Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0007755

Physical Location & Seq

Genomic Coordinates Reverse (-)

7863998 .. 7868384

Gene Structure 4387 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G064500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 690 bp

ATGGCGACGGCGCCAGTGAAGCCACCGCTGCACAACTTCCCTCTCGCATTCTTGAAATGGGGGGCGAAGAACAACTCGACCACCAACAACAACCACCGCTACCGCCGACCCGTCTCCGCCGAACCCGCCTCCGAGCCCGACTCCGAATCCGAACGCACCCACTACAACAACAGCCGGGTCGGATCCTCCCGCGCCTCCCGCCACCGCTACTCCTTGATCCCGTGCGCTGGCGACAAGCGTCGCAGGAGCGAGGAGAGAGAGAGCGATCAGGAGGAGGGCGAGGAAGCTGACAAAGCCGAGGTAGTTCACAAGCCCTGGAATCTGAGGCCCAGGAGAGCTCCGGCGACGACGTCGTTTTCCAAGGGAGGTGCCAACGGTGAACCGCACGAACTGGAGAGTCCGAACCCGAACCAGAGCGAGCTGCAGCAGCCGAAGTCGATGAGGTTGAGGGGTTTGGCGGCGGAGGGGCAGAATGTGGAGAAGAAAGAGAACAGGAAGTTCTGGATCGCTTTGTCAAAGGAGGAGATTGAAGAGGACATATTTGTGATGACTGGGTCGAGGCCTGCCAGAAGGCCCAAGAAGCGGCCGAAGAATGTTCAGAAACAGCTCGATATTACTTTTCCTGGGTTGTGGTTGGTGGGTGTTACTGCGGATGCTTACAAGGTTGCTGATTCTCCTTCTAAGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1639

Protein Analysis

230

Amino Acids

25.93

Weight (kDa)

9.76

Isoelectric Point (pI)

75.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007755)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17440 AT4G17440 AT4G17440 AT4G17440
fragaria_vesca	FvH4_3g31902 FvH4_4g15242 FvH4_5g19550
malus_domestica	MD04G1061000.v1.1 MD06G1054500.v1.1
prunus_persica	Prupe.5G064500_v2.0.a1 Prupe.5G064500_v2.0.a1
pyrus_communis	pycom04g05490 pycom06g04570
rosa_chinensis	RchiOBHm_Chr7g0204161
rosa_laevigata	RLG00000003483
rosa_multiflora	Rmu_sc0000571.1_g000026 Rmu_sc0011777.1_g000009
rosa_roxburghii	Rroxscaffold_3G00253280
rosa_rugosa	Rorug07G0081300
rosa_samantha	Rh7AG211200 Rh7BG209900 Rh7CG223800 Rh7DG218100
rosa_wichuraiana	Rw7G018380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	353
AccB1I	GGYRCC	2 cut(s)	10, 368
AccII	CGCG	1 cut(s)	192
AclWI	GGATC	4 cut(s)	177, 190, 211, 512
AcoI	YGGCCR	1 cut(s)	584
AcyI	GRCGYC	2 cut(s)	11, 350
AfiI	CCNNNNNNNGG	2 cut(s)	227, 582
AgsI	TTSAA	2 cut(s)	55, 530
AjnI	CCWGG	3 cut(s)	314, 329, 622
AluBI	AGCT	4 cut(s)	287, 338, 421, 607
AluI	AGCT	4 cut(s)	287, 338, 421, 607
Alw21I	GWGCWC	1 cut(s)	340
Alw26I	GTCTC	1 cut(s)	118
AlwI	GGATC	4 cut(s)	177, 190, 211, 512
AoxI	GGCC	4 cut(s)	326, 560, 572, 584
ApeKI	GCWGC	4 cut(s)	28, 421, 424, 427
AspLEI	GCGC	3 cut(s)	13, 194, 227
AspS9I	GGNCC	2 cut(s)	327, 573
AsuC2I	CCSGG	1 cut(s)	176
AsuHPI	GGTGA	1 cut(s)	389
BamHI	GGATCC	1 cut(s)	182
BanI	GGYRCC	2 cut(s)	10, 368
BanII	GRGCYC	2 cut(s)	138, 340
Bbv12I	GWGCWC	1 cut(s)	340
BbvI	GCAGC	4 cut(s)	15, 408, 436, 439
BceAI	ACGGC	1 cut(s)	24
BciT130I	CCWGG	3 cut(s)	316, 331, 624
BcnI	CCSGG	1 cut(s)	176
BcoDI	GTCTC	1 cut(s)	118
BfmI	CTRYAG	1 cut(s)	422
BfoI	RGCGCY	1 cut(s)	14
BisI	GCNGC	6 cut(s)	29, 422, 425, 428, 459, 584
BlsI	GCNGC	6 cut(s)	30, 423, 426, 429, 460, 585
Bme1390I	CCNGG	4 cut(s)	176, 316, 331, 624
BmgT120I	GGNCC	2 cut(s)	327, 573
BmiI	GGNNCC	3 cut(s)	12, 184, 370
BmrFI	CCNGG	4 cut(s)	176, 316, 331, 624
BmrI	ACTGGG	1 cut(s)	561
BmsI	GCATC	1 cut(s)	643
BmuI	ACTGGG	1 cut(s)	561
BoxI	GACNNNNGTC	1 cut(s)	237
BplI	GAGNNNNNCTC	2 cut(s)	125, 157
BpmI	CTGGAG	1 cut(s)	413
BpuMI	CCSGG	1 cut(s)	176
BsaHI	GRCGYC	2 cut(s)	11, 350
BsaJI	CCNNGG	5 cut(s)	297, 314, 329, 360, 623
BsaXI	ACNNNNNCTCC	2 cut(s)	194, 224
Bsc4I	CCNNNNNNNGG	2 cut(s)	227, 582
Bse1I	ACTGG	3 cut(s)	14, 396, 556
BseBI	CCWGG	3 cut(s)	316, 331, 624
BseDI	CCNNGG	5 cut(s)	297, 314, 329, 360, 623
BseGI	GGATG	1 cut(s)	658
BseLI	CCNNNNNNNGG	2 cut(s)	227, 582
BseMII	CTCAG	1 cut(s)	314
BseNI	ACTGG	3 cut(s)	14, 396, 556
BseRI	GAGGAG	3 cut(s)	266, 287, 536
BseX3I	CGGCCG	1 cut(s)	584
BseXI	GCAGC	4 cut(s)	15, 408, 436, 439
BsgI	GTGCAG	1 cut(s)	14
Bsh1236I	CGCG	1 cut(s)	192
Bsh1285I	CGRYCG	1 cut(s)	587
BshFI	GGCC	4 cut(s)	328, 562, 574, 586
BshNI	GGYRCC	2 cut(s)	10, 368
BsiEI	CGRYCG	1 cut(s)	587
BsiHKAI	GWGCWC	1 cut(s)	340
BsiSI	CCGG	2 cut(s)	175, 341
BslI	CCNNNNNNNGG	2 cut(s)	227, 582
BsmAI	GTCTC	1 cut(s)	118
BsmBI	CGTCTC	1 cut(s)	118
BsmI	GAATGC	1 cut(s)	47
BsnI	GGCC	4 cut(s)	328, 562, 574, 586
Bsp1286I	GDGCHC	2 cut(s)	138, 340
Bsp143I	GATC	4 cut(s)	182, 216, 265, 504
BspANI	GGCC	4 cut(s)	328, 562, 574, 586
BspCNI	CTCAG	1 cut(s)	315
BspFNI	CGCG	1 cut(s)	192
BspLI	GGNNCC	3 cut(s)	12, 184, 370
BspMAI	CTGCAG	1 cut(s)	426
BspPI	GGATC	4 cut(s)	177, 190, 211, 512
BspT107I	GGYRCC	2 cut(s)	10, 368
BsrI	ACTGG	3 cut(s)	14, 396, 556
BssECI	CCNNGG	5 cut(s)	297, 314, 329, 360, 623
BssMI	GATC	4 cut(s)	182, 216, 265, 504
BssNI	GRCGYC	2 cut(s)	11, 350
BssT1I	CCWWGG	1 cut(s)	360
Bst2UI	CCWGG	3 cut(s)	316, 331, 624
Bst4CI	ACNGT	1 cut(s)	377
Bst6I	CTCTTC	1 cut(s)	525
BstACI	GRCGYC	2 cut(s)	11, 350
BstC8I	GCNNGC	3 cut(s)	229, 419, 564
BstDEI	CTNAG	2 cut(s)	323, 681
BstF5I	GGATG	1 cut(s)	658
BstFNI	CGCG	1 cut(s)	192
BstH2I	RGCGCY	1 cut(s)	14
BstHHI	GCGC	3 cut(s)	13, 194, 227
BstKTI	GATC	4 cut(s)	185, 219, 268, 507
BstMAI	GTCTC	1 cut(s)	118
BstMBI	GATC	4 cut(s)	182, 216, 265, 504
BstMCI	CGRYCG	1 cut(s)	587
BstMWI	GCNNNNNNNGC	7 cut(s)	19, 28, 125, 198, 293, 427, 580
BstNI	CCWGG	3 cut(s)	316, 331, 624
BstPAI	GACNNNNGTC	1 cut(s)	237
BstSCI	CCNGG	4 cut(s)	174, 314, 329, 622
BstSFI	CTRYAG	1 cut(s)	422
BstUI	CGCG	1 cut(s)	192
BstV1I	GCAGC	4 cut(s)	15, 408, 436, 439
BstX2I	RGATCY	1 cut(s)	182
BstYI	RGATCY	1 cut(s)	182
BstZI	CGGCCG	1 cut(s)	584
BsuRI	GGCC	4 cut(s)	328, 562, 574, 586
BtsCI	GGATG	1 cut(s)	658
BtsIMutI	CAGTG	1 cut(s)	21
Cac8I	GCNNGC	3 cut(s)	229, 419, 564
CfoI	GCGC	3 cut(s)	13, 194, 227
Cfr13I	GGNCC	2 cut(s)	327, 573
CseI	GACGC	1 cut(s)	227
DdeI	CTNAG	2 cut(s)	323, 681
DinI	GGCGCC	1 cut(s)	12
DpnI	GATC	4 cut(s)	184, 218, 267, 506
DpnII	GATC	4 cut(s)	182, 216, 265, 504
EaeI	YGGCCR	1 cut(s)	584
EagI	CGGCCG	1 cut(s)	584
Eam1104I	CTCTTC	1 cut(s)	525
EarI	CTCTTC	1 cut(s)	525
EciI	GGCGGA	2 cut(s)	106, 476
Ecl136II	GAGCTC	1 cut(s)	338
EclXI	CGGCCG	1 cut(s)	584
Eco130I	CCWWGG	1 cut(s)	360
Eco147I	AGGCCT	1 cut(s)	562
Eco24I	GRGCYC	2 cut(s)	138, 340
Eco52I	CGGCCG	1 cut(s)	584
Eco53kI	GAGCTC	1 cut(s)	338
EcoICRI	GAGCTC	1 cut(s)	338
EcoRII	CCWGG	3 cut(s)	314, 329, 622
EcoT14I	CCWWGG	1 cut(s)	360
EcoT38I	GRGCYC	2 cut(s)	138, 340
EgeI	GGCGCC	1 cut(s)	12
EheI	GGCGCC	1 cut(s)	12
ErhI	CCWWGG	1 cut(s)	360
Esp3I	CGTCTC	1 cut(s)	118
FaiI	YATR	1 cut(s)	539
FauI	CCCGC	3 cut(s)	133, 197, 206
Fnu4HI	GCNGC	6 cut(s)	29, 422, 425, 428, 459, 584
FokI	GGATG	1 cut(s)	665
FriOI	GRGCYC	2 cut(s)	138, 340
Fsp4HI	GCNGC	6 cut(s)	29, 422, 425, 428, 459, 584
GlaI	GCGC	3 cut(s)	12, 193, 226
GluI	GCNGC	6 cut(s)	29, 422, 425, 428, 459, 584
GsuI	CTGGAG	1 cut(s)	413
HaeII	RGCGCY	1 cut(s)	14
HaeIII	GGCC	4 cut(s)	328, 562, 574, 586
HapII	CCGG	2 cut(s)	175, 341
HgaI	GACGC	1 cut(s)	227
HhaI	GCGC	3 cut(s)	13, 194, 227
Hin1I	GRCGYC	2 cut(s)	11, 350
Hin6I	GCGC	3 cut(s)	11, 192, 225
HinP1I	GCGC	3 cut(s)	11, 192, 225
HinfI	GANTC	5 cut(s)	140, 146, 319, 397, 671
HpaII	CCGG	2 cut(s)	175, 341
HphI	GGTGA	1 cut(s)	389
Hpy166II	GTNNAC	2 cut(s)	307, 380
Hpy188I	TCNGA	7 cut(s)	133, 145, 151, 182, 324, 402, 600
Hpy188III	TCNNGA	3 cut(s)	52, 269, 502
Hpy8I	GTNNAC	2 cut(s)	307, 380
Hpy99I	CGWCG	5 cut(s)	10, 243, 349, 352, 355
HpyAV	CCTTC	2 cut(s)	564, 687
HpyCH4III	ACNGT	1 cut(s)	377
HpyCH4IV	ACGT	1 cut(s)	350
HpyCH4V	TGCA	2 cut(s)	31, 424
HpyF10VI	GCNNNNNNNGC	7 cut(s)	19, 28, 125, 198, 293, 427, 580
HpyF3I	CTNAG	2 cut(s)	323, 681
HpySE526I	ACGT	1 cut(s)	350
Hsp92I	GRCGYC	2 cut(s)	11, 350
HspAI	GCGC	3 cut(s)	11, 192, 225
KasI	GGCGCC	1 cut(s)	10
Kzo9I	GATC	4 cut(s)	182, 216, 265, 504
LmnI	GCTCC	2 cut(s)	246, 343
Lsp1109I	GCAGC	4 cut(s)	15, 408, 436, 439
LweI	GCATC	1 cut(s)	643
MaeII	ACGT	1 cut(s)	350
MaeIII	GTNAC	1 cut(s)	643
MalI	GATC	4 cut(s)	184, 218, 267, 506
MboI	GATC	4 cut(s)	182, 216, 265, 504
MboII	GAAGA	4 cut(s)	79, 493, 542, 601
MflI	RGATCY	1 cut(s)	182
MhlI	GDGCHC	2 cut(s)	138, 340
Mly113I	GGCGCC	1 cut(s)	11
MlyI	GAGTC	2 cut(s)	134, 406
MmeI	TCCRAC	1 cut(s)	160
MslI	CAYNNNNRTG	1 cut(s)	542
MspA1I	CMGCKG	1 cut(s)	28
MspI	CCGG	2 cut(s)	175, 341
MspR9I	CCNGG	4 cut(s)	176, 316, 331, 624
Mva1269I	GAATGC	1 cut(s)	47
MvaI	CCWGG	3 cut(s)	316, 331, 624
MvnI	CGCG	1 cut(s)	192
MwoI	GCNNNNNNNGC	7 cut(s)	19, 28, 125, 198, 293, 427, 580
NarI	GGCGCC	1 cut(s)	11
NciI	CCSGG	1 cut(s)	176
NdeII	GATC	4 cut(s)	182, 216, 265, 504
NlaIV	GGNNCC	3 cut(s)	12, 184, 370
NmeAIII	GCCGAG	1 cut(s)	322
PceI	AGGCCT	1 cut(s)	562
PctI	GAATGC	1 cut(s)	47
PfeI	GAWTC	3 cut(s)	146, 319, 671
PflFI	GACNNNGTC	2 cut(s)	349, 553
PkrI	GCNGC	6 cut(s)	30, 423, 426, 429, 460, 585
PleI	GAGTC	2 cut(s)	134, 405
PluTI	GGCGCC	1 cut(s)	14
PpsI	GAGTC	2 cut(s)	134, 405
PshAI	GACNNNNGTC	1 cut(s)	237
Psp124BI	GAGCTC	1 cut(s)	340
Psp6I	CCWGG	3 cut(s)	314, 329, 622
PspGI	CCWGG	3 cut(s)	314, 329, 622
PspN4I	GGNNCC	3 cut(s)	12, 184, 370
PspPI	GGNCC	2 cut(s)	327, 573
PstI	CTGCAG	1 cut(s)	426
PsuI	RGATCY	1 cut(s)	182
PsyI	GACNNNGTC	2 cut(s)	349, 553
RseI	CAYNNNNRTG	1 cut(s)	542
SacI	GAGCTC	1 cut(s)	340
SatI	GCNGC	6 cut(s)	29, 422, 425, 428, 459, 584
Sau3AI	GATC	4 cut(s)	182, 216, 265, 504
Sau96I	GGNCC	2 cut(s)	327, 573
SchI	GAGTC	2 cut(s)	134, 406
ScrFI	CCNGG	4 cut(s)	176, 316, 331, 624
SduI	GDGCHC	2 cut(s)	138, 340
SfaNI	GCATC	1 cut(s)	643
SfcI	CTRYAG	1 cut(s)	422
SfoI	GGCGCC	1 cut(s)	12
SmiMI	CAYNNNNRTG	1 cut(s)	542
SseBI	AGGCCT	1 cut(s)	562
SspDI	GGCGCC	1 cut(s)	10
SstI	GAGCTC	1 cut(s)	340
StuI	AGGCCT	1 cut(s)	562
StyD4I	CCNGG	4 cut(s)	174, 314, 329, 622
StyI	CCWWGG	1 cut(s)	360
TaaI	ACNGT	1 cut(s)	377
TaiI	ACGT	1 cut(s)	353
TaqI	TCGA	4 cut(s)	77, 437, 557, 609
TauI	GCSGC	2 cut(s)	461, 586
TfiI	GAWTC	3 cut(s)	146, 319, 671
TscAI	CASTG	1 cut(s)	21
TseI	GCWGC	4 cut(s)	28, 421, 424, 427
TspRI	CASTG	1 cut(s)	21
Tth111I	GACNNNGTC	2 cut(s)	349, 553
ZraI	GACGTC	1 cut(s)	351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.