Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0007660

Physical Location & Seq

Genomic Coordinates Reverse (-)

1914947 .. 1915966

Gene Structure 1020 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G040700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGAAGGAAGAAGAAAGCCTCCTCTCCACCCAAACCCAATCGGGCCAACCCGAAACCCAAACCCAAACCCAACTTCTGCACTACTGGGGCAACACCCCAGAGCAAGAATACTACAATCTCCAAGGCATCAAAGCCTCCAAATCCTTCTACACCTCACCCAGAGGCCTCAAGCTCTTCACCCGGCAATGGCTGCCCCTCCTCTCCCCTCCACGTGGCCTCATCTTCATGGTCCACGGCTACGGCAACGACATCAGCTGGACCTTCCAAGCCACCCCAATTTTCCTCGCCCAACAGGGTTTCGCCTGCTTCGCTCTCGACCTCGAAGGCCACGGCCAATCCCACGGCCTCAGGGCCTTCGTCCCCGACGTCCATCTCGTGGTCCAAGACTGCCTCGCTTTCTTCACCCTGGTCAAGCAGCAAGAACCCCAATTTCTAAACGTCCCCTGTTTTCTCTACGGCGAGTCCATGGGCGGCGCCATTTGCCTTCTGATCCACTTCGCGGAGCCGGAAGCTTTTCAAGGTGCGATTTTGGTGGCACCCATGTGTAAAATTTCTGATAAGGTGAAACCCAGGTGGCCAATTCCTCAAATTCTGACGTTCGTGGCCAGATTCTTTCCCAGCTTGGCCATTGTGCCCACCGCGGACCTCATGTACAAGTCTGTGAAGGTGGAGGAGAAGAAGATCATAGCGAATATGAATCCGATGAGGTACAGAGGAAAGCCGAGATTGGGGACGGTAGTGGAGTTGCTCAAAGTGACTGAGTATGTGAGTCAGAGATTGGGCGATGTAAGTCTTCCGTTCATTGTGTTGCATGGAAGCGCAGATGTTGTGACTGATCCGAATGTGAGCAGAGCATTGTATGAAGAGGCCAAGAGTGAGGATAAGACGATCAAGATTTATGAAGGGATGATGCATTCCTTGCTGTTTGGGGAGACTGATCAAAATGTTGATATTGTTCGCGCTGATATTCTTTCTTGGTTGAATCATAGATGCCATGCCAGAGGAGGAGGAGCTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 ko04714 ko04723 ko04923 map00561 map01100 map04714 map04723 map04923

Pfam Domains

Protein Families

Hydrolase_4

Protein Analysis

340

Amino Acids

38.14

Weight (kDa)

6.37

Isoelectric Point (pI)

35.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007660)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11090
fragaria_vesca	FvH4_3g04590
malus_domestica	MD10G1300100.v1.1
prunus_persica	Prupe.4G040700_v2.0.a1
pyrus_communis	pycom10g25280
rosa_chinensis	RchiOBHm_Chr1g0341431 RchiOBHm_Chr2g0096241 RchiOBHm_Chr2g0170991 RchiOBHm_Chr5g0007531 RchiOBHm_Chr5g0049361
rosa_laevigata	RLG00000013401 RLG00000031465
rosa_multiflora	Rmu_co8522595.1_g000002 Rmu_sc0009463.1_g000005 Rmu_sc0009463.1_g000007 Rmu_ssc0000182.1_g000012
rosa_roxburghii	Rroxscaffold_1G00067270 Rroxscaffold_2G00139780
rosa_rugosa	Rorug04G0428100.1
rosa_samantha	Rh4CG004300 Rh5BG053500 Rh5CG063300 Rh5DG052500
rosa_wichuraiana	Rw5G005430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	369
AccB1I	GGYRCC	2 cut(s)	473, 535
AccB7I	CCANNNNNTGG	1 cut(s)	376
AccII	CGCG	3 cut(s)	500, 641, 960
AciI	CCGC	4 cut(s)	471, 500, 639, 641
AclWI	GGATC	2 cut(s)	484, 830
AcoI	YGGCCR	4 cut(s)	331, 575, 603, 624
AcsI	RAATTY	2 cut(s)	549, 588
AcvI	CACGTG	1 cut(s)	212
AcyI	GRCGYC	2 cut(s)	366, 474
AfaI	GTAC	2 cut(s)	653, 710
AfiI	CCNNNNNNNGG	5 cut(s)	186, 212, 376, 499, 728
AgsI	TTSAA	2 cut(s)	518, 982
AjnI	CCWGG	2 cut(s)	405, 569
AjuI	GAANNNNNNNTTGG	2 cut(s)	57, 89
AleI	CACNNNNGTG	1 cut(s)	541
AluBI	AGCT	5 cut(s)	172, 255, 512, 621, 1013
AluI	AGCT	5 cut(s)	172, 255, 512, 621, 1013
Alw26I	GTCTC	1 cut(s)	926
AlwI	GGATC	2 cut(s)	484, 830
ApeKI	GCWGC	2 cut(s)	190, 415
ApoI	RAATTY	2 cut(s)	549, 588
Asp700I	GAANNNNTTC	1 cut(s)	513
AspLEI	GCGC	3 cut(s)	476, 821, 962
AspS9I	GGNCC	6 cut(s)	43, 229, 258, 351, 379, 643
AsuC2I	CCSGG	1 cut(s)	181
AsuHPI	GGTGA	4 cut(s)	147, 169, 394, 574
AvaII	GGWCC	4 cut(s)	229, 258, 379, 643
AxyI	CCTNAGG	1 cut(s)	347
BaeGI	GKGCMC	1 cut(s)	636
BalI	TGGCCA	3 cut(s)	577, 605, 626
BanI	GGYRCC	2 cut(s)	473, 535
BauI	CACGAG	1 cut(s)	374
BbrPI	CACGTG	1 cut(s)	212
BbsI	GAAGAC	1 cut(s)	785
BbvI	GCAGC	2 cut(s)	177, 427
BccI	CCATC	1 cut(s)	378
BceAI	ACGGC	5 cut(s)	250, 256, 346, 358, 472
BciT130I	CCWGG	2 cut(s)	407, 571
BclI	TGATCA	1 cut(s)	937
BcnI	CCSGG	1 cut(s)	181
BcoDI	GTCTC	1 cut(s)	926
BfoI	RGCGCY	1 cut(s)	477
BisI	GCNGC	3 cut(s)	191, 416, 472
BlsI	GCNGC	3 cut(s)	192, 417, 473
Bme1390I	CCNGG	3 cut(s)	181, 407, 571
Bme18I	GGWCC	4 cut(s)	229, 258, 379, 643
BmgT120I	GGNCC	6 cut(s)	43, 229, 258, 351, 379, 643
BmiI	GGNNCC	3 cut(s)	475, 504, 537
BmrFI	CCNGG	3 cut(s)	181, 407, 571
BmrI	ACTGGG	1 cut(s)	94
BmsI	GCATC	3 cut(s)	135, 900, 980
BmuI	ACTGGG	1 cut(s)	94
BpiI	GAAGAC	1 cut(s)	785
BpuEI	CTTGAG	1 cut(s)	152
BpuMI	CCSGG	1 cut(s)	181
BsaAI	YACGTR	1 cut(s)	212
BsaHI	GRCGYC	2 cut(s)	366, 474
BsaJI	CCNNGG	8 cut(s)	121, 232, 328, 340, 405, 465, 569, 639
Bsc4I	CCNNNNNNNGG	5 cut(s)	186, 212, 376, 499, 728
Bse1I	ACTGG	1 cut(s)	89
Bse21I	CCTNAGG	1 cut(s)	347
Bse3DI	GCAATG	1 cut(s)	191
BseBI	CCWGG	2 cut(s)	407, 571
BseDI	CCNNGG	8 cut(s)	121, 232, 328, 340, 405, 465, 569, 639
BseGI	GGATG	1 cut(s)	912
BseLI	CCNNNNNNNGG	5 cut(s)	186, 212, 376, 499, 728
BseMI	GCAATG	1 cut(s)	191
BseMII	CTCAG	2 cut(s)	361, 750
BseNI	ACTGG	1 cut(s)	89
BseRI	GAGGAG	5 cut(s)	11, 188, 686, 1017, 1020
BseSI	GKGCMC	1 cut(s)	636
BseXI	GCAGC	2 cut(s)	177, 427
BseYI	CCCAGC	1 cut(s)	617
BsgI	GTGCAG	1 cut(s)	62
Bsh1236I	CGCG	3 cut(s)	500, 641, 960
BshNI	GGYRCC	2 cut(s)	473, 535
BsiSI	CCGG	2 cut(s)	181, 506
BslFI	GGGAC	3 cut(s)	344, 425, 745
BslI	CCNNNNNNNGG	5 cut(s)	186, 212, 376, 499, 728
BsmAI	GTCTC	1 cut(s)	926
BsmFI	GGGAC	3 cut(s)	344, 425, 745
BsmI	GAATGC	1 cut(s)	913
Bsp1286I	GDGCHC	1 cut(s)	636
Bsp1407I	TGTACA	1 cut(s)	651
Bsp143I	GATC	5 cut(s)	489, 681, 835, 888, 937
Bsp19I	CCATGG	1 cut(s)	465
BspACI	CCGC	4 cut(s)	471, 500, 639, 641
BspCNI	CTCAG	2 cut(s)	360, 751
BspFNI	CGCG	3 cut(s)	500, 641, 960
BspLI	GGNNCC	3 cut(s)	475, 504, 537
BspPI	GGATC	2 cut(s)	484, 830
BspQI	GCTCTTC	1 cut(s)	179
BspT107I	GGYRCC	2 cut(s)	473, 535
BsrDI	GCAATG	1 cut(s)	191
BsrGI	TGTACA	1 cut(s)	651
BsrI	ACTGG	1 cut(s)	89
BssECI	CCNNGG	8 cut(s)	121, 232, 328, 340, 405, 465, 569, 639
BssMI	GATC	5 cut(s)	489, 681, 835, 888, 937
BssNI	GRCGYC	2 cut(s)	366, 474
BssSI	CACGAG	1 cut(s)	374
BssT1I	CCWWGG	2 cut(s)	121, 465
Bst2BI	CACGAG	1 cut(s)	374
Bst2UI	CCWGG	2 cut(s)	407, 571
Bst4CI	ACNGT	1 cut(s)	736
Bst6I	CTCTTC	2 cut(s)	179, 858
BstACI	GRCGYC	2 cut(s)	366, 474
BstAPI	GCANNNNNTGC	2 cut(s)	190, 919
BstAUI	TGTACA	1 cut(s)	651
BstBAI	YACGTR	1 cut(s)	212
BstC8I	GCNNGC	1 cut(s)	304
BstDEI	CTNAG	2 cut(s)	347, 759
BstDSI	CCRYGG	5 cut(s)	232, 328, 340, 465, 639
BstF5I	GGATG	1 cut(s)	912
BstFNI	CGCG	3 cut(s)	500, 641, 960
BstH2I	RGCGCY	1 cut(s)	477
BstHHI	GCGC	3 cut(s)	476, 821, 962
BstKTI	GATC	5 cut(s)	492, 684, 838, 891, 940
BstMAI	GTCTC	1 cut(s)	926
BstMBI	GATC	5 cut(s)	489, 681, 835, 888, 937
BstMWI	GCNNNNNNNGC	4 cut(s)	190, 308, 480, 919
BstNI	CCWGG	2 cut(s)	407, 571
BstSCI	CCNGG	3 cut(s)	179, 405, 569
BstSLI	GKGCMC	1 cut(s)	636
BstUI	CGCG	3 cut(s)	500, 641, 960
BstV1I	GCAGC	2 cut(s)	177, 427
BstV2I	GAAGAC	1 cut(s)	785
Bsu36I	CCTNAGG	1 cut(s)	347
BtgI	CCRYGG	5 cut(s)	232, 328, 340, 465, 639
BtgZI	GCGATG	1 cut(s)	798
BtsCI	GGATG	1 cut(s)	912
Cac8I	GCNNGC	1 cut(s)	304
CfoI	GCGC	3 cut(s)	476, 821, 962
Cfr13I	GGNCC	6 cut(s)	43, 229, 258, 351, 379, 643
Cfr42I	CCGCGG	1 cut(s)	642
Csp6I	GTAC	2 cut(s)	652, 709
CviAII	CATG	6 cut(s)	226, 466, 541, 649, 812, 995
CviQI	GTAC	2 cut(s)	652, 709
DdeI	CTNAG	2 cut(s)	347, 759
DinI	GGCGCC	1 cut(s)	475
DpnI	GATC	5 cut(s)	491, 683, 837, 890, 939
DpnII	GATC	5 cut(s)	489, 681, 835, 888, 937
EaeI	YGGCCR	4 cut(s)	331, 575, 603, 624
Eam1104I	CTCTTC	2 cut(s)	179, 858
EarI	CTCTTC	2 cut(s)	179, 858
Eco130I	CCWWGG	2 cut(s)	121, 465
Eco147I	AGGCCT	1 cut(s)	165
Eco47I	GGWCC	4 cut(s)	229, 258, 379, 643
Eco72I	CACGTG	1 cut(s)	212
Eco81I	CCTNAGG	1 cut(s)	347
EcoO109I	RGGNCCY	1 cut(s)	351
EcoRII	CCWGG	2 cut(s)	405, 569
EcoT14I	CCWWGG	2 cut(s)	121, 465
EcoT22I	ATGCAT	1 cut(s)	915
EgeI	GGCGCC	1 cut(s)	475
EheI	GGCGCC	1 cut(s)	475
ErhI	CCWWGG	2 cut(s)	121, 465
FaeI	CATG	6 cut(s)	229, 469, 544, 652, 815, 998
FaqI	GGGAC	3 cut(s)	344, 425, 745
FatI	CATG	6 cut(s)	225, 465, 540, 648, 811, 994
FbaI	TGATCA	1 cut(s)	937
Fnu4HI	GCNGC	3 cut(s)	191, 416, 472
FokI	GGATG	1 cut(s)	919
Fsp4HI	GCNGC	3 cut(s)	191, 416, 472
GlaI	GCGC	3 cut(s)	475, 820, 961
GluI	GCNGC	3 cut(s)	191, 416, 472
GsaI	CCCAGC	1 cut(s)	621
HaeII	RGCGCY	1 cut(s)	477
HapII	CCGG	2 cut(s)	181, 506
HhaI	GCGC	3 cut(s)	476, 821, 962
Hin1I	GRCGYC	2 cut(s)	366, 474
Hin1II	CATG	6 cut(s)	229, 469, 544, 652, 815, 998
Hin6I	GCGC	3 cut(s)	474, 819, 960
HinP1I	GCGC	3 cut(s)	474, 819, 960
HindIII	AAGCTT	1 cut(s)	510
HinfI	GANTC	5 cut(s)	461, 609, 697, 769, 982
HpaII	CCGG	2 cut(s)	181, 506
HphI	GGTGA	4 cut(s)	147, 169, 394, 574
Hpy166II	GTNNAC	1 cut(s)	232
Hpy188I	TCNGA	6 cut(s)	489, 556, 594, 702, 774, 840
Hpy188III	TCNNGA	2 cut(s)	314, 892
Hpy8I	GTNNAC	1 cut(s)	232
Hpy99I	CGWCG	1 cut(s)	368
HpyAV	CCTTC	7 cut(s)	154, 271, 317, 364, 494, 658, 896
HpyCH4III	ACNGT	1 cut(s)	736
HpyCH4IV	ACGT	4 cut(s)	211, 366, 438, 596
HpyCH4V	TGCA	3 cut(s)	79, 811, 913
HpyF10VI	GCNNNNNNNGC	4 cut(s)	190, 308, 480, 919
HpyF3I	CTNAG	2 cut(s)	347, 759
HpySE526I	ACGT	4 cut(s)	211, 366, 438, 596
Hsp92I	GRCGYC	2 cut(s)	366, 474
Hsp92II	CATG	6 cut(s)	229, 469, 544, 652, 815, 998
HspAI	GCGC	3 cut(s)	474, 819, 960
KasI	GGCGCC	1 cut(s)	473
Ksp22I	TGATCA	1 cut(s)	937
KspI	CCGCGG	1 cut(s)	642
Kzo9I	GATC	5 cut(s)	489, 681, 835, 888, 937
LguI	GCTCTTC	1 cut(s)	179
LmnI	GCTCC	2 cut(s)	502, 1010
Lsp1109I	GCAGC	2 cut(s)	177, 427
LweI	GCATC	3 cut(s)	135, 900, 980
MaeII	ACGT	4 cut(s)	211, 366, 438, 596
MaeIII	GTNAC	2 cut(s)	754, 829
MalI	GATC	5 cut(s)	491, 683, 837, 890, 939
MboI	GATC	5 cut(s)	489, 681, 835, 888, 937
MboII	GAAGA	9 cut(s)	20, 23, 166, 214, 391, 688, 691, 785, 875
MhlI	GDGCHC	1 cut(s)	636
MlsI	TGGCCA	3 cut(s)	577, 605, 626
MluCI	AATT	5 cut(s)	276, 428, 549, 579, 588
MluNI	TGGCCA	3 cut(s)	577, 605, 626
Mly113I	GGCGCC	1 cut(s)	474
MlyI	GAGTC	2 cut(s)	470, 778
Mox20I	TGGCCA	3 cut(s)	577, 605, 626
Mph1103I	ATGCAT	1 cut(s)	915
MroXI	GAANNNNTTC	1 cut(s)	513
MscI	TGGCCA	3 cut(s)	577, 605, 626
MslI	CAYNNNNRTG	2 cut(s)	224, 541
Msp20I	TGGCCA	3 cut(s)	577, 605, 626
MspA1I	CMGCKG	2 cut(s)	255, 641
MspI	CCGG	2 cut(s)	181, 506
MspR9I	CCNGG	3 cut(s)	181, 407, 571
Mva1269I	GAATGC	1 cut(s)	913
MvaI	CCWGG	2 cut(s)	407, 571
MvnI	CGCG	3 cut(s)	500, 641, 960
MwoI	GCNNNNNNNGC	4 cut(s)	190, 308, 480, 919
NarI	GGCGCC	1 cut(s)	474
NciI	CCSGG	1 cut(s)	181
NcoI	CCATGG	1 cut(s)	465
NdeII	GATC	5 cut(s)	489, 681, 835, 888, 937
NlaIII	CATG	6 cut(s)	229, 469, 544, 652, 815, 998
NlaIV	GGNNCC	3 cut(s)	475, 504, 537
NmeAIII	GCCGAG	1 cut(s)	747
NmuCI	GTSAC	2 cut(s)	754, 829
NsiI	ATGCAT	1 cut(s)	915
OliI	CACNNNNGTG	1 cut(s)	541
PceI	AGGCCT	1 cut(s)	165
PciSI	GCTCTTC	1 cut(s)	179
PcsI	WCGNNNNNNNCGW	2 cut(s)	363, 372
PctI	GAATGC	1 cut(s)	913
PdmI	GAANNNNTTC	1 cut(s)	513
PfeI	GAWTC	3 cut(s)	609, 697, 982
PflMI	CCANNNNNTGG	1 cut(s)	376
PkrI	GCNGC	3 cut(s)	192, 417, 473
PleI	GAGTC	2 cut(s)	469, 777
PluTI	GGCGCC	1 cut(s)	477
PmaCI	CACGTG	1 cut(s)	212
PmlI	CACGTG	1 cut(s)	212
PpsI	GAGTC	2 cut(s)	469, 777
Ppu21I	YACGTR	1 cut(s)	212
Psp6I	CCWGG	2 cut(s)	405, 569
PspCI	CACGTG	1 cut(s)	212
PspFI	CCCAGC	1 cut(s)	617
PspGI	CCWGG	2 cut(s)	405, 569
PspN4I	GGNNCC	3 cut(s)	475, 504, 537
PspPI	GGNCC	6 cut(s)	43, 229, 258, 351, 379, 643
PvuII	CAGCTG	1 cut(s)	255
RsaI	GTAC	2 cut(s)	653, 710
RsaNI	GTAC	2 cut(s)	652, 709
RseI	CAYNNNNRTG	2 cut(s)	224, 541
SacII	CCGCGG	1 cut(s)	642
SapI	GCTCTTC	1 cut(s)	179
SatI	GCNGC	3 cut(s)	191, 416, 472
Sau3AI	GATC	5 cut(s)	489, 681, 835, 888, 937
Sau96I	GGNCC	6 cut(s)	43, 229, 258, 351, 379, 643
SchI	GAGTC	2 cut(s)	470, 778
ScrFI	CCNGG	3 cut(s)	181, 407, 571
SduI	GDGCHC	1 cut(s)	636
SfaNI	GCATC	3 cut(s)	135, 900, 980
SfoI	GGCGCC	1 cut(s)	475
Sfr303I	CCGCGG	1 cut(s)	642
SgrBI	CCGCGG	1 cut(s)	642
SinI	GGWCC	4 cut(s)	229, 258, 379, 643
SmiMI	CAYNNNNRTG	2 cut(s)	224, 541
SmlI	CTYRAG	1 cut(s)	167
SmoI	CTYRAG	1 cut(s)	167
Sse9I	AATT	5 cut(s)	276, 428, 549, 579, 588
SseBI	AGGCCT	1 cut(s)	165
SsiI	CCGC	4 cut(s)	471, 500, 639, 641
SspDI	GGCGCC	1 cut(s)	473
StuI	AGGCCT	1 cut(s)	165
StyD4I	CCNGG	3 cut(s)	179, 405, 569
StyI	CCWWGG	2 cut(s)	121, 465
TaaI	ACNGT	1 cut(s)	736
TaiI	ACGT	4 cut(s)	214, 369, 441, 599
TaqI	TCGA	2 cut(s)	315, 321
TasI	AATT	5 cut(s)	276, 428, 549, 579, 588
TatI	WGTACW	1 cut(s)	651
TauI	GCSGC	1 cut(s)	474
TfiI	GAWTC	3 cut(s)	609, 697, 982
TseFI	GTSAC	2 cut(s)	754, 829
TseI	GCWGC	2 cut(s)	190, 415
Tsp45I	GTSAC	2 cut(s)	754, 829
TspDTI	ATGAA	6 cut(s)	17, 214, 710, 790, 876, 915
TspGWI	ACGGA	1 cut(s)	786
Van91I	CCANNNNNTGG	1 cut(s)	376
VpaK11BI	GGWCC	4 cut(s)	229, 258, 379, 643
XapI	RAATTY	2 cut(s)	549, 588
XmnI	GAANNNNTTC	1 cut(s)	513
ZraI	GACGTC	1 cut(s)	367
Zsp2I	ATGCAT	1 cut(s)	915

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.