Domain of unknown function (DUF4408)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G50610 AT5G50710 |
| fragaria_vesca | FvH4_4g23360 FvH4_5g08680 |
| malus_domestica | MD06G1137900.v1.1 MD14G1153300.v1.1 MD16G1123500.v1.1 |
| prunus_persica | Prupe.1G222200_v2.0.a1 Prupe.5G148200_v2.0.a1 |
| pyrus_communis | pycom06g12910 pycom13g10690 |
| rosa_chinensis | RchiOBHm_Chr4g0429751 RchiOBHm_Chr7g0189701 |
| rosa_laevigata | RLG00000004596 RLG00000007046 |
| rosa_multiflora | Rmu_sc0001924.1_g000018 Rmu_sc0001935.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00265250 Rroxscaffold_5G00371520 |
| rosa_samantha | Rh4AG294100 Rh4BG300100 Rh4CG315800 Rh4DG297300 Rh7AG104400 Rh7BG106900 Rh7CG109000 Rh7DG107400 |
| rosa_wichuraiana | Rw4G025450 Rw7G009030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 330 |
| AclWI | GGATC | 1 cut(s) | 12 |
| AcuI | CTGAAG | 2 cut(s) | 326, 434 |
| AfaI | GTAC | 1 cut(s) | 388 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 367 |
| AgsI | TTSAA | 5 cut(s) | 22, 28, 70, 553, 605 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 178, 206, 210, 238 |
| AluBI | AGCT | 5 cut(s) | 210, 348, 440, 563, 613 |
| AluI | AGCT | 5 cut(s) | 210, 348, 440, 563, 613 |
| Alw21I | GWGCWC | 2 cut(s) | 212, 350 |
| Alw26I | GTCTC | 1 cut(s) | 289 |
| AlwI | GGATC | 1 cut(s) | 12 |
| AoxI | GGCC | 1 cut(s) | 162 |
| ApeKI | GCWGC | 1 cut(s) | 409 |
| AsuHPI | GGTGA | 3 cut(s) | 50, 496, 502 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BanI | GGYRCC | 1 cut(s) | 330 |
| BanII | GRGCYC | 2 cut(s) | 212, 350 |
| Bbv12I | GWGCWC | 2 cut(s) | 212, 350 |
| BbvI | GCAGC | 1 cut(s) | 396 |
| BccI | CCATC | 2 cut(s) | 17, 450 |
| BclI | TGATCA | 1 cut(s) | 541 |
| BcoDI | GTCTC | 1 cut(s) | 289 |
| BfaI | CTAG | 2 cut(s) | 230, 614 |
| BfmI | CTRYAG | 1 cut(s) | 441 |
| BglII | AGATCT | 1 cut(s) | 15 |
| BisI | GCNGC | 1 cut(s) | 410 |
| BlsI | GCNGC | 1 cut(s) | 411 |
| BmcAI | AGTACT | 1 cut(s) | 388 |
| BmiI | GGNNCC | 3 cut(s) | 6, 332, 372 |
| BmsI | GCATC | 2 cut(s) | 64, 302 |
| BsaBI | GATNNNNATC | 1 cut(s) | 540 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 367 |
| Bse3DI | GCAATG | 1 cut(s) | 39 |
| Bse8I | GATNNNNATC | 1 cut(s) | 540 |
| BseGI | GGATG | 2 cut(s) | 461, 466 |
| BseJI | GATNNNNATC | 1 cut(s) | 540 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 367 |
| BseMI | GCAATG | 1 cut(s) | 39 |
| BseMII | CTCAG | 1 cut(s) | 374 |
| BseXI | GCAGC | 1 cut(s) | 396 |
| BshFI | GGCC | 1 cut(s) | 164 |
| BshNI | GGYRCC | 1 cut(s) | 330 |
| BsiHKAI | GWGCWC | 2 cut(s) | 212, 350 |
| BslFI | GGGAC | 1 cut(s) | 167 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 367 |
| BsmAI | GTCTC | 1 cut(s) | 289 |
| BsmFI | GGGAC | 1 cut(s) | 167 |
| BsnI | GGCC | 1 cut(s) | 164 |
| Bsp1286I | GDGCHC | 2 cut(s) | 212, 350 |
| Bsp143I | GATC | 3 cut(s) | 4, 15, 541 |
| BspANI | GGCC | 1 cut(s) | 164 |
| BspCNI | CTCAG | 1 cut(s) | 375 |
| BspLI | GGNNCC | 3 cut(s) | 6, 332, 372 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BspQI | GCTCTTC | 1 cut(s) | 355 |
| BspT107I | GGYRCC | 1 cut(s) | 330 |
| BsrDI | GCAATG | 1 cut(s) | 39 |
| BssMI | GATC | 3 cut(s) | 4, 15, 541 |
| Bst4CI | ACNGT | 3 cut(s) | 201, 283, 635 |
| Bst6I | CTCTTC | 4 cut(s) | 83, 292, 355, 410 |
| BstDEI | CTNAG | 1 cut(s) | 383 |
| BstF5I | GGATG | 2 cut(s) | 461, 466 |
| BstKTI | GATC | 3 cut(s) | 7, 18, 544 |
| BstMAI | GTCTC | 1 cut(s) | 289 |
| BstMBI | GATC | 3 cut(s) | 4, 15, 541 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 61 |
| BstSFI | CTRYAG | 1 cut(s) | 441 |
| BstV1I | GCAGC | 1 cut(s) | 396 |
| BstX2I | RGATCY | 2 cut(s) | 4, 15 |
| BstYI | RGATCY | 2 cut(s) | 4, 15 |
| BsuRI | GGCC | 1 cut(s) | 164 |
| BtsCI | GGATG | 2 cut(s) | 461, 466 |
| BtsIMutI | CAGTG | 3 cut(s) | 197, 585, 640 |
| Csp6I | GTAC | 1 cut(s) | 387 |
| CviAII | CATG | 2 cut(s) | 157, 322 |
| CviQI | GTAC | 1 cut(s) | 387 |
| DdeI | CTNAG | 1 cut(s) | 383 |
| DpnI | GATC | 3 cut(s) | 6, 17, 543 |
| DpnII | GATC | 3 cut(s) | 4, 15, 541 |
| Eam1104I | CTCTTC | 4 cut(s) | 83, 292, 355, 410 |
| EarI | CTCTTC | 4 cut(s) | 83, 292, 355, 410 |
| Ecl136II | GAGCTC | 2 cut(s) | 210, 348 |
| Eco147I | AGGCCT | 1 cut(s) | 164 |
| Eco24I | GRGCYC | 2 cut(s) | 212, 350 |
| Eco53kI | GAGCTC | 2 cut(s) | 210, 348 |
| Eco57I | CTGAAG | 2 cut(s) | 326, 434 |
| EcoICRI | GAGCTC | 2 cut(s) | 210, 348 |
| EcoT38I | GRGCYC | 2 cut(s) | 212, 350 |
| FaeI | CATG | 2 cut(s) | 160, 325 |
| FaiI | YATR | 9 cut(s) | 87, 133, 158, 227, 315, 323, 393, 443, 503 |
| FaqI | GGGAC | 1 cut(s) | 167 |
| FatI | CATG | 2 cut(s) | 156, 321 |
| FbaI | TGATCA | 1 cut(s) | 541 |
| Fnu4HI | GCNGC | 1 cut(s) | 410 |
| FokI | GGATG | 2 cut(s) | 468, 473 |
| FriOI | GRGCYC | 2 cut(s) | 212, 350 |
| Fsp4HI | GCNGC | 1 cut(s) | 410 |
| FspBI | CTAG | 2 cut(s) | 230, 614 |
| GluI | GCNGC | 1 cut(s) | 410 |
| HaeIII | GGCC | 1 cut(s) | 164 |
| Hin1II | CATG | 2 cut(s) | 160, 325 |
| HincII | GTYRAC | 1 cut(s) | 307 |
| HindII | GTYRAC | 1 cut(s) | 307 |
| HinfI | GANTC | 2 cut(s) | 263, 379 |
| HphI | GGTGA | 3 cut(s) | 50, 496, 502 |
| Hpy166II | GTNNAC | 2 cut(s) | 197, 307 |
| Hpy188I | TCNGA | 3 cut(s) | 345, 384, 546 |
| Hpy188III | TCNNGA | 2 cut(s) | 13, 19 |
| Hpy8I | GTNNAC | 2 cut(s) | 197, 307 |
| HpyAV | CCTTC | 5 cut(s) | 154, 350, 440, 481, 588 |
| HpyCH4III | ACNGT | 3 cut(s) | 201, 283, 635 |
| HpyCH4V | TGCA | 5 cut(s) | 37, 108, 293, 578, 630 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 61 |
| HpyF3I | CTNAG | 1 cut(s) | 383 |
| Hsp92II | CATG | 2 cut(s) | 160, 325 |
| Ksp22I | TGATCA | 1 cut(s) | 541 |
| Kzo9I | GATC | 3 cut(s) | 4, 15, 541 |
| LguI | GCTCTTC | 1 cut(s) | 355 |
| LmnI | GCTCC | 2 cut(s) | 215, 610 |
| LpnPI | CCDG | 1 cut(s) | 74 |
| Lsp1109I | GCAGC | 1 cut(s) | 396 |
| LweI | GCATC | 2 cut(s) | 64, 302 |
| MaeI | CTAG | 2 cut(s) | 230, 614 |
| MaeIII | GTNAC | 1 cut(s) | 583 |
| MalI | GATC | 3 cut(s) | 6, 17, 543 |
| MboI | GATC | 3 cut(s) | 4, 15, 541 |
| MflI | RGATCY | 2 cut(s) | 4, 15 |
| MhlI | GDGCHC | 2 cut(s) | 212, 350 |
| MluCI | AATT | 2 cut(s) | 548, 605 |
| MmeI | TCCRAC | 1 cut(s) | 238 |
| MnlI | CCTC | 5 cut(s) | 45, 151, 411, 466, 490 |
| MseI | TTAA | 2 cut(s) | 101, 146 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 61 |
| NdeII | GATC | 3 cut(s) | 4, 15, 541 |
| NlaIII | CATG | 2 cut(s) | 160, 325 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 332, 372 |
| NmuCI | GTSAC | 1 cut(s) | 583 |
| PceI | AGGCCT | 1 cut(s) | 164 |
| PciSI | GCTCTTC | 1 cut(s) | 355 |
| PfeI | GAWTC | 2 cut(s) | 263, 379 |
| PkrI | GCNGC | 1 cut(s) | 411 |
| Psp124BI | GAGCTC | 2 cut(s) | 212, 350 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 332, 372 |
| PsuI | RGATCY | 2 cut(s) | 4, 15 |
| RsaI | GTAC | 1 cut(s) | 388 |
| RsaNI | GTAC | 1 cut(s) | 387 |
| SacI | GAGCTC | 2 cut(s) | 212, 350 |
| SapI | GCTCTTC | 1 cut(s) | 355 |
| SaqAI | TTAA | 2 cut(s) | 101, 146 |
| SatI | GCNGC | 1 cut(s) | 410 |
| Sau3AI | GATC | 3 cut(s) | 4, 15, 541 |
| ScaI | AGTACT | 1 cut(s) | 388 |
| SduI | GDGCHC | 2 cut(s) | 212, 350 |
| SetI | ASST | 8 cut(s) | 212, 332, 350, 408, 442, 492, 565, 615 |
| SfaNI | GCATC | 2 cut(s) | 64, 302 |
| SfcI | CTRYAG | 1 cut(s) | 441 |
| Sse9I | AATT | 2 cut(s) | 548, 605 |
| SseBI | AGGCCT | 1 cut(s) | 164 |
| SspI | AATATT | 1 cut(s) | 301 |
| SspMI | CTAG | 2 cut(s) | 230, 614 |
| SstI | GAGCTC | 2 cut(s) | 212, 350 |
| StuI | AGGCCT | 1 cut(s) | 164 |
| TaaI | ACNGT | 3 cut(s) | 201, 283, 635 |
| TasI | AATT | 2 cut(s) | 548, 605 |
| TatI | WGTACW | 1 cut(s) | 386 |
| TfiI | GAWTC | 2 cut(s) | 263, 379 |
| Tru1I | TTAA | 2 cut(s) | 101, 146 |
| Tru9I | TTAA | 2 cut(s) | 101, 146 |
| TscAI | CASTG | 3 cut(s) | 204, 592, 640 |
| TseFI | GTSAC | 1 cut(s) | 583 |
| TseI | GCWGC | 1 cut(s) | 409 |
| Tsp45I | GTSAC | 1 cut(s) | 583 |
| TspDTI | ATGAA | 9 cut(s) | 173, 214, 330, 338, 447, 477, 522, 528, 534 |
| TspRI | CASTG | 3 cut(s) | 204, 592, 640 |
| XspI | CTAG | 2 cut(s) | 230, 614 |
| ZrmI | AGTACT | 1 cut(s) | 388 |