Prupe.4G018100_v2.0.a1

B-cell receptor-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0003828
Physical Location & Seq
Reverse (-)
844363 .. 846232
1870 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G018100.1

Sequence Viewer

Length: 669 bp
ATGATTCAGCTAATGTTCATAGTGATTTTGTCAGAGATGGCTCTGATACTTGCCTTTTTGTTTAGGACCCCATTTAGGAAGCTGGTAATATTGGGTCTGGATCAGATCAAGCGCGGCCGTGGACCCATTGTGGTCAAGACCGTGGCGGGAACGGTGCTTGTGGCGTTGATGACTAGCGTTTACAGCATAATTAAGATCAAGAATAGTCGGATCGACAAAGCTGCTATTGTTAGTCCCACCGATCAGGTCCTCATGGTCAAGCACCTGCTTGAAGCCACTCTCATGGGATGCTCCCTATTTCTTGCTCTTATGATAGACAGACTACACCACTATATTAGAGAACTTCGTATACGAAGAAAGAGCATGGAAGCCATTAAGAAACAGAACAGAGGATCTGAGGATGGCAAAGCTAGCAGTTTGGATGAGATCAAAGCCTTGGAGAATGAGATAGCTACATCGCGCACAAGACTCAAGCAGCTAGAATCTGAAATTGAGACAAAGACAAAAGACGTTCATACCGCAGAATCCAATGTTCTTGCTCTAAGAAAACAATCGGAAGGGTTTCTTCTTGAATATGATCGATTACTTGAGGAAAATCAAAACTTAAAGAACCAGTTAAAGTCACTGGACCGGAAAATGTCACGTTCAGGTAGTAAGAAAGATTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000139 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0005795 GO:0005811 GO:0005886 GO:0005887 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0007154 GO:0007165 GO:0007204 GO:0007276 GO:0007283 GO:0008104 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009967 GO:0009987 GO:0010604 GO:0010646 GO:0010647 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012505 GO:0016020 GO:0016021 GO:0016192 GO:0019222 GO:0019722 GO:0019725 GO:0019932 GO:0019953 GO:0022414 GO:0023051 GO:0023052 GO:0023056 GO:0030003 GO:0030135 GO:0030136 GO:0030162 GO:0031090 GO:0031224 GO:0031226 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031410 GO:0031982 GO:0031984 GO:0031985 GO:0032268 GO:0032270 GO:0032386 GO:0032388 GO:0032434 GO:0032436 GO:0032469 GO:0032471 GO:0032501 GO:0032504 GO:0032580 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033365 GO:0034613 GO:0035556 GO:0035584 GO:0042175 GO:0042176 GO:0042287 GO:0042288 GO:0042592 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043280 GO:0043281 GO:0044093 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0044703 GO:0044877 GO:0045732 GO:0045862 GO:0046907 GO:0048193 GO:0048232 GO:0048471 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048609 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051049 GO:0051050 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051246 GO:0051247 GO:0051336 GO:0051345 GO:0051480 GO:0051560 GO:0051561 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0052547 GO:0052548 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0060255 GO:0060341 GO:0061136 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070727 GO:0070861 GO:0070863 GO:0070972 GO:0070973 GO:0071944 GO:0072503 GO:0072507 GO:0080090 GO:0080134 GO:0080135 GO:0090087 GO:0090316 GO:0097038 GO:0097708 GO:0098588 GO:0098771 GO:0098791 GO:0098827 GO:1901800 GO:1902531 GO:1902533 GO:1903050 GO:1903052 GO:1903069 GO:1903071 GO:1903362 GO:1903364 GO:1903827 GO:1903829 GO:1904152 GO:1904154 GO:1904292 GO:1904294 GO:1904951 GO:1905897 GO:1905898 GO:2000058 GO:2000060 GO:2000116 GO:2001056 GO:2001233 GO:2001235 GO:2001242 GO:2001244
KEGG Pathways
Metabolic & Signaling
ko04141 ko05165 map04141 map05165
Pfam Domains
Protein Families
Bap31

Protein Analysis

223

Amino Acids

25.24

Weight (kDa)

9.85

Isoelectric Point (pI)

41.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 273
Acc36I ACCTGC 1 cut(s) 273
AccI GTMKAC 1 cut(s) 349
AccII CGCG 2 cut(s) 114, 460
AciI CCGC 3 cut(s) 114, 146, 519
AclWI GGATC 3 cut(s) 108, 218, 400
AcoI YGGCCR 1 cut(s) 115
AfiI CCNNNNNNNGG 1 cut(s) 75
AgsI TTSAA 2 cut(s) 272, 572
AluBI AGCT 6 cut(s) 10, 82, 221, 410, 452, 478
AluI AGCT 6 cut(s) 10, 82, 221, 410, 452, 478
Alw26I GTCTC 1 cut(s) 488
AlwI GGATC 3 cut(s) 108, 218, 400
AoxI GGCC 1 cut(s) 115
ApeKI GCWGC 2 cut(s) 221, 475
Asp700I GAANNNNTTC 1 cut(s) 561
AspLEI GCGC 2 cut(s) 114, 462
AspS9I GGNCC 4 cut(s) 66, 122, 247, 628
AsuNHI GCTAGC 1 cut(s) 410
AvaII GGWCC 4 cut(s) 66, 122, 247, 628
BbvI GCAGC 2 cut(s) 208, 487
BccI CCATC 2 cut(s) 31, 395
BceAI ACGGC 1 cut(s) 102
BcgI CGANNNNNNTGC 2 cut(s) 203, 237
BcoDI GTCTC 1 cut(s) 488
BfaI CTAG 3 cut(s) 174, 411, 479
BfuAI ACCTGC 1 cut(s) 273
BisI GCNGC 3 cut(s) 115, 222, 476
BlsI GCNGC 3 cut(s) 116, 223, 477
Bme18I GGWCC 4 cut(s) 66, 122, 247, 628
BmgT120I GGNCC 4 cut(s) 66, 122, 247, 628
BmiI GGNNCC 2 cut(s) 68, 124
BmsI GCATC 1 cut(s) 278
BmtI GCTAGC 1 cut(s) 414
BpuEI CTTGAG 2 cut(s) 455, 608
Bsa29I ATCGAT 1 cut(s) 580
BsaJI CCNNGG 3 cut(s) 118, 141, 435
BsaWI WCCGGW 1 cut(s) 630
Bsc4I CCNNNNNNNGG 1 cut(s) 75
Bse1I ACTGG 2 cut(s) 613, 630
BseCI ATCGAT 1 cut(s) 580
BseDI CCNNGG 3 cut(s) 118, 141, 435
BseGI GGATG 3 cut(s) 293, 406, 427
BseLI CCNNNNNNNGG 1 cut(s) 75
BseMII CTCAG 1 cut(s) 387
BseNI ACTGG 2 cut(s) 613, 630
BseX3I CGGCCG 1 cut(s) 115
BseXI GCAGC 2 cut(s) 208, 487
Bsh1236I CGCG 2 cut(s) 114, 460
Bsh1285I CGRYCG 1 cut(s) 118
BshFI GGCC 1 cut(s) 117
BshVI ATCGAT 1 cut(s) 580
BsiEI CGRYCG 1 cut(s) 118
BsiSI CCGG 1 cut(s) 631
BslFI GGGAC 1 cut(s) 219
BslI CCNNNNNNNGG 1 cut(s) 75
BsmAI GTCTC 1 cut(s) 488
BsmFI GGGAC 1 cut(s) 219
BsnI GGCC 1 cut(s) 117
Bsp143I GATC 8 cut(s) 100, 105, 195, 210, 241, 392, 426, 577
BspACI CCGC 3 cut(s) 114, 146, 519
BspANI GGCC 1 cut(s) 117
BspCNI CTCAG 1 cut(s) 388
BspDI ATCGAT 1 cut(s) 580
BspFNI CGCG 2 cut(s) 114, 460
BspLI GGNNCC 2 cut(s) 68, 124
BspMI ACCTGC 1 cut(s) 273
BspOI GCTAGC 1 cut(s) 414
BspPI GGATC 3 cut(s) 108, 218, 400
BsrI ACTGG 2 cut(s) 613, 630
BssECI CCNNGG 3 cut(s) 118, 141, 435
BssMI GATC 8 cut(s) 100, 105, 195, 210, 241, 392, 426, 577
BssNAI GTATAC 1 cut(s) 350
BssT1I CCWWGG 1 cut(s) 435
Bst1107I GTATAC 1 cut(s) 350
Bst4CI ACNGT 2 cut(s) 142, 154
BstC8I GCNNGC 1 cut(s) 412
BstDEI CTNAG 2 cut(s) 396, 542
BstDSI CCRYGG 2 cut(s) 118, 141
BstF5I GGATG 3 cut(s) 293, 406, 427
BstFNI CGCG 2 cut(s) 114, 460
BstHHI GCGC 2 cut(s) 114, 462
BstKTI GATC 8 cut(s) 103, 108, 198, 213, 244, 395, 429, 580
BstMAI GTCTC 1 cut(s) 488
BstMBI GATC 8 cut(s) 100, 105, 195, 210, 241, 392, 426, 577
BstMCI CGRYCG 1 cut(s) 118
BstMWI GCNNNNNNNGC 2 cut(s) 183, 411
BstUI CGCG 2 cut(s) 114, 460
BstV1I GCAGC 2 cut(s) 208, 487
BstX2I RGATCY 1 cut(s) 392
BstXI CCANNNNNNTGG 1 cut(s) 283
BstYI RGATCY 1 cut(s) 392
BstZ17I GTATAC 1 cut(s) 350
BstZI CGGCCG 1 cut(s) 115
Bsu15I ATCGAT 1 cut(s) 580
BsuRI GGCC 1 cut(s) 117
BsuTUI ATCGAT 1 cut(s) 580
BtgI CCRYGG 2 cut(s) 118, 141
BtgZI GCGATG 1 cut(s) 441
BtsCI GGATG 3 cut(s) 293, 406, 427
BtsIMutI CAGTG 1 cut(s) 623
BveI ACCTGC 1 cut(s) 273
Cac8I GCNNGC 1 cut(s) 412
CfoI GCGC 2 cut(s) 114, 462
Cfr13I GGNCC 4 cut(s) 66, 122, 247, 628
ClaI ATCGAT 1 cut(s) 580
CviAII CATG 3 cut(s) 253, 283, 364
DdeI CTNAG 2 cut(s) 396, 542
DpnI GATC 8 cut(s) 102, 107, 197, 212, 243, 394, 428, 579
DpnII GATC 8 cut(s) 100, 105, 195, 210, 241, 392, 426, 577
EaeI YGGCCR 1 cut(s) 115
EagI CGGCCG 1 cut(s) 115
EclXI CGGCCG 1 cut(s) 115
Eco130I CCWWGG 1 cut(s) 435
Eco47I GGWCC 4 cut(s) 66, 122, 247, 628
Eco52I CGGCCG 1 cut(s) 115
EcoO109I RGGNCCY 2 cut(s) 66, 247
EcoT14I CCWWGG 1 cut(s) 435
ErhI CCWWGG 1 cut(s) 435
FaeI CATG 3 cut(s) 256, 286, 367
FalI AAGNNNNNCTT 2 cut(s) 549, 581
FaqI GGGAC 1 cut(s) 219
FatI CATG 3 cut(s) 252, 282, 363
FauI CCCGC 1 cut(s) 139
FblI GTMKAC 1 cut(s) 349
Fnu4HI GCNGC 3 cut(s) 115, 222, 476
FokI GGATG 3 cut(s) 300, 413, 434
Fsp4HI GCNGC 3 cut(s) 115, 222, 476
FspBI CTAG 3 cut(s) 174, 411, 479
GlaI GCGC 2 cut(s) 113, 461
GluI GCNGC 3 cut(s) 115, 222, 476
HaeIII GGCC 1 cut(s) 117
HapII CCGG 1 cut(s) 631
HhaI GCGC 2 cut(s) 114, 462
Hin1II CATG 3 cut(s) 256, 286, 367
Hin6I GCGC 2 cut(s) 112, 460
HinP1I GCGC 2 cut(s) 112, 460
HinfI GANTC 5 cut(s) 4, 468, 482, 524, 662
HpaII CCGG 1 cut(s) 631
Hpy166II GTNNAC 3 cut(s) 122, 181, 350
Hpy188I TCNGA 7 cut(s) 34, 45, 105, 210, 397, 487, 556
Hpy188III TCNNGA 4 cut(s) 98, 136, 199, 569
Hpy8I GTNNAC 3 cut(s) 122, 181, 350
HpyAV CCTTC 1 cut(s) 551
HpyCH4III ACNGT 2 cut(s) 142, 154
HpyCH4IV ACGT 2 cut(s) 510, 643
HpyF10VI GCNNNNNNNGC 2 cut(s) 183, 411
HpyF3I CTNAG 2 cut(s) 396, 542
HpySE526I ACGT 2 cut(s) 510, 643
Hsp92II CATG 3 cut(s) 256, 286, 367
HspAI GCGC 2 cut(s) 112, 460
Kzo9I GATC 8 cut(s) 100, 105, 195, 210, 241, 392, 426, 577
LmnI GCTCC 1 cut(s) 296
LpnPI CCDG 8 cut(s) 68, 83, 230, 278, 611, 626, 633, 644
Lsp1109I GCAGC 2 cut(s) 208, 487
LweI GCATC 1 cut(s) 278
MaeI CTAG 3 cut(s) 174, 411, 479
MaeII ACGT 2 cut(s) 510, 643
MaeIII GTNAC 2 cut(s) 621, 639
MalI GATC 8 cut(s) 102, 107, 197, 212, 243, 394, 428, 579
MboI GATC 8 cut(s) 100, 105, 195, 210, 241, 392, 426, 577
MboII GAAGA 2 cut(s) 366, 557
MflI RGATCY 1 cut(s) 392
MluCI AATT 2 cut(s) 189, 489
MlyI GAGTC 1 cut(s) 462
MmeI TCCRAC 1 cut(s) 188
MnlI CCTC 4 cut(s) 260, 383, 391, 583
MroXI GAANNNNTTC 1 cut(s) 561
MseI TTAA 4 cut(s) 192, 375, 605, 617
MslI CAYNNNNRTG 1 cut(s) 281
MspI CCGG 1 cut(s) 631
MvnI CGCG 2 cut(s) 114, 460
MwoI GCNNNNNNNGC 2 cut(s) 183, 411
NdeII GATC 8 cut(s) 100, 105, 195, 210, 241, 392, 426, 577
NheI GCTAGC 1 cut(s) 410
NlaIII CATG 3 cut(s) 256, 286, 367
NlaIV GGNNCC 2 cut(s) 68, 124
NmuCI GTSAC 2 cut(s) 621, 639
PaqCI CACCTGC 1 cut(s) 273
PdmI GAANNNNTTC 1 cut(s) 561
PfeI GAWTC 4 cut(s) 4, 482, 524, 662
PkrI GCNGC 3 cut(s) 116, 223, 477
PleI GAGTC 1 cut(s) 462
PpsI GAGTC 1 cut(s) 462
PpuMI RGGWCCY 2 cut(s) 66, 247
Psp5II RGGWCCY 2 cut(s) 66, 247
PspN4I GGNNCC 2 cut(s) 68, 124
PspPI GGNCC 4 cut(s) 66, 122, 247, 628
PspPPI RGGWCCY 2 cut(s) 66, 247
PsrI GAACNNNNNNTAC 2 cut(s) 333, 365
PsuI RGATCY 1 cut(s) 392
RseI CAYNNNNRTG 1 cut(s) 281
SaqAI TTAA 4 cut(s) 192, 375, 605, 617
SatI GCNGC 3 cut(s) 115, 222, 476
Sau3AI GATC 8 cut(s) 100, 105, 195, 210, 241, 392, 426, 577
Sau96I GGNCC 4 cut(s) 66, 122, 247, 628
SchI GAGTC 1 cut(s) 462
SfaNI GCATC 1 cut(s) 278
SinI GGWCC 4 cut(s) 66, 122, 247, 628
SmiMI CAYNNNNRTG 1 cut(s) 281
SmlI CTYRAG 2 cut(s) 470, 587
SmoI CTYRAG 2 cut(s) 470, 587
Sse9I AATT 2 cut(s) 189, 489
SsiI CCGC 3 cut(s) 114, 146, 519
SspI AATATT 1 cut(s) 90
SspMI CTAG 3 cut(s) 174, 411, 479
StyI CCWWGG 1 cut(s) 435
TaaI ACNGT 2 cut(s) 142, 154
TaiI ACGT 2 cut(s) 513, 646
TaqI TCGA 2 cut(s) 213, 580
TasI AATT 2 cut(s) 189, 489
TauI GCSGC 1 cut(s) 117
TfiI GAWTC 4 cut(s) 4, 482, 524, 662
Tru1I TTAA 4 cut(s) 192, 375, 605, 617
Tru9I TTAA 4 cut(s) 192, 375, 605, 617
TscAI CASTG 1 cut(s) 630
TseFI GTSAC 2 cut(s) 621, 639
TseI GCWGC 2 cut(s) 221, 475
Tsp45I GTSAC 2 cut(s) 621, 639
TspDTI ATGAA 3 cut(s) 7, 503, 654
TspRI CASTG 1 cut(s) 630
VpaK11BI GGWCC 4 cut(s) 66, 122, 247, 628
XmiI GTMKAC 1 cut(s) 349
XmnI GAANNNNTTC 1 cut(s) 561
XspI CTAG 3 cut(s) 174, 411, 479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.