Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0042142.1

Orthogroup ID

OG0005865

Physical Location & Seq

Genomic Coordinates Reverse (-)

4146 .. 6009

Gene Structure 1864 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0042142.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1396 bp

gtattgcgagaacaaccttaccggccgtacagaagatttcctcactcaggtggccttgtccagcctctccggcgccattgtcgttctcaaatcatgcgaagacctcactcccatcgctgaagaactcaaaatcgttcagagatgtgtggaagtagtcacatccaaggttacaatcgaggcaaactttccgagccgctctccgacgaactggtggacggaggagctatcaattttggacattgatttcttcgggagagtaataacatccatgaaacaacgtgcttcgaagactctgaccgtatcgagtgcgatcgttacatacgccgagagatggctccgggatctgatccgggaccactccggagccggcaccaagtccttggagtccgacgactccgacatcagaatccggcagcgggagcttatacaatccatagtggctctccttccttccgagaaggcagctctgccgatcaacttcatctgctgccttctcaggtcagcgacgtttgtcaaggcctcgacggcgaccaagaacgagctagagaagtggatctcggcgatcttggagcacgtaaccgtcgacgacctgctggtcctgtcgtttagttacgacggcgagaggctgttcgatctggagagcgtgaggaggattatctcgggattcgtggagagggagaagagcgtggcggtttttaacgccggtgacttcagggaggtgtgctctgctgcaatgctcagagttgctaagactgtggatgcgtatctcggcgagatagccacttgtactgagcttagcatatccaagtttaatggcatcgccgtcctcatccccaaaggcgcgcgtaaagtcgacgacgatctctatcgtgccgttgatatttacttgaagtctcatccgaaccttgatgagatagagagggagaaagtgtgcagtgtaatggatgcgttgaagttatcatacgaagcgagattacatgcttcgcaaaataagcgtttgcctgtacagattgtgctgcatgcgctctatttcgaccagctcaagctgaggagcggtgaagacgagaacgacatgcaaatggatgctgtatcgaccagaaatcaggtacaggccgacgtgtcgttggctaaggagaatgaggcactgcgaacagagctgttgaagatgaagatgtacatttcggacataaaaaagactggaagtggtgtaggtgcaagtgcagcaacgacgtcgtctgggaaaggcggtgggcctcgaaagccgacgtttttctcgtccgtgtcgaagaaactgggaaagttgaatccgttcaaaaatgggtctaaggacaccttaaacattgatgattgtgtggacgttaccaagcctagaagaagaaggttttccatctcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

464

Amino Acids

51.61

Weight (kDa)

7.64

Isoelectric Point (pI)

33.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005865)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30520 AT2G30520 AT2G30520
fragaria_vesca	FvH4_3g40860 FvH4_3g40860 FvH4_3g40860 FvH4_3g40860
malus_domestica	MD03G1048900.v1.1 MD11G1051400.v1.1
prunus_persica	Prupe.6G039200_v2.0.a1 Prupe.6G039200_v2.0.a1
pyrus_communis	pycom03g03840 pycom11g04120
rosa_chinensis	RchiOBHm_Chr5g0073591
rosa_laevigata	RLG00000036398
rosa_multiflora	Rmu_co8263269.1_g000001 Rmu_co8430755.1_g000001 Rmu_sc0042142.1_g000002 Rmu_ssc0000242.1_g000005
rosa_roxburghii	Rroxscaffold_1G00007670
rosa_rugosa	Rorug05G0425200 Rorug05G0425300 Rorug05G0425400
rosa_samantha	Rh5AG482200 Rh5BG503000 Rh5CG526100 Rh5DG515200
rosa_wichuraiana	Rw5G044800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	594
AatII	GACGTC	1 cut(s)	1233
Acc36I	ACCTGC	1 cut(s)	598
AccB1I	GGYRCC	2 cut(s)	72, 369
AccBSI	CCGCTC	2 cut(s)	196, 1054
AccI	GTMKAC	2 cut(s)	583, 853
AccII	CGCG	2 cut(s)	843, 845
AccIII	TCCGGA	1 cut(s)	360
AciI	CCGC	5 cut(s)	194, 416, 690, 1054, 1246
AclWI	GGATC	3 cut(s)	341, 349, 561
AcoI	YGGCCR	1 cut(s)	23
AcuI	CTGAAG	2 cut(s)	139, 695
AcyI	GRCGYC	2 cut(s)	73, 1230
AfaI	GTAC	5 cut(s)	29, 788, 1006, 1108, 1176
AfiI	CCNNNNNNNGG	3 cut(s)	47, 331, 416
AflIII	ACRYGT	1 cut(s)	1117
AgsI	TTSAA	5 cut(s)	890, 953, 1163, 1304, 1313
AjiI	CACGTC	1 cut(s)	1118
AleI	CACNNNNGTG	1 cut(s)	48
AluBI	AGCT	8 cut(s)	224, 422, 465, 542, 794, 1040, 1046, 1157
AluI	AGCT	8 cut(s)	224, 422, 465, 542, 794, 1040, 1046, 1157
Alw21I	GWGCWC	2 cut(s)	574, 726
Alw26I	GTCTC	1 cut(s)	898
AlwI	GGATC	3 cut(s)	341, 349, 561
Ama87I	CYCGRG	1 cut(s)	659
Aor13HI	TCCGGA	1 cut(s)	360
AoxI	GGCC	5 cut(s)	23, 52, 517, 1111, 1251
ApeKI	GCWGC	6 cut(s)	413, 462, 487, 729, 1016, 1221
Asp700I	GAANNNNTTC	2 cut(s)	1308, 1382
AspLEI	GCGC	4 cut(s)	75, 843, 845, 1025
AspS9I	GGNCC	3 cut(s)	353, 596, 1251
AsuC2I	CCSGG	2 cut(s)	339, 351
AsuHPI	GGTGA	2 cut(s)	717, 1068
AsuII	TTCGAA	1 cut(s)	285
AvaI	CYCGRG	1 cut(s)	659
AvaII	GGWCC	2 cut(s)	353, 596
BanI	GGYRCC	2 cut(s)	72, 369
BarI	GAAGNNNNNNTAC	4 cut(s)	945, 958, 977, 990
BbsI	GAAGAC	3 cut(s)	106, 294, 1066
Bbv12I	GWGCWC	2 cut(s)	574, 726
BbvCI	CCTCAGC	1 cut(s)	1047
BbvI	GCAGC	6 cut(s)	425, 474, 474, 716, 1003, 1233
BccI	CCATC	3 cut(s)	120, 325, 1395
BceAI	ACGGC	5 cut(s)	10, 541, 632, 807, 858
BcgI	CGANNNNNNTGC	2 cut(s)	1213, 1247
BcnI	CCSGG	2 cut(s)	339, 351
BcoDI	GTCTC	1 cut(s)	898
BfaI	CTAG	2 cut(s)	543, 1369
BfoI	RGCGCY	1 cut(s)	76
BfuAI	ACCTGC	1 cut(s)	598
BglI	GCCNNNNNGGC	2 cut(s)	70, 525
BisI	GCNGC	7 cut(s)	194, 414, 463, 488, 730, 1017, 1222
BlpI	GCTNAGC	1 cut(s)	795
BlsI	GCNGC	7 cut(s)	195, 415, 464, 489, 731, 1018, 1223
Bme1390I	CCNGG	2 cut(s)	339, 351
Bme18I	GGWCC	2 cut(s)	353, 596
BmeT110I	CYCGRG	1 cut(s)	659
BmgBI	CACGTC	1 cut(s)	1118
BmgT120I	GGNCC	3 cut(s)	353, 596, 1251
BmiI	GGNNCC	5 cut(s)	74, 336, 354, 365, 371
BmrFI	CCNGG	2 cut(s)	339, 351
BmrI	ACTGGG	1 cut(s)	1302
BmsI	GCATC	4 cut(s)	749, 826, 935, 1073
BmuI	ACTGGG	1 cut(s)	1302
BoxI	GACNNNNGTC	1 cut(s)	510
BpiI	GAAGAC	3 cut(s)	106, 294, 1066
BplI	GAGNNNNNCTC	4 cut(s)	182, 214, 708, 740
BpmI	CTGGAG	1 cut(s)	657
Bpu10I	CCTNAGC	2 cut(s)	1047, 1129
Bpu1102I	GCTNAGC	1 cut(s)	795
Bpu14I	TTCGAA	1 cut(s)	285
BpuEI	CTTGAG	1 cut(s)	1026
BpuMI	CCSGG	2 cut(s)	339, 351
BsaAI	YACGTR	1 cut(s)	575
BsaBI	GATNNNNATC	2 cut(s)	763, 865
BsaHI	GRCGYC	2 cut(s)	73, 1230
BsaJI	CCNNGG	2 cut(s)	163, 379
BsaWI	WCCGGW	1 cut(s)	360
BsaXI	ACNNNNNCTCC	2 cut(s)	915, 945
Bsc4I	CCNNNNNNNGG	3 cut(s)	47, 331, 416
Bse118I	RCCGGY	3 cut(s)	21, 366, 702
Bse1I	ACTGG	3 cut(s)	213, 1202, 1297
Bse3DI	GCAATG	1 cut(s)	739
Bse8I	GATNNNNATC	2 cut(s)	763, 865
BseAI	TCCGGA	1 cut(s)	360
BseDI	CCNNGG	2 cut(s)	163, 379
BseGI	GGATG	7 cut(s)	159, 264, 764, 829, 896, 950, 1088
BseJI	GATNNNNATC	2 cut(s)	763, 865
BseLI	CCNNNNNNNGG	3 cut(s)	47, 331, 416
BseMI	GCAATG	1 cut(s)	739
BseMII	CTCAG	5 cut(s)	60, 509, 752, 781, 1038
BseNI	ACTGG	3 cut(s)	213, 1202, 1297
BsePI	GCGCGC	1 cut(s)	841
BseRI	GAGGAG	3 cut(s)	234, 662, 1064
BseX3I	CGGCCG	1 cut(s)	23
BseXI	GCAGC	6 cut(s)	425, 474, 474, 716, 1003, 1233
BsgI	GTGCAG	2 cut(s)	953, 1240
Bsh1236I	CGCG	2 cut(s)	843, 845
Bsh1285I	CGRYCG	2 cut(s)	26, 313
BshFI	GGCC	5 cut(s)	25, 54, 519, 1113, 1253
BshNI	GGYRCC	2 cut(s)	72, 369
BsiEI	CGRYCG	2 cut(s)	26, 313
BsiHKAI	GWGCWC	2 cut(s)	574, 726
BsiHKCI	CYCGRG	1 cut(s)	659
BsiSI	CCGG	8 cut(s)	22, 70, 338, 350, 361, 367, 410, 703
BslFI	GGGAC	1 cut(s)	366
BslI	CCNNNNNNNGG	3 cut(s)	47, 331, 416
BsmAI	GTCTC	1 cut(s)	898
BsmFI	GGGAC	1 cut(s)	366
BsnI	GGCC	5 cut(s)	25, 54, 519, 1113, 1253
BsoBI	CYCGRG	1 cut(s)	659
Bsp119I	TTCGAA	1 cut(s)	285
Bsp1286I	GDGCHC	2 cut(s)	574, 726
Bsp13I	TCCGGA	1 cut(s)	360
Bsp1407I	TGTACA	2 cut(s)	1004, 1174
Bsp143I	GATC	8 cut(s)	310, 341, 346, 472, 553, 562, 632, 860
Bsp1720I	GCTNAGC	1 cut(s)	795
BspACI	CCGC	5 cut(s)	194, 416, 690, 1054, 1246
BspANI	GGCC	5 cut(s)	25, 54, 519, 1113, 1253
BspCNI	CTCAG	5 cut(s)	59, 508, 751, 782, 1039
BspEI	TCCGGA	1 cut(s)	360
BspFNI	CGCG	2 cut(s)	843, 845
BspLI	GGNNCC	5 cut(s)	74, 336, 354, 365, 371
BspMI	ACCTGC	1 cut(s)	598
BspPI	GGATC	3 cut(s)	341, 349, 561
BspQI	GCTCTTC	1 cut(s)	675
BspT104I	TTCGAA	1 cut(s)	285
BspT107I	GGYRCC	2 cut(s)	72, 369
BsrBI	CCGCTC	2 cut(s)	196, 1054
BsrDI	GCAATG	1 cut(s)	739
BsrFI	RCCGGY	3 cut(s)	21, 366, 702
BsrGI	TGTACA	2 cut(s)	1004, 1174
BsrI	ACTGG	3 cut(s)	213, 1202, 1297
BssAI	RCCGGY	3 cut(s)	21, 366, 702
BssECI	CCNNGG	2 cut(s)	163, 379
BssHII	GCGCGC	1 cut(s)	841
BssMI	GATC	8 cut(s)	310, 341, 346, 472, 553, 562, 632, 860
BssNI	GRCGYC	2 cut(s)	73, 1230
BssT1I	CCWWGG	2 cut(s)	163, 379
Bst4CI	ACNGT	3 cut(s)	299, 581, 755
Bst6I	CTCTTC	1 cut(s)	675
BstACI	GRCGYC	2 cut(s)	73, 1230
BstAUI	TGTACA	2 cut(s)	1004, 1174
BstBAI	YACGTR	1 cut(s)	575
BstBI	TTCGAA	1 cut(s)	285
BstC8I	GCNNGC	3 cut(s)	368, 843, 1021
BstDEI	CTNAG	9 cut(s)	46, 495, 738, 748, 790, 795, 1047, 1129, 1324
BstENI	CCTNNNNNAGG	1 cut(s)	45
BstF5I	GGATG	7 cut(s)	159, 264, 764, 829, 896, 950, 1088
BstFNI	CGCG	2 cut(s)	843, 845
BstH2I	RGCGCY	1 cut(s)	76
BstHHI	GCGC	4 cut(s)	75, 843, 845, 1025
BstKTI	GATC	8 cut(s)	313, 344, 349, 475, 556, 565, 635, 863
BstMAI	GTCTC	1 cut(s)	898
BstMBI	GATC	8 cut(s)	310, 341, 346, 472, 553, 562, 632, 860
BstMCI	CGRYCG	2 cut(s)	26, 313
BstMWI	GCNNNNNNNGC	8 cut(s)	70, 419, 525, 992, 1022, 1154, 1221, 1259
BstNSI	RCATGY	3 cut(s)	981, 1023, 1076
BstPAI	GACNNNNGTC	1 cut(s)	510
BstSCI	CCNGG	2 cut(s)	337, 349
BstUI	CGCG	2 cut(s)	843, 845
BstV1I	GCAGC	6 cut(s)	425, 474, 474, 716, 1003, 1233
BstV2I	GAAGAC	3 cut(s)	106, 294, 1066
BstX2I	RGATCY	2 cut(s)	341, 553
BstXI	CCANNNNNNTGG	1 cut(s)	380
BstYI	RGATCY	2 cut(s)	341, 553
BstZI	CGGCCG	1 cut(s)	23
BsuRI	GGCC	5 cut(s)	25, 54, 519, 1113, 1253
BtgZI	GCGATG	2 cut(s)	98, 803
BtrI	CACGTC	1 cut(s)	1118
BtsCI	GGATG	7 cut(s)	159, 264, 764, 829, 896, 950, 1088
BtsI	GCAGTG	2 cut(s)	941, 1143
BtsIMutI	CAGTG	2 cut(s)	941, 1143
BveI	ACCTGC	1 cut(s)	598
Cac8I	GCNNGC	3 cut(s)	368, 843, 1021
CfoI	GCGC	4 cut(s)	75, 843, 845, 1025
Cfr10I	RCCGGY	3 cut(s)	21, 366, 702
Cfr13I	GGNCC	3 cut(s)	353, 596, 1251
Csp6I	GTAC	5 cut(s)	28, 787, 1005, 1107, 1175
CviAII	CATG	5 cut(s)	94, 269, 978, 1020, 1073
CviQI	GTAC	5 cut(s)	28, 787, 1005, 1107, 1175
DdeI	CTNAG	9 cut(s)	46, 495, 738, 748, 790, 795, 1047, 1129, 1324
DinI	GGCGCC	1 cut(s)	74
DpnI	GATC	8 cut(s)	312, 343, 348, 474, 555, 564, 634, 862
DpnII	GATC	8 cut(s)	310, 341, 346, 472, 553, 562, 632, 860
DrdI	GACNNNNNNGTC	1 cut(s)	594
DseDI	GACNNNNNNGTC	1 cut(s)	594
EaeI	YGGCCR	1 cut(s)	23
EagI	CGGCCG	1 cut(s)	23
Eam1104I	CTCTTC	1 cut(s)	675
EarI	CTCTTC	1 cut(s)	675
EclXI	CGGCCG	1 cut(s)	23
Eco130I	CCWWGG	2 cut(s)	163, 379
Eco147I	AGGCCT	1 cut(s)	519
Eco47I	GGWCC	2 cut(s)	353, 596
Eco52I	CGGCCG	1 cut(s)	23
Eco57I	CTGAAG	2 cut(s)	139, 695
Eco88I	CYCGRG	1 cut(s)	659
EcoNI	CCTNNNNNAGG	1 cut(s)	45
EcoT14I	CCWWGG	2 cut(s)	163, 379
EgeI	GGCGCC	1 cut(s)	74
EheI	GGCGCC	1 cut(s)	74
ErhI	CCWWGG	2 cut(s)	163, 379
FaeI	CATG	5 cut(s)	97, 272, 981, 1023, 1076
FalI	AAGNNNNNCTT	2 cut(s)	1317, 1349
FaqI	GGGAC	1 cut(s)	366
FatI	CATG	5 cut(s)	93, 268, 977, 1019, 1072
FauI	CCCGC	1 cut(s)	409
FblI	GTMKAC	2 cut(s)	583, 853
Fnu4HI	GCNGC	7 cut(s)	194, 414, 463, 488, 730, 1017, 1222
FokI	GGATG	7 cut(s)	146, 251, 771, 816, 883, 957, 1095
Fsp4HI	GCNGC	7 cut(s)	194, 414, 463, 488, 730, 1017, 1222
FspBI	CTAG	2 cut(s)	543, 1369
GlaI	GCGC	4 cut(s)	74, 842, 844, 1024
GluI	GCNGC	7 cut(s)	194, 414, 463, 488, 730, 1017, 1222
GsuI	CTGGAG	1 cut(s)	657
HaeII	RGCGCY	1 cut(s)	76
HaeIII	GGCC	5 cut(s)	25, 54, 519, 1113, 1253
HapII	CCGG	8 cut(s)	22, 70, 338, 350, 361, 367, 410, 703
HhaI	GCGC	4 cut(s)	75, 843, 845, 1025
Hin1I	GRCGYC	2 cut(s)	73, 1230
Hin1II	CATG	5 cut(s)	97, 272, 981, 1023, 1076
Hin6I	GCGC	4 cut(s)	73, 841, 843, 1023
HinP1I	GCGC	4 cut(s)	73, 841, 843, 1023
HincII	GTYRAC	2 cut(s)	584, 854
HindII	GTYRAC	2 cut(s)	584, 854
HinfI	GANTC	6 cut(s)	290, 384, 393, 406, 664, 1304
HpaII	CCGG	8 cut(s)	22, 70, 338, 350, 361, 367, 410, 703
HphI	GGTGA	2 cut(s)	717, 1068
Hpy166II	GTNNAC	4 cut(s)	214, 584, 854, 1355
Hpy188III	TCNNGA	4 cut(s)	251, 361, 636, 661
Hpy8I	GTNNAC	4 cut(s)	214, 584, 854, 1355
HpyAV	CCTTC	5 cut(s)	452, 456, 460, 501, 1372
HpyCH4III	ACNGT	3 cut(s)	299, 581, 755
HpyCH4IV	ACGT	7 cut(s)	278, 507, 574, 1117, 1230, 1266, 1357
HpyCH4V	TGCA	6 cut(s)	732, 934, 1019, 1076, 1215, 1221
HpyF10VI	GCNNNNNNNGC	8 cut(s)	70, 419, 525, 992, 1022, 1154, 1221, 1259
HpyF3I	CTNAG	9 cut(s)	46, 495, 738, 748, 790, 795, 1047, 1129, 1324
HpySE526I	ACGT	7 cut(s)	278, 507, 574, 1117, 1230, 1266, 1357
Hsp92I	GRCGYC	2 cut(s)	73, 1230
Hsp92II	CATG	5 cut(s)	97, 272, 981, 1023, 1076
HspAI	GCGC	4 cut(s)	73, 841, 843, 1023
KasI	GGCGCC	1 cut(s)	72
Kpn2I	TCCGGA	1 cut(s)	360
KroI	GCCGGC	1 cut(s)	366
KroNI	GCCGGC	1 cut(s)	368
Kzo9I	GATC	8 cut(s)	310, 341, 346, 472, 553, 562, 632, 860
LguI	GCTCTTC	1 cut(s)	675
LmnI	GCTCC	6 cut(s)	221, 340, 363, 419, 569, 1051
Lsp1109I	GCAGC	6 cut(s)	425, 474, 474, 716, 1003, 1233
LweI	GCATC	4 cut(s)	749, 826, 935, 1073
MaeI	CTAG	2 cut(s)	543, 1369
MaeII	ACGT	7 cut(s)	278, 507, 574, 1117, 1230, 1266, 1357
MaeIII	GTNAC	7 cut(s)	155, 167, 314, 575, 609, 705, 1358
MalI	GATC	8 cut(s)	312, 343, 348, 474, 555, 564, 634, 862
MbiI	CCGCTC	2 cut(s)	196, 1054
MboI	GATC	8 cut(s)	310, 341, 346, 472, 553, 562, 632, 860
MflI	RGATCY	2 cut(s)	341, 553
MhlI	GDGCHC	2 cut(s)	574, 726
MluCI	AATT	1 cut(s)	229
Mly113I	GGCGCC	1 cut(s)	73
MlyI	GAGTC	3 cut(s)	284, 387, 393
MmeI	TCCRAC	3 cut(s)	225, 412, 421
MroI	TCCGGA	1 cut(s)	360
MroNI	GCCGGC	1 cut(s)	366
MroXI	GAANNNNTTC	2 cut(s)	1308, 1382
MseI	TTAA	4 cut(s)	697, 811, 1335, 1394
MslI	CAYNNNNRTG	2 cut(s)	48, 1077
MspA1I	CMGCKG	1 cut(s)	416
MspI	CCGG	8 cut(s)	22, 70, 338, 350, 361, 367, 410, 703
MspR9I	CCNGG	2 cut(s)	339, 351
MvnI	CGCG	2 cut(s)	843, 845
MwoI	GCNNNNNNNGC	8 cut(s)	70, 419, 525, 992, 1022, 1154, 1221, 1259
NaeI	GCCGGC	1 cut(s)	368
NarI	GGCGCC	1 cut(s)	73
NciI	CCSGG	2 cut(s)	339, 351
NdeII	GATC	8 cut(s)	310, 341, 346, 472, 553, 562, 632, 860
NgoMIV	GCCGGC	1 cut(s)	366
NlaIII	CATG	5 cut(s)	97, 272, 981, 1023, 1076
NlaIV	GGNNCC	5 cut(s)	74, 336, 354, 365, 371
NmeAIII	GCCGAG	3 cut(s)	350, 537, 748
NmuCI	GTSAC	2 cut(s)	155, 705
NspI	RCATGY	3 cut(s)	981, 1023, 1076
NspV	TTCGAA	1 cut(s)	285
OliI	CACNNNNGTG	1 cut(s)	48
PaeI	GCATGC	1 cut(s)	1023
PauI	GCGCGC	1 cut(s)	841
PceI	AGGCCT	1 cut(s)	519
PciSI	GCTCTTC	1 cut(s)	675
PcsI	WCGNNNNNNNCGW	3 cut(s)	580, 1272, 1281
PdiI	GCCGGC	1 cut(s)	368
PdmI	GAANNNNTTC	2 cut(s)	1308, 1382
PfeI	GAWTC	3 cut(s)	406, 664, 1304
PflFI	GACNNNGTC	1 cut(s)	1232
PfoI	TCCNGGA	2 cut(s)	337, 349
PkrI	GCNGC	7 cut(s)	195, 415, 464, 489, 731, 1018, 1223
Ple19I	CGATCG	1 cut(s)	313
PleI	GAGTC	3 cut(s)	284, 387, 392
PluTI	GGCGCC	1 cut(s)	76
PpsI	GAGTC	3 cut(s)	284, 387, 392
Ppu21I	YACGTR	1 cut(s)	575
PshAI	GACNNNNGTC	1 cut(s)	510
PspN4I	GGNNCC	5 cut(s)	74, 336, 354, 365, 371
PspPI	GGNCC	3 cut(s)	353, 596, 1251
PsuI	RGATCY	2 cut(s)	341, 553
PsyI	GACNNNGTC	1 cut(s)	1232
PteI	GCGCGC	1 cut(s)	841
PvuI	CGATCG	1 cut(s)	313
RsaI	GTAC	5 cut(s)	29, 788, 1006, 1108, 1176
RsaNI	GTAC	5 cut(s)	28, 787, 1005, 1107, 1175
RseI	CAYNNNNRTG	2 cut(s)	48, 1077
SalI	GTCGAC	2 cut(s)	582, 852
SapI	GCTCTTC	1 cut(s)	675
SaqAI	TTAA	4 cut(s)	697, 811, 1335, 1394
SatI	GCNGC	7 cut(s)	194, 414, 463, 488, 730, 1017, 1222
Sau3AI	GATC	8 cut(s)	310, 341, 346, 472, 553, 562, 632, 860
Sau96I	GGNCC	3 cut(s)	353, 596, 1251
SchI	GAGTC	3 cut(s)	284, 387, 393
ScrFI	CCNGG	2 cut(s)	339, 351
SduI	GDGCHC	2 cut(s)	574, 726
SfaNI	GCATC	4 cut(s)	749, 826, 935, 1073
SfoI	GGCGCC	1 cut(s)	74
SfuI	TTCGAA	1 cut(s)	285
SgrAI	CRCCGGYG	1 cut(s)	702
SgrDI	CGTCGACG	1 cut(s)	582
SinI	GGWCC	2 cut(s)	353, 596
SmiMI	CAYNNNNRTG	2 cut(s)	48, 1077
SmlI	CTYRAG	1 cut(s)	1041
SmoI	CTYRAG	1 cut(s)	1041
SphI	GCATGC	1 cut(s)	1023
Sse9I	AATT	1 cut(s)	229
SseBI	AGGCCT	1 cut(s)	519
SsiI	CCGC	5 cut(s)	194, 416, 690, 1054, 1246
SspDI	GGCGCC	1 cut(s)	72
SspMI	CTAG	2 cut(s)	543, 1369
StuI	AGGCCT	1 cut(s)	519
StyD4I	CCNGG	2 cut(s)	337, 349
StyI	CCWWGG	2 cut(s)	163, 379
TaaI	ACNGT	3 cut(s)	299, 581, 755
TaiI	ACGT	7 cut(s)	281, 510, 577, 1120, 1233, 1269, 1360
TasI	AATT	1 cut(s)	229
TatI	WGTACW	3 cut(s)	786, 1004, 1174
TauI	GCSGC	1 cut(s)	196
TfiI	GAWTC	3 cut(s)	406, 664, 1304
Tru1I	TTAA	4 cut(s)	697, 811, 1335, 1394
Tru9I	TTAA	4 cut(s)	697, 811, 1335, 1394
TscAI	CASTG	2 cut(s)	941, 1150
TseFI	GTSAC	2 cut(s)	155, 705
TseI	GCWGC	6 cut(s)	413, 462, 487, 729, 1016, 1221
Tsp45I	GTSAC	2 cut(s)	155, 705
TspDTI	ATGAA	3 cut(s)	285, 470, 1182
TspGWI	ACGGA	3 cut(s)	231, 1268, 1297
TspRI	CASTG	2 cut(s)	941, 1150
Tth111I	GACNNNGTC	1 cut(s)	1232
VpaK11BI	GGWCC	2 cut(s)	353, 596
XagI	CCTNNNNNAGG	1 cut(s)	45
XceI	RCATGY	3 cut(s)	981, 1023, 1076
XmiI	GTMKAC	2 cut(s)	583, 853
XmnI	GAANNNNTTC	2 cut(s)	1308, 1382
XspI	CTAG	2 cut(s)	543, 1369
ZraI	GACGTC	1 cut(s)	1231

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.