Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000242.1

Orthogroup ID

OG0005865

Physical Location & Seq

Genomic Coordinates Reverse (-)

18996 .. 21410

Gene Structure 2415 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000242.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

atggcttcccttgcccaaaacaacagcaggctttccatagccatggagcgaactggccaatggattttctctcaagatatccctgcagatgtagtagtcgaagttggcgaagccaatttctccttacacaagttcatgctagtggccaagagcaaccggattaggcaactgatattggaatcggacgaaccagacctgacccgaatcgacctctccaacattcctggaggaccggagacgttcgagaaggcagccaagttctgctacggcgtcaacttcgaaatcacagtccacaacgtagctgctctccgatgcgccgccgagtacctccaaatgaccgataagtattgcgagaacaaccttaccggccgtacagaagatttcctcactcaggtggccttgtccagcctctccggcgccattgtagttctcaaatcatgcgaagacctcactcccatcgctgaagaactcaaaatcgttcagagatgtgtggaagtagtcacatccaaggttacaatcgaggcaaactttccgagccgctctccgacgaactggtggacggaggagctatcaattttggacattgatttcttcgggagagtaataacatccatgaaacaacgtgcttcgaagactctgaccgtatcgagtgcgatcgttacatacgccgagagatggctccgggatctgatccgggaccactccggagccggcaccaagtccttggagtccgacgactccgacatcagaatccggcagcgggagcttatacaatccatagtggctctccttccttccgagaaggcagctctgccgatcaacttcatctgctgccttctcaggtcagcgacgtttgtcaaggcctcgacggcgaccaagaacgagctagagaagtggatctcggcgatcttggagcacgtaaccgtcgacgacctgctggtcctgtcgtttagttacgacggcgagaggctgttcgatctggagagcgtgaggaggattatctcgggattcgtggagagggagaagagcgtggcggtttttaacgccggtgacttcagggaggtgtgctctgctgcaatgctcagagttgctaagactgtggatgcgtatctcggcgagatagccacttgtactgagcttagcatatccaagtttaatggcatcgccgtcctcatccccaaaggcgcgcgtaaagtcgacgacgatctctatcgtgccgttgatatttacttgaagtctcatccgaaccttgatgagatagagagggagaaagtgtgcagtgtaatggatgcgttgaagttatcatacgaagcgagattacatgcttcgcaaaataagcgtttgcctgtacagattgtgctgcatgcgctctatttcgaccagctcaagctgaggagcggtgaagacgagaacgacatgcaaatggatgctgtatcaaccagaaatcaggtacaggccgacgtgtcgttggctaaggagaatgaggcactgcgaacagagctgttgaagatgaagatgtacatttcggacataaaaaagactggaagtggtgtaggtgcaagtgcagcaacgacgtcgtctgggaaaggcggtgggcctagaaagccgacgtttttctcgtccgtgtcgaagaaactgggaaagttgaatccgttcaaaaatgggtctaaggacaccttgaacattgatgattgtgtggacgttaccaagcctagaagaagaaggttttccatctcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

579

Amino Acids

64.44

Weight (kDa)

6.27

Isoelectric Point (pI)

33.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005865)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30520 AT2G30520 AT2G30520
fragaria_vesca	FvH4_3g40860 FvH4_3g40860 FvH4_3g40860 FvH4_3g40860
malus_domestica	MD03G1048900.v1.1 MD11G1051400.v1.1
prunus_persica	Prupe.6G039200_v2.0.a1 Prupe.6G039200_v2.0.a1
pyrus_communis	pycom03g03840 pycom11g04120
rosa_chinensis	RchiOBHm_Chr5g0073591
rosa_laevigata	RLG00000036398
rosa_multiflora	Rmu_co8263269.1_g000001 Rmu_co8430755.1_g000001 Rmu_sc0042142.1_g000002 Rmu_ssc0000242.1_g000005
rosa_roxburghii	Rroxscaffold_1G00007670
rosa_rugosa	Rorug05G0425200 Rorug05G0425300 Rorug05G0425400
rosa_samantha	Rh5AG482200 Rh5BG503000 Rh5CG526100 Rh5DG515200
rosa_wichuraiana	Rw5G044800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	938
AatII	GACGTC	1 cut(s)	1577
Acc36I	ACCTGC	1 cut(s)	942
AccB1I	GGYRCC	2 cut(s)	416, 713
AccBSI	CCGCTC	2 cut(s)	540, 1398
AccI	GTMKAC	2 cut(s)	927, 1197
AccII	CGCG	2 cut(s)	1187, 1189
AccIII	TCCGGA	1 cut(s)	704
AciI	CCGC	6 cut(s)	318, 538, 760, 1034, 1398, 1590
AclWI	GGATC	3 cut(s)	685, 693, 905
AcoI	YGGCCR	3 cut(s)	55, 144, 367
AcuI	CTGAAG	2 cut(s)	483, 1039
AcyI	GRCGYC	3 cut(s)	270, 417, 1574
AfaI	GTAC	6 cut(s)	326, 373, 1132, 1350, 1452, 1520
AfiI	CCNNNNNNNGG	3 cut(s)	391, 675, 760
AflIII	ACRYGT	1 cut(s)	1461
AgsI	TTSAA	6 cut(s)	1234, 1297, 1507, 1648, 1657, 1681
AjiI	CACGTC	1 cut(s)	1462
AjnI	CCWGG	1 cut(s)	223
AleI	CACNNNNGTG	1 cut(s)	392
AluBI	AGCT	9 cut(s)	302, 568, 766, 809, 886, 1138, 1384, 1390, 1501
AluI	AGCT	9 cut(s)	302, 568, 766, 809, 886, 1138, 1384, 1390, 1501
Alw21I	GWGCWC	2 cut(s)	918, 1070
Alw26I	GTCTC	2 cut(s)	230, 1242
AlwI	GGATC	3 cut(s)	685, 693, 905
Ama87I	CYCGRG	1 cut(s)	1003
Aor13HI	TCCGGA	1 cut(s)	704
AoxI	GGCC	7 cut(s)	55, 144, 367, 396, 861, 1455, 1595
ApeKI	GCWGC	8 cut(s)	251, 302, 757, 806, 831, 1073, 1360, 1565
ArsI	GACNNNNNNTTYG	2 cut(s)	273, 305
Asp700I	GAANNNNTTC	2 cut(s)	1652, 1726
AspLEI	GCGC	5 cut(s)	317, 419, 1187, 1189, 1369
AspS9I	GGNCC	4 cut(s)	230, 697, 940, 1595
AsuC2I	CCSGG	2 cut(s)	683, 695
AsuHPI	GGTGA	2 cut(s)	1061, 1412
AsuII	TTCGAA	2 cut(s)	279, 629
AvaI	CYCGRG	1 cut(s)	1003
AvaII	GGWCC	3 cut(s)	230, 697, 940
BalI	TGGCCA	2 cut(s)	57, 146
BanI	GGYRCC	2 cut(s)	416, 713
BarI	GAAGNNNNNNTAC	4 cut(s)	1289, 1302, 1321, 1334
BbsI	GAAGAC	3 cut(s)	450, 638, 1410
Bbv12I	GWGCWC	2 cut(s)	918, 1070
BbvCI	CCTCAGC	1 cut(s)	1391
BbvI	GCAGC	8 cut(s)	263, 289, 769, 818, 818, 1060, 1347, 1577
BccI	CCATC	3 cut(s)	464, 669, 1739
BceAI	ACGGC	6 cut(s)	283, 354, 885, 976, 1151, 1202
BcgI	CGANNNNNNTGC	2 cut(s)	1557, 1591
BciT130I	CCWGG	1 cut(s)	225
BcnI	CCSGG	2 cut(s)	683, 695
BcoDI	GTCTC	2 cut(s)	230, 1242
BfaI	CTAG	4 cut(s)	140, 887, 1599, 1713
BfmI	CTRYAG	1 cut(s)	84
BfoI	RGCGCY	1 cut(s)	420
BfuAI	ACCTGC	1 cut(s)	942
BglI	GCCNNNNNGGC	2 cut(s)	414, 869
BlpI	GCTNAGC	1 cut(s)	1139
Bme1390I	CCNGG	3 cut(s)	225, 683, 695
Bme18I	GGWCC	3 cut(s)	230, 697, 940
BmeT110I	CYCGRG	1 cut(s)	1003
BmgBI	CACGTC	1 cut(s)	1462
BmgT120I	GGNCC	4 cut(s)	230, 697, 940, 1595
BmiI	GGNNCC	5 cut(s)	418, 680, 698, 709, 715
BmrFI	CCNGG	3 cut(s)	225, 683, 695
BmrI	ACTGGG	1 cut(s)	1646
BmsI	GCATC	5 cut(s)	302, 1093, 1170, 1279, 1417
BmuI	ACTGGG	1 cut(s)	1646
BoxI	GACNNNNGTC	1 cut(s)	854
BpiI	GAAGAC	3 cut(s)	450, 638, 1410
BplI	GAGNNNNNCTC	4 cut(s)	526, 558, 1052, 1084
BpmI	CTGGAG	2 cut(s)	246, 1001
Bpu10I	CCTNAGC	2 cut(s)	1391, 1473
Bpu1102I	GCTNAGC	1 cut(s)	1139
Bpu14I	TTCGAA	2 cut(s)	279, 629
BpuEI	CTTGAG	2 cut(s)	57, 1370
BpuMI	CCSGG	2 cut(s)	683, 695
BsaAI	YACGTR	1 cut(s)	919
BsaBI	GATNNNNATC	2 cut(s)	1107, 1209
BsaHI	GRCGYC	3 cut(s)	270, 417, 1574
BsaJI	CCNNGG	3 cut(s)	42, 507, 723
BsaWI	WCCGGW	3 cut(s)	156, 232, 704
BsaXI	ACNNNNNCTCC	2 cut(s)	1259, 1289
Bsc4I	CCNNNNNNNGG	3 cut(s)	391, 675, 760
Bse118I	RCCGGY	3 cut(s)	365, 710, 1046
Bse1I	ACTGG	4 cut(s)	58, 557, 1546, 1641
Bse3DI	GCAATG	1 cut(s)	1083
Bse8I	GATNNNNATC	2 cut(s)	1107, 1209
BseAI	TCCGGA	1 cut(s)	704
BseBI	CCWGG	1 cut(s)	225
BseDI	CCNNGG	3 cut(s)	42, 507, 723
BseGI	GGATG	7 cut(s)	503, 608, 1108, 1173, 1240, 1294, 1432
BseJI	GATNNNNATC	2 cut(s)	1107, 1209
BseLI	CCNNNNNNNGG	3 cut(s)	391, 675, 760
BseMI	GCAATG	1 cut(s)	1083
BseMII	CTCAG	5 cut(s)	404, 853, 1096, 1125, 1382
BseNI	ACTGG	4 cut(s)	58, 557, 1546, 1641
BsePI	GCGCGC	1 cut(s)	1185
BseRI	GAGGAG	3 cut(s)	578, 1006, 1408
BseX3I	CGGCCG	1 cut(s)	367
BseXI	GCAGC	8 cut(s)	263, 289, 769, 818, 818, 1060, 1347, 1577
BsgI	GTGCAG	2 cut(s)	1297, 1584
Bsh1236I	CGCG	2 cut(s)	1187, 1189
Bsh1285I	CGRYCG	2 cut(s)	370, 657
BshFI	GGCC	7 cut(s)	57, 146, 369, 398, 863, 1457, 1597
BshNI	GGYRCC	2 cut(s)	416, 713
BsiEI	CGRYCG	2 cut(s)	370, 657
BsiHKAI	GWGCWC	2 cut(s)	918, 1070
BsiHKCI	CYCGRG	1 cut(s)	1003
BslFI	GGGAC	1 cut(s)	710
BslI	CCNNNNNNNGG	3 cut(s)	391, 675, 760
BsmAI	GTCTC	2 cut(s)	230, 1242
BsmBI	CGTCTC	1 cut(s)	230
BsmFI	GGGAC	1 cut(s)	710
BsnI	GGCC	7 cut(s)	57, 146, 369, 398, 863, 1457, 1597
BsoBI	CYCGRG	1 cut(s)	1003
Bsp119I	TTCGAA	2 cut(s)	279, 629
Bsp1286I	GDGCHC	2 cut(s)	918, 1070
Bsp13I	TCCGGA	1 cut(s)	704
Bsp1407I	TGTACA	2 cut(s)	1348, 1518
Bsp143I	GATC	8 cut(s)	654, 685, 690, 816, 897, 906, 976, 1204
Bsp1720I	GCTNAGC	1 cut(s)	1139
Bsp19I	CCATGG	1 cut(s)	42
BspACI	CCGC	6 cut(s)	318, 538, 760, 1034, 1398, 1590
BspANI	GGCC	7 cut(s)	57, 146, 369, 398, 863, 1457, 1597
BspCNI	CTCAG	5 cut(s)	403, 852, 1095, 1126, 1383
BspEI	TCCGGA	1 cut(s)	704
BspFNI	CGCG	2 cut(s)	1187, 1189
BspLI	GGNNCC	5 cut(s)	418, 680, 698, 709, 715
BspMAI	CTGCAG	1 cut(s)	88
BspMI	ACCTGC	1 cut(s)	942
BspPI	GGATC	3 cut(s)	685, 693, 905
BspQI	GCTCTTC	1 cut(s)	1019
BspT104I	TTCGAA	2 cut(s)	279, 629
BspT107I	GGYRCC	2 cut(s)	416, 713
BsrBI	CCGCTC	2 cut(s)	540, 1398
BsrDI	GCAATG	1 cut(s)	1083
BsrFI	RCCGGY	3 cut(s)	365, 710, 1046
BsrGI	TGTACA	2 cut(s)	1348, 1518
BsrI	ACTGG	4 cut(s)	58, 557, 1546, 1641
BssAI	RCCGGY	3 cut(s)	365, 710, 1046
BssECI	CCNNGG	3 cut(s)	42, 507, 723
BssHII	GCGCGC	1 cut(s)	1185
BssMI	GATC	8 cut(s)	654, 685, 690, 816, 897, 906, 976, 1204
BssNI	GRCGYC	3 cut(s)	270, 417, 1574
BssT1I	CCWWGG	3 cut(s)	42, 507, 723
Bst2UI	CCWGG	1 cut(s)	225
Bst4CI	ACNGT	4 cut(s)	289, 643, 925, 1099
Bst6I	CTCTTC	1 cut(s)	1019
BstACI	GRCGYC	3 cut(s)	270, 417, 1574
BstAUI	TGTACA	2 cut(s)	1348, 1518
BstBAI	YACGTR	1 cut(s)	919
BstBI	TTCGAA	2 cut(s)	279, 629
BstC8I	GCNNGC	4 cut(s)	29, 712, 1187, 1365
BstDEI	CTNAG	9 cut(s)	390, 839, 1082, 1092, 1134, 1139, 1391, 1473, 1668
BstDSI	CCRYGG	1 cut(s)	42
BstENI	CCTNNNNNAGG	1 cut(s)	389
BstF5I	GGATG	7 cut(s)	503, 608, 1108, 1173, 1240, 1294, 1432
BstFNI	CGCG	2 cut(s)	1187, 1189
BstH2I	RGCGCY	1 cut(s)	420
BstHHI	GCGC	5 cut(s)	317, 419, 1187, 1189, 1369
BstKTI	GATC	8 cut(s)	657, 688, 693, 819, 900, 909, 979, 1207
BstMAI	GTCTC	2 cut(s)	230, 1242
BstMBI	GATC	8 cut(s)	654, 685, 690, 816, 897, 906, 976, 1204
BstMCI	CGRYCG	2 cut(s)	370, 657
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 414, 763, 869, 1336, 1366, 1498, 1565, 1603
BstNI	CCWGG	1 cut(s)	225
BstNSI	RCATGY	3 cut(s)	1325, 1367, 1420
BstPAI	GACNNNNGTC	1 cut(s)	854
BstSCI	CCNGG	3 cut(s)	223, 681, 693
BstSFI	CTRYAG	1 cut(s)	84
BstUI	CGCG	2 cut(s)	1187, 1189
BstV1I	GCAGC	8 cut(s)	263, 289, 769, 818, 818, 1060, 1347, 1577
BstV2I	GAAGAC	3 cut(s)	450, 638, 1410
BstX2I	RGATCY	2 cut(s)	685, 897
BstXI	CCANNNNNNTGG	2 cut(s)	43, 724
BstYI	RGATCY	2 cut(s)	685, 897
BstZI	CGGCCG	1 cut(s)	367
BsuRI	GGCC	7 cut(s)	57, 146, 369, 398, 863, 1457, 1597
BtgI	CCRYGG	1 cut(s)	42
BtgZI	GCGATG	2 cut(s)	442, 1147
BtrI	CACGTC	1 cut(s)	1462
BtsCI	GGATG	7 cut(s)	503, 608, 1108, 1173, 1240, 1294, 1432
BtsI	GCAGTG	2 cut(s)	1285, 1487
BtsIMutI	CAGTG	2 cut(s)	1285, 1487
BveI	ACCTGC	1 cut(s)	942
Cac8I	GCNNGC	4 cut(s)	29, 712, 1187, 1365
CfoI	GCGC	5 cut(s)	317, 419, 1187, 1189, 1369
Cfr10I	RCCGGY	3 cut(s)	365, 710, 1046
Cfr13I	GGNCC	4 cut(s)	230, 697, 940, 1595
CseI	GACGC	1 cut(s)	259
Csp6I	GTAC	6 cut(s)	325, 372, 1131, 1349, 1451, 1519
CviAII	CATG	7 cut(s)	43, 136, 438, 613, 1322, 1364, 1417
CviQI	GTAC	6 cut(s)	325, 372, 1131, 1349, 1451, 1519
DdeI	CTNAG	9 cut(s)	390, 839, 1082, 1092, 1134, 1139, 1391, 1473, 1668
DinI	GGCGCC	1 cut(s)	418
DpnI	GATC	8 cut(s)	656, 687, 692, 818, 899, 908, 978, 1206
DpnII	GATC	8 cut(s)	654, 685, 690, 816, 897, 906, 976, 1204
DrdI	GACNNNNNNGTC	1 cut(s)	938
DseDI	GACNNNNNNGTC	1 cut(s)	938
EaeI	YGGCCR	3 cut(s)	55, 144, 367
EagI	CGGCCG	1 cut(s)	367
Eam1104I	CTCTTC	1 cut(s)	1019
EarI	CTCTTC	1 cut(s)	1019
EclXI	CGGCCG	1 cut(s)	367
Eco130I	CCWWGG	3 cut(s)	42, 507, 723
Eco147I	AGGCCT	1 cut(s)	863
Eco32I	GATATC	1 cut(s)	79
Eco47I	GGWCC	3 cut(s)	230, 697, 940
Eco52I	CGGCCG	1 cut(s)	367
Eco57I	CTGAAG	2 cut(s)	483, 1039
Eco88I	CYCGRG	1 cut(s)	1003
EcoNI	CCTNNNNNAGG	1 cut(s)	389
EcoRII	CCWGG	1 cut(s)	223
EcoRV	GATATC	1 cut(s)	79
EcoT14I	CCWWGG	3 cut(s)	42, 507, 723
EgeI	GGCGCC	1 cut(s)	418
EheI	GGCGCC	1 cut(s)	418
ErhI	CCWWGG	3 cut(s)	42, 507, 723
Esp3I	CGTCTC	1 cut(s)	230
FaeI	CATG	7 cut(s)	46, 139, 441, 616, 1325, 1367, 1420
FalI	AAGNNNNNCTT	2 cut(s)	1661, 1693
FaqI	GGGAC	1 cut(s)	710
FatI	CATG	7 cut(s)	42, 135, 437, 612, 1321, 1363, 1416
FauI	CCCGC	1 cut(s)	753
FblI	GTMKAC	2 cut(s)	927, 1197
FokI	GGATG	7 cut(s)	490, 595, 1115, 1160, 1227, 1301, 1439
FspBI	CTAG	4 cut(s)	140, 887, 1599, 1713
GlaI	GCGC	5 cut(s)	316, 418, 1186, 1188, 1368
GsuI	CTGGAG	2 cut(s)	246, 1001
HaeII	RGCGCY	1 cut(s)	420
HaeIII	GGCC	7 cut(s)	57, 146, 369, 398, 863, 1457, 1597
HgaI	GACGC	1 cut(s)	259
HhaI	GCGC	5 cut(s)	317, 419, 1187, 1189, 1369
Hin1I	GRCGYC	3 cut(s)	270, 417, 1574
Hin1II	CATG	7 cut(s)	46, 139, 441, 616, 1325, 1367, 1420
Hin6I	GCGC	5 cut(s)	315, 417, 1185, 1187, 1367
HinP1I	GCGC	5 cut(s)	315, 417, 1185, 1187, 1367
HincII	GTYRAC	3 cut(s)	274, 928, 1198
HindII	GTYRAC	3 cut(s)	274, 928, 1198
HinfI	GANTC	8 cut(s)	179, 204, 634, 728, 737, 750, 1008, 1648
HphI	GGTGA	2 cut(s)	1061, 1412
Hpy166II	GTNNAC	6 cut(s)	274, 292, 558, 928, 1198, 1699
Hpy188III	TCNNGA	6 cut(s)	74, 244, 595, 705, 980, 1005
Hpy8I	GTNNAC	6 cut(s)	274, 292, 558, 928, 1198, 1699
HpyAV	CCTTC	6 cut(s)	241, 796, 800, 804, 845, 1716
HpyCH4III	ACNGT	4 cut(s)	289, 643, 925, 1099
HpyCH4IV	ACGT	9 cut(s)	239, 297, 622, 851, 918, 1461, 1574, 1610, 1701
HpyCH4V	TGCA	7 cut(s)	86, 1076, 1278, 1363, 1420, 1559, 1565
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 414, 763, 869, 1336, 1366, 1498, 1565, 1603
HpyF3I	CTNAG	9 cut(s)	390, 839, 1082, 1092, 1134, 1139, 1391, 1473, 1668
HpySE526I	ACGT	9 cut(s)	239, 297, 622, 851, 918, 1461, 1574, 1610, 1701
Hsp92I	GRCGYC	3 cut(s)	270, 417, 1574
Hsp92II	CATG	7 cut(s)	46, 139, 441, 616, 1325, 1367, 1420
HspAI	GCGC	5 cut(s)	315, 417, 1185, 1187, 1367
KasI	GGCGCC	1 cut(s)	416
Kpn2I	TCCGGA	1 cut(s)	704
KroI	GCCGGC	1 cut(s)	710
KroNI	GCCGGC	1 cut(s)	712
Kzo9I	GATC	8 cut(s)	654, 685, 690, 816, 897, 906, 976, 1204
LguI	GCTCTTC	1 cut(s)	1019
LmnI	GCTCC	7 cut(s)	46, 565, 684, 707, 763, 913, 1395
Lsp1109I	GCAGC	8 cut(s)	263, 289, 769, 818, 818, 1060, 1347, 1577
LweI	GCATC	5 cut(s)	302, 1093, 1170, 1279, 1417
MaeI	CTAG	4 cut(s)	140, 887, 1599, 1713
MaeII	ACGT	9 cut(s)	239, 297, 622, 851, 918, 1461, 1574, 1610, 1701
MaeIII	GTNAC	7 cut(s)	499, 511, 658, 919, 953, 1049, 1702
MalI	GATC	8 cut(s)	656, 687, 692, 818, 899, 908, 978, 1206
MbiI	CCGCTC	2 cut(s)	540, 1398
MboI	GATC	8 cut(s)	654, 685, 690, 816, 897, 906, 976, 1204
MflI	RGATCY	2 cut(s)	685, 897
MhlI	GDGCHC	2 cut(s)	918, 1070
MlsI	TGGCCA	2 cut(s)	57, 146
MluCI	AATT	2 cut(s)	115, 573
MluNI	TGGCCA	2 cut(s)	57, 146
Mly113I	GGCGCC	1 cut(s)	417
MlyI	GAGTC	3 cut(s)	628, 731, 737
MmeI	TCCRAC	4 cut(s)	240, 569, 756, 765
Mox20I	TGGCCA	2 cut(s)	57, 146
MroI	TCCGGA	1 cut(s)	704
MroNI	GCCGGC	1 cut(s)	710
MroXI	GAANNNNTTC	2 cut(s)	1652, 1726
MscI	TGGCCA	2 cut(s)	57, 146
MseI	TTAA	3 cut(s)	1041, 1155, 1738
MslI	CAYNNNNRTG	4 cut(s)	41, 140, 392, 1421
Msp20I	TGGCCA	2 cut(s)	57, 146
MspA1I	CMGCKG	1 cut(s)	760
MspR9I	CCNGG	3 cut(s)	225, 683, 695
MvaI	CCWGG	1 cut(s)	225
MvnI	CGCG	2 cut(s)	1187, 1189
MwoI	GCNNNNNNNGC	9 cut(s)	11, 414, 763, 869, 1336, 1366, 1498, 1565, 1603
NaeI	GCCGGC	1 cut(s)	712
NarI	GGCGCC	1 cut(s)	417
NciI	CCSGG	2 cut(s)	683, 695
NcoI	CCATGG	1 cut(s)	42
NdeII	GATC	8 cut(s)	654, 685, 690, 816, 897, 906, 976, 1204
NgoMIV	GCCGGC	1 cut(s)	710
NlaIII	CATG	7 cut(s)	46, 139, 441, 616, 1325, 1367, 1420
NlaIV	GGNNCC	5 cut(s)	418, 680, 698, 709, 715
NmeAIII	GCCGAG	4 cut(s)	346, 694, 881, 1092
NmuCI	GTSAC	2 cut(s)	499, 1049
NspI	RCATGY	3 cut(s)	1325, 1367, 1420
NspV	TTCGAA	2 cut(s)	279, 629
OliI	CACNNNNGTG	1 cut(s)	392
PaeI	GCATGC	1 cut(s)	1367
PauI	GCGCGC	1 cut(s)	1185
PceI	AGGCCT	1 cut(s)	863
PciSI	GCTCTTC	1 cut(s)	1019
PcsI	WCGNNNNNNNCGW	4 cut(s)	105, 924, 1616, 1625
PdiI	GCCGGC	1 cut(s)	712
PdmI	GAANNNNTTC	2 cut(s)	1652, 1726
PfeI	GAWTC	5 cut(s)	179, 204, 750, 1008, 1648
PflFI	GACNNNGTC	1 cut(s)	1576
PfoI	TCCNGGA	3 cut(s)	223, 681, 693
Ple19I	CGATCG	1 cut(s)	657
PleI	GAGTC	3 cut(s)	628, 731, 736
PluTI	GGCGCC	1 cut(s)	420
PpsI	GAGTC	3 cut(s)	628, 731, 736
Ppu21I	YACGTR	1 cut(s)	919
PshAI	GACNNNNGTC	1 cut(s)	854
Psp6I	CCWGG	1 cut(s)	223
PspGI	CCWGG	1 cut(s)	223
PspN4I	GGNNCC	5 cut(s)	418, 680, 698, 709, 715
PspPI	GGNCC	4 cut(s)	230, 697, 940, 1595
PstI	CTGCAG	1 cut(s)	88
PsuI	RGATCY	2 cut(s)	685, 897
PsyI	GACNNNGTC	1 cut(s)	1576
PteI	GCGCGC	1 cut(s)	1185
PvuI	CGATCG	1 cut(s)	657
RsaI	GTAC	6 cut(s)	326, 373, 1132, 1350, 1452, 1520
RsaNI	GTAC	6 cut(s)	325, 372, 1131, 1349, 1451, 1519
RseI	CAYNNNNRTG	4 cut(s)	41, 140, 392, 1421
SalI	GTCGAC	2 cut(s)	926, 1196
SapI	GCTCTTC	1 cut(s)	1019
SaqAI	TTAA	3 cut(s)	1041, 1155, 1738
Sau3AI	GATC	8 cut(s)	654, 685, 690, 816, 897, 906, 976, 1204
Sau96I	GGNCC	4 cut(s)	230, 697, 940, 1595
SchI	GAGTC	3 cut(s)	628, 731, 737
ScrFI	CCNGG	3 cut(s)	225, 683, 695
SduI	GDGCHC	2 cut(s)	918, 1070
SfaNI	GCATC	5 cut(s)	302, 1093, 1170, 1279, 1417
SfcI	CTRYAG	1 cut(s)	84
SfoI	GGCGCC	1 cut(s)	418
SfuI	TTCGAA	2 cut(s)	279, 629
SgrAI	CRCCGGYG	1 cut(s)	1046
SgrDI	CGTCGACG	1 cut(s)	926
SinI	GGWCC	3 cut(s)	230, 697, 940
SmiMI	CAYNNNNRTG	4 cut(s)	41, 140, 392, 1421
SmlI	CTYRAG	2 cut(s)	72, 1385
SmoI	CTYRAG	2 cut(s)	72, 1385
SphI	GCATGC	1 cut(s)	1367
Sse9I	AATT	2 cut(s)	115, 573
SseBI	AGGCCT	1 cut(s)	863
SsiI	CCGC	6 cut(s)	318, 538, 760, 1034, 1398, 1590
SspDI	GGCGCC	1 cut(s)	416
SspMI	CTAG	4 cut(s)	140, 887, 1599, 1713
StuI	AGGCCT	1 cut(s)	863
StyD4I	CCNGG	3 cut(s)	223, 681, 693
StyI	CCWWGG	3 cut(s)	42, 507, 723
TaaI	ACNGT	4 cut(s)	289, 643, 925, 1099
TaiI	ACGT	9 cut(s)	242, 300, 625, 854, 921, 1464, 1577, 1613, 1704
TaqII	GACCGA	1 cut(s)	353
TasI	AATT	2 cut(s)	115, 573
TatI	WGTACW	3 cut(s)	1130, 1348, 1518
TauI	GCSGC	2 cut(s)	320, 540
TfiI	GAWTC	5 cut(s)	179, 204, 750, 1008, 1648
Tru1I	TTAA	3 cut(s)	1041, 1155, 1738
Tru9I	TTAA	3 cut(s)	1041, 1155, 1738
TscAI	CASTG	2 cut(s)	1285, 1494
TseFI	GTSAC	2 cut(s)	499, 1049
TseI	GCWGC	8 cut(s)	251, 302, 757, 806, 831, 1073, 1360, 1565
Tsp45I	GTSAC	2 cut(s)	499, 1049
TspDTI	ATGAA	4 cut(s)	124, 629, 814, 1526
TspGWI	ACGGA	3 cut(s)	575, 1612, 1641
TspRI	CASTG	2 cut(s)	1285, 1494
Tth111I	GACNNNGTC	1 cut(s)	1576
VpaK11BI	GGWCC	3 cut(s)	230, 697, 940
XagI	CCTNNNNNAGG	1 cut(s)	389
XceI	RCATGY	3 cut(s)	1325, 1367, 1420
XmiI	GTMKAC	2 cut(s)	927, 1197
XmnI	GAANNNNTTC	2 cut(s)	1652, 1726
XspI	CTAG	4 cut(s)	140, 887, 1599, 1713
ZraI	GACGTC	1 cut(s)	1575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.