Rh7AG211200

Protein of unknown function (DUF1639)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0007755
Physical Location & Seq
Forward (+)
19401851 .. 19402802
952 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG211200.1

Sequence Viewer

Length: 732 bp
ATGGCAACAGCGCCGGTGAAGCCGCCGCTGCACAACTTCCCGCTATCGTTCTTGAAATGGGGGAGCAAGAACCACACCAACACCAACCACCGCTACCGCCGCCCCGTCTCCGCCGAGCCCGAACCGTCCGACGATTCCGAGCAGCCGCACCAGCACCACCACGGCAATCGCGTCGGATCCCGCACCGCGCGCCACCGCTTCTCGCTCACTTCCTGCTCCGAGAAGCTTCCGAGGTCGCAGAATTCCGAGAAAGAGAGCGAGGACAGCGACGACGACGGTAAGGGCGCGGCCGCCACCGCCGCGGCGGCGGAGGAGGCTGAGGTTCAGAAGCCGTGGAATCTGAGGCCGAGGAGAGCACCGGCTTCGATGACGACGGCGATGACTTCGAAGGCGAATAATACTACTACTGCGAACGGCGAGCTGCATGAGCCGGAGGGTCCGAACCCGAACCCGAAGCAGGGCGAGCAGCCGGCGCCGAAGTCGATGAGGCTGAGGGGTTTGGCTGAAGGTCCGAGCATGGAGAAGAAGAAGGAGAAGAGGAAGTTCTGGATCGCTTTGTCTAAGGATGAAATTGAAGAGGACATATTCATCATGACCGGGTCCAGACCCGCCCGGCGGCCCAAGAAGCGGCCCAAGAATGTCCAGAAACAGCTCGATAATTGTTTTCCGGGTTTATGGCTCGTGGGGTTTACAGCTGATGCTTATCGGGGTGCCGATTCTCCGACTAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1639

Protein Analysis

243

Amino Acids

27.09

Weight (kDa)

9.58

Isoelectric Point (pI)

56.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1639 PF07797 186 - 235 4.9e-26 Protein of unknown function (DUF1639)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 472, 710
AccII CGCG 5 cut(s) 171, 188, 190, 287, 302
AclWI GGATC 3 cut(s) 171, 184, 557
AcoI YGGCCR 1 cut(s) 288
AcsI RAATTY 1 cut(s) 241
AcuI CTGAAG 1 cut(s) 525
AcyI GRCGYC 1 cut(s) 473
AfiI CCNNNNNNNGG 4 cut(s) 457, 458, 615, 627
AgsI TTSAA 2 cut(s) 55, 575
AluBI AGCT 4 cut(s) 226, 421, 652, 695
AluI AGCT 4 cut(s) 226, 421, 652, 695
Alw21I GWGCWC 1 cut(s) 358
Alw26I GTCTC 1 cut(s) 112
AlwI GGATC 3 cut(s) 171, 184, 557
AoxI GGCC 4 cut(s) 288, 344, 617, 629
ApeKI GCWGC 4 cut(s) 28, 142, 421, 466
ApoI RAATTY 1 cut(s) 241
AspLEI GCGC 5 cut(s) 13, 190, 192, 287, 475
AspS9I GGNCC 5 cut(s) 437, 509, 600, 618, 630
AsuC2I CCSGG 3 cut(s) 598, 613, 669
AsuHPI GGTGA 1 cut(s) 28
AsuII TTCGAA 1 cut(s) 386
AvaII GGWCC 3 cut(s) 437, 509, 600
BamHI GGATCC 1 cut(s) 176
BanI GGYRCC 2 cut(s) 472, 710
BanII GRGCYC 1 cut(s) 120
BauI CACGAG 1 cut(s) 680
Bbv12I GWGCWC 1 cut(s) 358
BbvCI CCTCAGC 2 cut(s) 318, 491
BbvI GCAGC 4 cut(s) 15, 154, 408, 478
BceAI ACGGC 4 cut(s) 178, 316, 390, 430
BcgI CGANNNNNNTGC 4 cut(s) 154, 188, 345, 379
BcnI CCSGG 3 cut(s) 598, 613, 669
BcoDI GTCTC 1 cut(s) 112
BfoI RGCGCY 2 cut(s) 14, 476
BglI GCCNNNNNGGC 1 cut(s) 305
Bme1390I CCNGG 3 cut(s) 598, 613, 669
Bme18I GGWCC 3 cut(s) 437, 509, 600
BmgT120I GGNCC 5 cut(s) 437, 509, 600, 618, 630
BmiI GGNNCC 5 cut(s) 178, 438, 474, 601, 712
BmrFI CCNGG 3 cut(s) 598, 613, 669
BmsI GCATC 1 cut(s) 688
Bpu10I CCTNAGC 2 cut(s) 318, 491
Bpu14I TTCGAA 1 cut(s) 386
BpuMI CCSGG 3 cut(s) 598, 613, 669
BsaBI GATNNNNATC 1 cut(s) 702
BsaHI GRCGYC 1 cut(s) 473
BsaJI CCNNGG 5 cut(s) 160, 230, 300, 332, 347
Bsc4I CCNNNNNNNGG 4 cut(s) 457, 458, 615, 627
Bse118I RCCGGY 3 cut(s) 13, 358, 469
Bse8I GATNNNNATC 1 cut(s) 702
BseDI CCNNGG 5 cut(s) 160, 230, 300, 332, 347
BseGI GGATG 1 cut(s) 571
BseJI GATNNNNATC 1 cut(s) 702
BseLI CCNNNNNNNGG 4 cut(s) 457, 458, 615, 627
BseMII CTCAG 3 cut(s) 309, 332, 482
BsePI GCGCGC 1 cut(s) 188
BseRI GAGGAG 2 cut(s) 326, 364
BseX3I CGGCCG 1 cut(s) 288
BseXI GCAGC 4 cut(s) 15, 154, 408, 478
BsgI GTGCAG 1 cut(s) 14
Bsh1236I CGCG 5 cut(s) 171, 188, 190, 287, 302
Bsh1285I CGRYCG 1 cut(s) 291
BshFI GGCC 4 cut(s) 290, 346, 619, 631
BshNI GGYRCC 2 cut(s) 472, 710
BsiEI CGRYCG 1 cut(s) 291
BsiHKAI GWGCWC 1 cut(s) 358
BsiSI CCGG 7 cut(s) 14, 359, 431, 470, 597, 613, 668
BslI CCNNNNNNNGG 4 cut(s) 457, 458, 615, 627
BsmAI GTCTC 1 cut(s) 112
BsmBI CGTCTC 1 cut(s) 112
BsnI GGCC 4 cut(s) 290, 346, 619, 631
Bsp119I TTCGAA 1 cut(s) 386
Bsp1286I GDGCHC 2 cut(s) 120, 358
Bsp143I GATC 2 cut(s) 176, 549
BspANI GGCC 4 cut(s) 290, 346, 619, 631
BspCNI CTCAG 3 cut(s) 310, 333, 483
BspFNI CGCG 5 cut(s) 171, 188, 190, 287, 302
BspHI TCATGA 1 cut(s) 591
BspLI GGNNCC 5 cut(s) 178, 438, 474, 601, 712
BspPI GGATC 3 cut(s) 171, 184, 557
BspT104I TTCGAA 1 cut(s) 386
BspT107I GGYRCC 2 cut(s) 472, 710
BsrFI RCCGGY 3 cut(s) 13, 358, 469
BssAI RCCGGY 3 cut(s) 13, 358, 469
BssECI CCNNGG 5 cut(s) 160, 230, 300, 332, 347
BssHII GCGCGC 1 cut(s) 188
BssMI GATC 2 cut(s) 176, 549
BssNI GRCGYC 1 cut(s) 473
BssSI CACGAG 1 cut(s) 680
Bst2BI CACGAG 1 cut(s) 680
Bst4CI ACNGT 2 cut(s) 126, 278
Bst6I CTCTTC 2 cut(s) 530, 570
BstACI GRCGYC 1 cut(s) 473
BstBI TTCGAA 1 cut(s) 386
BstC8I GCNNGC 4 cut(s) 190, 419, 464, 471
BstDEI CTNAG 5 cut(s) 318, 341, 491, 561, 726
BstDSI CCRYGG 3 cut(s) 160, 300, 332
BstF5I GGATG 1 cut(s) 571
BstFNI CGCG 5 cut(s) 171, 188, 190, 287, 302
BstH2I RGCGCY 2 cut(s) 14, 476
BstHHI GCGC 5 cut(s) 13, 190, 192, 287, 475
BstKTI GATC 2 cut(s) 179, 552
BstMAI GTCTC 1 cut(s) 112
BstMBI GATC 2 cut(s) 176, 549
BstMCI CGRYCG 1 cut(s) 291
BstSCI CCNGG 3 cut(s) 596, 611, 667
BstUI CGCG 5 cut(s) 171, 188, 190, 287, 302
BstV1I GCAGC 4 cut(s) 15, 154, 408, 478
BstX2I RGATCY 1 cut(s) 176
BstYI RGATCY 1 cut(s) 176
BstZI CGGCCG 1 cut(s) 288
BsuRI GGCC 4 cut(s) 290, 346, 619, 631
BtgI CCRYGG 3 cut(s) 160, 300, 332
BtgZI GCGATG 1 cut(s) 392
BtsCI GGATG 1 cut(s) 571
Cac8I GCNNGC 4 cut(s) 190, 419, 464, 471
CciI TCATGA 1 cut(s) 591
CciNI GCGGCCGC 1 cut(s) 288
CfoI GCGC 5 cut(s) 13, 190, 192, 287, 475
Cfr10I RCCGGY 3 cut(s) 13, 358, 469
Cfr13I GGNCC 5 cut(s) 437, 509, 600, 618, 630
Cfr42I CCGCGG 1 cut(s) 303
CseI GACGC 1 cut(s) 160
CviAII CATG 3 cut(s) 425, 517, 592
DdeI CTNAG 5 cut(s) 318, 341, 491, 561, 726
DinI GGCGCC 1 cut(s) 474
DpnI GATC 2 cut(s) 178, 551
DpnII GATC 2 cut(s) 176, 549
EaeI YGGCCR 1 cut(s) 288
EagI CGGCCG 1 cut(s) 288
Eam1104I CTCTTC 2 cut(s) 530, 570
EarI CTCTTC 2 cut(s) 530, 570
EciI GGCGGA 2 cut(s) 100, 323
EclXI CGGCCG 1 cut(s) 288
Eco24I GRGCYC 1 cut(s) 120
Eco47I GGWCC 3 cut(s) 437, 509, 600
Eco52I CGGCCG 1 cut(s) 288
Eco57I CTGAAG 1 cut(s) 525
EcoRI GAATTC 1 cut(s) 241
EcoT38I GRGCYC 1 cut(s) 120
EgeI GGCGCC 1 cut(s) 474
EheI GGCGCC 1 cut(s) 474
Esp3I CGTCTC 1 cut(s) 112
FaeI CATG 3 cut(s) 428, 520, 595
FaiI YATR 5 cut(s) 426, 518, 584, 593, 676
FatI CATG 3 cut(s) 424, 516, 591
FauI CCCGC 3 cut(s) 48, 188, 616
FokI GGATG 1 cut(s) 578
FriOI GRGCYC 1 cut(s) 120
GlaI GCGC 5 cut(s) 12, 189, 191, 286, 474
HaeII RGCGCY 2 cut(s) 14, 476
HaeIII GGCC 4 cut(s) 290, 346, 619, 631
HapII CCGG 7 cut(s) 14, 359, 431, 470, 597, 613, 668
HgaI GACGC 1 cut(s) 160
HhaI GCGC 5 cut(s) 13, 190, 192, 287, 475
Hin1I GRCGYC 1 cut(s) 473
Hin1II CATG 3 cut(s) 428, 520, 595
Hin6I GCGC 5 cut(s) 11, 188, 190, 285, 473
HinP1I GCGC 5 cut(s) 11, 188, 190, 285, 473
HindIII AAGCTT 1 cut(s) 224
HinfI GANTC 3 cut(s) 134, 337, 716
HpaII CCGG 7 cut(s) 14, 359, 431, 470, 597, 613, 668
HphI GGTGA 1 cut(s) 28
Hpy166II GTNNAC 1 cut(s) 690
Hpy188III TCNNGA 5 cut(s) 52, 547, 592, 603, 643
Hpy8I GTNNAC 1 cut(s) 690
Hpy99I CGWCG 6 cut(s) 134, 176, 272, 275, 278, 376
HpyAV CCTTC 3 cut(s) 382, 500, 523
HpyCH4III ACNGT 2 cut(s) 126, 278
HpyCH4V TGCA 2 cut(s) 31, 424
HpyF3I CTNAG 5 cut(s) 318, 341, 491, 561, 726
Hsp92I GRCGYC 1 cut(s) 473
Hsp92II CATG 3 cut(s) 428, 520, 595
HspAI GCGC 5 cut(s) 11, 188, 190, 285, 473
KasI GGCGCC 1 cut(s) 472
KroI GCCGGC 1 cut(s) 469
KroNI GCCGGC 1 cut(s) 471
KspI CCGCGG 1 cut(s) 303
Kzo9I GATC 2 cut(s) 176, 549
LmnI GCTCC 2 cut(s) 63, 221
Lsp1109I GCAGC 4 cut(s) 15, 154, 408, 478
LweI GCATC 1 cut(s) 688
MalI GATC 2 cut(s) 178, 551
MboI GATC 2 cut(s) 176, 549
MboII GAAGA 4 cut(s) 535, 538, 547, 587
MflI RGATCY 1 cut(s) 176
MhlI GDGCHC 2 cut(s) 120, 358
MluCI AATT 3 cut(s) 241, 570, 658
Mly113I GGCGCC 1 cut(s) 473
MmeI TCCRAC 2 cut(s) 153, 154
MroNI GCCGGC 1 cut(s) 469
MspA1I CMGCKG 3 cut(s) 28, 302, 695
MspI CCGG 7 cut(s) 14, 359, 431, 470, 597, 613, 668
MspR9I CCNGG 3 cut(s) 598, 613, 669
MvnI CGCG 5 cut(s) 171, 188, 190, 287, 302
NaeI GCCGGC 1 cut(s) 471
NarI GGCGCC 1 cut(s) 473
NciI CCSGG 3 cut(s) 598, 613, 669
NdeII GATC 2 cut(s) 176, 549
NgoMIV GCCGGC 1 cut(s) 469
NlaIII CATG 3 cut(s) 428, 520, 595
NlaIV GGNNCC 5 cut(s) 178, 438, 474, 601, 712
NmeAIII GCCGAG 2 cut(s) 139, 372
NotI GCGGCCGC 1 cut(s) 288
NspV TTCGAA 1 cut(s) 386
PagI TCATGA 1 cut(s) 591
PauI GCGCGC 1 cut(s) 188
PcsI WCGNNNNNNNCGW 1 cut(s) 168
PdiI GCCGGC 1 cut(s) 471
PfeI GAWTC 3 cut(s) 134, 337, 716
PflFI GACNNNGTC 1 cut(s) 598
PluTI GGCGCC 1 cut(s) 476
PspN4I GGNNCC 5 cut(s) 178, 438, 474, 601, 712
PspPI GGNCC 5 cut(s) 437, 509, 600, 618, 630
PsuI RGATCY 1 cut(s) 176
PsyI GACNNNGTC 1 cut(s) 598
PteI GCGCGC 1 cut(s) 188
PvuII CAGCTG 1 cut(s) 695
SacII CCGCGG 1 cut(s) 303
Sau3AI GATC 2 cut(s) 176, 549
Sau96I GGNCC 5 cut(s) 437, 509, 600, 618, 630
ScrFI CCNGG 3 cut(s) 598, 613, 669
SduI GDGCHC 2 cut(s) 120, 358
SetI ASST 7 cut(s) 228, 236, 324, 423, 511, 654, 697
SfaNI GCATC 1 cut(s) 688
SfoI GGCGCC 1 cut(s) 474
Sfr303I CCGCGG 1 cut(s) 303
SfuI TTCGAA 1 cut(s) 386
SgrAI CRCCGGYG 1 cut(s) 13
SgrBI CCGCGG 1 cut(s) 303
SinI GGWCC 3 cut(s) 437, 509, 600
Sse9I AATT 3 cut(s) 241, 570, 658
SspDI GGCGCC 1 cut(s) 472
StyD4I CCNGG 3 cut(s) 596, 611, 667
TaaI ACNGT 2 cut(s) 126, 278
TaqI TCGA 4 cut(s) 365, 386, 482, 654
TasI AATT 3 cut(s) 241, 570, 658
TfiI GAWTC 3 cut(s) 134, 337, 716
TseI GCWGC 4 cut(s) 28, 142, 421, 466
TspDTI ATGAA 2 cut(s) 577, 582
Tth111I GACNNNGTC 1 cut(s) 598
VpaK11BI GGWCC 3 cut(s) 437, 509, 600
XapI RAATTY 1 cut(s) 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.