Rh7CG223800

Protein of unknown function (DUF1639)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0007755
Physical Location & Seq
Forward (+)
20639060 .. 20642330
3271 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG223800.1

Sequence Viewer

Length: 675 bp
ATGGCAACAGCGCCGGTGAAGCCGCCGCTGCACAACTTCCCGCTATCGTTCTTGAAATGGGGGAGCAAGAACCACACCAACACCAACCACCGCTACCGCCGCCCCGTCTCCGCCGAGCCCGAACCGTCCGACGATTCCGAGCCGCCGCAGCACCACCACGGCAACCGCGTCGGATCCCGCACCGCGCGCCACCGCTTCTCGCTCACTTCCTGCTCCGAGAAGCTTCCGAGGTCGCAGAATTCCGAGAAAGAGAGCGAGGACAGCGACGACGACGGTAAGGCCGCGGCCGCCACCGCCGCGGCGGCGGAGGAGGCTGAGGTTCAGAAGCCGTGGAATCTGAGGCCGAGGCGAGCACCGACGGCGATGACTTCGAAGGCGAATAATACTACTACTGCAAACGGCGAGCTGCATGAACCGGAGGGTCCGAACCCGAACCCGAAGCAGGGCGAGCAGCCGGCGCCGAAGTCGATGAGGCTGAGGGGTTTGGCTGAAGGTCCGAGCATGGAGAAGAAGAAGGAGAAGAGGAAGTTCTGGATCGCTTTGTCTAAGGATGAAATTGAAGAGGACATATTCATCATGACCGGGTCCAGACCCGCCCGGCGGCCCAAGAAGCGGCCCAAGAATGTCCAGAAACAGCTCGATGTATGCTATGCTCTTCGCTTTGATTTCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1639

Protein Analysis

224

Amino Acids

25.2

Weight (kDa)

9.61

Isoelectric Point (pI)

60.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1639 PF07797 181 - 216 4.8e-18 Protein of unknown function (DUF1639)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 457
AccII CGCG 5 cut(s) 168, 185, 187, 284, 299
AclWI GGATC 3 cut(s) 168, 181, 542
AcoI YGGCCR 1 cut(s) 285
AcsI RAATTY 1 cut(s) 238
AcuI CTGAAG 1 cut(s) 510
AcyI GRCGYC 1 cut(s) 458
AfiI CCNNNNNNNGG 4 cut(s) 442, 443, 600, 612
AgsI TTSAA 2 cut(s) 55, 560
AluBI AGCT 3 cut(s) 223, 406, 637
AluI AGCT 3 cut(s) 223, 406, 637
Alw21I GWGCWC 1 cut(s) 355
Alw26I GTCTC 1 cut(s) 112
AlwI GGATC 3 cut(s) 168, 181, 542
AoxI GGCC 5 cut(s) 279, 285, 341, 602, 614
ApeKI GCWGC 4 cut(s) 28, 148, 406, 451
ApoI RAATTY 1 cut(s) 238
AspLEI GCGC 4 cut(s) 13, 187, 189, 460
AspS9I GGNCC 5 cut(s) 422, 494, 585, 603, 615
AsuC2I CCSGG 2 cut(s) 583, 598
AsuHPI GGTGA 1 cut(s) 28
AsuII TTCGAA 1 cut(s) 371
AvaII GGWCC 3 cut(s) 422, 494, 585
BamHI GGATCC 1 cut(s) 173
BanI GGYRCC 1 cut(s) 457
BanII GRGCYC 1 cut(s) 120
Bbv12I GWGCWC 1 cut(s) 355
BbvCI CCTCAGC 2 cut(s) 315, 476
BbvI GCAGC 4 cut(s) 15, 160, 393, 463
BceAI ACGGC 4 cut(s) 175, 313, 375, 415
BcgI CGANNNNNNTGC 2 cut(s) 151, 185
BcnI CCSGG 2 cut(s) 583, 598
BcoDI GTCTC 1 cut(s) 112
BfoI RGCGCY 2 cut(s) 14, 461
BglI GCCNNNNNGGC 1 cut(s) 302
Bme1390I CCNGG 2 cut(s) 583, 598
Bme18I GGWCC 3 cut(s) 422, 494, 585
BmgT120I GGNCC 5 cut(s) 422, 494, 585, 603, 615
BmiI GGNNCC 4 cut(s) 175, 423, 459, 586
BmrFI CCNGG 2 cut(s) 583, 598
Bpu10I CCTNAGC 2 cut(s) 315, 476
Bpu14I TTCGAA 1 cut(s) 371
BpuMI CCSGG 2 cut(s) 583, 598
BsaHI GRCGYC 1 cut(s) 458
BsaJI CCNNGG 6 cut(s) 157, 227, 282, 297, 329, 344
BsaWI WCCGGW 1 cut(s) 415
Bsc4I CCNNNNNNNGG 4 cut(s) 442, 443, 600, 612
Bse118I RCCGGY 2 cut(s) 13, 454
BseDI CCNNGG 6 cut(s) 157, 227, 282, 297, 329, 344
BseGI GGATG 1 cut(s) 556
BseLI CCNNNNNNNGG 4 cut(s) 442, 443, 600, 612
BseMII CTCAG 3 cut(s) 306, 329, 467
BsePI GCGCGC 1 cut(s) 185
BseRI GAGGAG 1 cut(s) 323
BseX3I CGGCCG 1 cut(s) 285
BseXI GCAGC 4 cut(s) 15, 160, 393, 463
BsgI GTGCAG 1 cut(s) 14
Bsh1236I CGCG 5 cut(s) 168, 185, 187, 284, 299
Bsh1285I CGRYCG 1 cut(s) 288
BshFI GGCC 5 cut(s) 281, 287, 343, 604, 616
BshNI GGYRCC 1 cut(s) 457
BsiEI CGRYCG 1 cut(s) 288
BsiHKAI GWGCWC 1 cut(s) 355
BsiSI CCGG 5 cut(s) 14, 416, 455, 582, 598
BslI CCNNNNNNNGG 4 cut(s) 442, 443, 600, 612
BsmAI GTCTC 1 cut(s) 112
BsmBI CGTCTC 1 cut(s) 112
BsnI GGCC 5 cut(s) 281, 287, 343, 604, 616
Bsp119I TTCGAA 1 cut(s) 371
Bsp1286I GDGCHC 2 cut(s) 120, 355
Bsp143I GATC 2 cut(s) 173, 534
BspANI GGCC 5 cut(s) 281, 287, 343, 604, 616
BspCNI CTCAG 3 cut(s) 307, 330, 468
BspFNI CGCG 5 cut(s) 168, 185, 187, 284, 299
BspHI TCATGA 1 cut(s) 576
BspLI GGNNCC 4 cut(s) 175, 423, 459, 586
BspPI GGATC 3 cut(s) 168, 181, 542
BspQI GCTCTTC 1 cut(s) 660
BspT104I TTCGAA 1 cut(s) 371
BspT107I GGYRCC 1 cut(s) 457
BsrFI RCCGGY 2 cut(s) 13, 454
BssAI RCCGGY 2 cut(s) 13, 454
BssECI CCNNGG 6 cut(s) 157, 227, 282, 297, 329, 344
BssHII GCGCGC 1 cut(s) 185
BssMI GATC 2 cut(s) 173, 534
BssNI GRCGYC 1 cut(s) 458
Bst4CI ACNGT 2 cut(s) 126, 275
Bst6I CTCTTC 3 cut(s) 515, 555, 660
BstACI GRCGYC 1 cut(s) 458
BstBI TTCGAA 1 cut(s) 371
BstC8I GCNNGC 5 cut(s) 187, 351, 404, 449, 456
BstDEI CTNAG 4 cut(s) 315, 338, 476, 546
BstDSI CCRYGG 4 cut(s) 157, 282, 297, 329
BstF5I GGATG 1 cut(s) 556
BstFNI CGCG 5 cut(s) 168, 185, 187, 284, 299
BstH2I RGCGCY 2 cut(s) 14, 461
BstHHI GCGC 4 cut(s) 13, 187, 189, 460
BstKTI GATC 2 cut(s) 176, 537
BstMAI GTCTC 1 cut(s) 112
BstMBI GATC 2 cut(s) 173, 534
BstMCI CGRYCG 1 cut(s) 288
BstSCI CCNGG 2 cut(s) 581, 596
BstUI CGCG 5 cut(s) 168, 185, 187, 284, 299
BstV1I GCAGC 4 cut(s) 15, 160, 393, 463
BstX2I RGATCY 1 cut(s) 173
BstYI RGATCY 1 cut(s) 173
BstZI CGGCCG 1 cut(s) 285
BsuRI GGCC 5 cut(s) 281, 287, 343, 604, 616
BtgI CCRYGG 4 cut(s) 157, 282, 297, 329
BtgZI GCGATG 1 cut(s) 377
BtsCI GGATG 1 cut(s) 556
Cac8I GCNNGC 5 cut(s) 187, 351, 404, 449, 456
CciI TCATGA 1 cut(s) 576
CciNI GCGGCCGC 1 cut(s) 285
CfoI GCGC 4 cut(s) 13, 187, 189, 460
Cfr10I RCCGGY 2 cut(s) 13, 454
Cfr13I GGNCC 5 cut(s) 422, 494, 585, 603, 615
Cfr42I CCGCGG 2 cut(s) 285, 300
CseI GACGC 1 cut(s) 157
CviAII CATG 3 cut(s) 410, 502, 577
DdeI CTNAG 4 cut(s) 315, 338, 476, 546
DinI GGCGCC 1 cut(s) 459
DpnI GATC 2 cut(s) 175, 536
DpnII GATC 2 cut(s) 173, 534
EaeI YGGCCR 1 cut(s) 285
EagI CGGCCG 1 cut(s) 285
Eam1104I CTCTTC 3 cut(s) 515, 555, 660
EarI CTCTTC 3 cut(s) 515, 555, 660
EciI GGCGGA 2 cut(s) 100, 320
EclXI CGGCCG 1 cut(s) 285
Eco24I GRGCYC 1 cut(s) 120
Eco47I GGWCC 3 cut(s) 422, 494, 585
Eco52I CGGCCG 1 cut(s) 285
Eco57I CTGAAG 1 cut(s) 510
EcoRI GAATTC 1 cut(s) 238
EcoT38I GRGCYC 1 cut(s) 120
EgeI GGCGCC 1 cut(s) 459
EheI GGCGCC 1 cut(s) 459
Esp3I CGTCTC 1 cut(s) 112
FaeI CATG 3 cut(s) 413, 505, 580
FaiI YATR 6 cut(s) 411, 503, 569, 578, 646, 651
FatI CATG 3 cut(s) 409, 501, 576
FauI CCCGC 3 cut(s) 48, 185, 601
FokI GGATG 1 cut(s) 563
FriOI GRGCYC 1 cut(s) 120
GlaI GCGC 4 cut(s) 12, 186, 188, 459
HaeII RGCGCY 2 cut(s) 14, 461
HaeIII GGCC 5 cut(s) 281, 287, 343, 604, 616
HapII CCGG 5 cut(s) 14, 416, 455, 582, 598
HgaI GACGC 1 cut(s) 157
HhaI GCGC 4 cut(s) 13, 187, 189, 460
Hin1I GRCGYC 1 cut(s) 458
Hin1II CATG 3 cut(s) 413, 505, 580
Hin6I GCGC 4 cut(s) 11, 185, 187, 458
HinP1I GCGC 4 cut(s) 11, 185, 187, 458
HindIII AAGCTT 1 cut(s) 221
HinfI GANTC 2 cut(s) 134, 334
HpaII CCGG 5 cut(s) 14, 416, 455, 582, 598
HphI GGTGA 1 cut(s) 28
Hpy188III TCNNGA 5 cut(s) 52, 532, 577, 588, 628
Hpy99I CGWCG 6 cut(s) 134, 173, 269, 272, 275, 361
HpyAV CCTTC 3 cut(s) 367, 485, 508
HpyCH4III ACNGT 2 cut(s) 126, 275
HpyCH4V TGCA 3 cut(s) 31, 395, 409
HpyF3I CTNAG 4 cut(s) 315, 338, 476, 546
Hsp92I GRCGYC 1 cut(s) 458
Hsp92II CATG 3 cut(s) 413, 505, 580
HspAI GCGC 4 cut(s) 11, 185, 187, 458
KasI GGCGCC 1 cut(s) 457
KroI GCCGGC 1 cut(s) 454
KroNI GCCGGC 1 cut(s) 456
KspI CCGCGG 2 cut(s) 285, 300
Kzo9I GATC 2 cut(s) 173, 534
LguI GCTCTTC 1 cut(s) 660
LmnI GCTCC 2 cut(s) 63, 218
Lsp1109I GCAGC 4 cut(s) 15, 160, 393, 463
MalI GATC 2 cut(s) 175, 536
MboI GATC 2 cut(s) 173, 534
MboII GAAGA 5 cut(s) 520, 523, 532, 572, 647
MflI RGATCY 1 cut(s) 173
MhlI GDGCHC 2 cut(s) 120, 355
MluCI AATT 2 cut(s) 238, 555
Mly113I GGCGCC 1 cut(s) 458
MmeI TCCRAC 2 cut(s) 151, 153
MroNI GCCGGC 1 cut(s) 454
MspA1I CMGCKG 3 cut(s) 28, 284, 299
MspI CCGG 5 cut(s) 14, 416, 455, 582, 598
MspR9I CCNGG 2 cut(s) 583, 598
MvnI CGCG 5 cut(s) 168, 185, 187, 284, 299
NaeI GCCGGC 1 cut(s) 456
NarI GGCGCC 1 cut(s) 458
NciI CCSGG 2 cut(s) 583, 598
NdeII GATC 2 cut(s) 173, 534
NgoMIV GCCGGC 1 cut(s) 454
NlaIII CATG 3 cut(s) 413, 505, 580
NlaIV GGNNCC 4 cut(s) 175, 423, 459, 586
NmeAIII GCCGAG 2 cut(s) 139, 369
NotI GCGGCCGC 1 cut(s) 285
NspV TTCGAA 1 cut(s) 371
PagI TCATGA 1 cut(s) 576
PauI GCGCGC 1 cut(s) 185
PciSI GCTCTTC 1 cut(s) 660
PcsI WCGNNNNNNNCGW 1 cut(s) 165
PdiI GCCGGC 1 cut(s) 456
PfeI GAWTC 2 cut(s) 134, 334
PflFI GACNNNGTC 1 cut(s) 583
PluTI GGCGCC 1 cut(s) 461
PspN4I GGNNCC 4 cut(s) 175, 423, 459, 586
PspPI GGNCC 5 cut(s) 422, 494, 585, 603, 615
PsuI RGATCY 1 cut(s) 173
PsyI GACNNNGTC 1 cut(s) 583
PteI GCGCGC 1 cut(s) 185
SacII CCGCGG 2 cut(s) 285, 300
SapI GCTCTTC 1 cut(s) 660
Sau3AI GATC 2 cut(s) 173, 534
Sau96I GGNCC 5 cut(s) 422, 494, 585, 603, 615
ScrFI CCNGG 2 cut(s) 583, 598
SduI GDGCHC 2 cut(s) 120, 355
SetI ASST 6 cut(s) 225, 233, 321, 408, 496, 639
SfoI GGCGCC 1 cut(s) 459
Sfr303I CCGCGG 2 cut(s) 285, 300
SfuI TTCGAA 1 cut(s) 371
SgrAI CRCCGGYG 1 cut(s) 13
SgrBI CCGCGG 2 cut(s) 285, 300
SinI GGWCC 3 cut(s) 422, 494, 585
Sse9I AATT 2 cut(s) 238, 555
SspDI GGCGCC 1 cut(s) 457
StyD4I CCNGG 2 cut(s) 581, 596
TaaI ACNGT 2 cut(s) 126, 275
TaqI TCGA 3 cut(s) 371, 467, 639
TasI AATT 2 cut(s) 238, 555
TfiI GAWTC 2 cut(s) 134, 334
TseI GCWGC 4 cut(s) 28, 148, 406, 451
TspDTI ATGAA 4 cut(s) 426, 562, 567, 658
Tth111I GACNNNGTC 1 cut(s) 583
VpaK11BI GGWCC 3 cut(s) 422, 494, 585
XapI RAATTY 1 cut(s) 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.