Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0005865

Physical Location & Seq

Genomic Coordinates Forward (+)

2952817 .. 2955446

Gene Structure 2630 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G039200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGCAACACCAAGCTCTCCCTCATCCCCCTCCCCCTCCCATGGCTTCCTCTGTCAAGGGTAACAGCAGACTCTCCATTGCCATGGAGCGCACTGGCCAGTGGATTTTTTCTCAAGAAATCCCTTCGGATGTTATGGTTGAAGTTGGAGAAGCCAATTTCTCTCTACACAAGTTCATGCTTGTGGCGAAGAGCAACCACATAAGGAAGCTCGTTTTAGAGTCAACAGAGCCAGACCTGACGAGAATCAACCTCTCCGACATTCCGGGAGGCCCCGAGACGTTCGAGAAGGCGGCCAAGTTCTGTTACGGCGTCAACTTCGAAATCACAGTCCAAAACGTCGCCGCTTTGCGCTGCGCCGCAGAGTACCTGGAAATGACCGATAAGTACTGCGACAACAACCTCACTGGCCGCACAGAAGATTTCTTGACGCAGGTCGCTCTGTCAAGCCTCTCCGGTGCCATTGTCGTGCTCAAGTCGTGCGAAGAGCTTCTCCCCATCTCCGAGGACCTCAAGATCGTTCAGAGATGCGTGGATGTTGCTACTTCCAAGGCCTCAATTGAAGCGAGTTTTCCAAGTCGAACGCCAACGAATTGGTGGACAGAGGAATTGGCGATTTTGGACATTGAATTCTTCGGCAGATTCATCACTGCGATGAAGCTGCGCGGAGCGAAATCGTTAATCGTAGCCAGCGCGATCATAACGTACGCCGAGAAATGGCTCCGAGATCTCGTCCGAGACCACTCCGGTACCGGCGCAAACTCGGCCTTTTCGGACGACTCCGATCTCCGAATCCGGCAACGCGAGCTTCTGGAAGCGATCGTTTCTCTCTTGCCGTCCGAGAAAGCGGCGCTGCCGATAAACTTCCTCTGCTGCCTTCTCAGATCTGCGACCTTCGTCAAGGCCTCGAGCGCGTGCAAGACCGAGCTGGAGAAGCGGATCTCGGTGATATTGGAGCACGTGACCGTGGACGACCTCCTGGTGCTGTCGTTCACTTACGACGGCGAGAGGCTCTTCGATCTCGAGAGCGTGAGGAAGATCATCTCCGGGTTCGTGGAGAAGGAGAAGAGCGTCGCTGTCTTCAACGCCGGCGATTTCAGAGAGGTTTGCTCGGCGGCCATGGTCAGAGTCGCGAAGACTGTCGACGCGTATCTCGGCGAGATCGCCCCGTGTGTTGATCTCAGCATCTCCAAGTTCAACGGCATCGCCAACCTCGTCCCTAAAGGCGCCCGTAAAGTGGACGACGATCTCTATCGCGCTGTTGATATTTACTTGAAGGCTCATCCGAACCTTGACGAGATAGAGAGGGAGAAGGTGTGCAGTGTAATGGACGCCTTGAAGTTGTCGTACGAAGCGAGAGTGCACGCTTCGCAGAACAAACGACTTCCCGTGCAAATCGTACTGCATGCGTTGTATTACGATCAGCTGAAGCTGAGGAGCGGGGTGGACGAAAACGACATGATGCAGGACGCCGTAACGACGAGGAGTCAGGTGCAGCAGGACGTGTCGTTGGCGAGGGAGAACGAGTCGTTGAGAACGGAGCTGTTGAGGATGAAGATGTACATTACGGACTTGCAGAAAAGTGGGCCTGCTGCAAAAGGTAGTTTAGGCTCCGCGACGACGTCGTCTGGGAAAGGAGGTGGTGGGCCCAGGAAGGGCACGTTCTTTTCGTCGGTGTCGAAGAAATTGGGGAAGTTGAATCCGTTTAAGCAAGGGTCCAAGGACACATCGAATATTATGGATGAGGGTGTGGACATTACCAAGCCTAGAAGGAGAAGGTTTTCAATCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

597

Amino Acids

65.97

Weight (kDa)

6.78

Isoelectric Point (pI)

35.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005865)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30520 AT2G30520 AT2G30520
fragaria_vesca	FvH4_3g40860 FvH4_3g40860 FvH4_3g40860 FvH4_3g40860
malus_domestica	MD03G1048900.v1.1 MD11G1051400.v1.1
prunus_persica	Prupe.6G039200_v2.0.a1 Prupe.6G039200_v2.0.a1
pyrus_communis	pycom03g03840 pycom11g04120
rosa_chinensis	RchiOBHm_Chr5g0073591
rosa_laevigata	RLG00000036398
rosa_multiflora	Rmu_co8263269.1_g000001 Rmu_co8430755.1_g000001 Rmu_sc0042142.1_g000002 Rmu_ssc0000242.1_g000005
rosa_roxburghii	Rroxscaffold_1G00007670
rosa_rugosa	Rorug05G0425200 Rorug05G0425300 Rorug05G0425400
rosa_samantha	Rh5AG482200 Rh5BG503000 Rh5CG526100 Rh5DG515200
rosa_wichuraiana	Rw5G044800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1621
AatII	GACGTC	1 cut(s)	1622
Acc36I	ACCTGC	1 cut(s)	421
Acc65I	GGTACC	1 cut(s)	746
AccB1I	GGYRCC	3 cut(s)	455, 746, 1223
AccBSI	CCGCTC	1 cut(s)	1437
AccI	GTMKAC	1 cut(s)	1140
AccII	CGCG	8 cut(s)	663, 692, 801, 911, 1130, 1145, 1254, 1613
AclWI	GGATC	1 cut(s)	944
AcoI	YGGCCR	4 cut(s)	94, 291, 406, 1113
AcsI	RAATTY	1 cut(s)	626
AcuI	CTGAAG	1 cut(s)	1445
AcvI	CACGTG	1 cut(s)	958
AcyI	GRCGYC	5 cut(s)	309, 1224, 1329, 1467, 1619
AfaI	GTAC	7 cut(s)	365, 386, 704, 748, 1346, 1398, 1559
AfiI	CCNNNNNNNGG	4 cut(s)	40, 714, 1234, 1652
AflIII	ACRYGT	2 cut(s)	1143, 1500
AgsI	TTSAA	9 cut(s)	140, 560, 626, 1081, 1195, 1273, 1336, 1696, 1782
AhdI	GACNNNNNGTC	1 cut(s)	1482
AjiI	CACGTC	1 cut(s)	1501
AjnI	CCWGG	3 cut(s)	366, 975, 1646
AluBI	AGCT	9 cut(s)	14, 208, 487, 658, 805, 925, 1423, 1429, 1540
AluI	AGCT	9 cut(s)	14, 208, 487, 658, 805, 925, 1423, 1429, 1540
Alw21I	GWGCWC	3 cut(s)	471, 957, 1362
Alw26I	GTCTC	2 cut(s)	269, 729
Alw44I	GTGCAC	1 cut(s)	1358
AlwI	GGATC	1 cut(s)	944
Ama87I	CYCGRG	3 cut(s)	272, 904, 1019
ApaI	GGGCCC	1 cut(s)	1647
ApaLI	GTGCAC	1 cut(s)	1358
ApeKI	GCWGC	6 cut(s)	351, 658, 850, 870, 1492, 1589
ApoI	RAATTY	1 cut(s)	626
ArsI	GACNNNNNNTTYG	2 cut(s)	312, 344
Asp700I	GAANNNNTTC	2 cut(s)	486, 1777
Asp718I	GGTACC	1 cut(s)	746
AspS9I	GGNCC	6 cut(s)	269, 505, 1583, 1643, 1644, 1713
AsuC2I	CCSGG	2 cut(s)	264, 1045
AsuHPI	GGTGA	1 cut(s)	955
AsuII	TTCGAA	1 cut(s)	318
AvaI	CYCGRG	3 cut(s)	272, 904, 1019
AvaII	GGWCC	2 cut(s)	505, 1713
BaeGI	GKGCMC	3 cut(s)	1362, 1647, 1658
BaeI	ACNNNNGTAYC	2 cut(s)	730, 763
BalI	TGGCCA	1 cut(s)	96
BanI	GGYRCC	3 cut(s)	455, 746, 1223
BanII	GRGCYC	1 cut(s)	1647
BarI	GAAGNNNNNNTAC	2 cut(s)	1328, 1360
BbrPI	CACGTG	1 cut(s)	958
BbsI	GAAGAC	2 cut(s)	1069, 1139
Bbv12I	GWGCWC	3 cut(s)	471, 957, 1362
BbvCI	CCTCAGC	1 cut(s)	1430
BbvI	GCAGC	6 cut(s)	338, 645, 837, 857, 1504, 1576
BccI	CCATC	1 cut(s)	503
BceAI	ACGGC	5 cut(s)	322, 817, 1015, 1213, 1454
BcgI	CGANNNNNNTGC	2 cut(s)	640, 674
BciT130I	CCWGG	3 cut(s)	368, 977, 1648
BcnI	CCSGG	2 cut(s)	264, 1045
BcoDI	GTCTC	2 cut(s)	269, 729
BfaI	CTAG	1 cut(s)	1764
BfoI	RGCGCY	2 cut(s)	851, 1227
BfuAI	ACCTGC	1 cut(s)	421
BglII	AGATCT	2 cut(s)	724, 881
BmcAI	AGTACT	1 cut(s)	386
Bme1390I	CCNGG	5 cut(s)	264, 368, 977, 1045, 1648
Bme18I	GGWCC	2 cut(s)	505, 1713
BmeRI	GACNNNNNGTC	1 cut(s)	1482
BmeT110I	CYCGRG	3 cut(s)	272, 904, 1019
BmgBI	CACGTC	1 cut(s)	1501
BmgT120I	GGNCC	6 cut(s)	269, 505, 1583, 1643, 1644, 1713
BmiI	GGNNCC	8 cut(s)	271, 457, 719, 748, 1225, 1609, 1645, 1714
BmrFI	CCNGG	5 cut(s)	264, 368, 977, 1045, 1648
BmsI	GCATC	4 cut(s)	515, 1191, 1209, 1449
BoxI	GACNNNNGTC	2 cut(s)	431, 893
BpiI	GAAGAC	2 cut(s)	1069, 1139
BplI	GAGNNNNNCTC	2 cut(s)	1091, 1123
BpmI	CTGGAG	1 cut(s)	947
Bpu10I	CCTNAGC	1 cut(s)	1430
Bpu14I	TTCGAA	1 cut(s)	318
BpuEI	CTTGAG	3 cut(s)	96, 455, 494
BpuMI	CCSGG	2 cut(s)	264, 1045
BsaAI	YACGTR	1 cut(s)	958
BsaBI	GATNNNNATC	1 cut(s)	1248
BsaHI	GRCGYC	5 cut(s)	309, 1224, 1329, 1467, 1619
BsaI	GGTCTC	1 cut(s)	729
BsaJI	CCNNGG	8 cut(s)	39, 81, 501, 546, 963, 1116, 1646, 1716
BsaWI	WCCGGW	2 cut(s)	452, 743
BsaXI	ACNNNNNCTCC	4 cut(s)	1298, 1328, 1508, 1538
Bsc4I	CCNNNNNNNGG	4 cut(s)	40, 714, 1234, 1652
Bse118I	RCCGGY	2 cut(s)	749, 1085
Bse1I	ACTGG	3 cut(s)	97, 97, 409
Bse3DI	GCAATG	1 cut(s)	75
Bse8I	GATNNNNATC	1 cut(s)	1248
BseBI	CCWGG	3 cut(s)	368, 977, 1648
BseDI	CCNNGG	8 cut(s)	39, 81, 501, 546, 963, 1116, 1646, 1716
BseGI	GGATG	6 cut(s)	22, 133, 538, 1279, 1554, 1744
BseJI	GATNNNNATC	1 cut(s)	1248
BseLI	CCNNNNNNNGG	4 cut(s)	40, 714, 1234, 1652
BseMI	GCAATG	1 cut(s)	75
BseMII	CTCAG	3 cut(s)	892, 1192, 1421
BseNI	ACTGG	3 cut(s)	97, 97, 409
BseRI	GAGGAG	2 cut(s)	1447, 1495
BseSI	GKGCMC	3 cut(s)	1362, 1647, 1658
BseXI	GCAGC	6 cut(s)	338, 645, 837, 857, 1504, 1576
BsgI	GTGCAG	2 cut(s)	1336, 1511
Bsh1236I	CGCG	8 cut(s)	663, 692, 801, 911, 1130, 1145, 1254, 1613
Bsh1285I	CGRYCG	1 cut(s)	819
BshNI	GGYRCC	3 cut(s)	455, 746, 1223
BsiEI	CGRYCG	1 cut(s)	819
BsiHKAI	GWGCWC	3 cut(s)	471, 957, 1362
BsiHKCI	CYCGRG	3 cut(s)	272, 904, 1019
BsiSI	CCGG	7 cut(s)	263, 453, 744, 750, 793, 1044, 1086
BsiWI	CGTACG	2 cut(s)	702, 1344
BslFI	GGGAC	1 cut(s)	1199
BslI	CCNNNNNNNGG	4 cut(s)	40, 714, 1234, 1652
BsmAI	GTCTC	2 cut(s)	269, 729
BsmBI	CGTCTC	1 cut(s)	269
BsmFI	GGGAC	1 cut(s)	1199
Bso31I	GGTCTC	1 cut(s)	729
BsoBI	CYCGRG	3 cut(s)	272, 904, 1019
Bsp119I	TTCGAA	1 cut(s)	318
Bsp120I	GGGCCC	1 cut(s)	1643
Bsp1286I	GDGCHC	5 cut(s)	471, 957, 1362, 1647, 1658
Bsp1407I	TGTACA	1 cut(s)	1557
Bsp19I	CCATGG	3 cut(s)	39, 81, 1116
Bsp68I	TCGCGA	1 cut(s)	1130
BspCNI	CTCAG	3 cut(s)	891, 1191, 1422
BspFNI	CGCG	8 cut(s)	663, 692, 801, 911, 1130, 1145, 1254, 1613
BspLI	GGNNCC	8 cut(s)	271, 457, 719, 748, 1225, 1609, 1645, 1714
BspMI	ACCTGC	1 cut(s)	421
BspPI	GGATC	1 cut(s)	944
BspQI	GCTCTTC	4 cut(s)	182, 477, 1016, 1058
BspT104I	TTCGAA	1 cut(s)	318
BspT107I	GGYRCC	3 cut(s)	455, 746, 1223
BspTNI	GGTCTC	1 cut(s)	729
BsrBI	CCGCTC	1 cut(s)	1437
BsrDI	GCAATG	1 cut(s)	75
BsrFI	RCCGGY	2 cut(s)	749, 1085
BsrGI	TGTACA	1 cut(s)	1557
BsrI	ACTGG	3 cut(s)	97, 97, 409
BssAI	RCCGGY	2 cut(s)	749, 1085
BssECI	CCNNGG	8 cut(s)	39, 81, 501, 546, 963, 1116, 1646, 1716
BssNI	GRCGYC	5 cut(s)	309, 1224, 1329, 1467, 1619
BssT1I	CCWWGG	5 cut(s)	39, 81, 546, 1116, 1716
Bst2UI	CCWGG	3 cut(s)	368, 977, 1648
Bst4CI	ACNGT	3 cut(s)	328, 964, 1138
Bst6I	CTCTTC	4 cut(s)	182, 477, 1016, 1058
BstACI	GRCGYC	5 cut(s)	309, 1224, 1329, 1467, 1619
BstAUI	TGTACA	1 cut(s)	1557
BstBAI	YACGTR	1 cut(s)	958
BstBI	TTCGAA	1 cut(s)	318
BstC8I	GCNNGC	7 cut(s)	688, 803, 913, 1087, 1362, 1404, 1587
BstDEI	CTNAG	3 cut(s)	878, 1178, 1430
BstDSI	CCRYGG	4 cut(s)	39, 81, 963, 1116
BstF5I	GGATG	6 cut(s)	22, 133, 538, 1279, 1554, 1744
BstFNI	CGCG	8 cut(s)	663, 692, 801, 911, 1130, 1145, 1254, 1613
BstH2I	RGCGCY	2 cut(s)	851, 1227
BstMAI	GTCTC	2 cut(s)	269, 729
BstMCI	CGRYCG	1 cut(s)	819
BstMWI	GCNNNNNNNGC	5 cut(s)	761, 802, 908, 931, 1366
BstNI	CCWGG	3 cut(s)	368, 977, 1648
BstNSI	RCATGY	1 cut(s)	1406
BstPAI	GACNNNNGTC	2 cut(s)	431, 893
BstSCI	CCNGG	5 cut(s)	262, 366, 975, 1043, 1646
BstSLI	GKGCMC	3 cut(s)	1362, 1647, 1658
BstUI	CGCG	8 cut(s)	663, 692, 801, 911, 1130, 1145, 1254, 1613
BstV1I	GCAGC	6 cut(s)	338, 645, 837, 857, 1504, 1576
BstV2I	GAAGAC	2 cut(s)	1069, 1139
BstX2I	RGATCY	3 cut(s)	724, 881, 936
BstXI	CCANNNNNNTGG	2 cut(s)	82, 591
BstYI	RGATCY	3 cut(s)	724, 881, 936
BtgI	CCRYGG	4 cut(s)	39, 81, 963, 1116
BtgZI	GCGATG	2 cut(s)	665, 1186
BtrI	CACGTC	1 cut(s)	1501
BtsCI	GGATG	6 cut(s)	22, 133, 538, 1279, 1554, 1744
BtsI	GCAGTG	2 cut(s)	645, 1324
BtsIMutI	CAGTG	5 cut(s)	90, 104, 402, 645, 1324
BtuMI	TCGCGA	1 cut(s)	1130
BveI	ACCTGC	1 cut(s)	421
Cac8I	GCNNGC	7 cut(s)	688, 803, 913, 1087, 1362, 1404, 1587
Cfr10I	RCCGGY	2 cut(s)	749, 1085
Cfr13I	GGNCC	6 cut(s)	269, 505, 1583, 1643, 1644, 1713
CseI	GACGC	6 cut(s)	298, 436, 1057, 1151, 1337, 1475
Csp6I	GTAC	7 cut(s)	364, 385, 703, 747, 1345, 1397, 1558
CviAII	CATG	6 cut(s)	40, 82, 175, 1117, 1403, 1456
CviQI	GTAC	7 cut(s)	364, 385, 703, 747, 1345, 1397, 1558
DdeI	CTNAG	3 cut(s)	878, 1178, 1430
DinI	GGCGCC	1 cut(s)	1225
DrdI	GACNNNNNNGTC	1 cut(s)	1621
DriI	GACNNNNNGTC	1 cut(s)	1482
DseDI	GACNNNNNNGTC	1 cut(s)	1621
EaeI	YGGCCR	4 cut(s)	94, 291, 406, 1113
Eam1104I	CTCTTC	4 cut(s)	182, 477, 1016, 1058
Eam1105I	GACNNNNNGTC	1 cut(s)	1482
EarI	CTCTTC	4 cut(s)	182, 477, 1016, 1058
Eco130I	CCWWGG	5 cut(s)	39, 81, 546, 1116, 1716
Eco147I	AGGCCT	2 cut(s)	551, 902
Eco24I	GRGCYC	1 cut(s)	1647
Eco31I	GGTCTC	1 cut(s)	729
Eco47I	GGWCC	2 cut(s)	505, 1713
Eco57I	CTGAAG	1 cut(s)	1445
Eco72I	CACGTG	1 cut(s)	958
Eco88I	CYCGRG	3 cut(s)	272, 904, 1019
EcoO109I	RGGNCCY	2 cut(s)	269, 505
EcoRI	GAATTC	1 cut(s)	626
EcoRII	CCWGG	3 cut(s)	366, 975, 1646
EcoT14I	CCWWGG	5 cut(s)	39, 81, 546, 1116, 1716
EcoT38I	GRGCYC	1 cut(s)	1647
EgeI	GGCGCC	1 cut(s)	1225
EheI	GGCGCC	1 cut(s)	1225
ErhI	CCWWGG	5 cut(s)	39, 81, 546, 1116, 1716
Esp3I	CGTCTC	1 cut(s)	269
FaeI	CATG	6 cut(s)	43, 85, 178, 1120, 1406, 1459
FaqI	GGGAC	1 cut(s)	1199
FatI	CATG	6 cut(s)	39, 81, 174, 1116, 1402, 1455
FauI	CCCGC	1 cut(s)	1430
FblI	GTMKAC	1 cut(s)	1140
FokI	GGATG	6 cut(s)	9, 140, 545, 1266, 1561, 1751
FriOI	GRGCYC	1 cut(s)	1647
FspBI	CTAG	1 cut(s)	1764
GsuI	CTGGAG	1 cut(s)	947
HaeII	RGCGCY	2 cut(s)	851, 1227
HapII	CCGG	7 cut(s)	263, 453, 744, 750, 793, 1044, 1086
HgaI	GACGC	6 cut(s)	298, 436, 1057, 1151, 1337, 1475
Hin1I	GRCGYC	5 cut(s)	309, 1224, 1329, 1467, 1619
Hin1II	CATG	6 cut(s)	43, 85, 178, 1120, 1406, 1459
HincII	GTYRAC	3 cut(s)	222, 313, 1141
HindII	GTYRAC	3 cut(s)	222, 313, 1141
HpaII	CCGG	7 cut(s)	263, 453, 744, 750, 793, 1044, 1086
HphI	GGTGA	1 cut(s)	955
Hpy188III	TCNNGA	8 cut(s)	113, 283, 424, 511, 809, 1019, 1021, 1129
HpyCH4III	ACNGT	3 cut(s)	328, 964, 1138
HpyCH4IV	ACGT	7 cut(s)	278, 336, 701, 957, 1500, 1619, 1658
HpyF10VI	GCNNNNNNNGC	5 cut(s)	761, 802, 908, 931, 1366
HpyF3I	CTNAG	3 cut(s)	878, 1178, 1430
HpySE526I	ACGT	7 cut(s)	278, 336, 701, 957, 1500, 1619, 1658
Hsp92I	GRCGYC	5 cut(s)	309, 1224, 1329, 1467, 1619
Hsp92II	CATG	6 cut(s)	43, 85, 178, 1120, 1406, 1459
KasI	GGCGCC	1 cut(s)	1223
KpnI	GGTACC	1 cut(s)	750
KroI	GCCGGC	1 cut(s)	1085
KroNI	GCCGGC	1 cut(s)	1087
LguI	GCTCTTC	4 cut(s)	182, 477, 1016, 1058
LmnI	GCTCC	7 cut(s)	85, 665, 723, 952, 1434, 1537, 1613
Lsp1109I	GCAGC	6 cut(s)	338, 645, 837, 857, 1504, 1576
LweI	GCATC	4 cut(s)	515, 1191, 1209, 1449
MaeI	CTAG	1 cut(s)	1764
MaeII	ACGT	7 cut(s)	278, 336, 701, 957, 1500, 1619, 1658
MaeIII	GTNAC	4 cut(s)	59, 302, 958, 1471
MbiI	CCGCTC	1 cut(s)	1437
MfeI	CAATTG	1 cut(s)	555
MflI	RGATCY	3 cut(s)	724, 881, 936
MhlI	GDGCHC	5 cut(s)	471, 957, 1362, 1647, 1658
MlsI	TGGCCA	1 cut(s)	96
MluCI	AATT	6 cut(s)	154, 555, 589, 605, 626, 1682
MluI	ACGCGT	1 cut(s)	1143
MluNI	TGGCCA	1 cut(s)	96
Mly113I	GGCGCC	1 cut(s)	1224
MlyI	GAGTC	6 cut(s)	63, 227, 770, 1134, 1492, 1532
MmeI	TCCRAC	2 cut(s)	124, 279
Mox20I	TGGCCA	1 cut(s)	96
MreI	CGCCGGCG	1 cut(s)	1085
MroNI	GCCGGC	1 cut(s)	1085
MroXI	GAANNNNTTC	2 cut(s)	486, 1777
MscI	TGGCCA	1 cut(s)	96
MseI	TTAA	3 cut(s)	677, 1704, 1789
MslI	CAYNNNNRTG	4 cut(s)	80, 179, 464, 650
Msp20I	TGGCCA	1 cut(s)	96
MspA1I	CMGCKG	1 cut(s)	1423
MspI	CCGG	7 cut(s)	263, 453, 744, 750, 793, 1044, 1086
MspR9I	CCNGG	5 cut(s)	264, 368, 977, 1045, 1648
MteI	GCGCNGCGC	1 cut(s)	352
MunI	CAATTG	1 cut(s)	555
MvaI	CCWGG	3 cut(s)	368, 977, 1648
MvnI	CGCG	8 cut(s)	663, 692, 801, 911, 1130, 1145, 1254, 1613
MwoI	GCNNNNNNNGC	5 cut(s)	761, 802, 908, 931, 1366
NaeI	GCCGGC	1 cut(s)	1087
NarI	GGCGCC	1 cut(s)	1224
NciI	CCSGG	2 cut(s)	264, 1045
NcoI	CCATGG	3 cut(s)	39, 81, 1116
NgoMIV	GCCGGC	1 cut(s)	1085
NlaIII	CATG	6 cut(s)	43, 85, 178, 1120, 1406, 1459
NlaIV	GGNNCC	8 cut(s)	271, 457, 719, 748, 1225, 1609, 1645, 1714
NmeAIII	GCCGAG	4 cut(s)	733, 740, 1088, 1131
NmuCI	GTSAC	1 cut(s)	958
NruI	TCGCGA	1 cut(s)	1130
NspI	RCATGY	1 cut(s)	1406
NspV	TTCGAA	1 cut(s)	318
PaeI	GCATGC	1 cut(s)	1406
PaeR7I	CTCGAG	2 cut(s)	904, 1019
PceI	AGGCCT	2 cut(s)	551, 902
PciSI	GCTCTTC	4 cut(s)	182, 477, 1016, 1058
PcsI	WCGNNNNNNNCGW	4 cut(s)	1209, 1349, 1664, 1673
PdiI	GCCGGC	1 cut(s)	1087
PdmI	GAANNNNTTC	2 cut(s)	486, 1777
PfeI	GAWTC	4 cut(s)	243, 639, 789, 1696
Pfl23II	CGTACG	2 cut(s)	702, 1344
PflFI	GACNNNGTC	2 cut(s)	1618, 1621
PfoI	TCCNGGA	1 cut(s)	262
Ple19I	CGATCG	1 cut(s)	819
PleI	GAGTC	6 cut(s)	63, 226, 770, 1133, 1491, 1531
PluTI	GGCGCC	1 cut(s)	1227
PmaCI	CACGTG	1 cut(s)	958
PmlI	CACGTG	1 cut(s)	958
PpsI	GAGTC	6 cut(s)	63, 226, 770, 1133, 1491, 1531
Ppu21I	YACGTR	1 cut(s)	958
PpuMI	RGGWCCY	1 cut(s)	505
PshAI	GACNNNNGTC	2 cut(s)	431, 893
Psp5II	RGGWCCY	1 cut(s)	505
Psp6I	CCWGG	3 cut(s)	366, 975, 1646
PspCI	CACGTG	1 cut(s)	958
PspGI	CCWGG	3 cut(s)	366, 975, 1646
PspLI	CGTACG	2 cut(s)	702, 1344
PspN4I	GGNNCC	8 cut(s)	271, 457, 719, 748, 1225, 1609, 1645, 1714
PspOMI	GGGCCC	1 cut(s)	1643
PspPI	GGNCC	6 cut(s)	269, 505, 1583, 1643, 1644, 1713
PspPPI	RGGWCCY	1 cut(s)	505
PspXI	VCTCGAGB	1 cut(s)	904
PsuI	RGATCY	3 cut(s)	724, 881, 936
PsyI	GACNNNGTC	2 cut(s)	1618, 1621
PvuI	CGATCG	1 cut(s)	819
PvuII	CAGCTG	1 cut(s)	1423
RruI	TCGCGA	1 cut(s)	1130
RsaI	GTAC	7 cut(s)	365, 386, 704, 748, 1346, 1398, 1559
RsaNI	GTAC	7 cut(s)	364, 385, 703, 747, 1345, 1397, 1558
RseI	CAYNNNNRTG	4 cut(s)	80, 179, 464, 650
SalI	GTCGAC	1 cut(s)	1139
SapI	GCTCTTC	4 cut(s)	182, 477, 1016, 1058
SaqAI	TTAA	3 cut(s)	677, 1704, 1789
Sau96I	GGNCC	6 cut(s)	269, 505, 1583, 1643, 1644, 1713
ScaI	AGTACT	1 cut(s)	386
SchI	GAGTC	6 cut(s)	63, 227, 770, 1134, 1492, 1532
ScrFI	CCNGG	5 cut(s)	264, 368, 977, 1045, 1648
SduI	GDGCHC	5 cut(s)	471, 957, 1362, 1647, 1658
SfaNI	GCATC	4 cut(s)	515, 1191, 1209, 1449
SfoI	GGCGCC	1 cut(s)	1225
Sfr274I	CTCGAG	2 cut(s)	904, 1019
SfuI	TTCGAA	1 cut(s)	318
SgrAI	CRCCGGYG	1 cut(s)	1085
SinI	GGWCC	2 cut(s)	505, 1713
SlaI	CTCGAG	2 cut(s)	904, 1019
SmiMI	CAYNNNNRTG	4 cut(s)	80, 179, 464, 650
SmlI	CTYRAG	5 cut(s)	111, 470, 509, 904, 1019
SmoI	CTYRAG	5 cut(s)	111, 470, 509, 904, 1019
SphI	GCATGC	1 cut(s)	1406
Sse9I	AATT	6 cut(s)	154, 555, 589, 605, 626, 1682
SseBI	AGGCCT	2 cut(s)	551, 902
SspDI	GGCGCC	1 cut(s)	1223
SspI	AATATT	1 cut(s)	1732
SspMI	CTAG	1 cut(s)	1764
StuI	AGGCCT	2 cut(s)	551, 902
StyD4I	CCNGG	5 cut(s)	262, 366, 975, 1043, 1646
StyI	CCWWGG	5 cut(s)	39, 81, 546, 1116, 1716
TaaI	ACNGT	3 cut(s)	328, 964, 1138
TaiI	ACGT	7 cut(s)	281, 339, 704, 960, 1503, 1622, 1661
TaqI	TCGA	9 cut(s)	282, 318, 577, 905, 1014, 1020, 1140, 1676, 1727
TaqII	GACCGA	2 cut(s)	392, 935
TasI	AATT	6 cut(s)	154, 555, 589, 605, 626, 1682
TatI	WGTACW	2 cut(s)	384, 1557
TauI	GCSGC	6 cut(s)	293, 344, 359, 411, 848, 1115
TfiI	GAWTC	4 cut(s)	243, 639, 789, 1696
Tru1I	TTAA	3 cut(s)	677, 1704, 1789
Tru9I	TTAA	3 cut(s)	677, 1704, 1789
TscAI	CASTG	5 cut(s)	97, 104, 409, 652, 1324
TseFI	GTSAC	1 cut(s)	958
TseI	GCWGC	6 cut(s)	351, 658, 850, 870, 1492, 1589
Tsp45I	GTSAC	1 cut(s)	958
TspDTI	ATGAA	4 cut(s)	163, 631, 668, 1565
TspGWI	ACGGA	3 cut(s)	1550, 1580, 1689
TspRI	CASTG	5 cut(s)	97, 104, 409, 652, 1324
Tth111I	GACNNNGTC	2 cut(s)	1618, 1621
VneI	GTGCAC	1 cut(s)	1358
VpaK11BI	GGWCC	2 cut(s)	505, 1713
XapI	RAATTY	1 cut(s)	626
XceI	RCATGY	1 cut(s)	1406
XcmI	CCANNNNNNNNNTGG	1 cut(s)	591
XhoI	CTCGAG	2 cut(s)	904, 1019
XmiI	GTMKAC	1 cut(s)	1140
XmnI	GAANNNNTTC	2 cut(s)	486, 1777
XspI	CTAG	1 cut(s)	1764
ZraI	GACGTC	1 cut(s)	1620
ZrmI	AGTACT	1 cut(s)	386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.