Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0005865

Physical Location & Seq

Genomic Coordinates Reverse (-)

82590024 .. 82595109

Gene Structure 5086 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG482200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1263 bp

ATGTTTCACCGTGCCTATATAGTTAAGAAATTCAATTCTTATGATGATCTTGCATGTGCTTTATTTTACAGGATTTTCTCTCAAGATATCCCTGCAGATGTAGTAGTCGAAGTTGGCGAAGCCAATTTCTCCTTACACAAGTTCATGCTAGTGGCCAAGAGCAACCGGATTAGGCAACTGATATTGGAATCGGACGAACCAGACCTGACCCGAATCGACCTCTCCAACATTCCTGGAGGACCGGAGACGTTCGAGAAGGCAGCCAAGTTCTGCTACGGCGTCAACTTCGAAATCACAGTCCACAACGTAGCTGCTCTCCGATGCGCCGCCGAGTACCTCCAAATGACCGATAAGTATTGCGAGAACAACCTTACCGGCCGTACAGAAGATTTCCTCACTCAGGTGGCCTTGTCCAGCCTCTCCGGCGCCATTGTAGTTCTCAAATCATGTGAAGACCTCACTCCCATCGCTGAAGAACTCAAAATCGTTCAGAGATGTGTGGAAGTAGTCACATCCAAGGTTACAATCGAGGCAAACTTTCCGAGCCGCTCTCCGACGAACTGGTGGACGGAGGAGCTATCAATTTTGGACATTGACTTCTTCGGGAGAGTAATAACATCCATGAAACAACGTGCTTCGAAGACTCTGACCGTATCGAGTGCGATCGTTACATACGCCGAGAGATGGCTCCGGGATCTGATCCGGGACCACTCCGGAGCCGGCACCAAGTCCTTGGAGTCCGACGACTCCGACATCAGAATCCGGCAGCGGGAGCTTATACAATCCATAGTGGCTCTCCTTCCTTCCGAGAAGGCAGCTCTGCCGATCAACTTCATCTGCTGCCTTCTCAGATCAGCGACGTTTGTCAAGGCCTCGACGGCGACCAAGAACGAGCTAGAGAAGTGGATCTCGGCGATCTTGGAGCACGTAACCGTCGACGACCTGCTGGTCCTGTCGTTTAGTTACGACGGCGAGAGGCTGTTCGATTTGGAGAGCGTGAGGAGGATTATCTCGGGATTCGTGGAGAGGGAGAAGAGCGTGGCGGTTTTTAACGCCGGTGACTTCAAGGAGGTGTGCTCTGCTGCAATGCTCAGAGTTGCTAAGACTGTGGATGCGTATCTCGGCGAGATAGCCACTTGTACTGAGCTTAGCATATCCAAGTTTAATGGCATCGCCGTCCTCATCCCCAAAGGCGCGCGTAAAGTCGACGACGATCTCTATCGTGCCGTTGATATTTACTTGAAGGTAATAATTAGTCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

420

Amino Acids

47.02

Weight (kDa)

5.33

Isoelectric Point (pI)

33.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	25 - 122	1.1e-08	BTB/POZ domain
NPH3	PF03000	187 - 415	1e-61	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005865)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30520 AT2G30520 AT2G30520
fragaria_vesca	FvH4_3g40860 FvH4_3g40860 FvH4_3g40860 FvH4_3g40860
malus_domestica	MD03G1048900.v1.1 MD11G1051400.v1.1
prunus_persica	Prupe.6G039200_v2.0.a1 Prupe.6G039200_v2.0.a1
pyrus_communis	pycom03g03840 pycom11g04120
rosa_chinensis	RchiOBHm_Chr5g0073591
rosa_laevigata	RLG00000036398
rosa_multiflora	Rmu_co8263269.1_g000001 Rmu_co8430755.1_g000001 Rmu_sc0042142.1_g000002 Rmu_ssc0000242.1_g000005
rosa_roxburghii	Rroxscaffold_1G00007670
rosa_rugosa	Rorug05G0425200 Rorug05G0425300 Rorug05G0425400
rosa_samantha	Rh5AG482200 Rh5BG503000 Rh5CG526100 Rh5DG515200
rosa_wichuraiana	Rw5G044800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	947
Acc36I	ACCTGC	1 cut(s)	951
AccB1I	GGYRCC	2 cut(s)	425, 722
AccBSI	CCGCTC	1 cut(s)	549
AccI	GTMKAC	2 cut(s)	936, 1206
AccII	CGCG	2 cut(s)	1196, 1198
AccIII	TCCGGA	1 cut(s)	713
AciI	CCGC	4 cut(s)	327, 547, 769, 1043
AclWI	GGATC	3 cut(s)	694, 702, 914
AcoI	YGGCCR	2 cut(s)	153, 376
AcsI	RAATTY	1 cut(s)	29
AcuI	CTGAAG	1 cut(s)	492
AcyI	GRCGYC	2 cut(s)	279, 426
AfaI	GTAC	3 cut(s)	335, 382, 1141
AfiI	CCNNNNNNNGG	3 cut(s)	400, 684, 769
AgsI	TTSAA	3 cut(s)	34, 1066, 1243
AjnI	CCWGG	1 cut(s)	232
AleI	CACNNNNGTG	1 cut(s)	401
AluBI	AGCT	6 cut(s)	311, 577, 775, 818, 895, 1147
AluI	AGCT	6 cut(s)	311, 577, 775, 818, 895, 1147
Alw21I	GWGCWC	2 cut(s)	927, 1079
Alw26I	GTCTC	1 cut(s)	239
AlwI	GGATC	3 cut(s)	694, 702, 914
Ama87I	CYCGRG	1 cut(s)	1012
Aor13HI	TCCGGA	1 cut(s)	713
AoxI	GGCC	4 cut(s)	153, 376, 405, 870
ApeKI	GCWGC	6 cut(s)	260, 311, 766, 815, 840, 1082
ApoI	RAATTY	1 cut(s)	29
ArsI	GACNNNNNNTTYG	2 cut(s)	282, 314
AspLEI	GCGC	4 cut(s)	326, 428, 1196, 1198
AspS9I	GGNCC	3 cut(s)	239, 706, 949
AsuC2I	CCSGG	2 cut(s)	692, 704
AsuHPI	GGTGA	1 cut(s)	1070
AsuII	TTCGAA	2 cut(s)	288, 638
AvaI	CYCGRG	1 cut(s)	1012
AvaII	GGWCC	3 cut(s)	239, 706, 949
BalI	TGGCCA	1 cut(s)	155
BanI	GGYRCC	2 cut(s)	425, 722
BbsI	GAAGAC	2 cut(s)	459, 647
Bbv12I	GWGCWC	2 cut(s)	927, 1079
BbvI	GCAGC	6 cut(s)	272, 298, 778, 827, 827, 1069
BccI	CCATC	2 cut(s)	473, 678
BceAI	ACGGC	6 cut(s)	292, 363, 894, 985, 1160, 1211
BciT130I	CCWGG	1 cut(s)	234
BcnI	CCSGG	2 cut(s)	692, 704
BcoDI	GTCTC	1 cut(s)	239
BfaI	CTAG	2 cut(s)	149, 896
BfmI	CTRYAG	1 cut(s)	93
BfoI	RGCGCY	1 cut(s)	429
BfuAI	ACCTGC	1 cut(s)	951
BglI	GCCNNNNNGGC	2 cut(s)	423, 878
BisI	GCNGC	8 cut(s)	261, 312, 327, 547, 767, 816, 841, 1083
BlpI	GCTNAGC	1 cut(s)	1148
BlsI	GCNGC	8 cut(s)	262, 313, 328, 548, 768, 817, 842, 1084
Bme1390I	CCNGG	3 cut(s)	234, 692, 704
Bme18I	GGWCC	3 cut(s)	239, 706, 949
BmeT110I	CYCGRG	1 cut(s)	1012
BmgT120I	GGNCC	3 cut(s)	239, 706, 949
BmiI	GGNNCC	5 cut(s)	427, 689, 707, 718, 724
BmrFI	CCNGG	3 cut(s)	234, 692, 704
BmsI	GCATC	3 cut(s)	311, 1102, 1179
BoxI	GACNNNNGTC	1 cut(s)	863
BpiI	GAAGAC	2 cut(s)	459, 647
BplI	GAGNNNNNCTC	4 cut(s)	535, 567, 1061, 1093
BpmI	CTGGAG	1 cut(s)	255
Bpu1102I	GCTNAGC	1 cut(s)	1148
Bpu14I	TTCGAA	2 cut(s)	288, 638
BpuEI	CTTGAG	1 cut(s)	66
BpuMI	CCSGG	2 cut(s)	692, 704
BsaAI	YACGTR	1 cut(s)	928
BsaBI	GATNNNNATC	2 cut(s)	1116, 1218
BsaHI	GRCGYC	2 cut(s)	279, 426
BsaJI	CCNNGG	2 cut(s)	516, 732
BsaWI	WCCGGW	3 cut(s)	165, 241, 713
Bsc4I	CCNNNNNNNGG	3 cut(s)	400, 684, 769
Bse118I	RCCGGY	3 cut(s)	374, 719, 1055
Bse1I	ACTGG	1 cut(s)	566
Bse3DI	GCAATG	1 cut(s)	1092
Bse8I	GATNNNNATC	2 cut(s)	1116, 1218
BseAI	TCCGGA	1 cut(s)	713
BseBI	CCWGG	1 cut(s)	234
BseDI	CCNNGG	2 cut(s)	516, 732
BseGI	GGATG	4 cut(s)	512, 617, 1117, 1182
BseJI	GATNNNNATC	2 cut(s)	1116, 1218
BseLI	CCNNNNNNNGG	3 cut(s)	400, 684, 769
BseMI	GCAATG	1 cut(s)	1092
BseMII	CTCAG	4 cut(s)	413, 862, 1105, 1134
BseNI	ACTGG	1 cut(s)	566
BsePI	GCGCGC	1 cut(s)	1194
BseRI	GAGGAG	2 cut(s)	587, 1015
BseX3I	CGGCCG	1 cut(s)	376
BseXI	GCAGC	6 cut(s)	272, 298, 778, 827, 827, 1069
Bsh1236I	CGCG	2 cut(s)	1196, 1198
Bsh1285I	CGRYCG	2 cut(s)	379, 666
BshFI	GGCC	4 cut(s)	155, 378, 407, 872
BshNI	GGYRCC	2 cut(s)	425, 722
BsiEI	CGRYCG	2 cut(s)	379, 666
BsiHKAI	GWGCWC	2 cut(s)	927, 1079
BsiHKCI	CYCGRG	1 cut(s)	1012
BslFI	GGGAC	1 cut(s)	719
BslI	CCNNNNNNNGG	3 cut(s)	400, 684, 769
BsmAI	GTCTC	1 cut(s)	239
BsmBI	CGTCTC	1 cut(s)	239
BsmFI	GGGAC	1 cut(s)	719
BsnI	GGCC	4 cut(s)	155, 378, 407, 872
BsoBI	CYCGRG	1 cut(s)	1012
Bsp119I	TTCGAA	2 cut(s)	288, 638
Bsp1286I	GDGCHC	2 cut(s)	927, 1079
Bsp13I	TCCGGA	1 cut(s)	713
Bsp143I	GATC	9 cut(s)	46, 663, 694, 699, 825, 851, 906, 915, 1213
Bsp1720I	GCTNAGC	1 cut(s)	1148
BspACI	CCGC	4 cut(s)	327, 547, 769, 1043
BspANI	GGCC	4 cut(s)	155, 378, 407, 872
BspCNI	CTCAG	4 cut(s)	412, 861, 1104, 1135
BspEI	TCCGGA	1 cut(s)	713
BspFNI	CGCG	2 cut(s)	1196, 1198
BspLI	GGNNCC	5 cut(s)	427, 689, 707, 718, 724
BspMAI	CTGCAG	1 cut(s)	97
BspMI	ACCTGC	1 cut(s)	951
BspPI	GGATC	3 cut(s)	694, 702, 914
BspQI	GCTCTTC	1 cut(s)	1028
BspT104I	TTCGAA	2 cut(s)	288, 638
BspT107I	GGYRCC	2 cut(s)	425, 722
BsrBI	CCGCTC	1 cut(s)	549
BsrDI	GCAATG	1 cut(s)	1092
BsrFI	RCCGGY	3 cut(s)	374, 719, 1055
BsrI	ACTGG	1 cut(s)	566
BssAI	RCCGGY	3 cut(s)	374, 719, 1055
BssECI	CCNNGG	2 cut(s)	516, 732
BssHII	GCGCGC	1 cut(s)	1194
BssMI	GATC	9 cut(s)	46, 663, 694, 699, 825, 851, 906, 915, 1213
BssNI	GRCGYC	2 cut(s)	279, 426
BssT1I	CCWWGG	2 cut(s)	516, 732
Bst2UI	CCWGG	1 cut(s)	234
Bst4CI	ACNGT	5 cut(s)	11, 298, 652, 934, 1108
Bst6I	CTCTTC	1 cut(s)	1028
BstACI	GRCGYC	2 cut(s)	279, 426
BstBAI	YACGTR	1 cut(s)	928
BstBI	TTCGAA	2 cut(s)	288, 638
BstC8I	GCNNGC	2 cut(s)	721, 1196
BstDEI	CTNAG	6 cut(s)	399, 848, 1091, 1101, 1143, 1148
BstENI	CCTNNNNNAGG	1 cut(s)	398
BstF5I	GGATG	4 cut(s)	512, 617, 1117, 1182
BstFNI	CGCG	2 cut(s)	1196, 1198
BstH2I	RGCGCY	1 cut(s)	429
BstHHI	GCGC	4 cut(s)	326, 428, 1196, 1198
BstKTI	GATC	9 cut(s)	49, 666, 697, 702, 828, 854, 909, 918, 1216
BstMAI	GTCTC	1 cut(s)	239
BstMBI	GATC	9 cut(s)	46, 663, 694, 699, 825, 851, 906, 915, 1213
BstMCI	CGRYCG	2 cut(s)	379, 666
BstMWI	GCNNNNNNNGC	3 cut(s)	423, 772, 878
BstNI	CCWGG	1 cut(s)	234
BstNSI	RCATGY	1 cut(s)	57
BstPAI	GACNNNNGTC	1 cut(s)	863
BstSCI	CCNGG	3 cut(s)	232, 690, 702
BstSFI	CTRYAG	1 cut(s)	93
BstUI	CGCG	2 cut(s)	1196, 1198
BstV1I	GCAGC	6 cut(s)	272, 298, 778, 827, 827, 1069
BstV2I	GAAGAC	2 cut(s)	459, 647
BstX2I	RGATCY	2 cut(s)	694, 906
BstXI	CCANNNNNNTGG	1 cut(s)	733
BstYI	RGATCY	2 cut(s)	694, 906
BstZI	CGGCCG	1 cut(s)	376
BsuRI	GGCC	4 cut(s)	155, 378, 407, 872
BtgZI	GCGATG	2 cut(s)	451, 1156
BtsCI	GGATG	4 cut(s)	512, 617, 1117, 1182
BveI	ACCTGC	1 cut(s)	951
Cac8I	GCNNGC	2 cut(s)	721, 1196
CfoI	GCGC	4 cut(s)	326, 428, 1196, 1198
Cfr10I	RCCGGY	3 cut(s)	374, 719, 1055
Cfr13I	GGNCC	3 cut(s)	239, 706, 949
CseI	GACGC	1 cut(s)	268
Csp6I	GTAC	3 cut(s)	334, 381, 1140
CviAII	CATG	4 cut(s)	54, 145, 447, 622
CviQI	GTAC	3 cut(s)	334, 381, 1140
DdeI	CTNAG	6 cut(s)	399, 848, 1091, 1101, 1143, 1148
DinI	GGCGCC	1 cut(s)	427
DpnI	GATC	9 cut(s)	48, 665, 696, 701, 827, 853, 908, 917, 1215
DpnII	GATC	9 cut(s)	46, 663, 694, 699, 825, 851, 906, 915, 1213
DrdI	GACNNNNNNGTC	1 cut(s)	947
DseDI	GACNNNNNNGTC	1 cut(s)	947
EaeI	YGGCCR	2 cut(s)	153, 376
EagI	CGGCCG	1 cut(s)	376
Eam1104I	CTCTTC	1 cut(s)	1028
EarI	CTCTTC	1 cut(s)	1028
EclXI	CGGCCG	1 cut(s)	376
Eco130I	CCWWGG	2 cut(s)	516, 732
Eco147I	AGGCCT	1 cut(s)	872
Eco32I	GATATC	1 cut(s)	88
Eco47I	GGWCC	3 cut(s)	239, 706, 949
Eco52I	CGGCCG	1 cut(s)	376
Eco57I	CTGAAG	1 cut(s)	492
Eco88I	CYCGRG	1 cut(s)	1012
EcoNI	CCTNNNNNAGG	1 cut(s)	398
EcoRII	CCWGG	1 cut(s)	232
EcoRV	GATATC	1 cut(s)	88
EcoT14I	CCWWGG	2 cut(s)	516, 732
EgeI	GGCGCC	1 cut(s)	427
EheI	GGCGCC	1 cut(s)	427
ErhI	CCWWGG	2 cut(s)	516, 732
Esp3I	CGTCTC	1 cut(s)	239
FaeI	CATG	4 cut(s)	57, 148, 450, 625
FaqI	GGGAC	1 cut(s)	719
FatI	CATG	4 cut(s)	53, 144, 446, 621
FauI	CCCGC	1 cut(s)	762
FblI	GTMKAC	2 cut(s)	936, 1206
Fnu4HI	GCNGC	8 cut(s)	261, 312, 327, 547, 767, 816, 841, 1083
FokI	GGATG	4 cut(s)	499, 604, 1124, 1169
Fsp4HI	GCNGC	8 cut(s)	261, 312, 327, 547, 767, 816, 841, 1083
FspBI	CTAG	2 cut(s)	149, 896
GlaI	GCGC	4 cut(s)	325, 427, 1195, 1197
GluI	GCNGC	8 cut(s)	261, 312, 327, 547, 767, 816, 841, 1083
GsuI	CTGGAG	1 cut(s)	255
HaeII	RGCGCY	1 cut(s)	429
HaeIII	GGCC	4 cut(s)	155, 378, 407, 872
HgaI	GACGC	1 cut(s)	268
HhaI	GCGC	4 cut(s)	326, 428, 1196, 1198
Hin1I	GRCGYC	2 cut(s)	279, 426
Hin1II	CATG	4 cut(s)	57, 148, 450, 625
Hin6I	GCGC	4 cut(s)	324, 426, 1194, 1196
HinP1I	GCGC	4 cut(s)	324, 426, 1194, 1196
HincII	GTYRAC	3 cut(s)	283, 937, 1207
HindII	GTYRAC	3 cut(s)	283, 937, 1207
HinfI	GANTC	7 cut(s)	188, 213, 643, 737, 746, 759, 1017
HphI	GGTGA	1 cut(s)	1070
Hpy166II	GTNNAC	5 cut(s)	283, 301, 567, 937, 1207
Hpy188III	TCNNGA	5 cut(s)	83, 253, 604, 714, 1014
Hpy8I	GTNNAC	5 cut(s)	283, 301, 567, 937, 1207
Hpy99I	CGWCG	9 cut(s)	559, 746, 862, 880, 938, 941, 971, 1211, 1214
HpyAV	CCTTC	6 cut(s)	250, 805, 809, 813, 854, 1237
HpyCH4III	ACNGT	5 cut(s)	11, 298, 652, 934, 1108
HpyCH4IV	ACGT	5 cut(s)	248, 306, 631, 860, 927
HpyCH4V	TGCA	3 cut(s)	53, 95, 1085
HpyF10VI	GCNNNNNNNGC	3 cut(s)	423, 772, 878
HpyF3I	CTNAG	6 cut(s)	399, 848, 1091, 1101, 1143, 1148
HpySE526I	ACGT	5 cut(s)	248, 306, 631, 860, 927
Hsp92I	GRCGYC	2 cut(s)	279, 426
Hsp92II	CATG	4 cut(s)	57, 148, 450, 625
HspAI	GCGC	4 cut(s)	324, 426, 1194, 1196
KasI	GGCGCC	1 cut(s)	425
Kpn2I	TCCGGA	1 cut(s)	713
KroI	GCCGGC	1 cut(s)	719
KroNI	GCCGGC	1 cut(s)	721
Kzo9I	GATC	9 cut(s)	46, 663, 694, 699, 825, 851, 906, 915, 1213
LguI	GCTCTTC	1 cut(s)	1028
LmnI	GCTCC	5 cut(s)	574, 693, 716, 772, 922
Lsp1109I	GCAGC	6 cut(s)	272, 298, 778, 827, 827, 1069
LweI	GCATC	3 cut(s)	311, 1102, 1179
MaeI	CTAG	2 cut(s)	149, 896
MaeII	ACGT	5 cut(s)	248, 306, 631, 860, 927
MaeIII	GTNAC	6 cut(s)	508, 520, 667, 928, 962, 1058
MalI	GATC	9 cut(s)	48, 665, 696, 701, 827, 853, 908, 917, 1215
MbiI	CCGCTC	1 cut(s)	549
MboI	GATC	9 cut(s)	46, 663, 694, 699, 825, 851, 906, 915, 1213
MboII	GAAGA	6 cut(s)	398, 464, 485, 592, 652, 1045
MflI	RGATCY	2 cut(s)	694, 906
MhlI	GDGCHC	2 cut(s)	927, 1079
MlsI	TGGCCA	1 cut(s)	155
MluCI	AATT	5 cut(s)	29, 34, 124, 582, 1251
MluNI	TGGCCA	1 cut(s)	155
Mly113I	GGCGCC	1 cut(s)	426
MlyI	GAGTC	3 cut(s)	637, 740, 746
MmeI	TCCRAC	4 cut(s)	249, 578, 765, 774
Mox20I	TGGCCA	1 cut(s)	155
MroI	TCCGGA	1 cut(s)	713
MroNI	GCCGGC	1 cut(s)	719
MscI	TGGCCA	1 cut(s)	155
MseI	TTAA	3 cut(s)	24, 1050, 1164
MslI	CAYNNNNRTG	2 cut(s)	149, 401
Msp20I	TGGCCA	1 cut(s)	155
MspA1I	CMGCKG	1 cut(s)	769
MspR9I	CCNGG	3 cut(s)	234, 692, 704
MvaI	CCWGG	1 cut(s)	234
MvnI	CGCG	2 cut(s)	1196, 1198
MwoI	GCNNNNNNNGC	3 cut(s)	423, 772, 878
NaeI	GCCGGC	1 cut(s)	721
NarI	GGCGCC	1 cut(s)	426
NciI	CCSGG	2 cut(s)	692, 704
NdeII	GATC	9 cut(s)	46, 663, 694, 699, 825, 851, 906, 915, 1213
NgoMIV	GCCGGC	1 cut(s)	719
NlaIII	CATG	4 cut(s)	57, 148, 450, 625
NlaIV	GGNNCC	5 cut(s)	427, 689, 707, 718, 724
NmeAIII	GCCGAG	4 cut(s)	355, 703, 890, 1101
NmuCI	GTSAC	2 cut(s)	508, 1058
NspI	RCATGY	1 cut(s)	57
NspV	TTCGAA	2 cut(s)	288, 638
OliI	CACNNNNGTG	1 cut(s)	401
PauI	GCGCGC	1 cut(s)	1194
PceI	AGGCCT	1 cut(s)	872
PciSI	GCTCTTC	1 cut(s)	1028
PcsI	WCGNNNNNNNCGW	2 cut(s)	114, 933
PdiI	GCCGGC	1 cut(s)	721
PfeI	GAWTC	4 cut(s)	188, 213, 759, 1017
PfoI	TCCNGGA	3 cut(s)	232, 690, 702
PkrI	GCNGC	8 cut(s)	262, 313, 328, 548, 768, 817, 842, 1084
Ple19I	CGATCG	1 cut(s)	666
PleI	GAGTC	3 cut(s)	637, 740, 745
PluTI	GGCGCC	1 cut(s)	429
PpsI	GAGTC	3 cut(s)	637, 740, 745
Ppu21I	YACGTR	1 cut(s)	928
PshAI	GACNNNNGTC	1 cut(s)	863
Psp6I	CCWGG	1 cut(s)	232
PspGI	CCWGG	1 cut(s)	232
PspN4I	GGNNCC	5 cut(s)	427, 689, 707, 718, 724
PspPI	GGNCC	3 cut(s)	239, 706, 949
PstI	CTGCAG	1 cut(s)	97
PsuI	RGATCY	2 cut(s)	694, 906
PteI	GCGCGC	1 cut(s)	1194
PvuI	CGATCG	1 cut(s)	666
RsaI	GTAC	3 cut(s)	335, 382, 1141
RsaNI	GTAC	3 cut(s)	334, 381, 1140
RseI	CAYNNNNRTG	2 cut(s)	149, 401
SalI	GTCGAC	2 cut(s)	935, 1205
SapI	GCTCTTC	1 cut(s)	1028
SaqAI	TTAA	3 cut(s)	24, 1050, 1164
SatI	GCNGC	8 cut(s)	261, 312, 327, 547, 767, 816, 841, 1083
Sau3AI	GATC	9 cut(s)	46, 663, 694, 699, 825, 851, 906, 915, 1213
Sau96I	GGNCC	3 cut(s)	239, 706, 949
SchI	GAGTC	3 cut(s)	637, 740, 746
ScrFI	CCNGG	3 cut(s)	234, 692, 704
SduI	GDGCHC	2 cut(s)	927, 1079
SfaNI	GCATC	3 cut(s)	311, 1102, 1179
SfcI	CTRYAG	1 cut(s)	93
SfoI	GGCGCC	1 cut(s)	427
SfuI	TTCGAA	2 cut(s)	288, 638
SgrAI	CRCCGGYG	1 cut(s)	1055
SgrDI	CGTCGACG	1 cut(s)	935
SinI	GGWCC	3 cut(s)	239, 706, 949
SmiMI	CAYNNNNRTG	2 cut(s)	149, 401
SmlI	CTYRAG	1 cut(s)	81
SmoI	CTYRAG	1 cut(s)	81
Sse9I	AATT	5 cut(s)	29, 34, 124, 582, 1251
SseBI	AGGCCT	1 cut(s)	872
SsiI	CCGC	4 cut(s)	327, 547, 769, 1043
SspDI	GGCGCC	1 cut(s)	425
SspMI	CTAG	2 cut(s)	149, 896
StuI	AGGCCT	1 cut(s)	872
StyD4I	CCNGG	3 cut(s)	232, 690, 702
StyI	CCWWGG	2 cut(s)	516, 732
TaaI	ACNGT	5 cut(s)	11, 298, 652, 934, 1108
TaiI	ACGT	5 cut(s)	251, 309, 634, 863, 930
TaqII	GACCGA	1 cut(s)	362
TasI	AATT	5 cut(s)	29, 34, 124, 582, 1251
TatI	WGTACW	1 cut(s)	1139
TauI	GCSGC	2 cut(s)	329, 549
TfiI	GAWTC	4 cut(s)	188, 213, 759, 1017
Tru1I	TTAA	3 cut(s)	24, 1050, 1164
Tru9I	TTAA	3 cut(s)	24, 1050, 1164
TseFI	GTSAC	2 cut(s)	508, 1058
TseI	GCWGC	6 cut(s)	260, 311, 766, 815, 840, 1082
Tsp45I	GTSAC	2 cut(s)	508, 1058
TspDTI	ATGAA	3 cut(s)	133, 638, 823
TspGWI	ACGGA	1 cut(s)	584
VpaK11BI	GGWCC	3 cut(s)	239, 706, 949
XagI	CCTNNNNNAGG	1 cut(s)	398
XapI	RAATTY	1 cut(s)	29
XceI	RCATGY	1 cut(s)	57
XmiI	GTMKAC	2 cut(s)	936, 1206
XspI	CTAG	2 cut(s)	149, 896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.