Prupe.3G246700_v2.0.a1

WPP domain-interacting tail-anchored protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
23784299 .. 23789100
4802 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G246700.1

Sequence Viewer

Length: 2094 bp
ATGGATTACGATGGTGGTCCCGAAGCAAGTGTATCTGTCAATGATGTTAATATTGATGACCCAGAAGTGGATTCGAGTAAAGTTGGCAATCTCGAAAGTGTCTCATCTGATGGTGTGATTGTTGGAGAATTAAGAAGTGTTGGCGAGGTTTTTACCAGAGTGGAATTGGATCTAGCATGTGCTTCTGAGAAGTTAGTTAACTTAAATGTTCTTATGATGCATGTGGCAACCAAGGAGAGTGACTTGGAAGCCCTTGCTTCCAAGGAAGAGCAGACATCAGTTGATTTTGTTGAGAAGGCTATGGAATTCGTTCTCTTGTCTGGAATTTTGGACTCTGAGGTGAGTGAATTGGATAAACTCATGGCTATACTTCAAGCAGAGATCACCAATGCCCAGGGGCTACTATCTTCATACACATGTTTGGGAGAAACTTTCGTGGTAGTAGAAGACAAGCTGTGTGACTCTGAACAATCTTTGAAGCAGTTGCAAGATCAGATCTCTGAAATAAGGATGCAATCCTTGAAGTTCCAGAGGACGTTTTCATGTTATGATGGAGAAGAAAATTGGAATGCTAACAAAGGAGTGGTCTATTTAGAGGATGACAAGTTCTCAAGCATGAATCTAAAGATAAATATGCAAACTGTTGAACAGCAAAGACATATACTGAGGATGCTAGAGAAATCTTTAGCAAGAGAGATGGATCTTGAAAAGAAACTGACTGAATCAAAACAAATCGAAGAAGATATGAAACTGAGGCTGCTCTCTTCAGAGCAAGAAGCATATTGCATGGAGGAGGAGGCAGCAGATGCTTGGGAGAGGTGGTTACAGGCAGATAATGCATCTGAGGTCCTTATGGGTATTTCAAAAGAATTACTGGGTAAACTCCATATTCTCCAGTTTAACTTAAACGGTTCAGTTCAGCGGGAAGCTGAACTAAGATTGAAGCTTGATGGTCAGGTTGAATCCCGAGAAAGCTCTTTGCGGAAACTTGAAAGCAGCAACGCAAAACTAAATAGCTTCCTTTTAGATCAGACAGCCGGCTTAAAAGACAGCTTGAAGGAAGCTGAAGATAAGTTAATTCTTGCTGATTCTGAGGCCTTTACTTTGAGAGAAAAGGTGAGTTCACTTGAGGAACAGCATACTGTTCTATGCTCAGACATTAGTGAATTGGAAAATGTCATCACAGATCTGAAAGAGAAAGTATCAAAGGCTGAAACTAGGGCTGAGAATGCAGAAGCCAAAAGCAAATTATTAACAGAGACTAATATGGAACTTAATGAAGAGATCGGACTTCTTAAAAGCACTGGCAGTGCCTCGGAGACGGTGGATTCACTTGAGAGGAAGTTAAGGGAATCTGATACCCAATTACAGCATGCAGTGGCATCTGCTGAAGCTAGCCTGGAGAAACAACAGATGTTGTATTCTACAATCAATGACATGGGAAGTGTGATTAAGGATCTAAAGCAGAAGGTTTTAAAAGCTGAAAGTCGGACTGACAGTGCAGAGGACAACTGTATAAGATTATCAGAATCTAATGCACTGCTAACTGAGGAACTAAGCTTTCTGAGGGGTAGATTGGCATGCATGGAGGCATCTTTGCATCAAGCCGAGGAAGTAAAAGTAGCTACTGCGACTGATATTGGTATTCGGTCCAAAGTTCTTACAAGTTTAGTGGTGCAACTTGCTTTTGAAAGAGAGCGCCTTCATAAGCAGATTTCTTCATTAGCGGTGGAGAATAAAACTTTGGTACTGAAGTTGCAAACAAACAATAGTCCATCTGTGGAAATGGGAAATGATGATAGAGGAAATCATAAAGACTTCATGCCCTCAAAGCATGGTTTGGCTACTGGCACAAGAGAAAGTGAGGAAGAAGCTGATGAGTTGTCTGATGGTAATTGTAAGCTGGATGAGACTCAGAATAATGTTTCTGTTGGTGAGACTAAAGTGGGACCTACTGATTCTACATCAGAGTTTGAGACCGCAAGGAGAATAGATGCAGGAGTTCTGAGCTTCAAGCATTTCCTCATGGCGATGCTTATTTTACTGATTTCAGTTGCAGCTTATTTTTTTCTCCAACAAGACTGCCCATTTTGA
Functional Annotation

Protein Analysis

698

Amino Acids

77.66

Weight (kDa)

4.61

Isoelectric Point (pI)

46.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 922, 982, 1727, 1980
AclWI GGATC 3 cut(s) 177, 708, 1464
AcsI RAATTY 2 cut(s) 305, 324
AcuI CTGAAG 4 cut(s) 750, 1086, 1410, 1772
AfaI GTAC 1 cut(s) 1749
AfiI CCNNNNNNNGG 1 cut(s) 67
AflIII ACRYGT 1 cut(s) 416
AjnI CCWGG 2 cut(s) 393, 1398
AjuI GAANNNNNNNTTGG 2 cut(s) 1727, 1759
AloI GAACNNNNNNTCC 2 cut(s) 590, 622
Alw26I GTCTC 6 cut(s) 106, 1253, 1313, 1904, 1931, 1970
AlwI GGATC 3 cut(s) 177, 708, 1464
Ama87I CYCGRG 1 cut(s) 966
AoxI GGCC 1 cut(s) 1095
ApeKI GCWGC 4 cut(s) 757, 800, 996, 2057
ApoI RAATTY 2 cut(s) 305, 324
ArsI GACNNNNNNTTYG 2 cut(s) 570, 602
Asp700I GAANNNNTTC 1 cut(s) 309
AspLEI GCGC 1 cut(s) 1701
AspS9I GGNCC 4 cut(s) 17, 847, 1650, 1949
AsuHPI GGTGA 4 cut(s) 352, 376, 1129, 1946
AsuNHI GCTAGC 1 cut(s) 1394
AvaI CYCGRG 1 cut(s) 966
AvaII GGWCC 4 cut(s) 17, 847, 1650, 1949
BaeI ACNNNNGTAYC 2 cut(s) 1739, 1772
BbsI GAAGAC 1 cut(s) 453
BbvI GCAGC 4 cut(s) 744, 812, 1008, 2069
BccI CCATC 7 cut(s) 5, 104, 545, 691, 944, 1783, 1883
BciT130I CCWGG 2 cut(s) 395, 1400
BcoDI GTCTC 6 cut(s) 106, 1253, 1313, 1904, 1931, 1970
BfaI CTAG 4 cut(s) 173, 674, 1218, 1395
BfoI RGCGCY 1 cut(s) 1702
BglII AGATCT 2 cut(s) 495, 1186
BisI GCNGC 4 cut(s) 758, 801, 997, 2058
BlsI GCNGC 4 cut(s) 759, 802, 998, 2059
Bme1390I CCNGG 2 cut(s) 395, 1400
Bme18I GGWCC 4 cut(s) 17, 847, 1650, 1949
BmeT110I CYCGRG 1 cut(s) 966
BmgT120I GGNCC 4 cut(s) 17, 847, 1650, 1949
BmiI GGNNCC 2 cut(s) 19, 1950
BmrFI CCNGG 2 cut(s) 395, 1400
BmrI ACTGGG 1 cut(s) 884
BmtI GCTAGC 1 cut(s) 1398
BmuI ACTGGG 1 cut(s) 884
BpiI GAAGAC 1 cut(s) 453
BpmI CTGGAG 2 cut(s) 878, 1421
BpuEI CTTGAG 3 cut(s) 595, 1148, 1355
BsaI GGTCTC 1 cut(s) 1970
BsaJI CCNNGG 6 cut(s) 231, 261, 393, 394, 1314, 1608
BsaXI ACNNNNNCTCC 2 cut(s) 806, 836
Bsc4I CCNNNNNNNGG 1 cut(s) 67
Bse118I RCCGGY 1 cut(s) 1037
Bse1I ACTGG 4 cut(s) 879, 895, 1309, 1852
BseBI CCWGG 2 cut(s) 395, 1400
BseDI CCNNGG 6 cut(s) 231, 261, 393, 394, 1314, 1608
BseGI GGATG 4 cut(s) 516, 604, 675, 1912
BseLI CCNNNNNNNGG 1 cut(s) 67
BseNI ACTGG 4 cut(s) 879, 895, 1309, 1852
BseRI GAGGAG 2 cut(s) 806, 809
BseXI GCAGC 4 cut(s) 744, 812, 1008, 2069
BsgI GTGCAG 1 cut(s) 1521
BshFI GGCC 1 cut(s) 1097
BsiHKCI CYCGRG 1 cut(s) 966
BsiSI CCGG 1 cut(s) 1038
BslFI GGGAC 2 cut(s) 3, 1962
BslI CCNNNNNNNGG 1 cut(s) 67
BsmAI GTCTC 6 cut(s) 106, 1253, 1313, 1904, 1931, 1970
BsmBI CGTCTC 1 cut(s) 1313
BsmFI GGGAC 2 cut(s) 3, 1962
BsmI GAATGC 2 cut(s) 574, 1234
BsnI GGCC 1 cut(s) 1097
Bso31I GGTCTC 1 cut(s) 1970
BsoBI CYCGRG 1 cut(s) 966
Bsp143I GATC 9 cut(s) 169, 381, 490, 495, 700, 1027, 1186, 1284, 1456
BspACI CCGC 4 cut(s) 922, 982, 1727, 1980
BspANI GGCC 1 cut(s) 1097
BspLI GGNNCC 2 cut(s) 19, 1950
BspOI GCTAGC 1 cut(s) 1398
BspPI GGATC 3 cut(s) 177, 708, 1464
BspQI GCTCTTC 1 cut(s) 261
BspTNI GGTCTC 1 cut(s) 1970
BsrFI RCCGGY 1 cut(s) 1037
BsrI ACTGG 4 cut(s) 879, 895, 1309, 1852
BssAI RCCGGY 1 cut(s) 1037
BssECI CCNNGG 6 cut(s) 231, 261, 393, 394, 1314, 1608
BssMI GATC 9 cut(s) 169, 381, 490, 495, 700, 1027, 1186, 1284, 1456
BssT1I CCWWGG 2 cut(s) 231, 261
Bst2UI CCWGG 2 cut(s) 395, 1400
Bst4CI ACNGT 6 cut(s) 643, 911, 1144, 1324, 1499, 1514
Bst6I CTCTTC 3 cut(s) 261, 769, 1275
BstAPI GCANNNNNTGC 2 cut(s) 806, 836
BstC8I GCNNGC 4 cut(s) 1039, 1374, 1396, 1582
BstF5I GGATG 4 cut(s) 516, 604, 675, 1912
BstH2I RGCGCY 1 cut(s) 1702
BstHHI GCGC 1 cut(s) 1701
BstKTI GATC 9 cut(s) 172, 384, 493, 498, 703, 1030, 1189, 1287, 1459
BstMAI GTCTC 6 cut(s) 106, 1253, 1313, 1904, 1931, 1970
BstMBI GATC 9 cut(s) 169, 381, 490, 495, 700, 1027, 1186, 1284, 1456
BstMWI GCNNNNNNNGC 4 cut(s) 806, 836, 1229, 1831
BstNI CCWGG 2 cut(s) 395, 1400
BstNSI RCATGY 5 cut(s) 180, 224, 420, 1376, 1584
BstSCI CCNGG 2 cut(s) 393, 1398
BstV1I GCAGC 4 cut(s) 744, 812, 1008, 2069
BstV2I GAAGAC 1 cut(s) 453
BstX2I RGATCY 5 cut(s) 169, 495, 700, 1186, 1456
BstYI RGATCY 5 cut(s) 169, 495, 700, 1186, 1456
BsuRI GGCC 1 cut(s) 1097
BtgZI GCGATG 1 cut(s) 2045
BtsCI GGATG 4 cut(s) 516, 604, 675, 1912
BtsI GCAGTG 3 cut(s) 1315, 1383, 1538
BtsIMutI CAGTG 5 cut(s) 1302, 1315, 1383, 1504, 1538
Cac8I GCNNGC 4 cut(s) 1039, 1374, 1396, 1582
CfoI GCGC 1 cut(s) 1701
Cfr10I RCCGGY 1 cut(s) 1037
Cfr13I GGNCC 4 cut(s) 17, 847, 1650, 1949
Csp6I GTAC 1 cut(s) 1748
CspCI CAANNNNNGTGG 2 cut(s) 1653, 1688
CviQI GTAC 1 cut(s) 1748
DpnI GATC 9 cut(s) 171, 383, 492, 497, 702, 1029, 1188, 1286, 1458
DpnII GATC 9 cut(s) 169, 381, 490, 495, 700, 1027, 1186, 1284, 1456
DraI TTTAAA 1 cut(s) 1476
Eam1104I CTCTTC 3 cut(s) 261, 769, 1275
EarI CTCTTC 3 cut(s) 261, 769, 1275
Eco130I CCWWGG 2 cut(s) 231, 261
Eco147I AGGCCT 1 cut(s) 1097
Eco31I GGTCTC 1 cut(s) 1970
Eco47I GGWCC 4 cut(s) 17, 847, 1650, 1949
Eco57I CTGAAG 4 cut(s) 750, 1086, 1410, 1772
Eco88I CYCGRG 1 cut(s) 966
EcoO109I RGGNCCY 2 cut(s) 847, 1949
EcoRI GAATTC 1 cut(s) 305
EcoRII CCWGG 2 cut(s) 393, 1398
EcoT14I CCWWGG 2 cut(s) 231, 261
EcoT22I ATGCAT 3 cut(s) 222, 841, 1586
ErhI CCWWGG 2 cut(s) 231, 261
Esp3I CGTCTC 1 cut(s) 1313
FaqI GGGAC 2 cut(s) 3, 1962
FauI CCCGC 1 cut(s) 915
Fnu4HI GCNGC 4 cut(s) 758, 801, 997, 2058
FokI GGATG 4 cut(s) 523, 611, 682, 1919
Fsp4HI GCNGC 4 cut(s) 758, 801, 997, 2058
FspBI CTAG 4 cut(s) 173, 674, 1218, 1395
GlaI GCGC 1 cut(s) 1700
GluI GCNGC 4 cut(s) 758, 801, 997, 2058
GsuI CTGGAG 2 cut(s) 878, 1421
HaeII RGCGCY 1 cut(s) 1702
HaeIII GGCC 1 cut(s) 1097
HapII CCGG 1 cut(s) 1038
HhaI GCGC 1 cut(s) 1701
Hin6I GCGC 1 cut(s) 1699
HinP1I GCGC 1 cut(s) 1699
HincII GTYRAC 1 cut(s) 199
HindII GTYRAC 1 cut(s) 199
HindIII AAGCTT 2 cut(s) 944, 1558
HpaI GTTAAC 1 cut(s) 199
HpaII CCGG 1 cut(s) 1038
HphI GGTGA 4 cut(s) 352, 376, 1129, 1946
Hpy166II GTNNAC 3 cut(s) 199, 881, 1124
Hpy188III TCNNGA 6 cut(s) 20, 92, 321, 529, 704, 966
Hpy8I GTNNAC 3 cut(s) 199, 881, 1124
HpyAV CCTTC 4 cut(s) 289, 1051, 1462, 1712
HpyCH4III ACNGT 6 cut(s) 643, 911, 1144, 1324, 1499, 1514
HpyCH4IV ACGT 1 cut(s) 536
HpyF10VI GCNNNNNNNGC 4 cut(s) 806, 836, 1229, 1831
HpySE526I ACGT 1 cut(s) 536
HspAI GCGC 1 cut(s) 1699
KroI GCCGGC 1 cut(s) 1037
KroNI GCCGGC 1 cut(s) 1039
KspAI GTTAAC 1 cut(s) 199
Kzo9I GATC 9 cut(s) 169, 381, 490, 495, 700, 1027, 1186, 1284, 1456
LguI GCTCTTC 1 cut(s) 261
Lsp1109I GCAGC 4 cut(s) 744, 812, 1008, 2069
MaeI CTAG 4 cut(s) 173, 674, 1218, 1395
MaeII ACGT 1 cut(s) 536
MaeIII GTNAC 3 cut(s) 239, 458, 822
MalI GATC 9 cut(s) 171, 383, 492, 497, 702, 1029, 1188, 1286, 1458
MboI GATC 9 cut(s) 169, 381, 490, 495, 700, 1027, 1186, 1284, 1456
MflI RGATCY 5 cut(s) 169, 495, 700, 1186, 1456
MlyI GAGTC 3 cut(s) 326, 455, 1906
MmeI TCCRAC 2 cut(s) 103, 1469
Mph1103I ATGCAT 3 cut(s) 222, 841, 1586
MroNI GCCGGC 1 cut(s) 1037
MroXI GAANNNNTTC 1 cut(s) 309
MslI CAYNNNNRTG 2 cut(s) 415, 2030
MspA1I CMGCKG 1 cut(s) 922
MspI CCGG 1 cut(s) 1038
MspR9I CCNGG 2 cut(s) 395, 1400
Mva1269I GAATGC 2 cut(s) 574, 1234
MvaI CCWGG 2 cut(s) 395, 1400
MwoI GCNNNNNNNGC 4 cut(s) 806, 836, 1229, 1831
NaeI GCCGGC 1 cut(s) 1039
NdeII GATC 9 cut(s) 169, 381, 490, 495, 700, 1027, 1186, 1284, 1456
NgoMIV GCCGGC 1 cut(s) 1037
NheI GCTAGC 1 cut(s) 1394
NlaIV GGNNCC 2 cut(s) 19, 1950
NmeAIII GCCGAG 1 cut(s) 1633
NmuCI GTSAC 2 cut(s) 239, 458
NsiI ATGCAT 3 cut(s) 222, 841, 1586
NspI RCATGY 5 cut(s) 180, 224, 420, 1376, 1584
PaeI GCATGC 2 cut(s) 1376, 1584
PasI CCCWGGG 1 cut(s) 394
PceI AGGCCT 1 cut(s) 1097
PciI ACATGT 1 cut(s) 416
PciSI GCTCTTC 1 cut(s) 261
PctI GAATGC 2 cut(s) 574, 1234
PdiI GCCGGC 1 cut(s) 1039
PdmI GAANNNNTTC 1 cut(s) 309
PfeI GAWTC 9 cut(s) 71, 619, 722, 962, 1088, 1328, 1352, 1529, 1958
PkrI GCNGC 4 cut(s) 759, 802, 998, 2059
PleI GAGTC 3 cut(s) 326, 455, 1906
PpsI GAGTC 3 cut(s) 326, 455, 1906
PpuMI RGGWCCY 2 cut(s) 847, 1949
PscI ACATGT 1 cut(s) 416
Psp5II RGGWCCY 2 cut(s) 847, 1949
Psp6I CCWGG 2 cut(s) 393, 1398
PspGI CCWGG 2 cut(s) 393, 1398
PspN4I GGNNCC 2 cut(s) 19, 1950
PspPI GGNCC 4 cut(s) 17, 847, 1650, 1949
PspPPI RGGWCCY 2 cut(s) 847, 1949
PsuI RGATCY 5 cut(s) 169, 495, 700, 1186, 1456
RsaI GTAC 1 cut(s) 1749
RsaNI GTAC 1 cut(s) 1748
RseI CAYNNNNRTG 2 cut(s) 415, 2030
SapI GCTCTTC 1 cut(s) 261
SatI GCNGC 4 cut(s) 758, 801, 997, 2058
Sau3AI GATC 9 cut(s) 169, 381, 490, 495, 700, 1027, 1186, 1284, 1456
Sau96I GGNCC 4 cut(s) 17, 847, 1650, 1949
SchI GAGTC 3 cut(s) 326, 455, 1906
ScrFI CCNGG 2 cut(s) 395, 1400
SinI GGWCC 4 cut(s) 17, 847, 1650, 1949
SmiMI CAYNNNNRTG 2 cut(s) 415, 2030
SmlI CTYRAG 3 cut(s) 610, 1127, 1334
SmoI CTYRAG 3 cut(s) 610, 1127, 1334
SphI GCATGC 2 cut(s) 1376, 1584
SseBI AGGCCT 1 cut(s) 1097
SsiI CCGC 4 cut(s) 922, 982, 1727, 1980
SspI AATATT 1 cut(s) 52
SspMI CTAG 4 cut(s) 173, 674, 1218, 1395
StuI AGGCCT 1 cut(s) 1097
StyD4I CCNGG 2 cut(s) 393, 1398
StyI CCWWGG 2 cut(s) 231, 261
TaaI ACNGT 6 cut(s) 643, 911, 1144, 1324, 1499, 1514
TaiI ACGT 1 cut(s) 539
TaqI TCGA 3 cut(s) 74, 93, 735
TaqII GACCGA 1 cut(s) 1638
TfiI GAWTC 9 cut(s) 71, 619, 722, 962, 1088, 1328, 1352, 1529, 1958
TscAI CASTG 5 cut(s) 1309, 1315, 1383, 1504, 1545
TseFI GTSAC 2 cut(s) 239, 458
TseI GCWGC 4 cut(s) 757, 800, 996, 2057
Tsp45I GTSAC 2 cut(s) 239, 458
TspDTI ATGAA 8 cut(s) 399, 531, 632, 761, 1293, 1694, 1710, 1810
TspRI CASTG 5 cut(s) 1309, 1315, 1383, 1504, 1545
VpaK11BI GGWCC 4 cut(s) 17, 847, 1650, 1949
XapI RAATTY 2 cut(s) 305, 324
XceI RCATGY 5 cut(s) 180, 224, 420, 1376, 1584
XcmI CCANNNNNNNNNTGG 1 cut(s) 163
XmnI GAANNNNTTC 1 cut(s) 309
XspI CTAG 4 cut(s) 173, 674, 1218, 1395
Zsp2I ATGCAT 3 cut(s) 222, 841, 1586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.