Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0002372

Physical Location & Seq

Genomic Coordinates Reverse (-)

353417 .. 357342

Gene Structure 3926 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g00440.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGTCCACACCCGCCGACCCAAATGCAGAAGCAGTTTTGCTTCCTTTCTCTCTTCGTTCCATCGTTTTCTGTCTGTGTTGTGTGCCTCTGCGAGCTCCAACAGAATCTCACACCCAGTTTTTCCAAAGGTTTCAGAATCACGTAAACAAGTGCGGTCTTAAAATGGATTATGGTGCTGGTCATGAAGCGAGTGTATCTGTCAATGATGTTAATATTGATGACCTGGAAGTGGAATCGAGTATAGCTTGCAATCTCGGAAGTGTCTCATCTGATGGTGCGGTTATTGGAGAATTAAGACATCTTGGCGAGGTTCTGACCCGAGTGGAACTAGATCGATCATGTGCATCTGAGAAGTTAGTTAATCTAAATGTTCTTATGATGCATGTGGCAACCAGGGAGAGCGAGTTTGAAGCCTTTGCTTCTGAGGAAGAGCAGACATCAGCTTATTATCTTGAGAAGGCTCTGGAACTCAGTCACTTATCTGGAATTTTAGACTCAGAGTTGAGTGAATTGGATAAACTCATGGCTATACTTCAAACAGAGATCACCAGTGCCCAGGGGATACTATCTTCATACACGTACTTGGGAGAAACTGTCGCGGTGATTGAAGAAAAGCTGTGCGACTCTGAACAATCATTGAAGCAGTTGCAAGATCAGGCCTATGAAATTAGGATGGAATCCTTGAATCTCCAGAGGGCATTTCCATGTTTTGACGGAGAACAAAATCGGAATGATAACGAAGAAGTGGTTGGTTTAGAGGATGACAAAGTTTCGAGCACGAATGTAAAGATAAAAATGCAATCTGTTGAACAGCAAAGACATATTCTGAGGATGCTAGAGAAGGCTTTGGCAAGAGAGATGGATCTTGAAAAGAAACTGACCAAATCAAAACAAATTGAAGAAGATCTGAAACTGAGGGTGCACTCTTCGGAGCAAGAAGCATATTGCATGGAGGAGGAAGCGGCAGATGCTTTGGGTAGGTGGTTGCAGGCAGATAATGCATCTGAGGTCCTGATGGGTATTTCAAAAGAGCTGTTGGGTAGACTTCAGGTTCTCCAGTTTAATTTAAATGGTTCAGCTCAGCGAGAAGCTGAGCTGAGATCAAAACTCAACGGTCAGGCTGAAGCCAAAGAAAACACATTGCGGAAGCTTGAAAGCAGCAACGCAAAACTAAGTAGCTTCCTTCTAGAACAGACAGCCGGCTTAAAAGACAGCTTGAAGGAAGCTGAAGATAAGTTAATTATTGCTAGTTCCGAGGCCTTCACTGTGAGGGAAAAGGTCAGTGCACTTGAGGAGCAGCATAATGTTGAAGTCAGTGAATTGGAAAATGTTATTGCTGATCTGAAAGATAATGTATCAAAAGCTGAAGCTAGGGCCAAGAATGCAGAAGCCAAAAGCAAATTATTAACAGAGACTAATACGGAACTTAATGAAGAGCTCGGACTTCTTAAAAGCGCTGGCAGTCCCTTGGATATGGTGGATTCACTTGAGAGAAAGTTACGGGAATCTAATATCCAGTTACAGCATGCAGTGGCATCTGCTGAAGCTAGCCAGGAGAAACAGAACATGTTGTATTCTACAATCACTGACATGGACAGTGTGATTGAGGATCTAAAGCAGAAGGTTTTAAAAGCTGAAAATCGGGCTGACTTAACGGAAGACAAGTGTATAATTTTATCAGAGTCCAATGCAGATCTAAATGAGGAAATAAGCTTTCTGAGGGGTAGATTGGAATGCTTGGAGGCATCTTTACATCAAGCCGAGGAAGTAAGAATAGCTACTGCGGCTGATATTGGTCTTCGGTCCAAAGTTCTTACAAATTTATTGATGCAACTTGCTTTTGAGAGAGAGCGCCTTCATAAGCAGATCTCTTCTTTAGCGATGGAGAATAAAACTTTAAAGCTGAAGTTGCAAACAAACAATTCTCGTTCTGTGGTCATCGGGAATGATGAAAGAGAAAGTTGTAAAGATTCGAAGCATGAAATGGCTACTGGTACAAGAGAAACTAAGGAAGAAGATGAGTCTGCTAGCAATTCTAAGCTGGATAGGACTCAGAACAATGCATCTGTTGGTGAGAGTCGTGAGACTAGAGTGGAACGTACTGATTCTACATCTGAGTTCGCGACCGTGAGGAGAATAGATGCAGGAGTGCTAAGCCTTAAGCATTTACTCATGGCAACGTTCATTCTACTGGTTTCGGCTGGAGCTTATCTTTTTCTCCAACAAGACTGCCCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0012505 GO:0016020 GO:0031090 GO:0031965 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

747

Amino Acids

83.2

Weight (kDa)

4.84

Isoelectric Point (pI)

52.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002372)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11390
fragaria_vesca	FvH4_2g13612 FvH4_6g46070 FvH4_6g46070 FvH4_6g46070 FvH4_6g46070 FvH4_6g46070 FvH4_6g46070 FvH4_6g46070 FvH4_6g46070 FvH4_6g46070 FvH4_6g46070 FvH4_6g46070
malus_domestica	MD09G1077300.v1.1 MD17G1067700.v1.1
prunus_persica	Prupe.3G246700_v2.0.a1
pyrus_communis	pycom09g00440 pycom17g06810
rosa_chinensis	RchiOBHm_Chr2g0164391 RchiOBHm_Chr6g0275231
rosa_laevigata	RLG00000013484 RLG00000021457
rosa_multiflora	Rmu_sc0009487.1_g000004 Rmu_sc0010331.1_g000002 Rmu_sc0015626.1_g000002 Rmu_sc0022221.1_g000006 Rmu_ssc0000041.1_g000026
rosa_roxburghii	Rroxscaffold_2G00086600 Rroxscaffold_7G00193530
rosa_rugosa	Rorug02G0508300 Rorug06G0090400
rosa_samantha	Rh2AG576300 Rh2BG587300 Rh2CG558100 Rh2DG597000 Rh6AG203700 Rh6BG206600 Rh6CG209200 Rh6DG199200
rosa_wichuraiana	Rw2G047730 Rw2G047830 Rw6G017690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1042
AccII	CGCG	2 cut(s)	599, 2123
AciI	CCGC	7 cut(s)	12, 153, 278, 599, 962, 1144, 1784
AclI	AACGTT	1 cut(s)	2180
AclWI	GGATC	2 cut(s)	870, 1617
AcsI	RAATTY	2 cut(s)	486, 1819
AcuI	CTGAAG	6 cut(s)	1031, 1143, 1248, 1386, 1563, 1925
AfaI	GTAC	3 cut(s)	581, 1996, 2101
AfeI	AGCGCT	1 cut(s)	1456
AfiI	CCNNNNNNNGG	1 cut(s)	229
AflII	CTTAAG	1 cut(s)	2159
AflIII	ACRYGT	2 cut(s)	576, 1566
AjnI	CCWGG	4 cut(s)	222, 392, 555, 1551
AjuI	GAANNNNNNNTTGG	2 cut(s)	732, 764
Alw21I	GWGCWC	5 cut(s)	97, 779, 924, 1288, 1440
Alw26I	GTCTC	3 cut(s)	268, 1406, 2078
Alw44I	GTGCAC	2 cut(s)	920, 1284
AlwI	GGATC	2 cut(s)	870, 1617
Ama87I	CYCGRG	1 cut(s)	318
Aor51HI	AGCGCT	1 cut(s)	1456
AoxI	GGCC	3 cut(s)	657, 1257, 1374
ApaLI	GTGCAC	2 cut(s)	920, 1284
ApeKI	GCWGC	2 cut(s)	1158, 1297
ApoI	RAATTY	2 cut(s)	486, 1819
AspLEI	GCGC	2 cut(s)	1457, 1854
AspS9I	GGNCC	3 cut(s)	1009, 1374, 1803
AsuHPI	GGTGA	3 cut(s)	538, 613, 2084
AsuII	TTCGAA	1 cut(s)	1973
AsuNHI	GCTAGC	2 cut(s)	1547, 2027
AvaI	CYCGRG	1 cut(s)	318
AvaII	GGWCC	2 cut(s)	1009, 1803
BaeGI	GKGCMC	3 cut(s)	556, 924, 1288
BanII	GRGCYC	2 cut(s)	97, 1440
BbsI	GAAGAC	2 cut(s)	1665, 1790
Bbv12I	GWGCWC	5 cut(s)	97, 779, 924, 1288, 1440
BbvI	GCAGC	2 cut(s)	1170, 1309
BccI	CCATC	6 cut(s)	68, 266, 667, 853, 1009, 1876
BcgI	CGANNNNNNTGC	2 cut(s)	5, 39
BciT130I	CCWGG	4 cut(s)	224, 394, 557, 1553
BciVI	GTATCC	1 cut(s)	555
BcoDI	GTCTC	3 cut(s)	268, 1406, 2078
BfaI	CTAG	8 cut(s)	329, 836, 1187, 1248, 1371, 1548, 2028, 2088
BfoI	RGCGCY	2 cut(s)	1458, 1855
BfrI	CTTAAG	1 cut(s)	2159
BfuI	GTATCC	1 cut(s)	555
BglII	AGATCT	3 cut(s)	904, 1693, 1866
BisI	GCNGC	4 cut(s)	963, 1159, 1298, 1785
BlpI	GCTNAGC	3 cut(s)	1080, 1092, 2153
BlsI	GCNGC	4 cut(s)	964, 1160, 1299, 1786
Bme1390I	CCNGG	4 cut(s)	224, 394, 557, 1553
Bme18I	GGWCC	2 cut(s)	1009, 1803
BmeT110I	CYCGRG	1 cut(s)	318
BmgT120I	GGNCC	3 cut(s)	1009, 1374, 1803
BmrFI	CCNGG	4 cut(s)	224, 394, 557, 1553
BmrI	ACTGGG	1 cut(s)	109
BmtI	GCTAGC	2 cut(s)	1551, 2031
BmuI	ACTGGG	1 cut(s)	109
BpiI	GAAGAC	2 cut(s)	1665, 1790
BpmI	CTGGAG	3 cut(s)	674, 1040, 2223
Bpu1102I	GCTNAGC	3 cut(s)	1080, 1092, 2153
Bpu14I	TTCGAA	1 cut(s)	1973
BpuEI	CTTGAG	3 cut(s)	473, 1310, 1508
Bsa29I	ATCGAT	1 cut(s)	334
BsaAI	YACGTR	2 cut(s)	142, 579
BsaJI	CCNNGG	6 cut(s)	393, 555, 556, 1254, 1467, 1761
BsaXI	ACNNNNNCTCC	4 cut(s)	389, 419, 579, 609
Bsc4I	CCNNNNNNNGG	1 cut(s)	229
Bse118I	RCCGGY	1 cut(s)	1199
Bse1I	ACTGG	6 cut(s)	115, 549, 1057, 1516, 1996, 2196
Bse3DI	GCAATG	1 cut(s)	1139
BseBI	CCWGG	4 cut(s)	224, 394, 557, 1553
BseCI	ATCGAT	1 cut(s)	334
BseDI	CCNNGG	6 cut(s)	393, 555, 556, 1254, 1467, 1761
BseGI	GGATG	3 cut(s)	678, 766, 837
BseLI	CCNNNNNNNGG	1 cut(s)	229
BseMI	GCAATG	1 cut(s)	1139
BseNI	ACTGG	6 cut(s)	115, 549, 1057, 1516, 1996, 2196
BseRI	GAGGAG	3 cut(s)	968, 1307, 2146
BseSI	GKGCMC	3 cut(s)	556, 924, 1288
BseXI	GCAGC	2 cut(s)	1170, 1309
Bsh1236I	CGCG	2 cut(s)	599, 2123
Bsh1285I	CGRYCG	1 cut(s)	2127
BshFI	GGCC	3 cut(s)	659, 1259, 1376
BshVI	ATCGAT	1 cut(s)	334
BsiEI	CGRYCG	1 cut(s)	2127
BsiHKAI	GWGCWC	5 cut(s)	97, 779, 924, 1288, 1440
BsiHKCI	CYCGRG	1 cut(s)	318
BsiSI	CCGG	1 cut(s)	1200
BslFI	GGGAC	1 cut(s)	1449
BslI	CCNNNNNNNGG	1 cut(s)	229
BsmAI	GTCTC	3 cut(s)	268, 1406, 2078
BsmFI	GGGAC	1 cut(s)	1449
BsmI	GAATGC	2 cut(s)	1387, 1739
BsnI	GGCC	3 cut(s)	659, 1259, 1376
BsoBI	CYCGRG	1 cut(s)	318
Bsp119I	TTCGAA	1 cut(s)	1973
Bsp1286I	GDGCHC	6 cut(s)	97, 556, 779, 924, 1288, 1440
Bsp1720I	GCTNAGC	3 cut(s)	1080, 1092, 2153
Bsp68I	TCGCGA	1 cut(s)	2123
BspACI	CCGC	7 cut(s)	12, 153, 278, 599, 962, 1144, 1784
BspANI	GGCC	3 cut(s)	659, 1259, 1376
BspDI	ATCGAT	1 cut(s)	334
BspFNI	CGCG	2 cut(s)	599, 2123
BspHI	TCATGA	1 cut(s)	181
BspOI	GCTAGC	2 cut(s)	1551, 2031
BspPI	GGATC	2 cut(s)	870, 1617
BspQI	GCTCTTC	2 cut(s)	423, 1428
BspT104I	TTCGAA	1 cut(s)	1973
BspTI	CTTAAG	1 cut(s)	2159
BsrDI	GCAATG	1 cut(s)	1139
BsrFI	RCCGGY	1 cut(s)	1199
BsrI	ACTGG	6 cut(s)	115, 549, 1057, 1516, 1996, 2196
BssAI	RCCGGY	1 cut(s)	1199
BssECI	CCNNGG	6 cut(s)	393, 555, 556, 1254, 1467, 1761
BssT1I	CCWWGG	1 cut(s)	1467
Bst2UI	CCWGG	4 cut(s)	224, 394, 557, 1553
Bst4CI	ACNGT	5 cut(s)	595, 1115, 1267, 1598, 2128
Bst6I	CTCTTC	5 cut(s)	57, 423, 931, 1428, 1876
BstAFI	CTTAAG	1 cut(s)	2159
BstAPI	GCANNNNNTGC	1 cut(s)	998
BstBAI	YACGTR	2 cut(s)	142, 579
BstBI	TTCGAA	1 cut(s)	1973
BstC8I	GCNNGC	8 cut(s)	93, 247, 990, 1201, 1459, 1527, 1549, 2029
BstF5I	GGATG	3 cut(s)	678, 766, 837
BstFNI	CGCG	2 cut(s)	599, 2123
BstH2I	RGCGCY	2 cut(s)	1458, 1855
BstHHI	GCGC	2 cut(s)	1457, 1854
BstMAI	GTCTC	3 cut(s)	268, 1406, 2078
BstMCI	CGRYCG	1 cut(s)	2127
BstMWI	GCNNNNNNNGC	5 cut(s)	968, 998, 1382, 1784, 1909
BstNI	CCWGG	4 cut(s)	224, 394, 557, 1553
BstNSI	RCATGY	3 cut(s)	386, 1529, 1570
BstSCI	CCNGG	4 cut(s)	222, 392, 555, 1551
BstSLI	GKGCMC	3 cut(s)	556, 924, 1288
BstUI	CGCG	2 cut(s)	599, 2123
BstV1I	GCAGC	2 cut(s)	1170, 1309
BstV2I	GAAGAC	2 cut(s)	1665, 1790
BstX2I	RGATCY	5 cut(s)	862, 904, 1609, 1693, 1866
BstYI	RGATCY	5 cut(s)	862, 904, 1609, 1693, 1866
Bsu15I	ATCGAT	1 cut(s)	334
BsuI	GTATCC	1 cut(s)	555
BsuRI	GGCC	3 cut(s)	659, 1259, 1376
BsuTUI	ATCGAT	1 cut(s)	334
BtgZI	GCGATG	1 cut(s)	1895
BtsCI	GGATG	3 cut(s)	678, 766, 837
BtsI	GCAGTG	1 cut(s)	1536
BtsIMutI	CAGTG	7 cut(s)	556, 1263, 1288, 1321, 1536, 1584, 1603
BtuMI	TCGCGA	1 cut(s)	2123
Cac8I	GCNNGC	8 cut(s)	93, 247, 990, 1201, 1459, 1527, 1549, 2029
CciI	TCATGA	1 cut(s)	181
CfoI	GCGC	2 cut(s)	1457, 1854
Cfr10I	RCCGGY	1 cut(s)	1199
Cfr13I	GGNCC	3 cut(s)	1009, 1374, 1803
ClaI	ATCGAT	1 cut(s)	334
Csp6I	GTAC	3 cut(s)	580, 1995, 2100
CviQI	GTAC	3 cut(s)	580, 1995, 2100
DraI	TTTAAA	3 cut(s)	1068, 1629, 1899
Eam1104I	CTCTTC	5 cut(s)	57, 423, 931, 1428, 1876
EarI	CTCTTC	5 cut(s)	57, 423, 931, 1428, 1876
Ecl136II	GAGCTC	2 cut(s)	95, 1438
Eco130I	CCWWGG	1 cut(s)	1467
Eco147I	AGGCCT	2 cut(s)	659, 1259
Eco24I	GRGCYC	2 cut(s)	97, 1440
Eco47I	GGWCC	2 cut(s)	1009, 1803
Eco47III	AGCGCT	1 cut(s)	1456
Eco53kI	GAGCTC	2 cut(s)	95, 1438
Eco57I	CTGAAG	6 cut(s)	1031, 1143, 1248, 1386, 1563, 1925
Eco88I	CYCGRG	1 cut(s)	318
EcoICRI	GAGCTC	2 cut(s)	95, 1438
EcoO109I	RGGNCCY	1 cut(s)	1009
EcoRII	CCWGG	4 cut(s)	222, 392, 555, 1551
EcoT14I	CCWWGG	1 cut(s)	1467
EcoT22I	ATGCAT	3 cut(s)	384, 1003, 2065
EcoT38I	GRGCYC	2 cut(s)	97, 1440
ErhI	CCWWGG	1 cut(s)	1467
FaqI	GGGAC	1 cut(s)	1449
FauI	CCCGC	1 cut(s)	19
FblI	GTMKAC	1 cut(s)	1042
Fnu4HI	GCNGC	4 cut(s)	963, 1159, 1298, 1785
FokI	GGATG	3 cut(s)	685, 773, 844
FriOI	GRGCYC	2 cut(s)	97, 1440
Fsp4HI	GCNGC	4 cut(s)	963, 1159, 1298, 1785
FspBI	CTAG	8 cut(s)	329, 836, 1187, 1248, 1371, 1548, 2028, 2088
GlaI	GCGC	2 cut(s)	1456, 1853
GluI	GCNGC	4 cut(s)	963, 1159, 1298, 1785
GsuI	CTGGAG	3 cut(s)	674, 1040, 2223
HaeII	RGCGCY	2 cut(s)	1458, 1855
HaeIII	GGCC	3 cut(s)	659, 1259, 1376
HapII	CCGG	1 cut(s)	1200
HhaI	GCGC	2 cut(s)	1457, 1854
Hin6I	GCGC	2 cut(s)	1455, 1852
HinP1I	GCGC	2 cut(s)	1455, 1852
HindIII	AAGCTT	2 cut(s)	1148, 1711
HpaII	CCGG	1 cut(s)	1200
HphI	GGTGA	3 cut(s)	538, 613, 2084
Hpy166II	GTNNAC	5 cut(s)	6, 145, 922, 1043, 1286
Hpy8I	GTNNAC	5 cut(s)	6, 145, 922, 1043, 1286
HpyAV	CCTTC	7 cut(s)	451, 835, 1193, 1213, 1270, 1615, 1865
HpyCH4III	ACNGT	5 cut(s)	595, 1115, 1267, 1598, 2128
HpyCH4IV	ACGT	4 cut(s)	141, 578, 2098, 2180
HpyF10VI	GCNNNNNNNGC	5 cut(s)	968, 998, 1382, 1784, 1909
HpySE526I	ACGT	4 cut(s)	141, 578, 2098, 2180
HspAI	GCGC	2 cut(s)	1455, 1852
KroI	GCCGGC	1 cut(s)	1199
KroNI	GCCGGC	1 cut(s)	1201
LguI	GCTCTTC	2 cut(s)	423, 1428
LmnI	GCTCC	4 cut(s)	100, 931, 1294, 2204
Lsp1109I	GCAGC	2 cut(s)	1170, 1309
MaeI	CTAG	8 cut(s)	329, 836, 1187, 1248, 1371, 1548, 2028, 2088
MaeII	ACGT	4 cut(s)	141, 578, 2098, 2180
MaeIII	GTNAC	3 cut(s)	473, 1497, 1518
MflI	RGATCY	5 cut(s)	862, 904, 1609, 1693, 1866
MhlI	GDGCHC	6 cut(s)	97, 556, 779, 924, 1288, 1440
MlyI	GAGTC	6 cut(s)	488, 617, 1691, 2030, 2044, 2086
MmeI	TCCRAC	1 cut(s)	122
Mph1103I	ATGCAT	3 cut(s)	384, 1003, 2065
MroNI	GCCGGC	1 cut(s)	1199
MslI	CAYNNNNRTG	2 cut(s)	703, 1589
MspCI	CTTAAG	1 cut(s)	2159
MspI	CCGG	1 cut(s)	1200
MspR9I	CCNGG	4 cut(s)	224, 394, 557, 1553
Mva1269I	GAATGC	2 cut(s)	1387, 1739
MvaI	CCWGG	4 cut(s)	224, 394, 557, 1553
MvnI	CGCG	2 cut(s)	599, 2123
MwoI	GCNNNNNNNGC	5 cut(s)	968, 998, 1382, 1784, 1909
NaeI	GCCGGC	1 cut(s)	1201
NgoMIV	GCCGGC	1 cut(s)	1199
NheI	GCTAGC	2 cut(s)	1547, 2027
NmeAIII	GCCGAG	1 cut(s)	1786
NmuCI	GTSAC	1 cut(s)	473
NruI	TCGCGA	1 cut(s)	2123
NsiI	ATGCAT	3 cut(s)	384, 1003, 2065
NspI	RCATGY	3 cut(s)	386, 1529, 1570
NspV	TTCGAA	1 cut(s)	1973
PaeI	GCATGC	1 cut(s)	1529
PagI	TCATGA	1 cut(s)	181
PasI	CCCWGGG	1 cut(s)	556
PceI	AGGCCT	2 cut(s)	659, 1259
PciI	ACATGT	1 cut(s)	1566
PciSI	GCTCTTC	2 cut(s)	423, 1428
PctI	GAATGC	2 cut(s)	1387, 1739
PdiI	GCCGGC	1 cut(s)	1201
PfeI	GAWTC	9 cut(s)	104, 136, 233, 677, 685, 1481, 1505, 1970, 2105
PkrI	GCNGC	4 cut(s)	964, 1160, 1299, 1786
PleI	GAGTC	6 cut(s)	488, 617, 1690, 2029, 2044, 2085
PpsI	GAGTC	6 cut(s)	488, 617, 1690, 2029, 2044, 2085
Ppu21I	YACGTR	2 cut(s)	142, 579
PpuMI	RGGWCCY	1 cut(s)	1009
PscI	ACATGT	1 cut(s)	1566
Psp124BI	GAGCTC	2 cut(s)	97, 1440
Psp1406I	AACGTT	1 cut(s)	2180
Psp5II	RGGWCCY	1 cut(s)	1009
Psp6I	CCWGG	4 cut(s)	222, 392, 555, 1551
PspGI	CCWGG	4 cut(s)	222, 392, 555, 1551
PspPI	GGNCC	3 cut(s)	1009, 1374, 1803
PspPPI	RGGWCCY	1 cut(s)	1009
PsuI	RGATCY	5 cut(s)	862, 904, 1609, 1693, 1866
RruI	TCGCGA	1 cut(s)	2123
RsaI	GTAC	3 cut(s)	581, 1996, 2101
RsaNI	GTAC	3 cut(s)	580, 1995, 2100
RseI	CAYNNNNRTG	2 cut(s)	703, 1589
SacI	GAGCTC	2 cut(s)	97, 1440
SapI	GCTCTTC	2 cut(s)	423, 1428
SatI	GCNGC	4 cut(s)	963, 1159, 1298, 1785
Sau96I	GGNCC	3 cut(s)	1009, 1374, 1803
SchI	GAGTC	6 cut(s)	488, 617, 1691, 2030, 2044, 2086
ScrFI	CCNGG	4 cut(s)	224, 394, 557, 1553
SduI	GDGCHC	6 cut(s)	97, 556, 779, 924, 1288, 1440
SfuI	TTCGAA	1 cut(s)	1973
SinI	GGWCC	2 cut(s)	1009, 1803
SmiI	ATTTAAAT	1 cut(s)	1068
SmiMI	CAYNNNNRTG	2 cut(s)	703, 1589
SmlI	CTYRAG	4 cut(s)	452, 1289, 1487, 2159
SmoI	CTYRAG	4 cut(s)	452, 1289, 1487, 2159
SphI	GCATGC	1 cut(s)	1529
SseBI	AGGCCT	2 cut(s)	659, 1259
SsiI	CCGC	7 cut(s)	12, 153, 278, 599, 962, 1144, 1784
SspI	AATATT	1 cut(s)	214
SspMI	CTAG	8 cut(s)	329, 836, 1187, 1248, 1371, 1548, 2028, 2088
SstI	GAGCTC	2 cut(s)	97, 1440
StuI	AGGCCT	2 cut(s)	659, 1259
StyD4I	CCNGG	4 cut(s)	222, 392, 555, 1551
StyI	CCWWGG	1 cut(s)	1467
SwaI	ATTTAAAT	1 cut(s)	1068
TaaI	ACNGT	5 cut(s)	595, 1115, 1267, 1598, 2128
TaiI	ACGT	4 cut(s)	144, 581, 2101, 2183
TaqI	TCGA	4 cut(s)	236, 334, 773, 1973
TaqII	GACCGA	1 cut(s)	1791
TauI	GCSGC	2 cut(s)	965, 1787
TfiI	GAWTC	9 cut(s)	104, 136, 233, 677, 685, 1481, 1505, 1970, 2105
TscAI	CASTG	7 cut(s)	556, 1270, 1288, 1321, 1536, 1591, 1603
TseFI	GTSAC	1 cut(s)	473
TseI	GCWGC	2 cut(s)	1158, 1297
Tsp45I	GTSAC	1 cut(s)	473
TspDTI	ATGAA	8 cut(s)	198, 561, 678, 1446, 1847, 1965, 1995, 2173
TspGWI	ACGGA	3 cut(s)	729, 1436, 1670
TspRI	CASTG	7 cut(s)	556, 1270, 1288, 1321, 1536, 1591, 1603
Vha464I	CTTAAG	1 cut(s)	2159
VneI	GTGCAC	2 cut(s)	920, 1284
VpaK11BI	GGWCC	2 cut(s)	1009, 1803
XapI	RAATTY	2 cut(s)	486, 1819
XbaI	TCTAGA	1 cut(s)	1186
XceI	RCATGY	3 cut(s)	386, 1529, 1570
XmiI	GTMKAC	1 cut(s)	1042
XspI	CTAG	8 cut(s)	329, 836, 1187, 1248, 1371, 1548, 2028, 2088
Zsp2I	ATGCAT	3 cut(s)	384, 1003, 2065

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.