RLG00000031465

Serine aminopeptidase, S33

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0007660
Physical Location & Seq
Reverse (-)
5428433 .. 5429386
954 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031465

Sequence Viewer

Length: 954 bp
ATGAAGGAGGAGCAACGATGGCCTCACTACTGGGGCACCACACCGGAGCAAGACTACTACGATCAGCAGGGGATCAAATCCTCCAAATCTTACTTCACCTCTCCCAGAGGCCTCAGGCTCTTCACCCGCCAATGGCTTCCCCTCCTCTCTCCTCCACGTGGCCTCATCTTCATGGTCCACGGCTACGGCAACGACATCAGCTGGACTTTTCAGGCCACCGCCATCTTCCTCGCCCAGAACGGCTTCGCCTGCTTCGCTCTCGACCTCGAATCCCACGGCCGCTCCCACGGCCTCCGAGCCTTCGTCCCGAACGTCGATCTCGTCGTCCAAGACTGCCGCTTCTTCTTCAGTTTCGTCAAGCAAAACCCCCAATACGAAACCCTACCGTCCTTCCTCTACGGCGAGTCCATGGGCGGCGCGATCTGTCTTCTGATCCACTTCGCCGATCCCGAAGAAGCCTTCGACGGCGCGATTCTGGTGGCGCCGATGTGCAAAATCGCCGACGCCGTCAAGCCGAAGTGGCCCATCCCTCAGATCCTGACGTTCGTCGCCAAGTTTCTCCCCACATTGGCGGTTGTGCCCACCGGGGACTTGATGGTCAAATCGGTCAAGGTCGAGGACAAAAAGGTAATTGCGGACATGAATCCCTCAAGGTACAGAGGGAGGCCCAGATTGGGTACAGTTCTGGAGCTACTGAGAGTTACAGACTATGTGAGCCGGAGACTCTGTGATGTCAGCCTGCCGTTTCTTGTGCTACACGGCAGCGCCGACGTGGTGACTGATCCTAATGTGAGCAGAGCTTTGTATGAAGAAGCAAAGAGTGAAGACAAGACGATCAAGATTTACGACGGGATGATGCATTCCTTGCTGTTTGGGGAGACTGACGAGAATGTCGACATCGTTCGCGGCGACATTCTGGCTTGGTTGGATCAGAGGTGCAGAGCAAGAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00561 ko01100 ko04714 ko04723 ko04923 map00561 map01100 map04714 map04723 map04923
Pfam Domains
Protein Families
Hydrolase_4

Protein Analysis

318

Amino Acids

35.98

Weight (kDa)

6.39

Isoelectric Point (pI)

38.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 51 - 293 2.6e-56 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 56 - 291 2.5e-11 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 596, 890
AccB1I GGYRCC 2 cut(s) 35, 481
AccBSI CCGCTC 1 cut(s) 282
AccI GTMKAC 1 cut(s) 894
AccII CGCG 3 cut(s) 419, 470, 906
AciI CCGC 8 cut(s) 127, 219, 280, 337, 414, 572, 635, 906
AclWI GGATC 6 cut(s) 80, 427, 440, 529, 776, 936
AcoI YGGCCR 1 cut(s) 277
AcuI CTGAAG 1 cut(s) 331
AcvI CACGTG 1 cut(s) 158
AcyI GRCGYC 2 cut(s) 482, 504
AfaI GTAC 2 cut(s) 656, 679
AfiI CCNNNNNNNGG 4 cut(s) 132, 158, 568, 674
AjiI CACGTC 1 cut(s) 772
AjuI GAANNNNNNNTTGG 2 cut(s) 77, 109
AluBI AGCT 3 cut(s) 201, 691, 800
AluI AGCT 3 cut(s) 201, 691, 800
Alw26I GTCTC 2 cut(s) 715, 872
AlwI GGATC 6 cut(s) 80, 427, 440, 529, 776, 936
AlwNI CAGNNNCTG 1 cut(s) 538
AoxI GGCC 8 cut(s) 20, 109, 160, 213, 277, 289, 521, 665
ApeKI GCWGC 1 cut(s) 762
Asp700I GAANNNNTTC 1 cut(s) 242
AspLEI GCGC 4 cut(s) 419, 470, 484, 767
AspS9I GGNCC 3 cut(s) 175, 522, 666
AsuC2I CCSGG 1 cut(s) 586
AsuHPI GGTGA 3 cut(s) 88, 115, 787
AvaII GGWCC 1 cut(s) 175
AxyI CCTNAGG 1 cut(s) 113
BaeGI GKGCMC 2 cut(s) 38, 582
BanI GGYRCC 2 cut(s) 35, 481
BbrPI CACGTG 1 cut(s) 158
BbsI GAAGAC 2 cut(s) 419, 831
BbvI GCAGC 1 cut(s) 774
BccI CCATC 4 cut(s) 12, 230, 533, 589
BcnI CCSGG 1 cut(s) 586
BcoDI GTCTC 2 cut(s) 715, 872
BfoI RGCGCY 2 cut(s) 485, 768
BglI GCCNNNNNGGC 1 cut(s) 520
BisI GCNGC 5 cut(s) 280, 337, 415, 763, 907
BlsI GCNGC 5 cut(s) 281, 338, 416, 764, 908
Bme1390I CCNGG 1 cut(s) 586
Bme18I GGWCC 1 cut(s) 175
BmgBI CACGTC 1 cut(s) 772
BmgT120I GGNCC 3 cut(s) 175, 522, 666
BmiI GGNNCC 2 cut(s) 37, 483
BmrFI CCNGG 1 cut(s) 586
BmrI ACTGGG 1 cut(s) 40
BmsI GCATC 1 cut(s) 846
BmuI ACTGGG 1 cut(s) 40
BoxI GACNNNNGTC 1 cut(s) 545
BpiI GAAGAC 2 cut(s) 419, 831
BpmI CTGGAG 1 cut(s) 707
BpuEI CTTGAG 1 cut(s) 634
BpuMI CCSGG 1 cut(s) 586
BsaAI YACGTR 1 cut(s) 158
BsaHI GRCGYC 2 cut(s) 482, 504
BsaJI CCNNGG 5 cut(s) 178, 274, 286, 408, 585
BsaWI WCCGGW 1 cut(s) 43
BsaXI ACNNNNNCTCC 4 cut(s) 266, 296, 712, 742
Bsc4I CCNNNNNNNGG 4 cut(s) 132, 158, 568, 674
Bse1I ACTGG 1 cut(s) 35
Bse21I CCTNAGG 1 cut(s) 113
BseDI CCNNGG 5 cut(s) 178, 274, 286, 408, 585
BseGI GGATG 2 cut(s) 525, 858
BseLI CCNNNNNNNGG 4 cut(s) 132, 158, 568, 674
BseMII CTCAG 3 cut(s) 127, 545, 686
BseNI ACTGG 1 cut(s) 35
BseRI GAGGAG 3 cut(s) 23, 134, 141
BseSI GKGCMC 2 cut(s) 38, 582
BseX3I CGGCCG 1 cut(s) 277
BseXI GCAGC 1 cut(s) 774
Bsh1236I CGCG 3 cut(s) 419, 470, 906
Bsh1285I CGRYCG 1 cut(s) 280
BshFI GGCC 8 cut(s) 22, 111, 162, 215, 279, 291, 523, 667
BshNI GGYRCC 2 cut(s) 35, 481
BsiEI CGRYCG 1 cut(s) 280
BsiSI CCGG 3 cut(s) 44, 585, 718
BslFI GGGAC 2 cut(s) 290, 602
BslI CCNNNNNNNGG 4 cut(s) 132, 158, 568, 674
BsmAI GTCTC 2 cut(s) 715, 872
BsmFI GGGAC 2 cut(s) 290, 602
BsmI GAATGC 1 cut(s) 859
BsnI GGCC 8 cut(s) 22, 111, 162, 215, 279, 291, 523, 667
Bsp1286I GDGCHC 2 cut(s) 38, 582
Bsp19I CCATGG 1 cut(s) 408
BspACI CCGC 8 cut(s) 127, 219, 280, 337, 414, 572, 635, 906
BspANI GGCC 8 cut(s) 22, 111, 162, 215, 279, 291, 523, 667
BspCNI CTCAG 3 cut(s) 126, 544, 687
BspFNI CGCG 3 cut(s) 419, 470, 906
BspLI GGNNCC 2 cut(s) 37, 483
BspPI GGATC 6 cut(s) 80, 427, 440, 529, 776, 936
BspQI GCTCTTC 1 cut(s) 125
BspT107I GGYRCC 2 cut(s) 35, 481
BsrBI CCGCTC 1 cut(s) 282
BsrI ACTGG 1 cut(s) 35
BssECI CCNNGG 5 cut(s) 178, 274, 286, 408, 585
BssNI GRCGYC 2 cut(s) 482, 504
BssT1I CCWWGG 1 cut(s) 408
Bst4CI ACNGT 2 cut(s) 387, 682
Bst6I CTCTTC 1 cut(s) 125
BstACI GRCGYC 2 cut(s) 482, 504
BstAPI GCANNNNNTGC 1 cut(s) 865
BstBAI YACGTR 1 cut(s) 158
BstC8I GCNNGC 2 cut(s) 250, 740
BstDEI CTNAG 3 cut(s) 113, 531, 695
BstDSI CCRYGG 4 cut(s) 178, 274, 286, 408
BstF5I GGATG 2 cut(s) 525, 858
BstFNI CGCG 3 cut(s) 419, 470, 906
BstH2I RGCGCY 2 cut(s) 485, 768
BstHHI GCGC 4 cut(s) 419, 470, 484, 767
BstMAI GTCTC 2 cut(s) 715, 872
BstMCI CGRYCG 1 cut(s) 280
BstMWI GCNNNNNNNGC 6 cut(s) 19, 249, 254, 288, 520, 865
BstPAI GACNNNNGTC 1 cut(s) 545
BstSCI CCNGG 1 cut(s) 584
BstSLI GKGCMC 2 cut(s) 38, 582
BstUI CGCG 3 cut(s) 419, 470, 906
BstV1I GCAGC 1 cut(s) 774
BstV2I GAAGAC 2 cut(s) 419, 831
BstX2I RGATCY 1 cut(s) 534
BstYI RGATCY 1 cut(s) 534
BstZI CGGCCG 1 cut(s) 277
Bsu36I CCTNAGG 1 cut(s) 113
BsuRI GGCC 8 cut(s) 22, 111, 162, 215, 279, 291, 523, 667
BtgI CCRYGG 4 cut(s) 178, 274, 286, 408
BtrI CACGTC 1 cut(s) 772
BtsCI GGATG 2 cut(s) 525, 858
Cac8I GCNNGC 2 cut(s) 250, 740
CaiI CAGNNNCTG 1 cut(s) 538
CfoI GCGC 4 cut(s) 419, 470, 484, 767
Cfr13I GGNCC 3 cut(s) 175, 522, 666
CseI GACGC 1 cut(s) 512
Csp6I GTAC 2 cut(s) 655, 678
CviAII CATG 3 cut(s) 172, 409, 640
CviQI GTAC 2 cut(s) 655, 678
DdeI CTNAG 3 cut(s) 113, 531, 695
DinI GGCGCC 1 cut(s) 483
DrdI GACNNNNNNGTC 2 cut(s) 596, 890
DseDI GACNNNNNNGTC 2 cut(s) 596, 890
EaeI YGGCCR 1 cut(s) 277
EagI CGGCCG 1 cut(s) 277
Eam1104I CTCTTC 1 cut(s) 125
EarI CTCTTC 1 cut(s) 125
EclXI CGGCCG 1 cut(s) 277
Eco130I CCWWGG 1 cut(s) 408
Eco147I AGGCCT 1 cut(s) 111
Eco47I GGWCC 1 cut(s) 175
Eco52I CGGCCG 1 cut(s) 277
Eco57I CTGAAG 1 cut(s) 331
Eco72I CACGTG 1 cut(s) 158
Eco81I CCTNAGG 1 cut(s) 113
EcoT14I CCWWGG 1 cut(s) 408
EcoT22I ATGCAT 1 cut(s) 861
EgeI GGCGCC 1 cut(s) 483
EheI GGCGCC 1 cut(s) 483
ErhI CCWWGG 1 cut(s) 408
FaeI CATG 3 cut(s) 175, 412, 643
FaiI YATR 5 cut(s) 173, 410, 641, 711, 807
FaqI GGGAC 2 cut(s) 290, 602
FatI CATG 3 cut(s) 171, 408, 639
FauI CCCGC 1 cut(s) 134
FblI GTMKAC 1 cut(s) 894
Fnu4HI GCNGC 5 cut(s) 280, 337, 415, 763, 907
FokI GGATG 2 cut(s) 512, 865
Fsp4HI GCNGC 5 cut(s) 280, 337, 415, 763, 907
GlaI GCGC 4 cut(s) 418, 469, 483, 766
GluI GCNGC 5 cut(s) 280, 337, 415, 763, 907
GsuI CTGGAG 1 cut(s) 707
HaeII RGCGCY 2 cut(s) 485, 768
HaeIII GGCC 8 cut(s) 22, 111, 162, 215, 279, 291, 523, 667
HapII CCGG 3 cut(s) 44, 585, 718
HgaI GACGC 1 cut(s) 512
HhaI GCGC 4 cut(s) 419, 470, 484, 767
Hin1I GRCGYC 2 cut(s) 482, 504
Hin1II CATG 3 cut(s) 175, 412, 643
Hin6I GCGC 4 cut(s) 417, 468, 482, 765
HinP1I GCGC 4 cut(s) 417, 468, 482, 765
HincII GTYRAC 1 cut(s) 895
HindII GTYRAC 1 cut(s) 895
HinfI GANTC 5 cut(s) 269, 404, 472, 643, 723
HpaII CCGG 3 cut(s) 44, 585, 718
HphI GGTGA 3 cut(s) 88, 115, 787
Hpy166II GTNNAC 2 cut(s) 178, 895
Hpy188I TCNGA 4 cut(s) 296, 432, 534, 933
Hpy188III TCNNGA 6 cut(s) 260, 307, 449, 538, 686, 838
Hpy8I GTNNAC 2 cut(s) 178, 895
Hpy99I CGWCG 7 cut(s) 317, 326, 467, 506, 551, 773, 851
HpyAV CCTTC 3 cut(s) 310, 400, 469
HpyCH4III ACNGT 2 cut(s) 387, 682
HpyCH4IV ACGT 4 cut(s) 157, 312, 542, 771
HpyCH4V TGCA 3 cut(s) 492, 859, 939
HpyF10VI GCNNNNNNNGC 6 cut(s) 19, 249, 254, 288, 520, 865
HpyF3I CTNAG 3 cut(s) 113, 531, 695
HpySE526I ACGT 4 cut(s) 157, 312, 542, 771
Hsp92I GRCGYC 2 cut(s) 482, 504
Hsp92II CATG 3 cut(s) 175, 412, 643
HspAI GCGC 4 cut(s) 417, 468, 482, 765
KasI GGCGCC 1 cut(s) 481
LguI GCTCTTC 1 cut(s) 125
LmnI GCTCC 4 cut(s) 10, 46, 287, 688
Lsp1109I GCAGC 1 cut(s) 774
LweI GCATC 1 cut(s) 846
MaeII ACGT 4 cut(s) 157, 312, 542, 771
MaeIII GTNAC 2 cut(s) 700, 775
MbiI CCGCTC 1 cut(s) 282
MboII GAAGA 9 cut(s) 112, 160, 217, 334, 337, 419, 464, 821, 836
MflI RGATCY 1 cut(s) 534
MhlI GDGCHC 2 cut(s) 38, 582
MluCI AATT 2 cut(s) 630, 949
Mly113I GGCGCC 1 cut(s) 482
MlyI GAGTC 2 cut(s) 413, 717
MmeI TCCRAC 1 cut(s) 906
Mph1103I ATGCAT 1 cut(s) 861
MroXI GAANNNNTTC 1 cut(s) 242
MslI CAYNNNNRTG 1 cut(s) 170
MspA1I CMGCKG 1 cut(s) 201
MspI CCGG 3 cut(s) 44, 585, 718
MspR9I CCNGG 1 cut(s) 586
Mva1269I GAATGC 1 cut(s) 859
MvnI CGCG 3 cut(s) 419, 470, 906
MwoI GCNNNNNNNGC 6 cut(s) 19, 249, 254, 288, 520, 865
NarI GGCGCC 1 cut(s) 482
NciI CCSGG 1 cut(s) 586
NcoI CCATGG 1 cut(s) 408
NlaIII CATG 3 cut(s) 175, 412, 643
NlaIV GGNNCC 2 cut(s) 37, 483
NmuCI GTSAC 1 cut(s) 775
NsiI ATGCAT 1 cut(s) 861
PceI AGGCCT 1 cut(s) 111
PciSI GCTCTTC 1 cut(s) 125
PcsI WCGNNNNNNNCGW 8 cut(s) 309, 318, 321, 447, 504, 765, 891, 906
PctI GAATGC 1 cut(s) 859
PdmI GAANNNNTTC 1 cut(s) 242
PfeI GAWTC 3 cut(s) 269, 472, 643
PflFI GACNNNGTC 1 cut(s) 506
PkrI GCNGC 5 cut(s) 281, 338, 416, 764, 908
PleI GAGTC 2 cut(s) 412, 717
PluTI GGCGCC 1 cut(s) 485
PmaCI CACGTG 1 cut(s) 158
PmlI CACGTG 1 cut(s) 158
PpsI GAGTC 2 cut(s) 412, 717
Ppu21I YACGTR 1 cut(s) 158
PshAI GACNNNNGTC 1 cut(s) 545
PspCI CACGTG 1 cut(s) 158
PspN4I GGNNCC 2 cut(s) 37, 483
PspPI GGNCC 3 cut(s) 175, 522, 666
PstNI CAGNNNCTG 1 cut(s) 538
PsuI RGATCY 1 cut(s) 534
PsyI GACNNNGTC 1 cut(s) 506
PvuII CAGCTG 1 cut(s) 201
RsaI GTAC 2 cut(s) 656, 679
RsaNI GTAC 2 cut(s) 655, 678
RseI CAYNNNNRTG 1 cut(s) 170
SalI GTCGAC 1 cut(s) 893
SapI GCTCTTC 1 cut(s) 125
SatI GCNGC 5 cut(s) 280, 337, 415, 763, 907
Sau96I GGNCC 3 cut(s) 175, 522, 666
SchI GAGTC 2 cut(s) 413, 717
ScrFI CCNGG 1 cut(s) 586
SduI GDGCHC 2 cut(s) 38, 582
SfaNI GCATC 1 cut(s) 846
SfoI GGCGCC 1 cut(s) 483
SinI GGWCC 1 cut(s) 175
SmiMI CAYNNNNRTG 1 cut(s) 170
SmlI CTYRAG 1 cut(s) 649
SmoI CTYRAG 1 cut(s) 649
Sse9I AATT 2 cut(s) 630, 949
SseBI AGGCCT 1 cut(s) 111
SsiI CCGC 8 cut(s) 127, 219, 280, 337, 414, 572, 635, 906
SspDI GGCGCC 1 cut(s) 481
StuI AGGCCT 1 cut(s) 111
StyD4I CCNGG 1 cut(s) 584
StyI CCWWGG 1 cut(s) 408
TaaI ACNGT 2 cut(s) 387, 682
TaiI ACGT 4 cut(s) 160, 315, 545, 774
TaqI TCGA 6 cut(s) 261, 267, 315, 462, 615, 894
TaqII GACCGA 1 cut(s) 595
TasI AATT 2 cut(s) 630, 949
TauI GCSGC 4 cut(s) 282, 339, 417, 909
TfiI GAWTC 3 cut(s) 269, 472, 643
TseFI GTSAC 1 cut(s) 775
TseI GCWGC 1 cut(s) 762
Tsp45I GTSAC 1 cut(s) 775
TspDTI ATGAA 4 cut(s) 17, 160, 656, 822
Tth111I GACNNNGTC 1 cut(s) 506
VpaK11BI GGWCC 1 cut(s) 175
XmiI GTMKAC 1 cut(s) 894
XmnI GAANNNNTTC 1 cut(s) 242
Zsp2I ATGCAT 1 cut(s) 861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.