RchiOBHm_Chr2g0164391

WPP domain-interacting tail-anchored protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0002372
Physical Location & Seq
Forward (+)
79521605 .. 79526329
4725 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53245

Sequence Viewer

Length: 2172 bp
ATGCCACCGACCCGACTCAACCCGTTTTGTCACAGTAGGATTCAGCTGGAGACGGTTTTTGTCTCAAAGGTCCCGTCTTTTTCATCCATTTGCTCTCTCCAACACCAACACAACAATCCCAAACCAACTTTTTCTCTCTCTCACAGGTTTCGGAACCATTTGAATAGTTGCATCGTTAAAATGGATTATGATGGTACTCATGAAGCAAGTGTTTCTGGCAATGATGTTAATGTTGAGGTCCCGGTAGTGGAGTCGAAGAGAGTGGAGGGTCTTGAAAGGGTCTCATCTGGTGTGGTTATTGGAGAATTACAAAATGTGGGGGAGGTTATAATCAGAGTTGAATTGGATCTAGCACGCGCTTCCGAGAAGTTGCTTAATTTAAAAGGTTTTATGATGCATGTGGGAACCAAGGAGAGTGACTTTGAGGCCTTTATATCCAAGGAAGAGCAGACATCAGTTGATTCTGCTGAGAGGGCTCTGGAGTTCACTCTCTTATCTGGAATTTTAGACTCTGAGGTGAGTGAATTGGATAAGCTCATCGCTTTACTTCAAATGGAGATCACGGCTGCCCAGGAGCTACTATCTTCATACACATACTGGGGAGAAACATTTGCAGTAATGGAAGAAAAGCTGCAGGATTCTGAACAATCTTTGGAGCAGTTGCAAGAACAGGTCTCTGAAATCCGGATGCAATCTCTGAAGTTCCAGAGGACCTTTTCATGCTCCAATGGAGAAGAAAATTCGAATAACGACAAAGGAGTGGGCCATTTAGATGATGATATATTTTCAAGCAAGAATGTACTTATGAAAATGCAAACTGTTGAACAGCAAAGACATATTTTGAGGATGCTAGAGAAATCTTTGGCAAGAGAAATGGATCTTGAAAAGAAATTGACTGAATCAAAACAAGTTGAAGAGGATCTGAAATTGAGACTACTCTCGTCAGAACAAGAGGCATATTGCATGGAGGATGAAGCAGCCGATGTTTGGGAGAGGTGGTTAGAGGCAGATAATGCATCTGGGGTCATGATGGGTATTTCAAAGGAACTACTGGGTAGACTCCAGATTCTCCAGTTTAATTTAAATGGTTCAGTTCAGCGAGAAGCTGAGCTACAATTGAAGGTGGATGCTCTCCTTAAATCCAACCAAAGCTCTTTGCAGAAGCTTGAAAGTAGCAATGCAAAACTTAATGACTTCTTTCAAGCACAGACAGAGAGCTTAAAAGACAGCTTGAAGGAAGCTGAAGATAAGTTAATTATTGCCAATTCTGAGGCCTTTACTCTGAGCGAAAAGGTGAGTTCGCTTGAAGATGAAATCAGTGAAATGGGAAATGTTATTACAGATCTGAAAGAGAAAGAATCAAAAGCTGAAGCCCAATTGAAATTATTAACAGAGACTAACACTGAACTTAATGAAGAGCTCGGGCTTCTTAAGACGCAGTTAACAGAATCTGACATGTGGTTGCAGCATGCAGTGGCAACTGCTGAAGCTAGCCAGGAGAAACAAAACATGTTGAATTCGACTATCAGGGACATGGAAAATGTGATAAAGGATCTAAAGCAGAAGGTTTCAAAAGCTGAAAGTCGGGCTGACAGTGTAGAGGACAAGTGTGTATTAATATCAGAATCTAATGCAGCACTAAATGAGGAACTAAGCTTTCTGACTGGTAGATTGAAACGCGTGGAGGCAGCTTTGCATCAAGCTGAGGAAGCAAAAGTAGCTACTGCAACTGATATTGCACTCCGGTCAAAAGTTATTACAAACTTGATTGTACAACTTGCTTTTGAAAGAGAGCGCCTTCATAAGCAGATGACTGCTTTGACAATGGAGAACAAAACTCTGATTCTGAAGTTACAGATGAACAATAGTCCATCTGTGGTTATGCGCAATGATGATAGAGGAAATGGTGAAGACTTCATGCTCTCAAAGCACGATTTGGTTACTGGTACAACAGAAAGTAGGGAGGAAGCTCATGAGTTGTCTGCTTGCAATTCTAAGCTGGATAGGACTCAAAAAAATGCTTCTATGGGTGAGACTGAAGAGGGACCTGCTGATACTGTGAGGAGAGTTGATGCAGGAGTTCTGAACTTTAAGCATGTACTTATGGCAATGCTCATTGTACTGATTTCAGCTGCAGTTTATTTCTTTACTCAACAACACTGCCCATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0012505 GO:0016020 GO:0031090 GO:0031965 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

723

Amino Acids

81.36

Weight (kDa)

4.91

Isoelectric Point (pI)

43.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WIT1_2_N PF26581 104 - 241 7.2e-54 WIT1/2, N-terminal helical bundle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 329
Acc16I TGCGCA 1 cut(s) 1886
Acc36I ACCTGC 1 cut(s) 2056
AccI GTMKAC 1 cut(s) 1057
AccII CGCG 2 cut(s) 357, 1680
AccIII TCCGGA 1 cut(s) 684
AclWI GGATC 4 cut(s) 354, 885, 927, 1560
AcsI RAATTY 3 cut(s) 501, 739, 1516
AcuI CTGAAG 6 cut(s) 719, 1263, 1389, 1506, 1868, 2058
AfaI GTAC 6 cut(s) 196, 801, 1773, 1948, 2100, 2121
AfiI CCNNNNNNNGG 2 cut(s) 247, 987
AflII CTTAAG 1 cut(s) 1430
AflIII ACRYGT 3 cut(s) 1455, 1509, 1678
AjnI CCWGG 2 cut(s) 570, 1494
Alw21I GWGCWC 1 cut(s) 1422
Alw26I GTCTC 7 cut(s) 44, 67, 286, 679, 925, 1388, 2027
AlwI GGATC 4 cut(s) 354, 885, 927, 1560
AlwNI CAGNNNCTG 1 cut(s) 1451
Ama87I CYCGRG 1 cut(s) 1421
Aor13HI TCCGGA 1 cut(s) 684
AoxI GGCC 3 cut(s) 426, 763, 1272
ApeKI GCWGC 7 cut(s) 566, 631, 977, 1465, 1634, 1688, 2132
ApoI RAATTY 3 cut(s) 501, 739, 1516
ArsI GACNNNNNNTTYG 2 cut(s) 59, 91
AseI ATTAAT 1 cut(s) 1616
AspLEI GCGC 3 cut(s) 359, 1797, 1887
AspS9I GGNCC 5 cut(s) 70, 238, 711, 763, 2045
AsuC2I CCSGG 1 cut(s) 242
AsuHPI GGTGA 4 cut(s) 529, 1306, 1919, 2042
AsuII TTCGAA 1 cut(s) 743
AsuNHI GCTAGC 1 cut(s) 1490
AvaI CYCGRG 1 cut(s) 1421
AvaII GGWCC 4 cut(s) 70, 238, 711, 2045
BanII GRGCYC 2 cut(s) 478, 1422
BarI GAAGNNNNNNTAC 2 cut(s) 1095, 1127
BbsI GAAGAC 1 cut(s) 1917
Bbv12I GWGCWC 1 cut(s) 1422
BbvCI CCTCAGC 1 cut(s) 1704
BbvI GCAGC 7 cut(s) 553, 618, 989, 1477, 1646, 1700, 2119
BccI CCATC 3 cut(s) 185, 1024, 1879
BceAI ACGGC 1 cut(s) 579
BciT130I CCWGG 2 cut(s) 572, 1496
BcnI CCSGG 1 cut(s) 242
BcoDI GTCTC 7 cut(s) 44, 67, 286, 679, 925, 1388, 2027
BfaI CTAG 3 cut(s) 350, 851, 1491
BfmI CTRYAG 2 cut(s) 632, 2133
BfoI RGCGCY 1 cut(s) 1798
BfrI CTTAAG 1 cut(s) 1430
BfuAI ACCTGC 1 cut(s) 2056
BglII AGATCT 1 cut(s) 1342
BisI GCNGC 7 cut(s) 567, 632, 978, 1466, 1635, 1689, 2133
BlpI GCTNAGC 1 cut(s) 1107
BlsI GCNGC 7 cut(s) 568, 633, 979, 1467, 1636, 1690, 2134
Bme1390I CCNGG 3 cut(s) 242, 572, 1496
Bme18I GGWCC 4 cut(s) 70, 238, 711, 2045
BmeT110I CYCGRG 1 cut(s) 1421
BmgT120I GGNCC 5 cut(s) 70, 238, 711, 763, 2045
BmiI GGNNCC 5 cut(s) 72, 155, 240, 406, 2046
BmrFI CCNGG 3 cut(s) 242, 572, 1496
BmrI ACTGGG 2 cut(s) 607, 1061
BmsI GCATC 8 cut(s) 180, 384, 678, 837, 1025, 1117, 1705, 2062
BmtI GCTAGC 1 cut(s) 1494
BmuI ACTGGG 2 cut(s) 607, 1061
BpiI GAAGAC 1 cut(s) 1917
BpmI CTGGAG 4 cut(s) 68, 500, 1046, 1055
Bpu10I CCTNAGC 1 cut(s) 1704
Bpu1102I GCTNAGC 1 cut(s) 1107
Bpu14I TTCGAA 1 cut(s) 743
BpuMI CCSGG 1 cut(s) 242
BsaI GGTCTC 2 cut(s) 286, 679
BsaJI CCNNGG 3 cut(s) 408, 438, 570
BsaWI WCCGGW 2 cut(s) 684, 1743
BsaXI ACNNNNNCTCC 2 cut(s) 983, 1013
Bsc4I CCNNNNNNNGG 2 cut(s) 247, 987
Bse1I ACTGG 5 cut(s) 602, 1056, 1072, 1669, 1948
Bse3DI GCAATG 4 cut(s) 226, 1183, 1894, 2115
BseAI TCCGGA 1 cut(s) 684
BseBI CCWGG 2 cut(s) 572, 1496
BseDI CCNNGG 3 cut(s) 408, 438, 570
BseGI GGATG 5 cut(s) 83, 693, 852, 976, 1132
BseLI CCNNNNNNNGG 2 cut(s) 247, 987
BseMI GCAATG 4 cut(s) 226, 1183, 1894, 2115
BseMII CTCAG 6 cut(s) 459, 504, 1098, 1260, 1274, 1695
BseNI ACTGG 5 cut(s) 602, 1056, 1072, 1669, 1948
BseRI GAGGAG 1 cut(s) 2077
BseXI GCAGC 7 cut(s) 553, 618, 989, 1477, 1646, 1700, 2119
Bsh1236I CGCG 2 cut(s) 357, 1680
BshFI GGCC 3 cut(s) 428, 765, 1274
BsiHKAI GWGCWC 1 cut(s) 1422
BsiHKCI CYCGRG 1 cut(s) 1421
BsiSI CCGG 3 cut(s) 242, 685, 1744
BslFI GGGAC 4 cut(s) 56, 224, 1544, 2058
BslI CCNNNNNNNGG 2 cut(s) 247, 987
BsmAI GTCTC 7 cut(s) 44, 67, 286, 679, 925, 1388, 2027
BsmBI CGTCTC 1 cut(s) 44
BsmFI GGGAC 4 cut(s) 56, 224, 1544, 2058
BsnI GGCC 3 cut(s) 428, 765, 1274
Bso31I GGTCTC 2 cut(s) 286, 679
BsoBI CYCGRG 1 cut(s) 1421
Bsp119I TTCGAA 1 cut(s) 743
Bsp1286I GDGCHC 2 cut(s) 478, 1422
Bsp13I TCCGGA 1 cut(s) 684
Bsp1407I TGTACA 1 cut(s) 1771
Bsp143I GATC 6 cut(s) 346, 558, 877, 919, 1342, 1552
Bsp1720I GCTNAGC 1 cut(s) 1107
BspANI GGCC 3 cut(s) 428, 765, 1274
BspCNI CTCAG 6 cut(s) 460, 505, 1099, 1261, 1275, 1696
BspEI TCCGGA 1 cut(s) 684
BspFNI CGCG 2 cut(s) 357, 1680
BspHI TCATGA 3 cut(s) 199, 1026, 1972
BspLI GGNNCC 5 cut(s) 72, 155, 240, 406, 2046
BspMAI CTGCAG 2 cut(s) 636, 2137
BspMI ACCTGC 1 cut(s) 2056
BspOI GCTAGC 1 cut(s) 1494
BspPI GGATC 4 cut(s) 354, 885, 927, 1560
BspQI GCTCTTC 2 cut(s) 438, 1410
BspT104I TTCGAA 1 cut(s) 743
BspTI CTTAAG 1 cut(s) 1430
BspTNI GGTCTC 2 cut(s) 286, 679
BsrDI GCAATG 4 cut(s) 226, 1183, 1894, 2115
BsrGI TGTACA 1 cut(s) 1771
BsrI ACTGG 5 cut(s) 602, 1056, 1072, 1669, 1948
BssECI CCNNGG 3 cut(s) 408, 438, 570
BssMI GATC 6 cut(s) 346, 558, 877, 919, 1342, 1552
BssT1I CCWWGG 2 cut(s) 408, 438
Bst2UI CCWGG 2 cut(s) 572, 1496
Bst4CI ACNGT 5 cut(s) 35, 55, 820, 1595, 2059
Bst6I CTCTTC 5 cut(s) 251, 438, 909, 1410, 2034
BstAFI CTTAAG 1 cut(s) 1430
BstAPI GCANNNNNTGC 1 cut(s) 1013
BstAUI TGTACA 1 cut(s) 1771
BstBI TTCGAA 1 cut(s) 743
BstC8I GCNNGC 4 cut(s) 355, 1470, 1492, 1987
BstDEI CTNAG 8 cut(s) 468, 513, 1107, 1269, 1283, 1652, 1704, 1995
BstF5I GGATG 5 cut(s) 83, 693, 852, 976, 1132
BstFNI CGCG 2 cut(s) 357, 1680
BstH2I RGCGCY 1 cut(s) 1798
BstHHI GCGC 3 cut(s) 359, 1797, 1887
BstKTI GATC 6 cut(s) 349, 561, 880, 922, 1345, 1555
BstMAI GTCTC 7 cut(s) 44, 67, 286, 679, 925, 1388, 2027
BstMBI GATC 6 cut(s) 346, 558, 877, 919, 1342, 1552
BstMWI GCNNNNNNNGC 5 cut(s) 473, 1013, 1709, 1718, 1927
BstNI CCWGG 2 cut(s) 572, 1496
BstNSI RCATGY 5 cut(s) 401, 1459, 1472, 1513, 2099
BstSCI CCNGG 3 cut(s) 240, 570, 1494
BstSFI CTRYAG 2 cut(s) 632, 2133
BstUI CGCG 2 cut(s) 357, 1680
BstV1I GCAGC 7 cut(s) 553, 618, 989, 1477, 1646, 1700, 2119
BstV2I GAAGAC 1 cut(s) 1917
BstX2I RGATCY 5 cut(s) 346, 877, 919, 1342, 1552
BstYI RGATCY 5 cut(s) 346, 877, 919, 1342, 1552
BsuRI GGCC 3 cut(s) 428, 765, 1274
BtgZI GCGATG 1 cut(s) 523
BtsCI GGATG 5 cut(s) 83, 693, 852, 976, 1132
BtsI GCAGTG 2 cut(s) 1479, 2158
BtsIMutI CAGTG 5 cut(s) 1324, 1401, 1479, 1600, 2158
BveI ACCTGC 1 cut(s) 2056
Cac8I GCNNGC 4 cut(s) 355, 1470, 1492, 1987
CaiI CAGNNNCTG 1 cut(s) 1451
CciI TCATGA 3 cut(s) 199, 1026, 1972
CfoI GCGC 3 cut(s) 359, 1797, 1887
Cfr13I GGNCC 5 cut(s) 70, 238, 711, 763, 2045
CseI GACGC 1 cut(s) 1444
Csp6I GTAC 6 cut(s) 195, 800, 1772, 1947, 2099, 2120
CviQI GTAC 6 cut(s) 195, 800, 1772, 1947, 2099, 2120
DdeI CTNAG 8 cut(s) 468, 513, 1107, 1269, 1283, 1652, 1704, 1995
DpnI GATC 6 cut(s) 348, 560, 879, 921, 1344, 1554
DpnII GATC 6 cut(s) 346, 558, 877, 919, 1342, 1552
DraI TTTAAA 2 cut(s) 381, 1083
Eam1104I CTCTTC 5 cut(s) 251, 438, 909, 1410, 2034
EarI CTCTTC 5 cut(s) 251, 438, 909, 1410, 2034
Ecl136II GAGCTC 1 cut(s) 1420
Eco130I CCWWGG 2 cut(s) 408, 438
Eco147I AGGCCT 2 cut(s) 428, 1274
Eco24I GRGCYC 2 cut(s) 478, 1422
Eco31I GGTCTC 2 cut(s) 286, 679
Eco47I GGWCC 4 cut(s) 70, 238, 711, 2045
Eco53kI GAGCTC 1 cut(s) 1420
Eco57I CTGAAG 6 cut(s) 719, 1263, 1389, 1506, 1868, 2058
Eco88I CYCGRG 1 cut(s) 1421
EcoICRI GAGCTC 1 cut(s) 1420
EcoO109I RGGNCCY 4 cut(s) 70, 238, 711, 2045
EcoRI GAATTC 1 cut(s) 1516
EcoRII CCWGG 2 cut(s) 570, 1494
EcoT14I CCWWGG 2 cut(s) 408, 438
EcoT22I ATGCAT 2 cut(s) 399, 1018
EcoT38I GRGCYC 2 cut(s) 478, 1422
ErhI CCWWGG 2 cut(s) 408, 438
Esp3I CGTCTC 1 cut(s) 44
FaqI GGGAC 4 cut(s) 56, 224, 1544, 2058
FblI GTMKAC 1 cut(s) 1057
Fnu4HI GCNGC 7 cut(s) 567, 632, 978, 1466, 1635, 1689, 2133
FokI GGATG 5 cut(s) 70, 700, 859, 983, 1139
FriOI GRGCYC 2 cut(s) 478, 1422
Fsp4HI GCNGC 7 cut(s) 567, 632, 978, 1466, 1635, 1689, 2133
FspBI CTAG 3 cut(s) 350, 851, 1491
FspI TGCGCA 1 cut(s) 1886
GlaI GCGC 3 cut(s) 358, 1796, 1886
GluI GCNGC 7 cut(s) 567, 632, 978, 1466, 1635, 1689, 2133
GsuI CTGGAG 4 cut(s) 68, 500, 1046, 1055
HaeII RGCGCY 1 cut(s) 1798
HaeIII GGCC 3 cut(s) 428, 765, 1274
HapII CCGG 3 cut(s) 242, 685, 1744
HgaI GACGC 1 cut(s) 1444
HhaI GCGC 3 cut(s) 359, 1797, 1887
Hin6I GCGC 3 cut(s) 357, 1795, 1885
HinP1I GCGC 3 cut(s) 357, 1795, 1885
HincII GTYRAC 1 cut(s) 1443
HindII GTYRAC 1 cut(s) 1443
HindIII AAGCTT 2 cut(s) 1163, 1654
HpaI GTTAAC 1 cut(s) 1443
HpaII CCGG 3 cut(s) 242, 685, 1744
HphI GGTGA 4 cut(s) 529, 1306, 1919, 2042
Hpy166II GTNNAC 3 cut(s) 486, 1058, 1443
Hpy8I GTNNAC 3 cut(s) 486, 1058, 1443
HpyAV CCTTC 4 cut(s) 1114, 1228, 1558, 1808
HpyCH4III ACNGT 5 cut(s) 35, 55, 820, 1595, 2059
HpyF10VI GCNNNNNNNGC 5 cut(s) 473, 1013, 1709, 1718, 1927
HpyF3I CTNAG 8 cut(s) 468, 513, 1107, 1269, 1283, 1652, 1704, 1995
HspAI GCGC 3 cut(s) 357, 1795, 1885
Kpn2I TCCGGA 1 cut(s) 684
KspAI GTTAAC 1 cut(s) 1443
Kzo9I GATC 6 cut(s) 346, 558, 877, 919, 1342, 1552
LguI GCTCTTC 2 cut(s) 438, 1410
LmnI GCTCC 3 cut(s) 574, 655, 728
Lsp1109I GCAGC 7 cut(s) 553, 618, 989, 1477, 1646, 1700, 2119
LweI GCATC 8 cut(s) 180, 384, 678, 837, 1025, 1117, 1705, 2062
MaeI CTAG 3 cut(s) 350, 851, 1491
MaeIII GTNAC 4 cut(s) 29, 416, 1851, 1939
MalI GATC 6 cut(s) 348, 560, 879, 921, 1344, 1554
MboI GATC 6 cut(s) 346, 558, 877, 919, 1342, 1552
MfeI CAATTG 2 cut(s) 1115, 1376
MflI RGATCY 5 cut(s) 346, 877, 919, 1342, 1552
MhlI GDGCHC 2 cut(s) 478, 1422
MluI ACGCGT 1 cut(s) 1678
MlyI GAGTC 5 cut(s) 9, 260, 503, 1053, 2002
MmeI TCCRAC 2 cut(s) 124, 1167
Mph1103I ATGCAT 2 cut(s) 399, 1018
MroI TCCGGA 1 cut(s) 684
MslI CAYNNNNRTG 1 cut(s) 771
MspA1I CMGCKG 2 cut(s) 46, 2132
MspCI CTTAAG 1 cut(s) 1430
MspI CCGG 3 cut(s) 242, 685, 1744
MspR9I CCNGG 3 cut(s) 242, 572, 1496
MunI CAATTG 2 cut(s) 1115, 1376
MvaI CCWGG 2 cut(s) 572, 1496
MvnI CGCG 2 cut(s) 357, 1680
MwoI GCNNNNNNNGC 5 cut(s) 473, 1013, 1709, 1718, 1927
NciI CCSGG 1 cut(s) 242
NdeII GATC 6 cut(s) 346, 558, 877, 919, 1342, 1552
NheI GCTAGC 1 cut(s) 1490
NlaIV GGNNCC 5 cut(s) 72, 155, 240, 406, 2046
NmuCI GTSAC 2 cut(s) 29, 416
NsbI TGCGCA 1 cut(s) 1886
NsiI ATGCAT 2 cut(s) 399, 1018
NspI RCATGY 5 cut(s) 401, 1459, 1472, 1513, 2099
NspV TTCGAA 1 cut(s) 743
PaeI GCATGC 1 cut(s) 1472
PagI TCATGA 3 cut(s) 199, 1026, 1972
PceI AGGCCT 2 cut(s) 428, 1274
PciI ACATGT 2 cut(s) 1455, 1509
PciSI GCTCTTC 2 cut(s) 438, 1410
PfeI GAWTC 9 cut(s) 40, 461, 638, 899, 1066, 1358, 1448, 1625, 1843
PkrI GCNGC 7 cut(s) 568, 633, 979, 1467, 1636, 1690, 2134
PleI GAGTC 5 cut(s) 9, 259, 503, 1053, 2002
PpsI GAGTC 5 cut(s) 9, 259, 503, 1053, 2002
PpuMI RGGWCCY 4 cut(s) 70, 238, 711, 2045
PscI ACATGT 2 cut(s) 1455, 1509
PshBI ATTAAT 1 cut(s) 1616
PsiI TTATAA 1 cut(s) 329
Psp124BI GAGCTC 1 cut(s) 1422
Psp5II RGGWCCY 4 cut(s) 70, 238, 711, 2045
Psp6I CCWGG 2 cut(s) 570, 1494
PspGI CCWGG 2 cut(s) 570, 1494
PspN4I GGNNCC 5 cut(s) 72, 155, 240, 406, 2046
PspPI GGNCC 5 cut(s) 70, 238, 711, 763, 2045
PspPPI RGGWCCY 4 cut(s) 70, 238, 711, 2045
PstI CTGCAG 2 cut(s) 636, 2137
PstNI CAGNNNCTG 1 cut(s) 1451
PsuI RGATCY 5 cut(s) 346, 877, 919, 1342, 1552
PvuII CAGCTG 2 cut(s) 46, 2132
RsaI GTAC 6 cut(s) 196, 801, 1773, 1948, 2100, 2121
RsaNI GTAC 6 cut(s) 195, 800, 1772, 1947, 2099, 2120
RseI CAYNNNNRTG 1 cut(s) 771
SacI GAGCTC 1 cut(s) 1422
SapI GCTCTTC 2 cut(s) 438, 1410
SatI GCNGC 7 cut(s) 567, 632, 978, 1466, 1635, 1689, 2133
Sau3AI GATC 6 cut(s) 346, 558, 877, 919, 1342, 1552
Sau96I GGNCC 5 cut(s) 70, 238, 711, 763, 2045
SchI GAGTC 5 cut(s) 9, 260, 503, 1053, 2002
ScrFI CCNGG 3 cut(s) 242, 572, 1496
SduI GDGCHC 2 cut(s) 478, 1422
SfaNI GCATC 8 cut(s) 180, 384, 678, 837, 1025, 1117, 1705, 2062
SfcI CTRYAG 2 cut(s) 632, 2133
SfuI TTCGAA 1 cut(s) 743
SinI GGWCC 4 cut(s) 70, 238, 711, 2045
SmiI ATTTAAAT 1 cut(s) 1083
SmiMI CAYNNNNRTG 1 cut(s) 771
SmlI CTYRAG 1 cut(s) 1430
SmoI CTYRAG 1 cut(s) 1430
SphI GCATGC 1 cut(s) 1472
SseBI AGGCCT 2 cut(s) 428, 1274
SspMI CTAG 3 cut(s) 350, 851, 1491
SstI GAGCTC 1 cut(s) 1422
StuI AGGCCT 2 cut(s) 428, 1274
StyD4I CCNGG 3 cut(s) 240, 570, 1494
StyI CCWWGG 2 cut(s) 408, 438
SwaI ATTTAAAT 1 cut(s) 1083
TaaI ACNGT 5 cut(s) 35, 55, 820, 1595, 2059
TaqI TCGA 3 cut(s) 254, 743, 1520
TatI WGTACW 4 cut(s) 799, 1771, 2098, 2119
TfiI GAWTC 9 cut(s) 40, 461, 638, 899, 1066, 1358, 1448, 1625, 1843
TscAI CASTG 5 cut(s) 1324, 1408, 1479, 1600, 2165
TseFI GTSAC 2 cut(s) 29, 416
TseI GCWGC 7 cut(s) 566, 631, 977, 1465, 1634, 1688, 2132
Tsp45I GTSAC 2 cut(s) 29, 416
TspRI CASTG 5 cut(s) 1324, 1408, 1479, 1600, 2165
Vha464I CTTAAG 1 cut(s) 1430
VpaK11BI GGWCC 4 cut(s) 70, 238, 711, 2045
VspI ATTAAT 1 cut(s) 1616
XapI RAATTY 3 cut(s) 501, 739, 1516
XceI RCATGY 5 cut(s) 401, 1459, 1472, 1513, 2099
XmiI GTMKAC 1 cut(s) 1057
XspI CTAG 3 cut(s) 350, 851, 1491
Zsp2I ATGCAT 2 cut(s) 399, 1018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.