RLG00000031045

B-cell receptor-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0003828
Physical Location & Seq
Reverse (-)
1558930 .. 1560463
1534 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031045

Sequence Viewer

Length: 630 bp
ATGGCTCTGATTCTGGCGTGTTTGTTCAAGACCCCATTGAGGAAGCTTGTGATAATGGGCCTGGATCAGATCAAGCGAGGACGTGGGCCTGTGGTGGTGAAGACGGTGGCGGGAACGGTGTTTGTGGTGTTGTTGACCAGCCTCTACGGTGTGATGACGATCAAGAAGAGTGGGATGACTGGAACCGATGCGGTAGGGATTCTTAGTCCCACGGATCAGATCCTCATGTTCAAGCACCTCCTTGAAGTCACTCTAATGGGGTTCTTCTTATTCCTTGTCCTTATGATAGACAGAATACACCACTACATTAGAGAGCTTCGTGTACGAAGAAAGACCATGGAGGCCATAAAGAAACAGAGCCGAGGATCTGAGGATGGGAAAGCTGGTGGTTTGGACGAGATCAAGGCCTTGGAGAATGAGATGAATACATCGCGCTCAAGACTCAAACAACTAGAATCTGACATTGAGACAAAGATGAAAGAAGCTCAGGCTGCAGAAGCCAATGTTGTTACTCTAAGGAAACAATCTGAAGGCTTCCTTCTCGAGTATGATCGTTTAGTTGAAGAAAACCAAAATTTAAAGAACCAATTGCAGTCGTTGGCACATTCAGGTAGCAAGAAAGATTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000139 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0005795 GO:0005811 GO:0005886 GO:0005887 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0007154 GO:0007165 GO:0007204 GO:0007276 GO:0007283 GO:0008104 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009967 GO:0009987 GO:0010604 GO:0010646 GO:0010647 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012505 GO:0016020 GO:0016021 GO:0016192 GO:0019222 GO:0019722 GO:0019725 GO:0019932 GO:0019953 GO:0022414 GO:0023051 GO:0023052 GO:0023056 GO:0030003 GO:0030135 GO:0030136 GO:0030162 GO:0031090 GO:0031224 GO:0031226 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031410 GO:0031982 GO:0031984 GO:0031985 GO:0032268 GO:0032270 GO:0032386 GO:0032388 GO:0032434 GO:0032436 GO:0032469 GO:0032471 GO:0032501 GO:0032504 GO:0032580 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033365 GO:0034613 GO:0035556 GO:0035584 GO:0042175 GO:0042176 GO:0042287 GO:0042288 GO:0042592 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043280 GO:0043281 GO:0044093 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0044703 GO:0044877 GO:0045732 GO:0045862 GO:0046907 GO:0048193 GO:0048232 GO:0048471 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048609 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051049 GO:0051050 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051246 GO:0051247 GO:0051336 GO:0051345 GO:0051480 GO:0051560 GO:0051561 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0052547 GO:0052548 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0060255 GO:0060341 GO:0061136 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070727 GO:0070861 GO:0070863 GO:0070972 GO:0070973 GO:0071944 GO:0072503 GO:0072507 GO:0080090 GO:0080134 GO:0080135 GO:0090087 GO:0090316 GO:0097038 GO:0097708 GO:0098588 GO:0098771 GO:0098791 GO:0098827 GO:1901800 GO:1902531 GO:1902533 GO:1903050 GO:1903052 GO:1903069 GO:1903071 GO:1903362 GO:1903364 GO:1903827 GO:1903829 GO:1904152 GO:1904154 GO:1904292 GO:1904294 GO:1904951 GO:1905897 GO:1905898 GO:2000058 GO:2000060 GO:2000116 GO:2001056 GO:2001233 GO:2001235 GO:2001242 GO:2001244
KEGG Pathways
Metabolic & Signaling
ko04141 ko05165 map04141 map05165
Pfam Domains
Protein Families
Bap31

Protein Analysis

210

Amino Acids

23.45

Weight (kDa)

9.59

Isoelectric Point (pI)

45.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 433
AciI CCGC 2 cut(s) 110, 191
AclWI GGATC 4 cut(s) 72, 214, 222, 373
AcsI RAATTY 1 cut(s) 574
AcuI CTGAAG 1 cut(s) 549
AfaI GTAC 1 cut(s) 324
AfiI CCNNNNNNNGG 1 cut(s) 39
AgsI TTSAA 4 cut(s) 28, 232, 245, 563
AjiI CACGTC 1 cut(s) 83
AjnI CCWGG 1 cut(s) 60
AluBI AGCT 4 cut(s) 46, 316, 383, 485
AluI AGCT 4 cut(s) 46, 316, 383, 485
Alw26I GTCTC 1 cut(s) 461
AlwI GGATC 4 cut(s) 72, 214, 222, 373
Ama87I CYCGRG 1 cut(s) 542
AoxI GGCC 4 cut(s) 58, 86, 342, 405
ApeKI GCWGC 1 cut(s) 491
ApoI RAATTY 1 cut(s) 574
AspLEI GCGC 1 cut(s) 435
AspS9I GGNCC 2 cut(s) 58, 86
AsuHPI GGTGA 1 cut(s) 109
AvaI CYCGRG 1 cut(s) 542
BbsI GAAGAC 1 cut(s) 107
BbvI GCAGC 1 cut(s) 478
BccI CCATC 1 cut(s) 368
BciT130I CCWGG 1 cut(s) 62
BcoDI GTCTC 1 cut(s) 461
BfaI CTAG 1 cut(s) 452
BfmI CTRYAG 1 cut(s) 492
BisI GCNGC 1 cut(s) 492
BlsI GCNGC 1 cut(s) 493
Bme1390I CCNGG 1 cut(s) 62
BmeT110I CYCGRG 1 cut(s) 542
BmgBI CACGTC 1 cut(s) 83
BmgT120I GGNCC 2 cut(s) 58, 86
BmiI GGNNCC 1 cut(s) 184
BmrFI CCNGG 1 cut(s) 62
BmsI GCATC 1 cut(s) 178
BpiI GAAGAC 1 cut(s) 107
Bpu10I CCTNAGC 1 cut(s) 486
BpuEI CTTGAG 1 cut(s) 421
BsaBI GATNNNNATC 1 cut(s) 158
BsaJI CCNNGG 4 cut(s) 210, 336, 361, 408
Bsc4I CCNNNNNNNGG 1 cut(s) 39
Bse1I ACTGG 1 cut(s) 184
Bse8I GATNNNNATC 1 cut(s) 158
BseBI CCWGG 1 cut(s) 62
BseDI CCNNGG 4 cut(s) 210, 336, 361, 408
BseGI GGATG 2 cut(s) 180, 379
BseJI GATNNNNATC 1 cut(s) 158
BseLI CCNNNNNNNGG 1 cut(s) 39
BseMII CTCAG 2 cut(s) 360, 500
BseNI ACTGG 1 cut(s) 184
BseXI GCAGC 1 cut(s) 478
Bsh1236I CGCG 1 cut(s) 433
BshFI GGCC 4 cut(s) 60, 88, 344, 407
BsiHKCI CYCGRG 1 cut(s) 542
BslFI GGGAC 1 cut(s) 192
BslI CCNNNNNNNGG 1 cut(s) 39
BsmAI GTCTC 1 cut(s) 461
BsmFI GGGAC 1 cut(s) 192
BsnI GGCC 4 cut(s) 60, 88, 344, 407
BsoBI CYCGRG 1 cut(s) 542
Bsp143I GATC 8 cut(s) 64, 69, 159, 214, 219, 365, 399, 550
Bsp19I CCATGG 1 cut(s) 336
BspACI CCGC 2 cut(s) 110, 191
BspANI GGCC 4 cut(s) 60, 88, 344, 407
BspCNI CTCAG 2 cut(s) 361, 499
BspFNI CGCG 1 cut(s) 433
BspLI GGNNCC 1 cut(s) 184
BspMAI CTGCAG 1 cut(s) 496
BspPI GGATC 4 cut(s) 72, 214, 222, 373
BsrI ACTGG 1 cut(s) 184
BssECI CCNNGG 4 cut(s) 210, 336, 361, 408
BssMI GATC 8 cut(s) 64, 69, 159, 214, 219, 365, 399, 550
BssT1I CCWWGG 2 cut(s) 336, 408
Bst2UI CCWGG 1 cut(s) 62
Bst4CI ACNGT 3 cut(s) 106, 118, 149
Bst6I CTCTTC 1 cut(s) 161
BstDEI CTNAG 4 cut(s) 203, 369, 486, 515
BstDSI CCRYGG 2 cut(s) 210, 336
BstF5I GGATG 2 cut(s) 180, 379
BstFNI CGCG 1 cut(s) 433
BstHHI GCGC 1 cut(s) 435
BstKTI GATC 8 cut(s) 67, 72, 162, 217, 222, 368, 402, 553
BstMAI GTCTC 1 cut(s) 461
BstMBI GATC 8 cut(s) 64, 69, 159, 214, 219, 365, 399, 550
BstMWI GCNNNNNNNGC 2 cut(s) 491, 497
BstNI CCWGG 1 cut(s) 62
BstSCI CCNGG 1 cut(s) 60
BstSFI CTRYAG 1 cut(s) 492
BstUI CGCG 1 cut(s) 433
BstV1I GCAGC 1 cut(s) 478
BstV2I GAAGAC 1 cut(s) 107
BstX2I RGATCY 2 cut(s) 219, 365
BstYI RGATCY 2 cut(s) 219, 365
BsuRI GGCC 4 cut(s) 60, 88, 344, 407
BtgI CCRYGG 2 cut(s) 210, 336
BtgZI GCGATG 1 cut(s) 414
BtrI CACGTC 1 cut(s) 83
BtsCI GGATG 2 cut(s) 180, 379
CfoI GCGC 1 cut(s) 435
Cfr13I GGNCC 2 cut(s) 58, 86
Csp6I GTAC 1 cut(s) 323
CspCI CAANNNNNGTGG 2 cut(s) 151, 186
CviAII CATG 2 cut(s) 226, 337
CviQI GTAC 1 cut(s) 323
DdeI CTNAG 4 cut(s) 203, 369, 486, 515
DpnI GATC 8 cut(s) 66, 71, 161, 216, 221, 367, 401, 552
DpnII GATC 8 cut(s) 64, 69, 159, 214, 219, 365, 399, 550
DraI TTTAAA 1 cut(s) 579
Eam1104I CTCTTC 1 cut(s) 161
EarI CTCTTC 1 cut(s) 161
Eco130I CCWWGG 2 cut(s) 336, 408
Eco147I AGGCCT 1 cut(s) 407
Eco57I CTGAAG 1 cut(s) 549
Eco88I CYCGRG 1 cut(s) 542
EcoRII CCWGG 1 cut(s) 60
EcoT14I CCWWGG 2 cut(s) 336, 408
ErhI CCWWGG 2 cut(s) 336, 408
FaeI CATG 2 cut(s) 229, 340
FaiI YATR 6 cut(s) 227, 284, 338, 347, 549, 628
FalI AAGNNNNNCTT 2 cut(s) 522, 554
FaqI GGGAC 1 cut(s) 192
FatI CATG 2 cut(s) 225, 336
FauI CCCGC 1 cut(s) 103
Fnu4HI GCNGC 1 cut(s) 492
FokI GGATG 2 cut(s) 187, 386
Fsp4HI GCNGC 1 cut(s) 492
FspBI CTAG 1 cut(s) 452
GlaI GCGC 1 cut(s) 434
GluI GCNGC 1 cut(s) 492
HaeIII GGCC 4 cut(s) 60, 88, 344, 407
HhaI GCGC 1 cut(s) 435
Hin1II CATG 2 cut(s) 229, 340
Hin6I GCGC 1 cut(s) 433
HinP1I GCGC 1 cut(s) 433
HincII GTYRAC 1 cut(s) 135
HindII GTYRAC 1 cut(s) 135
HindIII AAGCTT 1 cut(s) 44
HinfI GANTC 5 cut(s) 10, 199, 441, 455, 623
HphI GGTGA 1 cut(s) 109
Hpy166II GTNNAC 2 cut(s) 135, 323
Hpy188I TCNGA 6 cut(s) 9, 69, 219, 370, 460, 529
Hpy188III TCNNGA 4 cut(s) 28, 163, 438, 542
Hpy8I GTNNAC 2 cut(s) 135, 323
HpyAV CCTTC 2 cut(s) 524, 548
HpyCH4III ACNGT 3 cut(s) 106, 118, 149
HpyCH4IV ACGT 1 cut(s) 82
HpyCH4V TGCA 2 cut(s) 494, 592
HpyF10VI GCNNNNNNNGC 2 cut(s) 491, 497
HpyF3I CTNAG 4 cut(s) 203, 369, 486, 515
HpySE526I ACGT 1 cut(s) 82
Hsp92II CATG 2 cut(s) 229, 340
HspAI GCGC 1 cut(s) 433
Kzo9I GATC 8 cut(s) 64, 69, 159, 214, 219, 365, 399, 550
LpnPI CCDG 8 cut(s) 47, 74, 102, 151, 165, 369, 473, 594
Lsp1109I GCAGC 1 cut(s) 478
LweI GCATC 1 cut(s) 178
MaeI CTAG 1 cut(s) 452
MaeII ACGT 1 cut(s) 82
MaeIII GTNAC 2 cut(s) 247, 508
MalI GATC 8 cut(s) 66, 71, 161, 216, 221, 367, 401, 552
MboI GATC 8 cut(s) 64, 69, 159, 214, 219, 365, 399, 550
MboII GAAGA 5 cut(s) 112, 178, 256, 339, 575
MfeI CAATTG 1 cut(s) 587
MflI RGATCY 2 cut(s) 219, 365
MluCI AATT 2 cut(s) 574, 587
MlyI GAGTC 1 cut(s) 435
MnlI CCTC 8 cut(s) 33, 71, 152, 233, 248, 334, 356, 364
MseI TTAA 1 cut(s) 578
MslI CAYNNNNRTG 1 cut(s) 254
MspR9I CCNGG 1 cut(s) 62
MunI CAATTG 1 cut(s) 587
MvaI CCWGG 1 cut(s) 62
MvnI CGCG 1 cut(s) 433
MwoI GCNNNNNNNGC 2 cut(s) 491, 497
NcoI CCATGG 1 cut(s) 336
NdeII GATC 8 cut(s) 64, 69, 159, 214, 219, 365, 399, 550
NlaIII CATG 2 cut(s) 229, 340
NlaIV GGNNCC 1 cut(s) 184
NmeAIII GCCGAG 1 cut(s) 386
NmuCI GTSAC 1 cut(s) 247
PaeR7I CTCGAG 1 cut(s) 542
PceI AGGCCT 1 cut(s) 407
PfeI GAWTC 4 cut(s) 10, 199, 455, 623
PkrI GCNGC 1 cut(s) 493
PleI GAGTC 1 cut(s) 435
PpsI GAGTC 1 cut(s) 435
Psp6I CCWGG 1 cut(s) 60
PspGI CCWGG 1 cut(s) 60
PspN4I GGNNCC 1 cut(s) 184
PspPI GGNCC 2 cut(s) 58, 86
PstI CTGCAG 1 cut(s) 496
PsuI RGATCY 2 cut(s) 219, 365
RsaI GTAC 1 cut(s) 324
RsaNI GTAC 1 cut(s) 323
RseI CAYNNNNRTG 1 cut(s) 254
SaqAI TTAA 1 cut(s) 578
SatI GCNGC 1 cut(s) 492
Sau3AI GATC 8 cut(s) 64, 69, 159, 214, 219, 365, 399, 550
Sau96I GGNCC 2 cut(s) 58, 86
SchI GAGTC 1 cut(s) 435
ScrFI CCNGG 1 cut(s) 62
SetI ASST 7 cut(s) 48, 85, 240, 318, 385, 487, 613
SfaNI GCATC 1 cut(s) 178
SfcI CTRYAG 1 cut(s) 492
Sfr274I CTCGAG 1 cut(s) 542
SlaI CTCGAG 1 cut(s) 542
SmiMI CAYNNNNRTG 1 cut(s) 254
SmlI CTYRAG 2 cut(s) 436, 542
SmoI CTYRAG 2 cut(s) 436, 542
Sse9I AATT 2 cut(s) 574, 587
SseBI AGGCCT 1 cut(s) 407
SsiI CCGC 2 cut(s) 110, 191
SspMI CTAG 1 cut(s) 452
StuI AGGCCT 1 cut(s) 407
StyD4I CCNGG 1 cut(s) 60
StyI CCWWGG 2 cut(s) 336, 408
TaaI ACNGT 3 cut(s) 106, 118, 149
TaiI ACGT 1 cut(s) 85
TaqI TCGA 1 cut(s) 543
TasI AATT 2 cut(s) 574, 587
TfiI GAWTC 4 cut(s) 10, 199, 455, 623
Tru1I TTAA 1 cut(s) 578
Tru9I TTAA 1 cut(s) 578
TseFI GTSAC 1 cut(s) 247
TseI GCWGC 1 cut(s) 491
Tsp45I GTSAC 1 cut(s) 247
TspDTI ATGAA 3 cut(s) 437, 491, 615
TspGWI ACGGA 1 cut(s) 227
XapI RAATTY 1 cut(s) 574
XhoI CTCGAG 1 cut(s) 542
XspI CTAG 1 cut(s) 452
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.