Rh2DG597000

WPP domain-interacting tail-anchored protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0002372
Physical Location & Seq
Forward (+)
82967883 .. 82975709
7827 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG597000.1

Sequence Viewer

Length: 2175 bp
ATGCCACCGACCCGACTCAACCCGTTTTGTCACAGTAGGATTCAGCTGGAGACGGTTTTTTGTCTCAAAGGTCCCGTCTTTTTCATCCATTTGCTCTCTCCAACACCAACACCAACACAAGAATCCCAAACCAACTTTTTCTCTCACAGGTTTCGGAACCATTTGAATAGTTGCATCGTTAAAATGGATTATGATGGTACTCATGAAGCAACTGTTTCTGGCAATGATGTTAATGTTGAGGTCCCGGTAGTGGAGTCGAAGAGAGTGGAGGGTCTTGAAAGGGTCTCATCTGGTGTGGTTATTGGAGAATTACAAAATGTGGGGGAGGTTATAATCGGAGTTGAATTGGATCTAGCACGCGCTTCCGAGAAGTTGCTTAATTTAAAAGGTTTTATGATGCATGTGGGAACCAAGGAGAGTGACTTTGAGGCCTTTATATCCAAGGAAGAGCAGACATCAGTTGATTCTGCTGAGAGGGCTCTGGAGTTCACTCTCTTATCTGGAATTTTAGACTCTGAGGTGAGTGAATTGGATAAGCTCATCGCTTTACTTCAAATGGAGATCACGGCTGCCCAGGAGCTACTATCTTCATACACATACGTGGGAGAAACATTTGCAGTAATGGAAGAAAAGCTGCAGGATTCTGAACAATCTTTGGAGCAGTTGCAAGAACAGGTCTCTGAAATCCGGATGCAATCTCTGAAGTTCCAGAGGACCTTTTCATGCTCCGATGGAGAAGAAAATTCGAATAACAACAAAGGAGTGGGCCATTTAGATGATGATATATTTTCAAGCAAGAATGTACTTATGAAAATGCAAACTGTTGAACAGCAAAGACATATTTTGAGGATGCTAGAGAAATCTTTGGCAAGAGAAATGGATCTTGAAAAGAAATTGACTGAATCAAAACAAGTTGAAGAGGATCTGAAATTGAGACTACTCTCGTCAGAACAAGAGGCATATTGCATGGAGGATGAAGCAGTCGATGTTTGGGAGAGGTGGTTAGAGGCAGATAATGCATCTGGGGTCATGATGGGTATTTCAAAGGAACTACTGGGTAGACTCCAGATTCTCCAGTTTAATTTAAATGGTTCAGTTCAGCGAGAAGCTGAGCTACAATTGAAGGTGGATGCTCTCCTTAAATCCAACCAAAGCTCTTTGCAGAAGCTTGAAAGTAGCAATGCAAAACTTAATGACTTCTTTCAAGCACAGACAGAGAGCTTAAAAGACAGCTTGAAGGAAGCTGAAGATAAGTTAATTATTGCCAATTCTGAGGCCTTTACTCTGGGCGAAAAGGTGAGTTCGCTTGAAGATGAAATCAGTGAAATGGGAAATGTTATTACAGATCTGAAAGAGAAAGAATCAAAAGCTGAAGCCCAATTGAAATTATTAACAGAGACTAACACTGAACTTAATGAAGAGCTCGGGCTTCTTAAGACGCAGTTAACAGAATCTGACATGCGGTTGCAGCATGCAGTGGCAACTGCTGAAGCTAGCCAGGAGAAACAAAACATGTTGAATTCGACTATCAGGGACATGGAAAATGTGATAAAGGATCTAAAGCAGAAGGTTTCAAAAGCTGAAAGTCGGGCTGACAGTGTAGAGGACAAGTGTGTATCAATATCAGAATCTAATGCAGCACTAAATGAGGAACTAAGCTTTCTGACGGGTAGATTGAAACGCATGGAGGCAGCTTTGCATCAAGCTGAGGAAGCAAAAGTAGCTACTGCAACTGATATTGCACTCCGGTCAAAAGTTATTACAAACTTGATTGTACAACTTGCTTTTGAAAGAGAGCGCCTTCATAATCAGATGACTGCTTTGACAATGGAGAACAAAACTCTGATTCTGAAGTTGCAAATGAACAATAGTCCATCTGTGGTTATGCGCAATGATGATAGAGGAAATGGTGAAGACTTCATGCTCTCAAAGCACGATTTGGCTACTGGTACAACAGAAAGTAGGGAGGAAGCTCATGAGTTGTCTGCTTGCAATTCTAAGCTGAATAGGACTCAAAAAAATGCTTCTATGGGTGAGACTGAGGTGGGACCCGCTGATACTGTGAGGAGAGTTGATGCAGGAGTTCTGAACTTTAAGCATGTACTCATGGCAATGCTCATTGTACTGATTTCAGCTGCAGTTTATTTCTTTACTCAACAACACTGCCCATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0012505 GO:0016020 GO:0031090 GO:0031965 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

724

Amino Acids

81.25

Weight (kDa)

4.87

Isoelectric Point (pI)

42.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WIT1_2_N PF26581 105 - 242 6.6e-53 WIT1/2, N-terminal helical bundle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 332
Acc16I TGCGCA 1 cut(s) 1889
AccI GTMKAC 1 cut(s) 1060
AccII CGCG 1 cut(s) 360
AccIII TCCGGA 1 cut(s) 687
AciI CCGC 2 cut(s) 1462, 2052
AclWI GGATC 4 cut(s) 357, 888, 930, 1563
AcsI RAATTY 3 cut(s) 504, 742, 1519
AcuI CTGAAG 5 cut(s) 722, 1266, 1392, 1509, 1871
AfaI GTAC 6 cut(s) 199, 804, 1776, 1951, 2103, 2124
AfiI CCNNNNNNNGG 1 cut(s) 250
AflII CTTAAG 1 cut(s) 1433
AflIII ACRYGT 1 cut(s) 1512
AjnI CCWGG 2 cut(s) 573, 1497
AleI CACNNNNGTG 1 cut(s) 599
Alw21I GWGCWC 1 cut(s) 1425
Alw26I GTCTC 7 cut(s) 44, 68, 289, 682, 928, 1391, 2030
AlwI GGATC 4 cut(s) 357, 888, 930, 1563
AlwNI CAGNNNCTG 1 cut(s) 1454
Ama87I CYCGRG 1 cut(s) 1424
Aor13HI TCCGGA 1 cut(s) 687
AoxI GGCC 3 cut(s) 429, 766, 1275
ApeKI GCWGC 6 cut(s) 569, 634, 1468, 1637, 1691, 2135
ApoI RAATTY 3 cut(s) 504, 742, 1519
ArsI GACNNNNNNTTYG 2 cut(s) 60, 92
AspLEI GCGC 3 cut(s) 362, 1800, 1890
AspS9I GGNCC 5 cut(s) 71, 241, 714, 766, 2048
AsuC2I CCSGG 1 cut(s) 245
AsuHPI GGTGA 4 cut(s) 532, 1309, 1922, 2045
AsuII TTCGAA 1 cut(s) 746
AsuNHI GCTAGC 1 cut(s) 1493
AvaI CYCGRG 1 cut(s) 1424
AvaII GGWCC 4 cut(s) 71, 241, 714, 2048
BanII GRGCYC 2 cut(s) 481, 1425
BarI GAAGNNNNNNTAC 2 cut(s) 1098, 1130
BbsI GAAGAC 1 cut(s) 1920
Bbv12I GWGCWC 1 cut(s) 1425
BbvCI CCTCAGC 1 cut(s) 1707
BbvI GCAGC 6 cut(s) 556, 621, 1480, 1649, 1703, 2122
BccI CCATC 4 cut(s) 188, 725, 1027, 1882
BceAI ACGGC 1 cut(s) 582
BciT130I CCWGG 2 cut(s) 575, 1499
BcnI CCSGG 1 cut(s) 245
BcoDI GTCTC 7 cut(s) 44, 68, 289, 682, 928, 1391, 2030
BfaI CTAG 3 cut(s) 353, 854, 1494
BfmI CTRYAG 2 cut(s) 635, 2136
BfoI RGCGCY 1 cut(s) 1801
BfrI CTTAAG 1 cut(s) 1433
BglII AGATCT 1 cut(s) 1345
BisI GCNGC 6 cut(s) 570, 635, 1469, 1638, 1692, 2136
BlpI GCTNAGC 1 cut(s) 1110
BlsI GCNGC 6 cut(s) 571, 636, 1470, 1639, 1693, 2137
Bme1390I CCNGG 3 cut(s) 245, 575, 1499
Bme18I GGWCC 4 cut(s) 71, 241, 714, 2048
BmeT110I CYCGRG 1 cut(s) 1424
BmgT120I GGNCC 5 cut(s) 71, 241, 714, 766, 2048
BmiI GGNNCC 6 cut(s) 73, 158, 243, 409, 2049, 2050
BmrFI CCNGG 3 cut(s) 245, 575, 1499
BmrI ACTGGG 1 cut(s) 1064
BmsI GCATC 8 cut(s) 183, 387, 681, 840, 1028, 1120, 1708, 2065
BmtI GCTAGC 1 cut(s) 1497
BmuI ACTGGG 1 cut(s) 1064
BpiI GAAGAC 1 cut(s) 1920
BpmI CTGGAG 4 cut(s) 68, 503, 1049, 1058
Bpu10I CCTNAGC 1 cut(s) 1707
Bpu1102I GCTNAGC 1 cut(s) 1110
Bpu14I TTCGAA 1 cut(s) 746
BpuMI CCSGG 1 cut(s) 245
BsaAI YACGTR 1 cut(s) 601
BsaI GGTCTC 2 cut(s) 289, 682
BsaJI CCNNGG 3 cut(s) 411, 441, 573
BsaWI WCCGGW 2 cut(s) 687, 1746
BsaXI ACNNNNNCTCC 2 cut(s) 986, 1016
Bsc4I CCNNNNNNNGG 1 cut(s) 250
Bse1I ACTGG 3 cut(s) 1059, 1075, 1951
Bse3DI GCAATG 4 cut(s) 229, 1186, 1897, 2118
BseAI TCCGGA 1 cut(s) 687
BseBI CCWGG 2 cut(s) 575, 1499
BseDI CCNNGG 3 cut(s) 411, 441, 573
BseGI GGATG 5 cut(s) 84, 696, 855, 979, 1135
BseLI CCNNNNNNNGG 1 cut(s) 250
BseMI GCAATG 4 cut(s) 229, 1186, 1897, 2118
BseMII CTCAG 6 cut(s) 462, 507, 1101, 1263, 1698, 2031
BseNI ACTGG 3 cut(s) 1059, 1075, 1951
BseRI GAGGAG 1 cut(s) 2080
BseXI GCAGC 6 cut(s) 556, 621, 1480, 1649, 1703, 2122
Bsh1236I CGCG 1 cut(s) 360
BshFI GGCC 3 cut(s) 431, 768, 1277
BsiHKAI GWGCWC 1 cut(s) 1425
BsiHKCI CYCGRG 1 cut(s) 1424
BsiSI CCGG 3 cut(s) 245, 688, 1747
BslFI GGGAC 4 cut(s) 57, 227, 1547, 2061
BslI CCNNNNNNNGG 1 cut(s) 250
BsmAI GTCTC 7 cut(s) 44, 68, 289, 682, 928, 1391, 2030
BsmBI CGTCTC 1 cut(s) 44
BsmFI GGGAC 4 cut(s) 57, 227, 1547, 2061
BsnI GGCC 3 cut(s) 431, 768, 1277
Bso31I GGTCTC 2 cut(s) 289, 682
BsoBI CYCGRG 1 cut(s) 1424
Bsp119I TTCGAA 1 cut(s) 746
Bsp1286I GDGCHC 2 cut(s) 481, 1425
Bsp13I TCCGGA 1 cut(s) 687
Bsp1407I TGTACA 1 cut(s) 1774
Bsp143I GATC 6 cut(s) 349, 561, 880, 922, 1345, 1555
Bsp1720I GCTNAGC 1 cut(s) 1110
BspACI CCGC 2 cut(s) 1462, 2052
BspANI GGCC 3 cut(s) 431, 768, 1277
BspCNI CTCAG 6 cut(s) 463, 508, 1102, 1264, 1699, 2032
BspEI TCCGGA 1 cut(s) 687
BspFNI CGCG 1 cut(s) 360
BspHI TCATGA 3 cut(s) 202, 1029, 1975
BspLI GGNNCC 6 cut(s) 73, 158, 243, 409, 2049, 2050
BspMAI CTGCAG 2 cut(s) 639, 2140
BspOI GCTAGC 1 cut(s) 1497
BspPI GGATC 4 cut(s) 357, 888, 930, 1563
BspQI GCTCTTC 2 cut(s) 441, 1413
BspT104I TTCGAA 1 cut(s) 746
BspTI CTTAAG 1 cut(s) 1433
BspTNI GGTCTC 2 cut(s) 289, 682
BsrDI GCAATG 4 cut(s) 229, 1186, 1897, 2118
BsrGI TGTACA 1 cut(s) 1774
BsrI ACTGG 3 cut(s) 1059, 1075, 1951
BssECI CCNNGG 3 cut(s) 411, 441, 573
BssMI GATC 6 cut(s) 349, 561, 880, 922, 1345, 1555
BssT1I CCWWGG 2 cut(s) 411, 441
Bst2UI CCWGG 2 cut(s) 575, 1499
Bst4CI ACNGT 6 cut(s) 35, 55, 214, 823, 1598, 2062
Bst6I CTCTTC 4 cut(s) 254, 441, 912, 1413
BstAFI CTTAAG 1 cut(s) 1433
BstAPI GCANNNNNTGC 1 cut(s) 1016
BstAUI TGTACA 1 cut(s) 1774
BstBAI YACGTR 1 cut(s) 601
BstBI TTCGAA 1 cut(s) 746
BstC8I GCNNGC 4 cut(s) 358, 1473, 1495, 1990
BstDEI CTNAG 8 cut(s) 471, 516, 1110, 1272, 1655, 1707, 1998, 2040
BstF5I GGATG 5 cut(s) 84, 696, 855, 979, 1135
BstFNI CGCG 1 cut(s) 360
BstH2I RGCGCY 1 cut(s) 1801
BstHHI GCGC 3 cut(s) 362, 1800, 1890
BstKTI GATC 6 cut(s) 352, 564, 883, 925, 1348, 1558
BstMAI GTCTC 7 cut(s) 44, 68, 289, 682, 928, 1391, 2030
BstMBI GATC 6 cut(s) 349, 561, 880, 922, 1345, 1555
BstMWI GCNNNNNNNGC 6 cut(s) 476, 1016, 1468, 1712, 1721, 1930
BstNI CCWGG 2 cut(s) 575, 1499
BstNSI RCATGY 5 cut(s) 404, 1462, 1475, 1516, 2102
BstSCI CCNGG 3 cut(s) 243, 573, 1497
BstSFI CTRYAG 2 cut(s) 635, 2136
BstUI CGCG 1 cut(s) 360
BstV1I GCAGC 6 cut(s) 556, 621, 1480, 1649, 1703, 2122
BstV2I GAAGAC 1 cut(s) 1920
BstX2I RGATCY 5 cut(s) 349, 880, 922, 1345, 1555
BstYI RGATCY 5 cut(s) 349, 880, 922, 1345, 1555
BsuRI GGCC 3 cut(s) 431, 768, 1277
BtgZI GCGATG 1 cut(s) 526
BtsCI GGATG 5 cut(s) 84, 696, 855, 979, 1135
BtsI GCAGTG 2 cut(s) 1482, 2161
BtsIMutI CAGTG 5 cut(s) 1327, 1404, 1482, 1603, 2161
Cac8I GCNNGC 4 cut(s) 358, 1473, 1495, 1990
CaiI CAGNNNCTG 1 cut(s) 1454
CciI TCATGA 3 cut(s) 202, 1029, 1975
CfoI GCGC 3 cut(s) 362, 1800, 1890
Cfr13I GGNCC 5 cut(s) 71, 241, 714, 766, 2048
CseI GACGC 1 cut(s) 1447
Csp6I GTAC 6 cut(s) 198, 803, 1775, 1950, 2102, 2123
CviQI GTAC 6 cut(s) 198, 803, 1775, 1950, 2102, 2123
DdeI CTNAG 8 cut(s) 471, 516, 1110, 1272, 1655, 1707, 1998, 2040
DpnI GATC 6 cut(s) 351, 563, 882, 924, 1347, 1557
DpnII GATC 6 cut(s) 349, 561, 880, 922, 1345, 1555
DraI TTTAAA 2 cut(s) 384, 1086
Eam1104I CTCTTC 4 cut(s) 254, 441, 912, 1413
EarI CTCTTC 4 cut(s) 254, 441, 912, 1413
Ecl136II GAGCTC 1 cut(s) 1423
Eco130I CCWWGG 2 cut(s) 411, 441
Eco147I AGGCCT 2 cut(s) 431, 1277
Eco24I GRGCYC 2 cut(s) 481, 1425
Eco31I GGTCTC 2 cut(s) 289, 682
Eco47I GGWCC 4 cut(s) 71, 241, 714, 2048
Eco53kI GAGCTC 1 cut(s) 1423
Eco57I CTGAAG 5 cut(s) 722, 1266, 1392, 1509, 1871
Eco88I CYCGRG 1 cut(s) 1424
EcoICRI GAGCTC 1 cut(s) 1423
EcoO109I RGGNCCY 4 cut(s) 71, 241, 714, 2048
EcoRI GAATTC 1 cut(s) 1519
EcoRII CCWGG 2 cut(s) 573, 1497
EcoT14I CCWWGG 2 cut(s) 411, 441
EcoT22I ATGCAT 2 cut(s) 402, 1021
EcoT38I GRGCYC 2 cut(s) 481, 1425
ErhI CCWWGG 2 cut(s) 411, 441
Esp3I CGTCTC 1 cut(s) 44
FaqI GGGAC 4 cut(s) 57, 227, 1547, 2061
FauI CCCGC 1 cut(s) 2059
FblI GTMKAC 1 cut(s) 1060
Fnu4HI GCNGC 6 cut(s) 570, 635, 1469, 1638, 1692, 2136
FokI GGATG 5 cut(s) 71, 703, 862, 986, 1142
FriOI GRGCYC 2 cut(s) 481, 1425
Fsp4HI GCNGC 6 cut(s) 570, 635, 1469, 1638, 1692, 2136
FspBI CTAG 3 cut(s) 353, 854, 1494
FspI TGCGCA 1 cut(s) 1889
GlaI GCGC 3 cut(s) 361, 1799, 1889
GluI GCNGC 6 cut(s) 570, 635, 1469, 1638, 1692, 2136
GsuI CTGGAG 4 cut(s) 68, 503, 1049, 1058
HaeII RGCGCY 1 cut(s) 1801
HaeIII GGCC 3 cut(s) 431, 768, 1277
HapII CCGG 3 cut(s) 245, 688, 1747
HgaI GACGC 1 cut(s) 1447
HhaI GCGC 3 cut(s) 362, 1800, 1890
Hin6I GCGC 3 cut(s) 360, 1798, 1888
HinP1I GCGC 3 cut(s) 360, 1798, 1888
HincII GTYRAC 1 cut(s) 1446
HindII GTYRAC 1 cut(s) 1446
HindIII AAGCTT 2 cut(s) 1166, 1657
HpaI GTTAAC 1 cut(s) 1446
HpaII CCGG 3 cut(s) 245, 688, 1747
HphI GGTGA 4 cut(s) 532, 1309, 1922, 2045
Hpy166II GTNNAC 3 cut(s) 489, 1061, 1446
Hpy8I GTNNAC 3 cut(s) 489, 1061, 1446
HpyAV CCTTC 4 cut(s) 1117, 1231, 1561, 1811
HpyCH4III ACNGT 6 cut(s) 35, 55, 214, 823, 1598, 2062
HpyCH4IV ACGT 1 cut(s) 600
HpyF10VI GCNNNNNNNGC 6 cut(s) 476, 1016, 1468, 1712, 1721, 1930
HpyF3I CTNAG 8 cut(s) 471, 516, 1110, 1272, 1655, 1707, 1998, 2040
HpySE526I ACGT 1 cut(s) 600
HspAI GCGC 3 cut(s) 360, 1798, 1888
KflI GGGWCCC 1 cut(s) 2048
Kpn2I TCCGGA 1 cut(s) 687
KspAI GTTAAC 1 cut(s) 1446
Kzo9I GATC 6 cut(s) 349, 561, 880, 922, 1345, 1555
LguI GCTCTTC 2 cut(s) 441, 1413
LmnI GCTCC 3 cut(s) 577, 658, 731
Lsp1109I GCAGC 6 cut(s) 556, 621, 1480, 1649, 1703, 2122
LweI GCATC 8 cut(s) 183, 387, 681, 840, 1028, 1120, 1708, 2065
MaeI CTAG 3 cut(s) 353, 854, 1494
MaeII ACGT 1 cut(s) 600
MaeIII GTNAC 2 cut(s) 29, 419
MalI GATC 6 cut(s) 351, 563, 882, 924, 1347, 1557
MboI GATC 6 cut(s) 349, 561, 880, 922, 1345, 1555
MfeI CAATTG 2 cut(s) 1118, 1379
MflI RGATCY 5 cut(s) 349, 880, 922, 1345, 1555
MhlI GDGCHC 2 cut(s) 481, 1425
MlyI GAGTC 5 cut(s) 9, 263, 506, 1056, 2005
MmeI TCCRAC 2 cut(s) 125, 1170
Mph1103I ATGCAT 2 cut(s) 402, 1021
MroI TCCGGA 1 cut(s) 687
MslI CAYNNNNRTG 3 cut(s) 599, 774, 2111
MspA1I CMGCKG 3 cut(s) 46, 2054, 2135
MspCI CTTAAG 1 cut(s) 1433
MspI CCGG 3 cut(s) 245, 688, 1747
MspR9I CCNGG 3 cut(s) 245, 575, 1499
MunI CAATTG 2 cut(s) 1118, 1379
MvaI CCWGG 2 cut(s) 575, 1499
MvnI CGCG 1 cut(s) 360
MwoI GCNNNNNNNGC 6 cut(s) 476, 1016, 1468, 1712, 1721, 1930
NciI CCSGG 1 cut(s) 245
NdeII GATC 6 cut(s) 349, 561, 880, 922, 1345, 1555
NheI GCTAGC 1 cut(s) 1493
NlaIV GGNNCC 6 cut(s) 73, 158, 243, 409, 2049, 2050
NmuCI GTSAC 2 cut(s) 29, 419
NsbI TGCGCA 1 cut(s) 1889
NsiI ATGCAT 2 cut(s) 402, 1021
NspI RCATGY 5 cut(s) 404, 1462, 1475, 1516, 2102
NspV TTCGAA 1 cut(s) 746
OliI CACNNNNGTG 1 cut(s) 599
PaeI GCATGC 1 cut(s) 1475
PagI TCATGA 3 cut(s) 202, 1029, 1975
PceI AGGCCT 2 cut(s) 431, 1277
PciI ACATGT 1 cut(s) 1512
PciSI GCTCTTC 2 cut(s) 441, 1413
PkrI GCNGC 6 cut(s) 571, 636, 1470, 1639, 1693, 2137
PleI GAGTC 5 cut(s) 9, 262, 506, 1056, 2005
PpsI GAGTC 5 cut(s) 9, 262, 506, 1056, 2005
Ppu21I YACGTR 1 cut(s) 601
PpuMI RGGWCCY 4 cut(s) 71, 241, 714, 2048
PscI ACATGT 1 cut(s) 1512
PsiI TTATAA 1 cut(s) 332
Psp124BI GAGCTC 1 cut(s) 1425
Psp5II RGGWCCY 4 cut(s) 71, 241, 714, 2048
Psp6I CCWGG 2 cut(s) 573, 1497
PspGI CCWGG 2 cut(s) 573, 1497
PspN4I GGNNCC 6 cut(s) 73, 158, 243, 409, 2049, 2050
PspPI GGNCC 5 cut(s) 71, 241, 714, 766, 2048
PspPPI RGGWCCY 4 cut(s) 71, 241, 714, 2048
PstI CTGCAG 2 cut(s) 639, 2140
PstNI CAGNNNCTG 1 cut(s) 1454
PsuI RGATCY 5 cut(s) 349, 880, 922, 1345, 1555
PvuII CAGCTG 2 cut(s) 46, 2135
RsaI GTAC 6 cut(s) 199, 804, 1776, 1951, 2103, 2124
RsaNI GTAC 6 cut(s) 198, 803, 1775, 1950, 2102, 2123
RseI CAYNNNNRTG 3 cut(s) 599, 774, 2111
SacI GAGCTC 1 cut(s) 1425
SapI GCTCTTC 2 cut(s) 441, 1413
SatI GCNGC 6 cut(s) 570, 635, 1469, 1638, 1692, 2136
Sau3AI GATC 6 cut(s) 349, 561, 880, 922, 1345, 1555
Sau96I GGNCC 5 cut(s) 71, 241, 714, 766, 2048
SchI GAGTC 5 cut(s) 9, 263, 506, 1056, 2005
ScrFI CCNGG 3 cut(s) 245, 575, 1499
SduI GDGCHC 2 cut(s) 481, 1425
SfaNI GCATC 8 cut(s) 183, 387, 681, 840, 1028, 1120, 1708, 2065
SfcI CTRYAG 2 cut(s) 635, 2136
SfuI TTCGAA 1 cut(s) 746
SinI GGWCC 4 cut(s) 71, 241, 714, 2048
SmiI ATTTAAAT 1 cut(s) 1086
SmiMI CAYNNNNRTG 3 cut(s) 599, 774, 2111
SmlI CTYRAG 1 cut(s) 1433
SmoI CTYRAG 1 cut(s) 1433
SphI GCATGC 1 cut(s) 1475
SseBI AGGCCT 2 cut(s) 431, 1277
SsiI CCGC 2 cut(s) 1462, 2052
SspMI CTAG 3 cut(s) 353, 854, 1494
SstI GAGCTC 1 cut(s) 1425
StuI AGGCCT 2 cut(s) 431, 1277
StyD4I CCNGG 3 cut(s) 243, 573, 1497
StyI CCWWGG 2 cut(s) 411, 441
SwaI ATTTAAAT 1 cut(s) 1086
TaaI ACNGT 6 cut(s) 35, 55, 214, 823, 1598, 2062
TaiI ACGT 1 cut(s) 603
TaqI TCGA 4 cut(s) 257, 746, 984, 1523
TatI WGTACW 4 cut(s) 802, 1774, 2101, 2122
TscAI CASTG 5 cut(s) 1327, 1411, 1482, 1603, 2168
TseFI GTSAC 2 cut(s) 29, 419
TseI GCWGC 6 cut(s) 569, 634, 1468, 1637, 1691, 2135
Tsp45I GTSAC 2 cut(s) 29, 419
TspRI CASTG 5 cut(s) 1327, 1411, 1482, 1603, 2168
Vha464I CTTAAG 1 cut(s) 1433
VpaK11BI GGWCC 4 cut(s) 71, 241, 714, 2048
XapI RAATTY 3 cut(s) 504, 742, 1519
XceI RCATGY 5 cut(s) 404, 1462, 1475, 1516, 2102
XmiI GTMKAC 1 cut(s) 1060
XspI CTAG 3 cut(s) 353, 854, 1494
Zsp2I ATGCAT 2 cut(s) 402, 1021
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.