Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0006050

Physical Location & Seq

Genomic Coordinates Forward (+)

7521382 .. 7523749

Gene Structure 2368 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G098100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGGACTACTCATCTGCTGCATATGATGATACTTCTTTGGATCTTAATACCAAGCCTCTCCGACTTTTCGATGATACTCCGATCAAGAAAGAGGTGCATAGCAAAATATTGATTGACTTTGGGAGGCAGCTTTCAGCAAATGAAGAGAGTGGTGCTCTATTGGAGGAATTGCAACGGGTGAGTGCAGAGAACAAGAAGCTAACCGAAATGTTGACGGTGATGGGTGAGAGCTACAATGCTTTAAGAAGCCAGTTGCTGGATTACATGAGCAAGAACCCAGAGAAGGAGCTTAGCCCAATTTCAAAGAAAAGAAAGTCTGAAAGCAGTAACAACACCAACACCAACACCAACACCAACAGCAACAATATCATCAACGGAGCAGTGAATGGAAACTCTGAGAGCAGCTCCAGTGATGGAGAATCTTGCAAGAAACCAAGGGAAGAGACCATCAAGGCAAAGATTTCAAGGGCTTATGTTCGTACCGAAGCATCAGATACAACAAGCCTGGTTGTGAAGGATGGATATCAATGGAGAAAATATGGCCAAAAAGTTACTAGGGATAATCCTTGTCCTAGAGCTTACTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTGCAGAGAAGTGTTGAAGATCAATCTATTCTGGTGGCAACTTATGAAGGTGAACACAATCATTCCCACCCTTCTCAAATTGAAGCAACATCAGGCTCAAACCGCGGCATGACCTTAGGATCAGTCCCCTCCTCAAGCTCCCTTGCCTCATCTGGACCTACCATCACTCTTGACTTGACCAAATCCAAGTCCAGTGCTGATACCAAAAGTACAAAAACAAGAACCGAAACACCAGAAGTTCGAAAGTTTTTGGTGGAGCAGATGGCTTCTTCCTTGACAAAAGATCCCGATTTCACGAAAGCACTAGCAGCAGCCATTTCAGGAAGAATACTTCAACATAATTCTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0002237 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009751 GO:0009889 GO:0009890 GO:0009892 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046677 GO:0048519 GO:0048523 GO:0048583 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

325

Amino Acids

35.66

Weight (kDa)

8.82

Isoelectric Point (pI)

43.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80840 AT2G25000 AT2G25000 AT2G25000 AT2G25000 AT3G32090 AT4G31800 AT4G31800 AT4G31800
fragaria_vesca	FvH4_6g28650 FvH4_6g28650 FvH4_6g28650
malus_domestica	MD09G1224500.v1.1 MD17G1223100.v1.1
prunus_persica	Prupe.3G098100_v2.0.a1
pyrus_communis	pycom09g14410 pycom17g22700
rosa_chinensis	RchiOBHm_Chr2g0133001
rosa_laevigata	RLG00000019302
rosa_multiflora	Rmu_sc0000341.1_g000003
rosa_roxburghii	Rroxscaffold_2G00111570
rosa_rugosa	Rorug02G0309200
rosa_samantha	Rh2AG361500 Rh2BG367200 Rh2CG344700 Rh2DG384200
rosa_wichuraiana	Rw2G029400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	256
AccII	CGCG	1 cut(s)	729
AciI	CCGC	2 cut(s)	727, 729
AclWI	GGATC	3 cut(s)	48, 751, 902
AcoI	YGGCCR	1 cut(s)	541
AfaI	GTAC	2 cut(s)	481, 835
AfiI	CCNNNNNNNGG	2 cut(s)	256, 283
AgsI	TTSAA	6 cut(s)	303, 465, 586, 641, 707, 959
AjnI	CCWGG	1 cut(s)	504
AluBI	AGCT	8 cut(s)	130, 199, 231, 289, 405, 578, 606, 762
AluI	AGCT	8 cut(s)	130, 199, 231, 289, 405, 578, 606, 762
Alw21I	GWGCWC	1 cut(s)	157
Alw26I	GTCTC	1 cut(s)	437
AlwI	GGATC	3 cut(s)	48, 751, 902
AlwNI	CAGNNNCTG	1 cut(s)	256
AoxI	GGCC	1 cut(s)	541
ApeKI	GCWGC	6 cut(s)	17, 127, 402, 606, 932, 935
AspS9I	GGNCC	1 cut(s)	779
AsuHPI	GGTGA	4 cut(s)	190, 229, 236, 686
AsuII	TTCGAA	1 cut(s)	865
AvaII	GGWCC	1 cut(s)	779
AxyI	CCTNAGG	1 cut(s)	739
BalI	TGGCCA	1 cut(s)	543
Bbv12I	GWGCWC	1 cut(s)	157
BbvI	GCAGC	6 cut(s)	4, 139, 414, 593, 944, 947
BccI	CCATC	6 cut(s)	214, 407, 455, 512, 794, 880
BciT130I	CCWGG	1 cut(s)	506
BcoDI	GTCTC	1 cut(s)	437
BfaI	CTAG	3 cut(s)	555, 573, 929
BisI	GCNGC	7 cut(s)	18, 128, 403, 607, 730, 933, 936
BlpI	GCTNAGC	1 cut(s)	290
BlsI	GCNGC	7 cut(s)	19, 129, 404, 608, 731, 934, 937
Bme1390I	CCNGG	1 cut(s)	506
Bme18I	GGWCC	1 cut(s)	779
BmgT120I	GGNCC	1 cut(s)	779
BmrFI	CCNGG	1 cut(s)	506
BmsI	GCATC	1 cut(s)	497
BplI	GAGNNNNNCTC	4 cut(s)	139, 171, 389, 421
BpmI	CTGGAG	1 cut(s)	391
Bpu1102I	GCTNAGC	1 cut(s)	290
Bpu14I	TTCGAA	1 cut(s)	865
BpuEI	CTTGAG	1 cut(s)	742
BsaBI	GATNNNNATC	1 cut(s)	522
BsaI	GGTCTC	1 cut(s)	437
BsaJI	CCNNGG	2 cut(s)	434, 727
Bsc4I	CCNNNNNNNGG	2 cut(s)	256, 283
Bse1I	ACTGG	3 cut(s)	250, 408, 816
Bse21I	CCTNAGG	1 cut(s)	739
Bse8I	GATNNNNATC	1 cut(s)	522
BseBI	CCWGG	1 cut(s)	506
BseDI	CCNNGG	2 cut(s)	434, 727
BseGI	GGATG	1 cut(s)	523
BseJI	GATNNNNATC	1 cut(s)	522
BseLI	CCNNNNNNNGG	2 cut(s)	256, 283
BseMII	CTCAG	1 cut(s)	387
BseNI	ACTGG	3 cut(s)	250, 408, 816
BseRI	GAGGAG	1 cut(s)	745
BseXI	GCAGC	6 cut(s)	4, 139, 414, 593, 944, 947
BsgI	GTGCAG	2 cut(s)	204, 647
Bsh1236I	CGCG	1 cut(s)	729
BshFI	GGCC	1 cut(s)	543
BsiHKAI	GWGCWC	1 cut(s)	157
BslFI	GGGAC	1 cut(s)	734
BslI	CCNNNNNNNGG	2 cut(s)	256, 283
BsmAI	GTCTC	1 cut(s)	437
BsmFI	GGGAC	1 cut(s)	734
BsnI	GGCC	1 cut(s)	543
Bso31I	GGTCTC	1 cut(s)	437
Bsp119I	TTCGAA	1 cut(s)	865
Bsp1286I	GDGCHC	1 cut(s)	157
Bsp143I	GATC	5 cut(s)	40, 81, 643, 743, 907
Bsp1720I	GCTNAGC	1 cut(s)	290
BspACI	CCGC	2 cut(s)	727, 729
BspANI	GGCC	1 cut(s)	543
BspCNI	CTCAG	1 cut(s)	388
BspFNI	CGCG	1 cut(s)	729
BspPI	GGATC	3 cut(s)	48, 751, 902
BspT104I	TTCGAA	1 cut(s)	865
BspTNI	GGTCTC	1 cut(s)	437
BsrI	ACTGG	3 cut(s)	250, 408, 816
BssECI	CCNNGG	2 cut(s)	434, 727
BssMI	GATC	5 cut(s)	40, 81, 643, 743, 907
BssT1I	CCWWGG	1 cut(s)	434
Bst2UI	CCWGG	1 cut(s)	506
Bst4CI	ACNGT	1 cut(s)	217
Bst6I	CTCTTC	2 cut(s)	138, 435
BstBI	TTCGAA	1 cut(s)	865
BstDEI	CTNAG	3 cut(s)	290, 396, 739
BstDSI	CCRYGG	1 cut(s)	727
BstF5I	GGATG	1 cut(s)	523
BstFNI	CGCG	1 cut(s)	729
BstKTI	GATC	5 cut(s)	43, 84, 646, 746, 910
BstMAI	GTCTC	1 cut(s)	437
BstMBI	GATC	5 cut(s)	40, 81, 643, 743, 907
BstMWI	GCNNNNNNNGC	2 cut(s)	726, 932
BstNI	CCWGG	1 cut(s)	506
BstSCI	CCNGG	1 cut(s)	504
BstUI	CGCG	1 cut(s)	729
BstV1I	GCAGC	6 cut(s)	4, 139, 414, 593, 944, 947
BstX2I	RGATCY	2 cut(s)	40, 907
BstYI	RGATCY	2 cut(s)	40, 907
Bsu36I	CCTNAGG	1 cut(s)	739
BsuRI	GGCC	1 cut(s)	543
BtgI	CCRYGG	1 cut(s)	727
BtsCI	GGATG	1 cut(s)	523
BtsI	GCAGTG	1 cut(s)	387
BtsIMutI	CAGTG	3 cut(s)	387, 415, 823
CaiI	CAGNNNCTG	1 cut(s)	256
Cfr13I	GGNCC	1 cut(s)	779
Cfr42I	CCGCGG	1 cut(s)	730
Csp6I	GTAC	2 cut(s)	480, 834
CviAII	CATG	2 cut(s)	265, 733
CviQI	GTAC	2 cut(s)	480, 834
DdeI	CTNAG	3 cut(s)	290, 396, 739
DpnI	GATC	5 cut(s)	42, 83, 645, 745, 909
DpnII	GATC	5 cut(s)	40, 81, 643, 743, 907
EaeI	YGGCCR	1 cut(s)	541
Eam1104I	CTCTTC	2 cut(s)	138, 435
EarI	CTCTTC	2 cut(s)	138, 435
Eco130I	CCWWGG	1 cut(s)	434
Eco31I	GGTCTC	1 cut(s)	437
Eco32I	GATATC	1 cut(s)	524
Eco47I	GGWCC	1 cut(s)	779
Eco81I	CCTNAGG	1 cut(s)	739
EcoRII	CCWGG	1 cut(s)	504
EcoRV	GATATC	1 cut(s)	524
EcoT14I	CCWWGG	1 cut(s)	434
ErhI	CCWWGG	1 cut(s)	434
FaeI	CATG	2 cut(s)	268, 736
FaiI	YATR	9 cut(s)	22, 24, 99, 266, 474, 540, 669, 734, 963
FaqI	GGGAC	1 cut(s)	734
FatI	CATG	2 cut(s)	264, 732
FauNDI	CATATG	1 cut(s)	22
Fnu4HI	GCNGC	7 cut(s)	18, 128, 403, 607, 730, 933, 936
FokI	GGATG	1 cut(s)	530
Fsp4HI	GCNGC	7 cut(s)	18, 128, 403, 607, 730, 933, 936
FspBI	CTAG	3 cut(s)	555, 573, 929
GluI	GCNGC	7 cut(s)	18, 128, 403, 607, 730, 933, 936
GsuI	CTGGAG	1 cut(s)	391
HaeIII	GGCC	1 cut(s)	543
Hin1II	CATG	2 cut(s)	268, 736
HincII	GTYRAC	1 cut(s)	213
HindII	GTYRAC	1 cut(s)	213
HinfI	GANTC	1 cut(s)	419
HphI	GGTGA	4 cut(s)	190, 229, 236, 686
Hpy166II	GTNNAC	2 cut(s)	213, 677
Hpy188I	TCNGA	5 cut(s)	62, 81, 319, 397, 493
Hpy188III	TCNNGA	6 cut(s)	85, 777, 794, 911, 919, 945
Hpy8I	GTNNAC	2 cut(s)	213, 677
HpyAV	CCTTC	5 cut(s)	277, 508, 616, 665, 705
HpyCH4III	ACNGT	1 cut(s)	217
HpyCH4V	TGCA	6 cut(s)	20, 97, 172, 185, 426, 628
HpyF10VI	GCNNNNNNNGC	2 cut(s)	726, 932
HpyF3I	CTNAG	3 cut(s)	290, 396, 739
Hsp92II	CATG	2 cut(s)	268, 736
KspI	CCGCGG	1 cut(s)	730
Kzo9I	GATC	5 cut(s)	40, 81, 643, 743, 907
LmnI	GCTCC	6 cut(s)	286, 377, 410, 604, 767, 880
Lsp1109I	GCAGC	6 cut(s)	4, 139, 414, 593, 944, 947
LweI	GCATC	1 cut(s)	497
MaeI	CTAG	3 cut(s)	555, 573, 929
MaeIII	GTNAC	2 cut(s)	326, 550
MalI	GATC	5 cut(s)	42, 83, 645, 745, 909
MboI	GATC	5 cut(s)	40, 81, 643, 743, 907
MboII	GAAGA	5 cut(s)	155, 452, 653, 885, 960
MflI	RGATCY	2 cut(s)	40, 907
MhlI	GDGCHC	1 cut(s)	157
MlsI	TGGCCA	1 cut(s)	543
MluCI	AATT	4 cut(s)	167, 297, 702, 964
MluNI	TGGCCA	1 cut(s)	543
MmeI	TCCRAC	1 cut(s)	85
MnlI	CCTC	7 cut(s)	66, 85, 117, 157, 763, 766, 781
Mox20I	TGGCCA	1 cut(s)	543
MscI	TGGCCA	1 cut(s)	543
MseI	TTAA	2 cut(s)	45, 242
Msp20I	TGGCCA	1 cut(s)	543
MspA1I	CMGCKG	1 cut(s)	729
MspR9I	CCNGG	1 cut(s)	506
MvaI	CCWGG	1 cut(s)	506
MvnI	CGCG	1 cut(s)	729
MwoI	GCNNNNNNNGC	2 cut(s)	726, 932
NdeI	CATATG	1 cut(s)	22
NdeII	GATC	5 cut(s)	40, 81, 643, 743, 907
NlaIII	CATG	2 cut(s)	268, 736
NspV	TTCGAA	1 cut(s)	865
PfeI	GAWTC	1 cut(s)	419
PflMI	CCANNNNNTGG	1 cut(s)	256
PkrI	GCNGC	7 cut(s)	19, 129, 404, 608, 731, 934, 937
Psp6I	CCWGG	1 cut(s)	504
PspGI	CCWGG	1 cut(s)	504
PspPI	GGNCC	1 cut(s)	779
PstNI	CAGNNNCTG	1 cut(s)	256
PsuI	RGATCY	2 cut(s)	40, 907
RsaI	GTAC	2 cut(s)	481, 835
RsaNI	GTAC	2 cut(s)	480, 834
SacII	CCGCGG	1 cut(s)	730
SaqAI	TTAA	2 cut(s)	45, 242
SatI	GCNGC	7 cut(s)	18, 128, 403, 607, 730, 933, 936
Sau3AI	GATC	5 cut(s)	40, 81, 643, 743, 907
Sau96I	GGNCC	1 cut(s)	779
ScrFI	CCNGG	1 cut(s)	506
SduI	GDGCHC	1 cut(s)	157
SfaNI	GCATC	1 cut(s)	497
Sfr303I	CCGCGG	1 cut(s)	730
SfuI	TTCGAA	1 cut(s)	865
SgrBI	CCGCGG	1 cut(s)	730
SinI	GGWCC	1 cut(s)	779
SmlI	CTYRAG	1 cut(s)	757
SmoI	CTYRAG	1 cut(s)	757
Sse9I	AATT	4 cut(s)	167, 297, 702, 964
SsiI	CCGC	2 cut(s)	727, 729
SspI	AATATT	1 cut(s)	108
SspMI	CTAG	3 cut(s)	555, 573, 929
StyD4I	CCNGG	1 cut(s)	504
StyI	CCWWGG	1 cut(s)	434
TaaI	ACNGT	1 cut(s)	217
TaqI	TCGA	2 cut(s)	69, 865
TasI	AATT	4 cut(s)	167, 297, 702, 964
TatI	WGTACW	1 cut(s)	833
TauI	GCSGC	1 cut(s)	732
TfiI	GAWTC	1 cut(s)	419
Tru1I	TTAA	2 cut(s)	45, 242
Tru9I	TTAA	2 cut(s)	45, 242
TscAI	CASTG	3 cut(s)	387, 415, 823
TseI	GCWGC	6 cut(s)	17, 127, 402, 606, 932, 935
TspDTI	ATGAA	2 cut(s)	156, 684
TspGWI	ACGGA	1 cut(s)	390
TspRI	CASTG	3 cut(s)	387, 415, 823
Van91I	CCANNNNNTGG	1 cut(s)	256
VpaK11BI	GGWCC	1 cut(s)	779
XspI	CTAG	3 cut(s)	555, 573, 929

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.