Rh5BG503000

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0005865
Physical Location & Seq
Reverse (-)
79939991 .. 79943593
3603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG503000.1

Sequence Viewer

Length: 1605 bp
ATGCTAGTGGCCAAGAGCAACCGGATTAGGCAACTGATATTGGAATCGGACGAACCAGACCTGACCCGAATCGACCTCTCCAACATTCCTGGAGGACCGGAGACGTTCGAGAAGGCAGCCAAGTTCTGCTACGGCGTCAACTTCGAAATCACAGTCCACAACGTAGCTGCTCTCCGATGCGCCGCCGAGTACCTCCAAATGACCGATAAGTATTGCGAGAACAACCTTACCGGCCGTACAGAAGATTTCCTCACTCAGGTGGCCTTGTCCAGCCTCTCCGGCGCCATTGTCGTTCTCAAATCATGCGAAGACCTCACTCCCATCGCTGAAGAACTCAAAATCGTTCAGAGATGTGTGGAAGTAGTCACATCCAAGGTTACAATCGAGGCAAACTTTCCGAGCCGCTCTCCGACGAACTGGTGGACGGAGGAGCTATCAATTTTGGACATTGATTTCTTCGGGAGAGTAATAACATCCATGAAACAACGTGCTTCGAAGACTCTGACCGTATCGAGTGCGATCGTTACATACGCCGAGAGATGGCTCCGGGATCTGATCCGGGACCACTCCGGAGCCGGCACCAAGTCCTTGGAGTCCGACGACTCCGACATCAGAATCCGGCAGCGGGAGCTTATACAATCCATAGTGGCTCTCCTTCCTTCCGAGAAGGCAGCTCTGCCGATCAACTTCATCTGCTGCCTTCTCAGATCAGCGACGTTTGTCAAGGCCTCGACGGCGACCAAGAACGAGCTAGAGAAGTGGATCTCGGCGATCTTGGAGCACGTAACCGTCGACGACCTGCTGGTCCTGTCGTTTAGTTACGACGGCGAGAGGCTGTTCGATCTGGAGAGCGTGAGGAGGATTATCTCGGGATTCGTGGAGAGGGAGAAGAGCGTGGCGGTTTTTAACGCCGGTGACTTCAAGGAGGTGTGCTCTGCTGCAATGCTCAGAGTTGCTAAGACTGTGGATGCGTATCTCGGCGAGATAGCCACTTGTACTGAGCTTAGCATATCCAAGTTTAATGGCATCGCCGTCCTCATCCCCAAAGGCGCGCGTAAAGTCGACGACGATCTCTATCGTGCCGTTGATATTTACTTGAAGTCTCATCCGAACCTTGATGAGATAGAGAGGGAGAAAGTGTGCAGTGTAATGGATGCGTTGAAGTTATCATACGAAGCGAGATTACATGCTTCGCAAAATAAGCGTTTGCCTGTACAGATTGTGCTGCATGCGCTCTATTTCGACCAGCTCAAGCTGAGGAGCGGTGAAGACGAGAACGACATGCAAATGGATGCTGTATCGACCAGAAATCAGGTACAGGCCGACGTGTCGTTGGCTAAGGAGAATGAGGCACTGCGAACAGAGCTGTTGAAGATGAAGATGTACATTTCGGACATAAAAAAGACTGGAAGTGGTGTAGGTGCAAGTGCAGCAACGACGTCGTCTGGGAAAGGCGGTGGGCCTAGAAAGCCGACGTTTTTCTCGTCCGTGTCGAAGAAACTGGGAAAGTTGAATCCGTTCAAAAATGGGTCTAAGGACACCTTGAACATTGATGATTGTGTGGACGTTACCAAGCCTAGAAGAAGAAGGTTTTCCATCTCTTAA

Protein Analysis

534

Amino Acids

59.42

Weight (kDa)

6.65

Isoelectric Point (pI)

33.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 139 - 393 2.6e-75 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 803
AatII GACGTC 1 cut(s) 1442
Acc36I ACCTGC 1 cut(s) 807
AccB1I GGYRCC 2 cut(s) 281, 578
AccBSI CCGCTC 2 cut(s) 405, 1263
AccI GTMKAC 2 cut(s) 792, 1062
AccII CGCG 2 cut(s) 1052, 1054
AccIII TCCGGA 1 cut(s) 569
AciI CCGC 6 cut(s) 183, 403, 625, 899, 1263, 1455
AclWI GGATC 3 cut(s) 550, 558, 770
AcoI YGGCCR 2 cut(s) 9, 232
AcuI CTGAAG 1 cut(s) 348
AcyI GRCGYC 3 cut(s) 135, 282, 1439
AfaI GTAC 6 cut(s) 191, 238, 997, 1215, 1317, 1385
AfiI CCNNNNNNNGG 3 cut(s) 256, 540, 625
AflIII ACRYGT 1 cut(s) 1326
AgsI TTSAA 7 cut(s) 922, 1099, 1162, 1372, 1513, 1522, 1546
AjiI CACGTC 1 cut(s) 1327
AjnI CCWGG 1 cut(s) 88
AleI CACNNNNGTG 1 cut(s) 257
AluBI AGCT 9 cut(s) 167, 433, 631, 674, 751, 1003, 1249, 1255, 1366
AluI AGCT 9 cut(s) 167, 433, 631, 674, 751, 1003, 1249, 1255, 1366
Alw21I GWGCWC 2 cut(s) 783, 935
Alw26I GTCTC 2 cut(s) 95, 1107
AlwI GGATC 3 cut(s) 550, 558, 770
Ama87I CYCGRG 1 cut(s) 868
Aor13HI TCCGGA 1 cut(s) 569
AoxI GGCC 6 cut(s) 9, 232, 261, 726, 1320, 1460
ApeKI GCWGC 8 cut(s) 116, 167, 622, 671, 696, 938, 1225, 1430
ArsI GACNNNNNNTTYG 2 cut(s) 138, 170
Asp700I GAANNNNTTC 2 cut(s) 1517, 1591
AspLEI GCGC 5 cut(s) 182, 284, 1052, 1054, 1234
AspS9I GGNCC 4 cut(s) 95, 562, 805, 1460
AsuC2I CCSGG 2 cut(s) 548, 560
AsuHPI GGTGA 2 cut(s) 926, 1277
AsuII TTCGAA 2 cut(s) 144, 494
AvaI CYCGRG 1 cut(s) 868
AvaII GGWCC 3 cut(s) 95, 562, 805
BalI TGGCCA 1 cut(s) 11
BanI GGYRCC 2 cut(s) 281, 578
BarI GAAGNNNNNNTAC 4 cut(s) 1154, 1167, 1186, 1199
BbsI GAAGAC 3 cut(s) 315, 503, 1275
Bbv12I GWGCWC 2 cut(s) 783, 935
BbvCI CCTCAGC 1 cut(s) 1256
BbvI GCAGC 8 cut(s) 128, 154, 634, 683, 683, 925, 1212, 1442
BccI CCATC 3 cut(s) 329, 534, 1604
BceAI ACGGC 6 cut(s) 148, 219, 750, 841, 1016, 1067
BcgI CGANNNNNNTGC 2 cut(s) 1422, 1456
BciT130I CCWGG 1 cut(s) 90
BcnI CCSGG 2 cut(s) 548, 560
BcoDI GTCTC 2 cut(s) 95, 1107
BfaI CTAG 4 cut(s) 5, 752, 1464, 1578
BfoI RGCGCY 1 cut(s) 285
BfuAI ACCTGC 1 cut(s) 807
BglI GCCNNNNNGGC 2 cut(s) 279, 734
BlpI GCTNAGC 1 cut(s) 1004
Bme1390I CCNGG 3 cut(s) 90, 548, 560
Bme18I GGWCC 3 cut(s) 95, 562, 805
BmeT110I CYCGRG 1 cut(s) 868
BmgBI CACGTC 1 cut(s) 1327
BmgT120I GGNCC 4 cut(s) 95, 562, 805, 1460
BmiI GGNNCC 5 cut(s) 283, 545, 563, 574, 580
BmrFI CCNGG 3 cut(s) 90, 548, 560
BmrI ACTGGG 1 cut(s) 1511
BmsI GCATC 5 cut(s) 167, 958, 1035, 1144, 1282
BmuI ACTGGG 1 cut(s) 1511
BoxI GACNNNNGTC 1 cut(s) 719
BpiI GAAGAC 3 cut(s) 315, 503, 1275
BplI GAGNNNNNCTC 4 cut(s) 391, 423, 917, 949
BpmI CTGGAG 2 cut(s) 111, 866
Bpu10I CCTNAGC 2 cut(s) 1256, 1338
Bpu1102I GCTNAGC 1 cut(s) 1004
Bpu14I TTCGAA 2 cut(s) 144, 494
BpuEI CTTGAG 1 cut(s) 1235
BpuMI CCSGG 2 cut(s) 548, 560
BsaAI YACGTR 1 cut(s) 784
BsaBI GATNNNNATC 2 cut(s) 972, 1074
BsaHI GRCGYC 3 cut(s) 135, 282, 1439
BsaJI CCNNGG 2 cut(s) 372, 588
BsaWI WCCGGW 3 cut(s) 21, 97, 569
BsaXI ACNNNNNCTCC 2 cut(s) 1124, 1154
Bsc4I CCNNNNNNNGG 3 cut(s) 256, 540, 625
Bse118I RCCGGY 3 cut(s) 230, 575, 911
Bse1I ACTGG 3 cut(s) 422, 1411, 1506
Bse3DI GCAATG 1 cut(s) 948
Bse8I GATNNNNATC 2 cut(s) 972, 1074
BseAI TCCGGA 1 cut(s) 569
BseBI CCWGG 1 cut(s) 90
BseDI CCNNGG 2 cut(s) 372, 588
BseGI GGATG 7 cut(s) 368, 473, 973, 1038, 1105, 1159, 1297
BseJI GATNNNNATC 2 cut(s) 972, 1074
BseLI CCNNNNNNNGG 3 cut(s) 256, 540, 625
BseMI GCAATG 1 cut(s) 948
BseMII CTCAG 5 cut(s) 269, 718, 961, 990, 1247
BseNI ACTGG 3 cut(s) 422, 1411, 1506
BsePI GCGCGC 1 cut(s) 1050
BseRI GAGGAG 3 cut(s) 443, 871, 1273
BseX3I CGGCCG 1 cut(s) 232
BseXI GCAGC 8 cut(s) 128, 154, 634, 683, 683, 925, 1212, 1442
BsgI GTGCAG 2 cut(s) 1162, 1449
Bsh1236I CGCG 2 cut(s) 1052, 1054
Bsh1285I CGRYCG 2 cut(s) 235, 522
BshFI GGCC 6 cut(s) 11, 234, 263, 728, 1322, 1462
BshNI GGYRCC 2 cut(s) 281, 578
BsiEI CGRYCG 2 cut(s) 235, 522
BsiHKAI GWGCWC 2 cut(s) 783, 935
BsiHKCI CYCGRG 1 cut(s) 868
BslFI GGGAC 1 cut(s) 575
BslI CCNNNNNNNGG 3 cut(s) 256, 540, 625
BsmAI GTCTC 2 cut(s) 95, 1107
BsmBI CGTCTC 1 cut(s) 95
BsmFI GGGAC 1 cut(s) 575
BsnI GGCC 6 cut(s) 11, 234, 263, 728, 1322, 1462
BsoBI CYCGRG 1 cut(s) 868
Bsp119I TTCGAA 2 cut(s) 144, 494
Bsp1286I GDGCHC 2 cut(s) 783, 935
Bsp13I TCCGGA 1 cut(s) 569
Bsp1407I TGTACA 2 cut(s) 1213, 1383
Bsp143I GATC 9 cut(s) 519, 550, 555, 681, 707, 762, 771, 841, 1069
Bsp1720I GCTNAGC 1 cut(s) 1004
BspACI CCGC 6 cut(s) 183, 403, 625, 899, 1263, 1455
BspANI GGCC 6 cut(s) 11, 234, 263, 728, 1322, 1462
BspCNI CTCAG 5 cut(s) 268, 717, 960, 991, 1248
BspEI TCCGGA 1 cut(s) 569
BspFNI CGCG 2 cut(s) 1052, 1054
BspLI GGNNCC 5 cut(s) 283, 545, 563, 574, 580
BspMI ACCTGC 1 cut(s) 807
BspPI GGATC 3 cut(s) 550, 558, 770
BspQI GCTCTTC 1 cut(s) 884
BspT104I TTCGAA 2 cut(s) 144, 494
BspT107I GGYRCC 2 cut(s) 281, 578
BsrBI CCGCTC 2 cut(s) 405, 1263
BsrDI GCAATG 1 cut(s) 948
BsrFI RCCGGY 3 cut(s) 230, 575, 911
BsrGI TGTACA 2 cut(s) 1213, 1383
BsrI ACTGG 3 cut(s) 422, 1411, 1506
BssAI RCCGGY 3 cut(s) 230, 575, 911
BssECI CCNNGG 2 cut(s) 372, 588
BssHII GCGCGC 1 cut(s) 1050
BssMI GATC 9 cut(s) 519, 550, 555, 681, 707, 762, 771, 841, 1069
BssNI GRCGYC 3 cut(s) 135, 282, 1439
BssT1I CCWWGG 2 cut(s) 372, 588
Bst2UI CCWGG 1 cut(s) 90
Bst4CI ACNGT 4 cut(s) 154, 508, 790, 964
Bst6I CTCTTC 1 cut(s) 884
BstACI GRCGYC 3 cut(s) 135, 282, 1439
BstAUI TGTACA 2 cut(s) 1213, 1383
BstBAI YACGTR 1 cut(s) 784
BstBI TTCGAA 2 cut(s) 144, 494
BstC8I GCNNGC 3 cut(s) 577, 1052, 1230
BstDEI CTNAG 9 cut(s) 255, 704, 947, 957, 999, 1004, 1256, 1338, 1533
BstENI CCTNNNNNAGG 1 cut(s) 254
BstF5I GGATG 7 cut(s) 368, 473, 973, 1038, 1105, 1159, 1297
BstFNI CGCG 2 cut(s) 1052, 1054
BstH2I RGCGCY 1 cut(s) 285
BstHHI GCGC 5 cut(s) 182, 284, 1052, 1054, 1234
BstKTI GATC 9 cut(s) 522, 553, 558, 684, 710, 765, 774, 844, 1072
BstMAI GTCTC 2 cut(s) 95, 1107
BstMBI GATC 9 cut(s) 519, 550, 555, 681, 707, 762, 771, 841, 1069
BstMCI CGRYCG 2 cut(s) 235, 522
BstMWI GCNNNNNNNGC 8 cut(s) 279, 628, 734, 1201, 1231, 1363, 1430, 1468
BstNI CCWGG 1 cut(s) 90
BstNSI RCATGY 3 cut(s) 1190, 1232, 1285
BstPAI GACNNNNGTC 1 cut(s) 719
BstSCI CCNGG 3 cut(s) 88, 546, 558
BstUI CGCG 2 cut(s) 1052, 1054
BstV1I GCAGC 8 cut(s) 128, 154, 634, 683, 683, 925, 1212, 1442
BstV2I GAAGAC 3 cut(s) 315, 503, 1275
BstX2I RGATCY 2 cut(s) 550, 762
BstXI CCANNNNNNTGG 1 cut(s) 589
BstYI RGATCY 2 cut(s) 550, 762
BstZI CGGCCG 1 cut(s) 232
BsuRI GGCC 6 cut(s) 11, 234, 263, 728, 1322, 1462
BtgZI GCGATG 2 cut(s) 307, 1012
BtrI CACGTC 1 cut(s) 1327
BtsCI GGATG 7 cut(s) 368, 473, 973, 1038, 1105, 1159, 1297
BtsI GCAGTG 2 cut(s) 1150, 1352
BtsIMutI CAGTG 2 cut(s) 1150, 1352
BveI ACCTGC 1 cut(s) 807
Cac8I GCNNGC 3 cut(s) 577, 1052, 1230
CfoI GCGC 5 cut(s) 182, 284, 1052, 1054, 1234
Cfr10I RCCGGY 3 cut(s) 230, 575, 911
Cfr13I GGNCC 4 cut(s) 95, 562, 805, 1460
CseI GACGC 1 cut(s) 124
Csp6I GTAC 6 cut(s) 190, 237, 996, 1214, 1316, 1384
CviAII CATG 5 cut(s) 303, 478, 1187, 1229, 1282
CviQI GTAC 6 cut(s) 190, 237, 996, 1214, 1316, 1384
DdeI CTNAG 9 cut(s) 255, 704, 947, 957, 999, 1004, 1256, 1338, 1533
DinI GGCGCC 1 cut(s) 283
DpnI GATC 9 cut(s) 521, 552, 557, 683, 709, 764, 773, 843, 1071
DpnII GATC 9 cut(s) 519, 550, 555, 681, 707, 762, 771, 841, 1069
DrdI GACNNNNNNGTC 1 cut(s) 803
DseDI GACNNNNNNGTC 1 cut(s) 803
EaeI YGGCCR 2 cut(s) 9, 232
EagI CGGCCG 1 cut(s) 232
Eam1104I CTCTTC 1 cut(s) 884
EarI CTCTTC 1 cut(s) 884
EclXI CGGCCG 1 cut(s) 232
Eco130I CCWWGG 2 cut(s) 372, 588
Eco147I AGGCCT 1 cut(s) 728
Eco47I GGWCC 3 cut(s) 95, 562, 805
Eco52I CGGCCG 1 cut(s) 232
Eco57I CTGAAG 1 cut(s) 348
Eco88I CYCGRG 1 cut(s) 868
EcoNI CCTNNNNNAGG 1 cut(s) 254
EcoRII CCWGG 1 cut(s) 88
EcoT14I CCWWGG 2 cut(s) 372, 588
EgeI GGCGCC 1 cut(s) 283
EheI GGCGCC 1 cut(s) 283
ErhI CCWWGG 2 cut(s) 372, 588
Esp3I CGTCTC 1 cut(s) 95
FaeI CATG 5 cut(s) 306, 481, 1190, 1232, 1285
FalI AAGNNNNNCTT 2 cut(s) 1526, 1558
FaqI GGGAC 1 cut(s) 575
FatI CATG 5 cut(s) 302, 477, 1186, 1228, 1281
FauI CCCGC 1 cut(s) 618
FblI GTMKAC 2 cut(s) 792, 1062
FokI GGATG 7 cut(s) 355, 460, 980, 1025, 1092, 1166, 1304
FspBI CTAG 4 cut(s) 5, 752, 1464, 1578
GlaI GCGC 5 cut(s) 181, 283, 1051, 1053, 1233
GsuI CTGGAG 2 cut(s) 111, 866
HaeII RGCGCY 1 cut(s) 285
HaeIII GGCC 6 cut(s) 11, 234, 263, 728, 1322, 1462
HgaI GACGC 1 cut(s) 124
HhaI GCGC 5 cut(s) 182, 284, 1052, 1054, 1234
Hin1I GRCGYC 3 cut(s) 135, 282, 1439
Hin1II CATG 5 cut(s) 306, 481, 1190, 1232, 1285
Hin6I GCGC 5 cut(s) 180, 282, 1050, 1052, 1232
HinP1I GCGC 5 cut(s) 180, 282, 1050, 1052, 1232
HincII GTYRAC 3 cut(s) 139, 793, 1063
HindII GTYRAC 3 cut(s) 139, 793, 1063
HinfI GANTC 8 cut(s) 44, 69, 499, 593, 602, 615, 873, 1513
HphI GGTGA 2 cut(s) 926, 1277
Hpy166II GTNNAC 6 cut(s) 139, 157, 423, 793, 1063, 1564
Hpy188III TCNNGA 5 cut(s) 109, 460, 570, 845, 870
Hpy8I GTNNAC 6 cut(s) 139, 157, 423, 793, 1063, 1564
HpyAV CCTTC 6 cut(s) 106, 661, 665, 669, 710, 1581
HpyCH4III ACNGT 4 cut(s) 154, 508, 790, 964
HpyCH4IV ACGT 9 cut(s) 104, 162, 487, 716, 783, 1326, 1439, 1475, 1566
HpyCH4V TGCA 6 cut(s) 941, 1143, 1228, 1285, 1424, 1430
HpyF10VI GCNNNNNNNGC 8 cut(s) 279, 628, 734, 1201, 1231, 1363, 1430, 1468
HpyF3I CTNAG 9 cut(s) 255, 704, 947, 957, 999, 1004, 1256, 1338, 1533
HpySE526I ACGT 9 cut(s) 104, 162, 487, 716, 783, 1326, 1439, 1475, 1566
Hsp92I GRCGYC 3 cut(s) 135, 282, 1439
Hsp92II CATG 5 cut(s) 306, 481, 1190, 1232, 1285
HspAI GCGC 5 cut(s) 180, 282, 1050, 1052, 1232
KasI GGCGCC 1 cut(s) 281
Kpn2I TCCGGA 1 cut(s) 569
KroI GCCGGC 1 cut(s) 575
KroNI GCCGGC 1 cut(s) 577
Kzo9I GATC 9 cut(s) 519, 550, 555, 681, 707, 762, 771, 841, 1069
LguI GCTCTTC 1 cut(s) 884
LmnI GCTCC 6 cut(s) 430, 549, 572, 628, 778, 1260
Lsp1109I GCAGC 8 cut(s) 128, 154, 634, 683, 683, 925, 1212, 1442
LweI GCATC 5 cut(s) 167, 958, 1035, 1144, 1282
MaeI CTAG 4 cut(s) 5, 752, 1464, 1578
MaeII ACGT 9 cut(s) 104, 162, 487, 716, 783, 1326, 1439, 1475, 1566
MaeIII GTNAC 7 cut(s) 364, 376, 523, 784, 818, 914, 1567
MalI GATC 9 cut(s) 521, 552, 557, 683, 709, 764, 773, 843, 1071
MbiI CCGCTC 2 cut(s) 405, 1263
MboI GATC 9 cut(s) 519, 550, 555, 681, 707, 762, 771, 841, 1069
MflI RGATCY 2 cut(s) 550, 762
MhlI GDGCHC 2 cut(s) 783, 935
MlsI TGGCCA 1 cut(s) 11
MluCI AATT 1 cut(s) 438
MluNI TGGCCA 1 cut(s) 11
Mly113I GGCGCC 1 cut(s) 282
MlyI GAGTC 3 cut(s) 493, 596, 602
MmeI TCCRAC 4 cut(s) 105, 434, 621, 630
Mox20I TGGCCA 1 cut(s) 11
MroI TCCGGA 1 cut(s) 569
MroNI GCCGGC 1 cut(s) 575
MroXI GAANNNNTTC 2 cut(s) 1517, 1591
MscI TGGCCA 1 cut(s) 11
MseI TTAA 3 cut(s) 906, 1020, 1603
MslI CAYNNNNRTG 2 cut(s) 257, 1286
Msp20I TGGCCA 1 cut(s) 11
MspA1I CMGCKG 1 cut(s) 625
MspR9I CCNGG 3 cut(s) 90, 548, 560
MvaI CCWGG 1 cut(s) 90
MvnI CGCG 2 cut(s) 1052, 1054
MwoI GCNNNNNNNGC 8 cut(s) 279, 628, 734, 1201, 1231, 1363, 1430, 1468
NaeI GCCGGC 1 cut(s) 577
NarI GGCGCC 1 cut(s) 282
NciI CCSGG 2 cut(s) 548, 560
NdeII GATC 9 cut(s) 519, 550, 555, 681, 707, 762, 771, 841, 1069
NgoMIV GCCGGC 1 cut(s) 575
NlaIII CATG 5 cut(s) 306, 481, 1190, 1232, 1285
NlaIV GGNNCC 5 cut(s) 283, 545, 563, 574, 580
NmeAIII GCCGAG 4 cut(s) 211, 559, 746, 957
NmuCI GTSAC 2 cut(s) 364, 914
NspI RCATGY 3 cut(s) 1190, 1232, 1285
NspV TTCGAA 2 cut(s) 144, 494
OliI CACNNNNGTG 1 cut(s) 257
PaeI GCATGC 1 cut(s) 1232
PauI GCGCGC 1 cut(s) 1050
PceI AGGCCT 1 cut(s) 728
PciSI GCTCTTC 1 cut(s) 884
PcsI WCGNNNNNNNCGW 3 cut(s) 789, 1481, 1490
PdiI GCCGGC 1 cut(s) 577
PdmI GAANNNNTTC 2 cut(s) 1517, 1591
PfeI GAWTC 5 cut(s) 44, 69, 615, 873, 1513
PflFI GACNNNGTC 1 cut(s) 1441
PfoI TCCNGGA 3 cut(s) 88, 546, 558
Ple19I CGATCG 1 cut(s) 522
PleI GAGTC 3 cut(s) 493, 596, 601
PluTI GGCGCC 1 cut(s) 285
PpsI GAGTC 3 cut(s) 493, 596, 601
Ppu21I YACGTR 1 cut(s) 784
PshAI GACNNNNGTC 1 cut(s) 719
Psp6I CCWGG 1 cut(s) 88
PspGI CCWGG 1 cut(s) 88
PspN4I GGNNCC 5 cut(s) 283, 545, 563, 574, 580
PspPI GGNCC 4 cut(s) 95, 562, 805, 1460
PsuI RGATCY 2 cut(s) 550, 762
PsyI GACNNNGTC 1 cut(s) 1441
PteI GCGCGC 1 cut(s) 1050
PvuI CGATCG 1 cut(s) 522
RsaI GTAC 6 cut(s) 191, 238, 997, 1215, 1317, 1385
RsaNI GTAC 6 cut(s) 190, 237, 996, 1214, 1316, 1384
RseI CAYNNNNRTG 2 cut(s) 257, 1286
SalI GTCGAC 2 cut(s) 791, 1061
SapI GCTCTTC 1 cut(s) 884
SaqAI TTAA 3 cut(s) 906, 1020, 1603
Sau3AI GATC 9 cut(s) 519, 550, 555, 681, 707, 762, 771, 841, 1069
Sau96I GGNCC 4 cut(s) 95, 562, 805, 1460
SchI GAGTC 3 cut(s) 493, 596, 602
ScrFI CCNGG 3 cut(s) 90, 548, 560
SduI GDGCHC 2 cut(s) 783, 935
SfaNI GCATC 5 cut(s) 167, 958, 1035, 1144, 1282
SfoI GGCGCC 1 cut(s) 283
SfuI TTCGAA 2 cut(s) 144, 494
SgrAI CRCCGGYG 1 cut(s) 911
SgrDI CGTCGACG 1 cut(s) 791
SinI GGWCC 3 cut(s) 95, 562, 805
SmiMI CAYNNNNRTG 2 cut(s) 257, 1286
SmlI CTYRAG 1 cut(s) 1250
SmoI CTYRAG 1 cut(s) 1250
SphI GCATGC 1 cut(s) 1232
Sse9I AATT 1 cut(s) 438
SseBI AGGCCT 1 cut(s) 728
SsiI CCGC 6 cut(s) 183, 403, 625, 899, 1263, 1455
SspDI GGCGCC 1 cut(s) 281
SspMI CTAG 4 cut(s) 5, 752, 1464, 1578
StuI AGGCCT 1 cut(s) 728
StyD4I CCNGG 3 cut(s) 88, 546, 558
StyI CCWWGG 2 cut(s) 372, 588
TaaI ACNGT 4 cut(s) 154, 508, 790, 964
TaiI ACGT 9 cut(s) 107, 165, 490, 719, 786, 1329, 1442, 1478, 1569
TaqII GACCGA 1 cut(s) 218
TasI AATT 1 cut(s) 438
TatI WGTACW 3 cut(s) 995, 1213, 1383
TauI GCSGC 2 cut(s) 185, 405
TfiI GAWTC 5 cut(s) 44, 69, 615, 873, 1513
Tru1I TTAA 3 cut(s) 906, 1020, 1603
Tru9I TTAA 3 cut(s) 906, 1020, 1603
TscAI CASTG 2 cut(s) 1150, 1359
TseFI GTSAC 2 cut(s) 364, 914
TseI GCWGC 8 cut(s) 116, 167, 622, 671, 696, 938, 1225, 1430
Tsp45I GTSAC 2 cut(s) 364, 914
TspDTI ATGAA 3 cut(s) 494, 679, 1391
TspGWI ACGGA 3 cut(s) 440, 1477, 1506
TspRI CASTG 2 cut(s) 1150, 1359
Tth111I GACNNNGTC 1 cut(s) 1441
VpaK11BI GGWCC 3 cut(s) 95, 562, 805
XagI CCTNNNNNAGG 1 cut(s) 254
XceI RCATGY 3 cut(s) 1190, 1232, 1285
XmiI GTMKAC 2 cut(s) 792, 1062
XmnI GAANNNNTTC 2 cut(s) 1517, 1591
XspI CTAG 4 cut(s) 5, 752, 1464, 1578
ZraI GACGTC 1 cut(s) 1440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.