Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0001943

Physical Location & Seq

Genomic Coordinates Forward (+)

18776680 .. 18784516

Gene Structure 7837 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G168800.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3099 bp

ATGGGAACTGATGATTTTTCATTTCCAAAGTTGCTTCTTGCATACCTCATATGCTCCACTGCATTTTTGTTCTTTGCAACTTTTGGACAGTCAGCCACAGCCACAGCCAAGCTTCACAGTCAGGAAGTGAATGCATTGAAAGAGATAGGGAAAAAGCTGGGGAAGAAAGACTGGGATTTTAGGAAAGATCCATGTACAGGAGAAGGGAATTGGAATGTGTCGATTGAAGGGAGGAGGAAAGGCTTTGAGAGCTCTGTCGCATGTAACTGCACCTTCAACCACAATTCCTCTTGCCACGTCATCAGCATAGCTCTAAAGGCCCAGAATCTATCAGGTACTGTGCCACCAGAATTTTCTAAGCTTCAGCACCTGAAAGACTTAGACCTGAGTCGAAATTACCTCAATGGTTCTATACCTTCCCAATGGGGTACTATGCGCTTGGTTACGCTCTCCCTTATGGGAAACAGATTGTCCGGTCCATTTCCAAAAGTTCTCACCAATATCACCACTCTCAGAAACTTGAGCATTGAAGGAAACCACTTTTCGGGACCCATTCCACCGGAAATTGGGAAGTTGATCAAGTTAGAAAAGCTCATTGTATCTTCAAATGCCTTCACTGGAGAATTGCCATTAGCACTAGCAAAGTTGACCAACTTGTCTGATATGAGGATATGTGACAATAACTTCTCTGGAAAGATACCTGATTTCATCGGAAATTGGACACGGATTTCAAAATTGCATATCCAGGGTAGCTCTCTTGAGGGGCCTATACCTTCTAGCATATCAGGCTTAAGAAGTTTAACTGATCTGAGGATAACCGACTTGAGAGGTACAGAGTCTCCTTTCCCATCGTTGAGAAATTTGGAATCCTTGAAAACACTGATACTGAGGAATTGCTTGATATACGGAGTGATCCCAGCTTATATTGCTGATATGAAAAGATTGAAAAACCTAGACCTCAGCTACAATGAGCTGACCGGTGAAATACCTGCATCTTTTGTCCAACTAGCAAAAGTTGACTTCACGTATTTGACAGGAAACCAGCTTACTGGAACTGTACCTGGATGGGTCCCAGGAAGAAACAATATTGTGGATTTATCGTACAACAACTTCACTTGGGAAAGCTCAAGTCCTAATGAATGTCCTAGAGGGAGTGTAAACTTAGTAGAGAGTTACTCCTCGTCAGCTGATAAATCAAGTAGAATCCAACCATGCCTGGAAAGAAATTTTCCTTGTCATGTTTCAAAAAATCAACGTAAATATTCCTTGCATATCAACTGTGGTGGAAAGGAAGTAAATATTGGTGGAAACAGGTATGAAGCTGATAGAGAACAAAGAGGTGCTTCCATGTATTACATGGGTCAGAACTGGGCTCTCAGCAGCACAGGGAACTTCATGGACAATGATATTGATTCAGATATCTACATTGAAACCAACAAGTCTGCACTTTCAAAAAATGTCTCTGTGCTCGATTCAGAACTGTACACGACCGCACGTGGATCTCCCATCTCTCTCACATACTATGGACTCTGTCTCATAAATGGAGACTACACTGTCAAACTCCACTTTGCTGAGATTGTTTTTACTAATGATAGAACATTTAACAGCCTTGGGAAGCGTATATTTGATGTCTACATCCAGGATAAGCTGGTGCTGAAAGATTTCAATATAGAAAGTGAAGCTGGTGGTGCAGGCAAGCCCATTGTAAAGAATTTCACTGCAGTTGTTTCGAGTAATACATTAAAGATCCATTTTTACTGGGCTGGAAAAGGGACAACAGGCATCCCAGACAGAGGATTTTATGGCCCTCTCATATCTGCTATATCAGTAGATCCCAACTTCGAACCTCCCTCATTTGAGGGCAACAAGAATCACGTCGTTATAGCAGTTGGGACAGTGGCTGCAGCACTACTTCTTCTGCTTCTGGTCTTAGGCATCTTGAGGAGAAAGGGTTGTTTGGGAGGAAAGATCTCTGCAGATAAAGAGCTCAGAGATTTAGATCTTCAAACAGGATTATATACTTTAAGACAGATAAAGGCTGCAACGAAAAACTTTGATGCAGCAAACAAACTCGGGGAGGGTGGCTTTGGTTCAGTCTACAAGGGTCTGTTATCAGATGGCACAGTAATTGCAGTGAAGCAGCTCTCTTCGAAATCAAAGCAAGGAAATCGCGAATTCGTGAATGAAATAGGCATGATTTCTGCCCTGCAACATCCTAACCTTGTGAAGCTGTATGGATGTTGTGTTGAAGGGAACCAGATGCTTTTAATTTATGAGTACATGGAAAATAACTGCGTATCACGTGCTCTTTTTGGAAGCGACCCCGCTTGCAGATTGAAACTGGACTGGCCTACCAGGAAGAAGATTTGCATAGGTATTGCCAGAGGTTTGGCCTATCTCCATGAAGAGTCGATACTAAAGATAGTGCATCGCGATATCAAGACAAGCAATGTGCTGCTTGACAAGGACTTTAATGCTAAAATTTCTGATTTTGGCTTGGCAAAGCTTAATGAAGATGACAACACCCACATCAGCACGCGGATTGCTGGAACTGTTGGTTATATGGCTCCTGAGTATGCAATGCGTGGTTACTTAACCGACAAAGCAGATGTTTATAGCTTTGGAGTCGTCGCATTGGAAATCGTTAGCGGAAAGAGCAACACAAACTACAGGCCAAAGGAGGAGTTTGTCTACCTTCTTGACTGGGCTTATGTGTTGCAAGAGAGAGGGAGTCTATTGGAGTTGGTTGATCCAGCCTTGGGTTCAGAATATTCATCAGAGGAGACAATGCTGATGCTAAATGTTGCTCTCATGTGCACCAATGCATCTCCCACTCTCAGGCCTACAATGCCCCAAGTAGTGAGCATGCTTGAAGGCAGAACAGAAGTTCAAGACCTGCTTTCTGATCCCGGCTTTTCTGCCATCAATTCCAAAGTCAGGGCCATTAGAAATCACTTCTGGCAAAATCCAAGTTGTACACAAAGCATGTCAACCAACGGTCCGAGAACTGATACCTCTGGTAATTCATACATTGAAACAGAAGAGAATGGCCGTCTTTTAGGAGTTAGTTCTGTAACTTCAGTTAAATCTGAAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

1033

Amino Acids

113.75

Weight (kDa)

8.07

Isoelectric Point (pI)

33.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07650 AT1G07650 AT1G07650 AT1G07650
fragaria_vesca	FvH4_6g37550 FvH4_6g37550 FvH4_6g37550 FvH4_6g37550 FvH4_6g37550 FvH4_6g37550 FvH4_6g37550 FvH4_6g37550 FvH4_6g37550 FvH4_6g37550 FvH4_6g37550 FvH4_6g37550 FvH4_6g37550
malus_domestica	MD09G1156900.v1.1
prunus_persica	Prupe.3G168800_v2.0.a1 Prupe.3G168800_v2.0.a1 Prupe.3G168800_v2.0.a1 Prupe.3G168800_v2.0.a1 Prupe.3G168800_v2.0.a1 Prupe.3G168800_v2.0.a1 Prupe.3G168800_v2.0.a1 Prupe.3G168800_v2.0.a1
pyrus_communis	pycom09g07560 pycom11g23700
rosa_chinensis	RchiOBHm_Chr2g0149971 RchiOBHm_Chr2g0150431
rosa_laevigata	RLG00000000535 RLG00000001460 RLG00000011700 RLG00000016818 RLG00000020498 RLG00000030032 RLG00000034736
rosa_multiflora	Rmu_co8438829.1_g000001 Rmu_sc0020041.1_g000001 Rmu_ssc0000480.1_g000017
rosa_roxburghii	Rroxscaffold_2G00097110
rosa_rugosa	Rorug02G0421300
rosa_samantha	Rh2DG501600 Rh4AG126900
rosa_wichuraiana	Rw2G039240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	655, 1553
Acc36I	ACCTGC	2 cut(s)	997, 2904
AccI	GTMKAC	3 cut(s)	1632, 2097, 2691
AccII	CGCG	3 cut(s)	2172, 2433, 2539
AciI	CCGC	4 cut(s)	1491, 2325, 2539, 2649
AclWI	GGATC	7 cut(s)	182, 907, 1507, 1741, 1826, 2744, 2900
AcoI	YGGCCR	1 cut(s)	3049
AcsI	RAATTY	6 cut(s)	350, 859, 1225, 1711, 2174, 2481
AcuI	CTGAAG	2 cut(s)	347, 3063
AcvI	CACGTG	2 cut(s)	1496, 2303
AfaI	GTAC	9 cut(s)	196, 337, 430, 832, 1059, 1103, 1484, 2279, 2977
AfiI	CCNNNNNNNGG	7 cut(s)	197, 544, 566, 1793, 2759, 2838, 2937
AflII	CTTAAG	1 cut(s)	790
AgeI	ACCGGT	1 cut(s)	977
AjiI	CACGTC	2 cut(s)	298, 1876
AjnI	CCWGG	6 cut(s)	744, 1060, 1072, 1215, 1638, 2354
AjuI	GAANNNNNNNTTGG	2 cut(s)	1284, 1316
Alw21I	GWGCWC	5 cut(s)	254, 1470, 1989, 2308, 2819
Alw26I	GTCTC	5 cut(s)	843, 1465, 1538, 1539, 2777
Alw44I	GTGCAC	1 cut(s)	2815
AlwI	GGATC	7 cut(s)	182, 907, 1507, 1741, 1826, 2744, 2900
AlwNI	CAGNNNCTG	3 cut(s)	338, 370, 1901
Ama87I	CYCGRG	1 cut(s)	2072
AoxI	GGCC	9 cut(s)	318, 764, 1804, 2348, 2391, 2672, 2840, 2940, 3049
ApaLI	GTGCAC	1 cut(s)	2815
ApeKI	GCWGC	7 cut(s)	1380, 1901, 1904, 2039, 2060, 2140, 2455
ApoI	RAATTY	6 cut(s)	350, 859, 1225, 1711, 2174, 2481
AsiGI	ACCGGT	1 cut(s)	977
Asp700I	GAANNNNTTC	1 cut(s)	1661
AspLEI	GCGC	1 cut(s)	438
AspS9I	GGNCC	8 cut(s)	319, 476, 548, 764, 1069, 1805, 2940, 2999
AsuC2I	CCSGG	1 cut(s)	2910
AsuHPI	GGTGA	3 cut(s)	487, 496, 992
AsuII	TTCGAA	2 cut(s)	1842, 2150
AvaI	CYCGRG	1 cut(s)	2072
AvaII	GGWCC	4 cut(s)	476, 548, 1069, 2999
BaeGI	GKGCMC	1 cut(s)	2819
BanII	GRGCYC	3 cut(s)	254, 1375, 1989
BarI	GAAGNNNNNNTAC	4 cut(s)	1094, 1126, 2397, 2429
BbrPI	CACGTG	2 cut(s)	1496, 2303
Bbv12I	GWGCWC	5 cut(s)	254, 1470, 1989, 2308, 2819
BbvCI	CCTCAGC	1 cut(s)	959
BbvI	GCAGC	7 cut(s)	1392, 1888, 1916, 2026, 2072, 2152, 2442
BccI	CCATC	5 cut(s)	856, 1059, 1514, 2111, 2930
BceAI	ACGGC	1 cut(s)	3036
BcgI	CGANNNNNNTGC	4 cut(s)	1710, 1744, 2150, 2184
BciT130I	CCWGG	6 cut(s)	746, 1062, 1074, 1217, 1640, 2356
BclI	TGATCA	1 cut(s)	576
BcnI	CCSGG	1 cut(s)	2910
BcoDI	GTCTC	5 cut(s)	843, 1465, 1538, 1539, 2777
BfaI	CTAG	5 cut(s)	638, 777, 953, 1007, 1146
BfmI	CTRYAG	4 cut(s)	1719, 1902, 1974, 2668
BfrI	CTTAAG	1 cut(s)	790
BfuAI	ACCTGC	2 cut(s)	997, 2904
BglII	AGATCT	2 cut(s)	1968, 1999
BisI	GCNGC	7 cut(s)	1381, 1902, 1905, 2040, 2061, 2141, 2456
BlsI	GCNGC	7 cut(s)	1382, 1903, 1906, 2041, 2062, 2142, 2457
Bme1390I	CCNGG	7 cut(s)	746, 1062, 1074, 1217, 1640, 2356, 2910
Bme18I	GGWCC	4 cut(s)	476, 548, 1069, 2999
BmeT110I	CYCGRG	1 cut(s)	2072
BmgBI	CACGTC	2 cut(s)	298, 1876
BmgT120I	GGNCC	8 cut(s)	319, 476, 548, 764, 1069, 1805, 2940, 2999
BmiI	GGNNCC	7 cut(s)	549, 550, 765, 1070, 1071, 2255, 2568
BmrFI	CCNGG	7 cut(s)	746, 1062, 1074, 1217, 1640, 2356, 2910
BmrI	ACTGGG	4 cut(s)	181, 1378, 1768, 2713
BmsI	GCATC	8 cut(s)	1001, 1791, 1944, 2047, 2250, 2437, 2784, 2834
BmuI	ACTGGG	4 cut(s)	181, 1378, 1768, 2713
BoxI	GACNNNNGTC	1 cut(s)	387
BplI	GAGNNNNNCTC	2 cut(s)	1160, 1192
BpmI	CTGGAG	1 cut(s)	639
Bpu10I	CCTNAGC	1 cut(s)	959
Bpu14I	TTCGAA	2 cut(s)	1842, 2150
BpuEI	CTTGAG	5 cut(s)	541, 779, 844, 1111, 1960
BpuMI	CCSGG	1 cut(s)	2910
BsaAI	YACGTR	3 cut(s)	1026, 1496, 2303
BsaBI	GATNNNNATC	1 cut(s)	1998
BsaJI	CCNNGG	4 cut(s)	745, 1072, 1609, 2757
BsaWI	WCCGGW	3 cut(s)	473, 559, 977
BsaXI	ACNNNNNCTCC	4 cut(s)	823, 853, 1936, 1966
Bsc4I	CCNNNNNNNGG	7 cut(s)	197, 544, 566, 1793, 2759, 2838, 2937
Bse118I	RCCGGY	1 cut(s)	977
Bse1I	ACTGG	8 cut(s)	176, 622, 1054, 1373, 1763, 2346, 2351, 2708
Bse3DI	GCAATG	2 cut(s)	2455, 2586
Bse8I	GATNNNNATC	1 cut(s)	1998
BseBI	CCWGG	6 cut(s)	746, 1062, 1074, 1217, 1640, 2356
BseDI	CCNNGG	4 cut(s)	745, 1072, 1609, 2757
BseGI	GGATG	5 cut(s)	1070, 1635, 1782, 2212, 2243
BseJI	GATNNNNATC	1 cut(s)	1998
BseLI	CCNNNNNNNGG	7 cut(s)	197, 544, 566, 1793, 2759, 2838, 2937
BseMI	GCAATG	2 cut(s)	2455, 2586
BseNI	ACTGG	8 cut(s)	176, 622, 1054, 1373, 1763, 2346, 2351, 2708
BseRI	GAGGAG	5 cut(s)	247, 1168, 1957, 2696, 2795
BseSI	GKGCMC	1 cut(s)	2819
BseXI	GCAGC	7 cut(s)	1392, 1888, 1916, 2026, 2072, 2152, 2442
BseYI	CCCAGC	2 cut(s)	157, 916
BsgI	GTGCAG	3 cut(s)	253, 1428, 1710
Bsh1236I	CGCG	3 cut(s)	2172, 2433, 2539
Bsh1285I	CGRYCG	1 cut(s)	1491
BshFI	GGCC	9 cut(s)	320, 766, 1806, 2350, 2393, 2674, 2842, 2942, 3051
BshTI	ACCGGT	1 cut(s)	977
BsiEI	CGRYCG	1 cut(s)	1491
BsiHKAI	GWGCWC	5 cut(s)	254, 1470, 1989, 2308, 2819
BsiHKCI	CYCGRG	1 cut(s)	2072
BsiSI	CCGG	4 cut(s)	474, 560, 978, 2910
BslFI	GGGAC	4 cut(s)	561, 1055, 1786, 1906
BslI	CCNNNNNNNGG	7 cut(s)	197, 544, 566, 1793, 2759, 2838, 2937
BsmAI	GTCTC	5 cut(s)	843, 1465, 1538, 1539, 2777
BsmFI	GGGAC	4 cut(s)	561, 1055, 1786, 1906
BsmI	GAATGC	1 cut(s)	136
BsnI	GGCC	9 cut(s)	320, 766, 1806, 2350, 2393, 2674, 2842, 2942, 3051
BsoBI	CYCGRG	1 cut(s)	2072
Bsp119I	TTCGAA	2 cut(s)	1842, 2150
Bsp1286I	GDGCHC	6 cut(s)	254, 1375, 1470, 1989, 2308, 2819
Bsp1407I	TGTACA	3 cut(s)	194, 1482, 2975
Bsp68I	TCGCGA	2 cut(s)	2172, 2433
BspACI	CCGC	4 cut(s)	1491, 2325, 2539, 2649
BspANI	GGCC	9 cut(s)	320, 766, 1806, 2350, 2393, 2674, 2842, 2942, 3051
BspFNI	CGCG	3 cut(s)	2172, 2433, 2539
BspLI	GGNNCC	7 cut(s)	549, 550, 765, 1070, 1071, 2255, 2568
BspMAI	CTGCAG	3 cut(s)	1723, 1906, 1978
BspMI	ACCTGC	2 cut(s)	997, 2904
BspPI	GGATC	7 cut(s)	182, 907, 1507, 1741, 1826, 2744, 2900
BspT104I	TTCGAA	2 cut(s)	1842, 2150
BspTI	CTTAAG	1 cut(s)	790
BsrDI	GCAATG	2 cut(s)	2455, 2586
BsrFI	RCCGGY	1 cut(s)	977
BsrGI	TGTACA	3 cut(s)	194, 1482, 2975
BsrI	ACTGG	8 cut(s)	176, 622, 1054, 1373, 1763, 2346, 2351, 2708
BssAI	RCCGGY	1 cut(s)	977
BssECI	CCNNGG	4 cut(s)	745, 1072, 1609, 2757
BssT1I	CCWWGG	2 cut(s)	1609, 2757
Bst2UI	CCWGG	6 cut(s)	746, 1062, 1074, 1217, 1640, 2356
Bst6I	CTCTTC	4 cut(s)	2152, 2400, 3036, 3087
BstAFI	CTTAAG	1 cut(s)	790
BstAUI	TGTACA	3 cut(s)	194, 1482, 2975
BstBAI	YACGTR	3 cut(s)	1026, 1496, 2303
BstBI	TTCGAA	2 cut(s)	1842, 2150
BstC8I	GCNNGC	5 cut(s)	1693, 1697, 2329, 2537, 2867
BstF5I	GGATG	5 cut(s)	1070, 1635, 1782, 2212, 2243
BstFNI	CGCG	3 cut(s)	2172, 2433, 2539
BstHHI	GCGC	1 cut(s)	438
BstMAI	GTCTC	5 cut(s)	843, 1465, 1538, 1539, 2777
BstMCI	CGRYCG	1 cut(s)	1491
BstMWI	GCNNNNNNNGC	7 cut(s)	249, 317, 786, 926, 1688, 2655, 2848
BstNI	CCWGG	6 cut(s)	746, 1062, 1074, 1217, 1640, 2356
BstNSI	RCATGY	3 cut(s)	264, 2869, 2989
BstPAI	GACNNNNGTC	1 cut(s)	387
BstSCI	CCNGG	7 cut(s)	744, 1060, 1072, 1215, 1638, 2354, 2908
BstSFI	CTRYAG	4 cut(s)	1719, 1902, 1974, 2668
BstSLI	GKGCMC	1 cut(s)	2819
BstUI	CGCG	3 cut(s)	2172, 2433, 2539
BstV1I	GCAGC	7 cut(s)	1392, 1888, 1916, 2026, 2072, 2152, 2442
BstX2I	RGATCY	6 cut(s)	187, 1499, 1746, 1831, 1968, 1999
BstXI	CCANNNNNNTGG	2 cut(s)	1049, 2389
BstYI	RGATCY	6 cut(s)	187, 1499, 1746, 1831, 1968, 1999
BsuRI	GGCC	9 cut(s)	320, 766, 1806, 2350, 2393, 2674, 2842, 2942, 3051
BtgZI	GCGATG	1 cut(s)	2414
BtrI	CACGTC	2 cut(s)	298, 1876
BtsCI	GGATG	5 cut(s)	1070, 1635, 1782, 2212, 2243
BtsI	GCAGTG	3 cut(s)	57, 1716, 2139
BtsIMutI	CAGTG	7 cut(s)	57, 615, 878, 1551, 1716, 1902, 2139
BtuMI	TCGCGA	2 cut(s)	2172, 2433
BveI	ACCTGC	2 cut(s)	997, 2904
Cac8I	GCNNGC	5 cut(s)	1693, 1697, 2329, 2537, 2867
CaiI	CAGNNNCTG	3 cut(s)	338, 370, 1901
CfoI	GCGC	1 cut(s)	438
Cfr10I	RCCGGY	1 cut(s)	977
Cfr13I	GGNCC	8 cut(s)	319, 476, 548, 764, 1069, 1805, 2940, 2999
CpoI	CGGWCCG	1 cut(s)	2999
Csp6I	GTAC	9 cut(s)	195, 336, 429, 831, 1058, 1102, 1483, 2278, 2976
CspAI	ACCGGT	1 cut(s)	977
CspCI	CAANNNNNGTGG	2 cut(s)	1264, 1299
CspI	CGGWCCG	1 cut(s)	2999
CviQI	GTAC	9 cut(s)	195, 336, 429, 831, 1058, 1102, 1483, 2278, 2976
DrdI	GACNNNNNNGTC	2 cut(s)	655, 1553
DseDI	GACNNNNNNGTC	2 cut(s)	655, 1553
EaeI	YGGCCR	1 cut(s)	3049
Eam1104I	CTCTTC	4 cut(s)	2152, 2400, 3036, 3087
EarI	CTCTTC	4 cut(s)	2152, 2400, 3036, 3087
Ecl136II	GAGCTC	2 cut(s)	252, 1987
Eco130I	CCWWGG	2 cut(s)	1609, 2757
Eco147I	AGGCCT	1 cut(s)	2842
Eco24I	GRGCYC	3 cut(s)	254, 1375, 1989
Eco32I	GATATC	2 cut(s)	1420, 2437
Eco47I	GGWCC	4 cut(s)	476, 548, 1069, 2999
Eco53kI	GAGCTC	2 cut(s)	252, 1987
Eco57I	CTGAAG	2 cut(s)	347, 3063
Eco72I	CACGTG	2 cut(s)	1496, 2303
Eco88I	CYCGRG	1 cut(s)	2072
EcoICRI	GAGCTC	2 cut(s)	252, 1987
EcoO109I	RGGNCCY	3 cut(s)	548, 764, 1069
EcoRI	GAATTC	1 cut(s)	2174
EcoRII	CCWGG	6 cut(s)	744, 1060, 1072, 1215, 1638, 2354
EcoRV	GATATC	2 cut(s)	1420, 2437
EcoT14I	CCWWGG	2 cut(s)	1609, 2757
EcoT22I	ATGCAT	2 cut(s)	136, 2827
EcoT38I	GRGCYC	3 cut(s)	254, 1375, 1989
ErhI	CCWWGG	2 cut(s)	1609, 2757
FalI	AAGNNNNNCTT	4 cut(s)	1327, 1359, 2883, 2915
FaqI	GGGAC	4 cut(s)	561, 1055, 1786, 1906
FauI	CCCGC	1 cut(s)	2332
FauNDI	CATATG	1 cut(s)	50
FbaI	TGATCA	1 cut(s)	576
FblI	GTMKAC	3 cut(s)	1632, 2097, 2691
Fnu4HI	GCNGC	7 cut(s)	1381, 1902, 1905, 2040, 2061, 2141, 2456
FokI	GGATG	5 cut(s)	1077, 1622, 1769, 2199, 2250
FriOI	GRGCYC	3 cut(s)	254, 1375, 1989
Fsp4HI	GCNGC	7 cut(s)	1381, 1902, 1905, 2040, 2061, 2141, 2456
FspBI	CTAG	5 cut(s)	638, 777, 953, 1007, 1146
GlaI	GCGC	1 cut(s)	437
GluI	GCNGC	7 cut(s)	1381, 1902, 1905, 2040, 2061, 2141, 2456
GsaI	CCCAGC	2 cut(s)	161, 920
GsuI	CTGGAG	1 cut(s)	639
HaeIII	GGCC	9 cut(s)	320, 766, 1806, 2350, 2393, 2674, 2842, 2942, 3051
HapII	CCGG	4 cut(s)	474, 560, 978, 2910
HhaI	GCGC	1 cut(s)	438
Hin6I	GCGC	1 cut(s)	436
HinP1I	GCGC	1 cut(s)	436
HincII	GTYRAC	3 cut(s)	648, 1018, 2991
HindII	GTYRAC	3 cut(s)	648, 1018, 2991
HindIII	AAGCTT	3 cut(s)	110, 359, 2504
HpaII	CCGG	4 cut(s)	474, 560, 978, 2910
HphI	GGTGA	3 cut(s)	487, 496, 992
Hpy99I	CGWCG	2 cut(s)	1880, 2633
HpyCH4IV	ACGT	6 cut(s)	297, 1025, 1255, 1495, 1875, 2302
HpyF10VI	GCNNNNNNNGC	7 cut(s)	249, 317, 786, 926, 1688, 2655, 2848
HpySE526I	ACGT	6 cut(s)	297, 1025, 1255, 1495, 1875, 2302
HspAI	GCGC	1 cut(s)	436
KflI	GGGWCCC	2 cut(s)	548, 1069
Ksp22I	TGATCA	1 cut(s)	576
LmnI	GCTCC	2 cut(s)	59, 2572
Lsp1109I	GCAGC	7 cut(s)	1392, 1888, 1916, 2026, 2072, 2152, 2442
LweI	GCATC	8 cut(s)	1001, 1791, 1944, 2047, 2250, 2437, 2784, 2834
MaeI	CTAG	5 cut(s)	638, 777, 953, 1007, 1146
MaeII	ACGT	6 cut(s)	297, 1025, 1255, 1495, 1875, 2302
MaeIII	GTNAC	6 cut(s)	263, 442, 674, 1172, 2588, 3073
MflI	RGATCY	6 cut(s)	187, 1499, 1746, 1831, 1968, 1999
MhlI	GDGCHC	6 cut(s)	254, 1375, 1470, 1989, 2308, 2819
MlyI	GAGTC	6 cut(s)	397, 845, 1521, 2417, 2634, 2740
MmeI	TCCRAC	2 cut(s)	1027, 1231
Mph1103I	ATGCAT	2 cut(s)	136, 2827
MroXI	GAANNNNTTC	1 cut(s)	1661
MspA1I	CMGCKG	1 cut(s)	1187
MspCI	CTTAAG	1 cut(s)	790
MspI	CCGG	4 cut(s)	474, 560, 978, 2910
MspR9I	CCNGG	7 cut(s)	746, 1062, 1074, 1217, 1640, 2356, 2910
Mva1269I	GAATGC	1 cut(s)	136
MvaI	CCWGG	6 cut(s)	746, 1062, 1074, 1217, 1640, 2356
MvnI	CGCG	3 cut(s)	2172, 2433, 2539
MwoI	GCNNNNNNNGC	7 cut(s)	249, 317, 786, 926, 1688, 2655, 2848
NciI	CCSGG	1 cut(s)	2910
NdeI	CATATG	1 cut(s)	50
NlaIV	GGNNCC	7 cut(s)	549, 550, 765, 1070, 1071, 2255, 2568
NmuCI	GTSAC	1 cut(s)	674
NruI	TCGCGA	2 cut(s)	2172, 2433
NsiI	ATGCAT	2 cut(s)	136, 2827
NspI	RCATGY	3 cut(s)	264, 2869, 2989
NspV	TTCGAA	2 cut(s)	1842, 2150
PaeI	GCATGC	1 cut(s)	2869
PceI	AGGCCT	1 cut(s)	2842
PctI	GAATGC	1 cut(s)	136
PdmI	GAANNNNTTC	1 cut(s)	1661
PfeI	GAWTC	6 cut(s)	325, 866, 1203, 1412, 1472, 1870
PflFI	GACNNNGTC	1 cut(s)	1530
PfoI	TCCNGGA	1 cut(s)	1638
PinAI	ACCGGT	1 cut(s)	977
PkrI	GCNGC	7 cut(s)	1382, 1903, 1906, 2041, 2062, 2142, 2457
PleI	GAGTC	6 cut(s)	396, 844, 1521, 2416, 2633, 2739
PmaCI	CACGTG	2 cut(s)	1496, 2303
PmlI	CACGTG	2 cut(s)	1496, 2303
PpsI	GAGTC	6 cut(s)	396, 844, 1521, 2416, 2633, 2739
Ppu21I	YACGTR	3 cut(s)	1026, 1496, 2303
PpuMI	RGGWCCY	2 cut(s)	548, 1069
PshAI	GACNNNNGTC	1 cut(s)	387
Psp124BI	GAGCTC	2 cut(s)	254, 1989
Psp5II	RGGWCCY	2 cut(s)	548, 1069
Psp6I	CCWGG	6 cut(s)	744, 1060, 1072, 1215, 1638, 2354
PspCI	CACGTG	2 cut(s)	1496, 2303
PspFI	CCCAGC	2 cut(s)	157, 916
PspGI	CCWGG	6 cut(s)	744, 1060, 1072, 1215, 1638, 2354
PspN4I	GGNNCC	7 cut(s)	549, 550, 765, 1070, 1071, 2255, 2568
PspPI	GGNCC	8 cut(s)	319, 476, 548, 764, 1069, 1805, 2940, 2999
PspPPI	RGGWCCY	2 cut(s)	548, 1069
PstI	CTGCAG	3 cut(s)	1723, 1906, 1978
PstNI	CAGNNNCTG	3 cut(s)	338, 370, 1901
PsuI	RGATCY	6 cut(s)	187, 1499, 1746, 1831, 1968, 1999
PsyI	GACNNNGTC	1 cut(s)	1530
PvuII	CAGCTG	1 cut(s)	1187
RruI	TCGCGA	2 cut(s)	2172, 2433
RsaI	GTAC	9 cut(s)	196, 337, 430, 832, 1059, 1103, 1484, 2279, 2977
RsaNI	GTAC	9 cut(s)	195, 336, 429, 831, 1058, 1102, 1483, 2278, 2976
Rsr2I	CGGWCCG	1 cut(s)	2999
RsrII	CGGWCCG	1 cut(s)	2999
SacI	GAGCTC	2 cut(s)	254, 1989
SatI	GCNGC	7 cut(s)	1381, 1902, 1905, 2040, 2061, 2141, 2456
Sau96I	GGNCC	8 cut(s)	319, 476, 548, 764, 1069, 1805, 2940, 2999
SchI	GAGTC	6 cut(s)	397, 845, 1521, 2417, 2634, 2740
ScrFI	CCNGG	7 cut(s)	746, 1062, 1074, 1217, 1640, 2356, 2910
SduI	GDGCHC	6 cut(s)	254, 1375, 1470, 1989, 2308, 2819
SfaNI	GCATC	8 cut(s)	1001, 1791, 1944, 2047, 2250, 2437, 2784, 2834
SfcI	CTRYAG	4 cut(s)	1719, 1902, 1974, 2668
SfuI	TTCGAA	2 cut(s)	1842, 2150
SinI	GGWCC	4 cut(s)	476, 548, 1069, 2999
SmlI	CTYRAG	6 cut(s)	520, 758, 790, 823, 1126, 1939
SmoI	CTYRAG	6 cut(s)	520, 758, 790, 823, 1126, 1939
SphI	GCATGC	1 cut(s)	2869
SseBI	AGGCCT	1 cut(s)	2842
SsiI	CCGC	4 cut(s)	1491, 2325, 2539, 2649
SspI	AATATT	4 cut(s)	1087, 1262, 1300, 2771
SspMI	CTAG	5 cut(s)	638, 777, 953, 1007, 1146
SstI	GAGCTC	2 cut(s)	254, 1989
StuI	AGGCCT	1 cut(s)	2842
StyD4I	CCNGG	7 cut(s)	744, 1060, 1072, 1215, 1638, 2354, 2908
StyI	CCWWGG	2 cut(s)	1609, 2757
TaiI	ACGT	6 cut(s)	300, 1028, 1258, 1498, 1878, 2305
TaqI	TCGA	7 cut(s)	221, 391, 1470, 1730, 1842, 2150, 2411
TatI	WGTACW	4 cut(s)	194, 1482, 2277, 2975
TfiI	GAWTC	6 cut(s)	325, 866, 1203, 1412, 1472, 1870
TscAI	CASTG	7 cut(s)	64, 622, 885, 1558, 1723, 1902, 2139
TseFI	GTSAC	1 cut(s)	674
TseI	GCWGC	7 cut(s)	1380, 1901, 1904, 2039, 2060, 2140, 2455
Tsp45I	GTSAC	1 cut(s)	674
TspGWI	ACGGA	2 cut(s)	739, 921
TspRI	CASTG	7 cut(s)	64, 622, 885, 1558, 1723, 1902, 2139
Tth111I	GACNNNGTC	1 cut(s)	1530
Vha464I	CTTAAG	1 cut(s)	790
VneI	GTGCAC	1 cut(s)	2815
VpaK11BI	GGWCC	4 cut(s)	476, 548, 1069, 2999
XapI	RAATTY	6 cut(s)	350, 859, 1225, 1711, 2174, 2481
XceI	RCATGY	3 cut(s)	264, 2869, 2989
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1354
XmiI	GTMKAC	3 cut(s)	1632, 2097, 2691
XmnI	GAANNNNTTC	1 cut(s)	1661
XspI	CTAG	5 cut(s)	638, 777, 953, 1007, 1146
Zsp2I	ATGCAT	2 cut(s)	136, 2827

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.