCTC 2 cut(s) 73, 341
Eco57I CTGAAG 2 cut(s) 794, 939
Eco91I GGTNACC 1 cut(s) 800
EcoO109I RGGNCCY 1 cut(s) 1024
EcoO65I GGTNACC 1 cut(s) 800
EcoRII CCWGG 1 cut(s) 276
EcoT14I CCWWGG 3 cut(s) 105, 409, 841
ErhI CCWWGG 3 cut(s) 105, 409, 841
FaeI CATG 6 cut(s) 173, 495, 570, 783, 818, 1058
FaqI GGGAC 1 cut(s) 43
FatI CATG 6 cut(s) 169, 491, 566, 779, 814, 1054
FbaI TGATCA 1 cut(s) 211
Fnu4HI GCNGC 1 cut(s) 932
FokI GGATG 4 cut(s) 311, 506, 824, 880
Fsp4HI GCNGC 1 cut(s) 932
FspBI CTAG 2 cut(s) 455, 842
GlaI GCGC 1 cut(s) 93
GluI GCNGC 1 cut(s) 932
GsaI CCCAGC 2 cut(s) 29, 948
GsuI CTGGAG 1 cut(s) 850
HaeII RGCGCY 1 cut(s) 95
HaeIII GGCC 2 cut(s) 603, 1025
HhaI GCGC 1 cut(s) 94
Hin1II CATG 6 cut(s) 173, 495, 570, 783, 818, 1058
Hin6I GCGC 1 cut(s) 92
HinP1I GCGC 1 cut(s) 92
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HinfI GANTC 4 cut(s) 46, 369, 901, 956
HphI GGTGA 2 cut(s) 145, 742
Hpy166II GTNNAC 2 cut(s) 45, 654
Hpy188I TCNGA 8 cut(s) 216, 273, 306, 387, 504, 774, 919, 961
Hpy188III TCNNGA 6 cut(s) 209, 523, 582, 611, 815, 896
Hpy8I GTNNAC 2 cut(s) 45, 654
HpyAV CCTTC 4 cut(s) 176, 815, 904, 944
HpyCH4III ACNGT 5 cut(s) 34, 223, 264, 337, 430
HpyCH4V TGCA 7 cut(s) 84, 362, 425, 479, 857, 940, 1054
HpyF10VI GCNNNNNNNGC 2 cut(s) 937, 1022
HpyF3I CTNAG 3 cut(s) 272, 312, 501
Hsp92II CATG 6 cut(s) 173, 495, 570, 783, 818, 1058
HspAI GCGC 1 cut(s) 92
Ksp22I TGATCA 1 cut(s) 211
Kzo9I GATC 5 cut(s) 211, 249, 693, 817, 961
LmnI GCTCC 2 cut(s) 107, 378
Lsp1109I GCAGC 1 cut(s) 943
LweI GCATC 2 cut(s) 151, 997
MaeI CTAG 2 cut(s) 455, 842
MaeIII GTNAC 6 cut(s) 151, 223, 430, 748, 800, 1000
MalI GATC 5 cut(s) 213, 251, 695, 819, 963
MboI GATC 5 cut(s) 211, 249, 693, 817, 961
MboII GAAGA 6 cut(s) 184, 229, 534, 538, 787, 932
MfeI CAATTG 1 cut(s) 255
MflI RGATCY 1 cut(s) 249
MluCI AATT 5 cut(s) 188, 255, 286, 678, 709
MlyI GAGTC 2 cut(s) 40, 910
MnlI CCTC 6 cut(s) 9, 216, 404, 413, 416, 825
MroXI GAANNNNTTC 1 cut(s) 191
MseI TTAA 3 cut(s) 179, 266, 593
MspA1I CMGCKG 1 cut(s) 25
MspR9I CCNGG 1 cut(s) 278
MunI CAATTG 1 cut(s) 255
Mva1269I GAATGC 1 cut(s) 381
MvaI CCWGG 1 cut(s) 278
MvnI CGCG 1 cut(s) 897
MwoI GCNNNNNNNGC 2 cut(s) 937, 1022
NdeII GATC 5 cut(s) 211, 249, 693, 817, 961
NlaIII CATG 6 cut(s) 173, 495, 570, 783, 818, 1058
NlaIV GGNNCC 1 cut(s) 1026
NmuCI GTSAC 2 cut(s) 151, 748
NruI TCGCGA 1 cut(s) 897
NspI RCATGY 3 cut(s) 495, 783, 1058
NspV TTCGAA 1 cut(s) 195
PaeI GCATGC 1 cut(s) 1058
PagI TCATGA 1 cut(s) 814
PctI GAATGC 1 cut(s) 381
PdmI GAANNNNTTC 1 cut(s) 191
PfeI GAWTC 2 cut(s) 369, 956
PkrI GCNGC 1 cut(s) 933
Ple19I CGATCG 1 cut(s) 964
PleI GAGTC 2 cut(s) 40, 909
PpsI GAGTC 2 cut(s) 40, 909
PshBI ATTAAT 1 cut(s) 593
Psp6I CCWGG 1 cut(s) 276
PspEI GGTNACC 1 cut(s) 800
PspFI CCCAGC 2 cut(s) 25, 944
PspGI CCWGG 1 cut(s) 276
PspN4I GGNNCC 1 cut(s) 1026
PspPI GGNCC 2 cut(s) 602, 1024
PstNI CAGNNNCTG 1 cut(s) 434
PsuI RGATCY 1 cut(s) 249
PvuI CGATCG 1 cut(s) 964
PvuII CAGCTG 1 cut(s) 25
RruI TCGCGA 1 cut(s) 897
RsaI GTAC 4 cut(s) 334, 339, 653, 892
RsaNI GTAC 4 cut(s) 333, 338, 652, 891
SaqAI TTAA 3 cut(s) 179, 266, 593
SatI GCNGC 1 cut(s) 932
Sau3AI GATC 5 cut(s) 211, 249, 693, 817, 961
Sau96I GGNCC 2 cut(s) 602, 1024
SchI GAGTC 2 cut(s) 40, 910
ScrFI CCNGG 1 cut(s) 278
SfaNI GCATC 2 cut(s) 151, 997
SfuI TTCGAA 1 cut(s) 195
SmlI CTYRAG 1 cut(s) 660
SmoI CTYRAG 1 cut(s) 660
SphI GCATGC 1 cut(s) 1058
Sse9I AATT 5 cut(s) 188, 255, 286, 678, 709
SspI AATATT 1 cut(s) 849
SspMI CTAG 2 cut(s) 455, 842
StyD4I CCNGG 1 cut(s) 276
StyI CCWWGG 3 cut(s) 105, 409, 841
TaaI ACNGT 5 cut(s) 34, 223, 264, 337, 430
TaqI TCGA 1 cut(s) 195
TaqII GACCGA 1 cut(s) 55
TasI AATT 5 cut(s) 188, 255, 286, 678, 709
TatI WGTACW 4 cut(s) 332, 337, 651, 890
TfiI GAWTC 2 cut(s) 369, 956
Tru1I TTAA 3 cut(s) 179, 266, 593
Tru9I TTAA 3 cut(s) 179, 266, 593
TscAI CASTG 1 cut(s) 39
TseFI GTSAC 2 cut(s) 151, 748
TseI GCWGC 1 cut(s) 931
Tsp45I GTSAC 2 cut(s) 151, 748
TspDTI ATGAA 5 cut(s) 51, 158, 200, 664, 803
TspGWI ACGGA 2 cut(s) 561, 688
TspRI CASTG 1 cut(s) 39
VspI ATTAAT 1 cut(s) 593
XapI RAATTY 2 cut(s) 188, 709
XceI RCATGY 3 cut(s) 495, 783, 1058
XcmI CCANNNNNNNNNTGG 1 cut(s) 612
XmaJI CCTAGG 1 cut(s) 841
XmnI GAANNNNTTC 1 cut(s) 191
XspI CTAG 2 cut(s) 455, 842
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.