CEN-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62040 |
| fragaria_vesca | FvH4_7g29150 FvH4_7g29150 |
| malus_domestica | MD01G1198400.v1.1 MD07G1265900.v1.1 |
| prunus_persica | Prupe.2G291900_v2.0.a1 |
| pyrus_communis | pycom01g20860 pycom07g24410 |
| rosa_chinensis | RchiOBHm_Chr1g0376941 RchiOBHm_Chr6g0284341 |
| rosa_laevigata | RLG00000012749 RLG00000026558 |
| rosa_multiflora | Rmu_ssc0000155.1_g000037 |
| rosa_roxburghii | Rroxscaffold_4G00281620 |
| rosa_rugosa | Rorug01G0399600 Rorug06G0162700 |
| rosa_samantha | Rh1AG416900 Rh1BG376300 Rh1CG390100 Rh1DG406900 Rh6BG275800 Rh6BG275900 Rh6DG270500 |
| rosa_wichuraiana | Rw1G036580 Rw6G023700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 284 |
| AccB1I | GGYRCC | 1 cut(s) | 284 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 265 |
| AccI | GTMKAC | 1 cut(s) | 483 |
| AccII | CGCG | 1 cut(s) | 159 |
| AciI | CCGC | 1 cut(s) | 477 |
| AclWI | GGATC | 1 cut(s) | 230 |
| AcoI | YGGCCR | 1 cut(s) | 474 |
| AfaI | GTAC | 1 cut(s) | 286 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 265, 344, 472 |
| AflIII | ACRYGT | 1 cut(s) | 360 |
| AgsI | TTSAA | 3 cut(s) | 376, 430, 490 |
| AjnI | CCWGG | 1 cut(s) | 280 |
| AluBI | AGCT | 4 cut(s) | 60, 127, 413, 512 |
| AluI | AGCT | 4 cut(s) | 60, 127, 413, 512 |
| Alw21I | GWGCWC | 1 cut(s) | 129 |
| AlwI | GGATC | 1 cut(s) | 230 |
| AoxI | GGCC | 3 cut(s) | 335, 463, 474 |
| ApeKI | GCWGC | 2 cut(s) | 188, 509 |
| Asp718I | GGTACC | 1 cut(s) | 284 |
| AspS9I | GGNCC | 2 cut(s) | 211, 407 |
| AsuHPI | GGTGA | 2 cut(s) | 55, 185 |
| AvaII | GGWCC | 2 cut(s) | 211, 407 |
| BanI | GGYRCC | 1 cut(s) | 284 |
| BanII | GRGCYC | 1 cut(s) | 129 |
| Bbv12I | GWGCWC | 1 cut(s) | 129 |
| BbvI | GCAGC | 2 cut(s) | 175, 521 |
| BccI | CCATC | 2 cut(s) | 4, 259 |
| BciT130I | CCWGG | 1 cut(s) | 282 |
| BciVI | GTATCC | 1 cut(s) | 359 |
| BfaI | CTAG | 1 cut(s) | 513 |
| BfmI | CTRYAG | 1 cut(s) | 507 |
| BfuI | GTATCC | 1 cut(s) | 359 |
| BisI | GCNGC | 3 cut(s) | 189, 477, 510 |
| BlsI | GCNGC | 3 cut(s) | 190, 478, 511 |
| Bme1390I | CCNGG | 1 cut(s) | 282 |
| Bme18I | GGWCC | 2 cut(s) | 211, 407 |
| BmgT120I | GGNCC | 2 cut(s) | 211, 407 |
| BmiI | GGNNCC | 3 cut(s) | 18, 213, 286 |
| BmrFI | CCNGG | 1 cut(s) | 282 |
| BmrI | ACTGGG | 1 cut(s) | 225 |
| BmsI | GCATC | 2 cut(s) | 283, 305 |
| BmuI | ACTGGG | 1 cut(s) | 225 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 240, 272 |
| BpuEI | CTTGAG | 1 cut(s) | 265 |
| BsaAI | YACGTR | 1 cut(s) | 361 |
| BsaJI | CCNNGG | 1 cut(s) | 332 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 36, 66 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 265, 344, 472 |
| Bse118I | RCCGGY | 1 cut(s) | 337 |
| Bse1I | ACTGG | 1 cut(s) | 231 |
| BseBI | CCWGG | 1 cut(s) | 282 |
| BseDI | CCNNGG | 1 cut(s) | 332 |
| BseGI | GGATG | 3 cut(s) | 15, 270, 296 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 265, 344, 472 |
| BseNI | ACTGG | 1 cut(s) | 231 |
| BseXI | GCAGC | 2 cut(s) | 175, 521 |
| Bsh1236I | CGCG | 1 cut(s) | 159 |
| BshFI | GGCC | 3 cut(s) | 337, 465, 476 |
| BshNI | GGYRCC | 1 cut(s) | 284 |
| BsiHKAI | GWGCWC | 1 cut(s) | 129 |
| BsiSI | CCGG | 1 cut(s) | 338 |
| BslFI | GGGAC | 1 cut(s) | 434 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 265, 344, 472 |
| BsmFI | GGGAC | 1 cut(s) | 434 |
| BsnI | GGCC | 3 cut(s) | 337, 465, 476 |
| Bsp1286I | GDGCHC | 1 cut(s) | 129 |
| Bsp143I | GATC | 2 cut(s) | 165, 235 |
| BspACI | CCGC | 1 cut(s) | 477 |
| BspANI | GGCC | 3 cut(s) | 337, 465, 476 |
| BspFNI | CGCG | 1 cut(s) | 159 |
| BspLI | GGNNCC | 3 cut(s) | 18, 213, 286 |
| BspMAI | CTGCAG | 1 cut(s) | 511 |
| BspPI | GGATC | 1 cut(s) | 230 |
| BspT107I | GGYRCC | 1 cut(s) | 284 |
| BsrFI | RCCGGY | 1 cut(s) | 337 |
| BsrI | ACTGG | 1 cut(s) | 231 |
| BssAI | RCCGGY | 1 cut(s) | 337 |
| BssECI | CCNNGG | 1 cut(s) | 332 |
| BssMI | GATC | 2 cut(s) | 165, 235 |
| BssT1I | CCWWGG | 1 cut(s) | 332 |
| Bst2UI | CCWGG | 1 cut(s) | 282 |
| Bst4CI | ACNGT | 1 cut(s) | 400 |
| Bst6I | CTCTTC | 1 cut(s) | 385 |
| BstBAI | YACGTR | 1 cut(s) | 361 |
| BstC8I | GCNNGC | 1 cut(s) | 415 |
| BstF5I | GGATG | 3 cut(s) | 15, 270, 296 |
| BstFNI | CGCG | 1 cut(s) | 159 |
| BstKTI | GATC | 2 cut(s) | 168, 238 |
| BstMBI | GATC | 2 cut(s) | 165, 235 |
| BstNI | CCWGG | 1 cut(s) | 282 |
| BstSCI | CCNGG | 1 cut(s) | 280 |
| BstSFI | CTRYAG | 1 cut(s) | 507 |
| BstUI | CGCG | 1 cut(s) | 159 |
| BstV1I | GCAGC | 2 cut(s) | 175, 521 |
| BsuI | GTATCC | 1 cut(s) | 359 |
| BsuRI | GGCC | 3 cut(s) | 337, 465, 476 |
| BtsCI | GGATG | 3 cut(s) | 15, 270, 296 |
| BtsIMutI | CAGTG | 3 cut(s) | 238, 288, 405 |
| Cac8I | GCNNGC | 1 cut(s) | 415 |
| Cfr10I | RCCGGY | 1 cut(s) | 337 |
| Cfr13I | GGNCC | 2 cut(s) | 211, 407 |
| Csp6I | GTAC | 1 cut(s) | 285 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 29 |
| CviAII | CATG | 3 cut(s) | 122, 130, 181 |
| CviQI | GTAC | 1 cut(s) | 285 |
| DpnI | GATC | 2 cut(s) | 167, 237 |
| DpnII | GATC | 2 cut(s) | 165, 235 |
| EaeI | YGGCCR | 1 cut(s) | 474 |
| Eam1104I | CTCTTC | 1 cut(s) | 385 |
| EarI | CTCTTC | 1 cut(s) | 385 |
| Ecl136II | GAGCTC | 1 cut(s) | 127 |
| Eco130I | CCWWGG | 1 cut(s) | 332 |
| Eco24I | GRGCYC | 1 cut(s) | 129 |
| Eco47I | GGWCC | 2 cut(s) | 211, 407 |
| Eco53kI | GAGCTC | 1 cut(s) | 127 |
| EcoICRI | GAGCTC | 1 cut(s) | 127 |
| EcoRII | CCWGG | 1 cut(s) | 280 |
| EcoT14I | CCWWGG | 1 cut(s) | 332 |
| EcoT22I | ATGCAT | 1 cut(s) | 298 |
| EcoT38I | GRGCYC | 1 cut(s) | 129 |
| ErhI | CCWWGG | 1 cut(s) | 332 |
| FaeI | CATG | 3 cut(s) | 125, 133, 184 |
| FaiI | YATR | 6 cut(s) | 123, 131, 182, 195, 317, 324 |
| FaqI | GGGAC | 1 cut(s) | 434 |
| FatI | CATG | 3 cut(s) | 121, 129, 180 |
| FblI | GTMKAC | 1 cut(s) | 483 |
| Fnu4HI | GCNGC | 3 cut(s) | 189, 477, 510 |
| FokI | GGATG | 3 cut(s) | 22, 277, 283 |
| FriOI | GRGCYC | 1 cut(s) | 129 |
| Fsp4HI | GCNGC | 3 cut(s) | 189, 477, 510 |
| FspBI | CTAG | 1 cut(s) | 513 |
| GluI | GCNGC | 3 cut(s) | 189, 477, 510 |
| HaeIII | GGCC | 3 cut(s) | 337, 465, 476 |
| HapII | CCGG | 1 cut(s) | 338 |
| Hin1II | CATG | 3 cut(s) | 125, 133, 184 |
| HinfI | GANTC | 1 cut(s) | 25 |
| HpaII | CCGG | 1 cut(s) | 338 |
| HphI | GGTGA | 2 cut(s) | 55, 185 |
| Hpy166II | GTNNAC | 3 cut(s) | 55, 91, 484 |
| Hpy8I | GTNNAC | 3 cut(s) | 55, 91, 484 |
| HpyAV | CCTTC | 2 cut(s) | 144, 476 |
| HpyCH4III | ACNGT | 1 cut(s) | 400 |
| HpyCH4IV | ACGT | 1 cut(s) | 360 |
| HpyCH4V | TGCA | 3 cut(s) | 296, 417, 509 |
| HpySE526I | ACGT | 1 cut(s) | 360 |
| Hsp92II | CATG | 3 cut(s) | 125, 133, 184 |
| KpnI | GGTACC | 1 cut(s) | 288 |
| Kzo9I | GATC | 2 cut(s) | 165, 235 |
| LmnI | GCTCC | 1 cut(s) | 16 |
| LpnPI | CCDG | 9 cut(s) | 228, 244, 267, 294, 351, 380, 403, 423, 483 |
| Lsp1109I | GCAGC | 2 cut(s) | 175, 521 |
| LweI | GCATC | 2 cut(s) | 283, 305 |
| MaeI | CTAG | 1 cut(s) | 513 |
| MaeII | ACGT | 1 cut(s) | 360 |
| MaeIII | GTNAC | 2 cut(s) | 173, 268 |
| MalI | GATC | 2 cut(s) | 167, 237 |
| MboI | GATC | 2 cut(s) | 165, 235 |
| MboII | GAAGA | 1 cut(s) | 402 |
| MhlI | GDGCHC | 1 cut(s) | 129 |
| MluCI | AATT | 1 cut(s) | 424 |
| MlyI | GAGTC | 1 cut(s) | 19 |
| MnlI | CCTC | 5 cut(s) | 40, 165, 177, 378, 398 |
| Mph1103I | ATGCAT | 1 cut(s) | 298 |
| MseI | TTAA | 1 cut(s) | 200 |
| MspA1I | CMGCKG | 1 cut(s) | 479 |
| MspI | CCGG | 1 cut(s) | 338 |
| MspR9I | CCNGG | 1 cut(s) | 282 |
| MvaI | CCWGG | 1 cut(s) | 282 |
| MvnI | CGCG | 1 cut(s) | 159 |
| NdeII | GATC | 2 cut(s) | 165, 235 |
| NlaIII | CATG | 3 cut(s) | 125, 133, 184 |
| NlaIV | GGNNCC | 3 cut(s) | 18, 213, 286 |
| NmuCI | GTSAC | 2 cut(s) | 173, 268 |
| NsiI | ATGCAT | 1 cut(s) | 298 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 174 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 265 |
| PkrI | GCNGC | 3 cut(s) | 190, 478, 511 |
| PleI | GAGTC | 1 cut(s) | 19 |
| PpsI | GAGTC | 1 cut(s) | 19 |
| Ppu21I | YACGTR | 1 cut(s) | 361 |
| Psp124BI | GAGCTC | 1 cut(s) | 129 |
| Psp6I | CCWGG | 1 cut(s) | 280 |
| PspGI | CCWGG | 1 cut(s) | 280 |
| PspN4I | GGNNCC | 3 cut(s) | 18, 213, 286 |
| PspPI | GGNCC | 2 cut(s) | 211, 407 |
| PstI | CTGCAG | 1 cut(s) | 511 |
| RsaI | GTAC | 1 cut(s) | 286 |
| RsaNI | GTAC | 1 cut(s) | 285 |
| SacI | GAGCTC | 1 cut(s) | 129 |
| SaqAI | TTAA | 1 cut(s) | 200 |
| SatI | GCNGC | 3 cut(s) | 189, 477, 510 |
| Sau3AI | GATC | 2 cut(s) | 165, 235 |
| Sau96I | GGNCC | 2 cut(s) | 211, 407 |
| SchI | GAGTC | 1 cut(s) | 19 |
| ScrFI | CCNGG | 1 cut(s) | 282 |
| SduI | GDGCHC | 1 cut(s) | 129 |
| SetI | ASST | 9 cut(s) | 51, 62, 129, 157, 200, 363, 409, 415, 514 |
| SfaNI | GCATC | 2 cut(s) | 283, 305 |
| SfcI | CTRYAG | 1 cut(s) | 507 |
| SinI | GGWCC | 2 cut(s) | 211, 407 |
| SmlI | CTYRAG | 1 cut(s) | 244 |
| SmoI | CTYRAG | 1 cut(s) | 244 |
| Sse9I | AATT | 1 cut(s) | 424 |
| SsiI | CCGC | 1 cut(s) | 477 |
| SspMI | CTAG | 1 cut(s) | 513 |
| SstI | GAGCTC | 1 cut(s) | 129 |
| StyD4I | CCNGG | 1 cut(s) | 280 |
| StyI | CCWWGG | 1 cut(s) | 332 |
| TaaI | ACNGT | 1 cut(s) | 400 |
| TaiI | ACGT | 1 cut(s) | 363 |
| TasI | AATT | 1 cut(s) | 424 |
| TauI | GCSGC | 1 cut(s) | 479 |
| Tru1I | TTAA | 1 cut(s) | 200 |
| Tru9I | TTAA | 1 cut(s) | 200 |
| TscAI | CASTG | 3 cut(s) | 238, 295, 405 |
| TseFI | GTSAC | 2 cut(s) | 173, 268 |
| TseI | GCWGC | 2 cut(s) | 188, 509 |
| Tsp45I | GTSAC | 2 cut(s) | 173, 268 |
| TspDTI | ATGAA | 2 cut(s) | 95, 339 |
| TspGWI | ACGGA | 1 cut(s) | 224 |
| TspRI | CASTG | 3 cut(s) | 238, 295, 405 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 265 |
| VpaK11BI | GGWCC | 2 cut(s) | 211, 407 |
| XmiI | GTMKAC | 1 cut(s) | 483 |
| XspI | CTAG | 1 cut(s) | 513 |
| Zsp2I | ATGCAT | 1 cut(s) | 298 |