Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0005865

Physical Location & Seq

Genomic Coordinates Forward (+)

3229208 .. 3232315

Gene Structure 3108 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g04120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGGCTTCCCCTCTCAATGGCAGCAACAGGCTCTCCCTTGCCATGGAGCGCACTGGCCAATGGATTTTCTCTCAAGATATCCCGTCAGATGTTGTGGTTCAAGTTGGTGAAGCCAATTTCTCTCTACACAAGTTCATGCTTGTGGCGAAAAGCAACCGCATAAGGAAACTAATAATGGAGTCAAAACAACCGGACCTAACGAGAATCGACCTCTCCGACGTTCCCGGAGGCCCGGAGACGTTCGAGAAGGCGGCCAAGTTCTGCTACGGCGTCAACTTCGAGATCACAGTCCACAACGTCGCCGCCCTCCGCTGCGCGGCGGAGTATTTGGAAATGACCAATAAGTACTGCGACAACAACCTCATCGGCCGCACTGAAGATTTCTTATCTCAAGTCGCTCTCATGAGCCTCTCCGGCGCCATTGTCGTGCTCAAGTCCTGCGAAGACCTCCTTCCCATGGCGGAGGACCTCAAAATCGTACAGAAATGCGTCGATGTCGCCACTTCCAAGGTCTCAATCGAAGCAAAATTTCCGAGTCGATCGCCGACGAATTGGTGGACAGAGGAATTGTCGATTTTGGACATTGAGTTCTTCGGCAGAGTTATCTCCGCGATGAAGCTGCGCGGGGGGAAATCATTGACCGTTTCCAGCGCTATCATAACTTACGCTGAGAAATGGCTCCGAGATATCGTCCGAGACCGCTCTGGACCCGCCGCGAAATTGGCCGCTTCGGACGACTCCGAACTGAGACTCCAACAACGGGAGCTTCTAGAATCGATCGTCGCGATCTTACCAACTGAGAAAGCTGCTATGCCGATCAACTTCCTCTGCTGCCTTCTCAGATCTGCGACCTTCGTCAAGGCGTCCAGCACGTGCAAGACCGAGCTCGAGAGGCGGATCTCGTCGGTCCTGGAGCACGTGACAGTCGACGACCTCCTGGTGCTGTCGTTCACCTACGACGGCGAGAGGCTCTTCGATCTCGAGAGCGTGAGGAGGATTATCTCCGGGTTCTTGGAGAAGGAGAAGAGCGTCGCGGTCTTCAACGCCGGTGATTTCAGGGAGGTTTGCTCGGCGGAGATGATCAGAGTCGCGAAGACTGTCGACGCGTATCTTGGTGAGATCGCCACGTGTGTTGAGCTCAGTATCTCGAAGTTCAATGGCATTGCCAACCTCATCCCCAAAGGCGCGCGTAAAGTCGACGATGATCTCTATCGTGCCATTGATATTTACTTGAAGGCTCATCCGAACCTTGATGAGATAGAGAGGGAGAAGGTGTGCAGCGTAATGGATGCATTGAAGTTGTCATACGAAGCGAGAGTCCACGCTTCGCAAAACAAACGACTCCCAGTTCAAATCGTACTGCACGCGTTGTATTACGACCAGCTAAAGCTGAGGAGCGGGGTGGACGAAAACGACGTGCAAGACGCAGTAACGACGAGGAGTCAGGTGCAACATGACGTCTCGTTGGCGAGGGAGAACGAGGAGTTGAGAACGGAGTTGTTGAAGATGAAGATGTACATTACGAACCTGCAGAAGACTGGTTCTGCAGGGATTGCAACGACATCATCTGGTAAAGGAGGTGGCGGGCCCAAAAAGGCCACATTTTTCTCGTCTGTGTCGAAGAAATTGGGGAAGTTGAATCCCTTCAAGCAAGGGTCGAAGGACACATCGAATATCATGGATGAGGGTGTGGATATAAACAAGCCTAGAAGGAGAAGGTTTTCTATTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

578

Amino Acids

64.21

Weight (kDa)

7.89

Isoelectric Point (pI)

40.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	24 - 114	2e-08	BTB/POZ domain
NPH3	PF03000	184 - 438	1.1e-79	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005865)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30520 AT2G30520 AT2G30520
fragaria_vesca	FvH4_3g40860 FvH4_3g40860 FvH4_3g40860 FvH4_3g40860
malus_domestica	MD03G1048900.v1.1 MD11G1051400.v1.1
prunus_persica	Prupe.6G039200_v2.0.a1 Prupe.6G039200_v2.0.a1
pyrus_communis	pycom03g03840 pycom11g04120
rosa_chinensis	RchiOBHm_Chr5g0073591
rosa_laevigata	RLG00000036398
rosa_multiflora	Rmu_co8263269.1_g000001 Rmu_co8430755.1_g000001 Rmu_sc0042142.1_g000002 Rmu_ssc0000242.1_g000005
rosa_roxburghii	Rroxscaffold_1G00007670
rosa_rugosa	Rorug05G0425200 Rorug05G0425300 Rorug05G0425400
rosa_samantha	Rh5AG482200 Rh5BG503000 Rh5CG526100 Rh5DG515200
rosa_wichuraiana	Rw5G044800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1461
Acc36I	ACCTGC	1 cut(s)	1536
AccB1I	GGYRCC	1 cut(s)	416
AccBSI	CCGCTC	2 cut(s)	702, 1398
AccI	GTMKAC	3 cut(s)	927, 1101, 1197
AclWI	GGATC	1 cut(s)	905
AcoI	YGGCCR	4 cut(s)	55, 252, 367, 723
AcsI	RAATTY	1 cut(s)	527
AcuI	CTGAAG	1 cut(s)	396
AcvI	CACGTG	3 cut(s)	873, 919, 1128
AcyI	GRCGYC	4 cut(s)	270, 417, 863, 1458
AfaI	GTAC	4 cut(s)	347, 480, 1359, 1517
AfeI	AGCGCT	1 cut(s)	652
AfiI	CCNNNNNNNGG	5 cut(s)	17, 43, 316, 457, 760
AflIII	ACRYGT	3 cut(s)	1104, 1127, 1365
AgsI	TTSAA	9 cut(s)	101, 1042, 1156, 1234, 1297, 1352, 1504, 1639, 1648
AhdI	GACNNNNNGTC	1 cut(s)	1440
AjiI	CACGTC	1 cut(s)	1417
AjnI	CCWGG	2 cut(s)	909, 936
AloI	GAACNNNNNNTCC	4 cut(s)	572, 604, 735, 767
AluBI	AGCT	7 cut(s)	619, 766, 806, 886, 1138, 1384, 1390
AluI	AGCT	7 cut(s)	619, 766, 806, 886, 1138, 1384, 1390
Alw21I	GWGCWC	4 cut(s)	432, 888, 918, 1140
Alw26I	GTCTC	5 cut(s)	230, 517, 690, 742, 1465
AlwI	GGATC	1 cut(s)	905
Ama87I	CYCGRG	2 cut(s)	887, 980
Aor51HI	AGCGCT	1 cut(s)	652
AoxI	GGCC	7 cut(s)	55, 229, 252, 367, 723, 1586, 1596
ApaI	GGGCCC	1 cut(s)	1590
ApeKI	GCWGC	6 cut(s)	21, 312, 619, 806, 831, 1278
ApoI	RAATTY	1 cut(s)	527
ArsI	GACNNNNNNTTYG	2 cut(s)	1302, 1334
Asp700I	GAANNNNTTC	2 cut(s)	1643, 1720
AspLEI	GCGC	7 cut(s)	51, 317, 419, 624, 653, 1187, 1189
AspS9I	GGNCC	7 cut(s)	193, 230, 466, 707, 907, 1586, 1587
AsuC2I	CCSGG	3 cut(s)	225, 233, 1006
AsuHPI	GGTGA	4 cut(s)	119, 943, 1061, 1127
AvaI	CYCGRG	2 cut(s)	887, 980
AvaII	GGWCC	4 cut(s)	193, 466, 707, 907
BaeGI	GKGCMC	1 cut(s)	1590
BalI	TGGCCA	1 cut(s)	57
BanI	GGYRCC	1 cut(s)	416
BanII	GRGCYC	3 cut(s)	888, 1140, 1590
BarI	GAAGNNNNNNTAC	2 cut(s)	1289, 1321
BbrPI	CACGTG	3 cut(s)	873, 919, 1128
BbsI	GAAGAC	4 cut(s)	450, 1030, 1100, 1541
Bbv12I	GWGCWC	4 cut(s)	432, 888, 918, 1140
BbvCI	CCTCAGC	1 cut(s)	1391
BbvI	GCAGC	6 cut(s)	33, 299, 606, 793, 818, 1290
BceAI	ACGGC	2 cut(s)	283, 976
BcgI	CGANNNNNNTGC	2 cut(s)	601, 635
BciT130I	CCWGG	2 cut(s)	911, 938
BclI	TGATCA	1 cut(s)	1080
BcnI	CCSGG	3 cut(s)	225, 233, 1006
BcoDI	GTCTC	5 cut(s)	230, 517, 690, 742, 1465
BfaI	CTAG	2 cut(s)	770, 1707
BfmI	CTRYAG	2 cut(s)	1529, 1545
BfoI	RGCGCY	2 cut(s)	420, 654
BfuAI	ACCTGC	1 cut(s)	1536
BglI	GCCNNNNNGGC	1 cut(s)	414
BglII	AGATCT	1 cut(s)	842
BmcAI	AGTACT	1 cut(s)	347
Bme1390I	CCNGG	5 cut(s)	225, 233, 911, 938, 1006
Bme18I	GGWCC	4 cut(s)	193, 466, 707, 907
BmeRI	GACNNNNNGTC	1 cut(s)	1440
BmeT110I	CYCGRG	2 cut(s)	887, 980
BmgBI	CACGTC	1 cut(s)	1417
BmgT120I	GGNCC	7 cut(s)	193, 230, 466, 707, 907, 1586, 1587
BmiI	GGNNCC	4 cut(s)	418, 680, 709, 1588
BmrFI	CCNGG	5 cut(s)	225, 233, 911, 938, 1006
BmrI	ACTGGG	1 cut(s)	1340
BmsI	GCATC	1 cut(s)	1279
BmuI	ACTGGG	1 cut(s)	1340
BoxI	GACNNNNGTC	1 cut(s)	854
BpiI	GAAGAC	4 cut(s)	450, 1030, 1100, 1541
BplI	GAGNNNNNCTC	2 cut(s)	1052, 1084
BpmI	CTGGAG	1 cut(s)	932
Bpu10I	CCTNAGC	1 cut(s)	1391
BpuEI	CTTGAG	3 cut(s)	57, 375, 416
BpuMI	CCSGG	3 cut(s)	225, 233, 1006
Bsa29I	ATCGAT	1 cut(s)	776
BsaAI	YACGTR	3 cut(s)	873, 919, 1128
BsaBI	GATNNNNATC	1 cut(s)	1209
BsaHI	GRCGYC	4 cut(s)	270, 417, 863, 1458
BsaI	GGTCTC	2 cut(s)	517, 690
BsaJI	CCNNGG	3 cut(s)	42, 456, 507
BsaWI	WCCGGW	1 cut(s)	190
BsaXI	ACNNNNNCTCC	6 cut(s)	17, 47, 735, 765, 1259, 1289
Bsc4I	CCNNNNNNNGG	5 cut(s)	17, 43, 316, 457, 760
Bse118I	RCCGGY	1 cut(s)	1046
Bse1I	ACTGG	3 cut(s)	58, 1346, 1543
Bse3DI	GCAATG	1 cut(s)	1161
Bse8I	GATNNNNATC	1 cut(s)	1209
BseBI	CCWGG	2 cut(s)	911, 938
BseCI	ATCGAT	1 cut(s)	776
BseDI	CCNNGG	3 cut(s)	42, 456, 507
BseGI	GGATG	4 cut(s)	1173, 1240, 1294, 1687
BseJI	GATNNNNATC	1 cut(s)	1209
BseLI	CCNNNNNNNGG	5 cut(s)	17, 43, 316, 457, 760
BseMI	GCAATG	1 cut(s)	1161
BseMII	CTCAG	6 cut(s)	660, 737, 789, 853, 1153, 1382
BseNI	ACTGG	3 cut(s)	58, 1346, 1543
BsePI	GCGCGC	1 cut(s)	1185
BseRI	GAGGAG	4 cut(s)	1006, 1408, 1453, 1496
BseSI	GKGCMC	1 cut(s)	1590
BseX3I	CGGCCG	1 cut(s)	367
BseXI	GCAGC	6 cut(s)	33, 299, 606, 793, 818, 1290
BsgI	GTGCAG	2 cut(s)	1297, 1346
Bsh1285I	CGRYCG	3 cut(s)	370, 542, 780
BshFI	GGCC	7 cut(s)	57, 231, 254, 369, 725, 1588, 1598
BshNI	GGYRCC	1 cut(s)	416
BshVI	ATCGAT	1 cut(s)	776
BsiEI	CGRYCG	3 cut(s)	370, 542, 780
BsiHKAI	GWGCWC	4 cut(s)	432, 888, 918, 1140
BsiHKCI	CYCGRG	2 cut(s)	887, 980
BsiSI	CCGG	6 cut(s)	191, 225, 233, 414, 1005, 1047
BslI	CCNNNNNNNGG	5 cut(s)	17, 43, 316, 457, 760
BsmAI	GTCTC	5 cut(s)	230, 517, 690, 742, 1465
BsmBI	CGTCTC	2 cut(s)	230, 1465
BsnI	GGCC	7 cut(s)	57, 231, 254, 369, 725, 1588, 1598
Bso31I	GGTCTC	2 cut(s)	517, 690
BsoBI	CYCGRG	2 cut(s)	887, 980
Bsp120I	GGGCCC	1 cut(s)	1586
Bsp1286I	GDGCHC	5 cut(s)	432, 888, 918, 1140, 1590
Bsp1407I	TGTACA	1 cut(s)	1515
Bsp19I	CCATGG	2 cut(s)	42, 456
Bsp68I	TCGCGA	2 cut(s)	785, 1091
BspANI	GGCC	7 cut(s)	57, 231, 254, 369, 725, 1588, 1598
BspCNI	CTCAG	6 cut(s)	661, 738, 790, 852, 1152, 1383
BspDI	ATCGAT	1 cut(s)	776
BspHI	TCATGA	1 cut(s)	402
BspLI	GGNNCC	4 cut(s)	418, 680, 709, 1588
BspMAI	CTGCAG	2 cut(s)	1533, 1549
BspMI	ACCTGC	1 cut(s)	1536
BspPI	GGATC	1 cut(s)	905
BspQI	GCTCTTC	2 cut(s)	977, 1019
BspT107I	GGYRCC	1 cut(s)	416
BspTNI	GGTCTC	2 cut(s)	517, 690
BsrBI	CCGCTC	2 cut(s)	702, 1398
BsrDI	GCAATG	1 cut(s)	1161
BsrFI	RCCGGY	1 cut(s)	1046
BsrGI	TGTACA	1 cut(s)	1515
BsrI	ACTGG	3 cut(s)	58, 1346, 1543
BssAI	RCCGGY	1 cut(s)	1046
BssECI	CCNNGG	3 cut(s)	42, 456, 507
BssHII	GCGCGC	1 cut(s)	1185
BssNI	GRCGYC	4 cut(s)	270, 417, 863, 1458
BssT1I	CCWWGG	3 cut(s)	42, 456, 507
Bst2UI	CCWGG	2 cut(s)	911, 938
Bst4CI	ACNGT	4 cut(s)	289, 643, 925, 1099
Bst6I	CTCTTC	2 cut(s)	977, 1019
BstACI	GRCGYC	4 cut(s)	270, 417, 863, 1458
BstAPI	GCANNNNNTGC	1 cut(s)	1553
BstAUI	TGTACA	1 cut(s)	1515
BstBAI	YACGTR	3 cut(s)	873, 919, 1128
BstC8I	GCNNGC	3 cut(s)	1187, 1365, 1586
BstDEI	CTNAG	6 cut(s)	669, 746, 798, 839, 1139, 1391
BstDSI	CCRYGG	2 cut(s)	42, 456
BstF5I	GGATG	4 cut(s)	1173, 1240, 1294, 1687
BstH2I	RGCGCY	2 cut(s)	420, 654
BstHHI	GCGC	7 cut(s)	51, 317, 419, 624, 653, 1187, 1189
BstMAI	GTCTC	5 cut(s)	230, 517, 690, 742, 1465
BstMCI	CGRYCG	3 cut(s)	370, 542, 780
BstMWI	GCNNNNNNNGC	4 cut(s)	414, 722, 892, 1553
BstNI	CCWGG	2 cut(s)	911, 938
BstPAI	GACNNNNGTC	1 cut(s)	854
BstSCI	CCNGG	5 cut(s)	223, 231, 909, 936, 1004
BstSFI	CTRYAG	2 cut(s)	1529, 1545
BstSLI	GKGCMC	1 cut(s)	1590
BstV1I	GCAGC	6 cut(s)	33, 299, 606, 793, 818, 1290
BstV2I	GAAGAC	4 cut(s)	450, 1030, 1100, 1541
BstX2I	RGATCY	2 cut(s)	842, 897
BstYI	RGATCY	2 cut(s)	842, 897
BstZI	CGGCCG	1 cut(s)	367
Bsu15I	ATCGAT	1 cut(s)	776
BsuRI	GGCC	7 cut(s)	57, 231, 254, 369, 725, 1588, 1598
BsuTUI	ATCGAT	1 cut(s)	776
BtgI	CCRYGG	2 cut(s)	42, 456
BtgZI	GCGATG	1 cut(s)	626
BtrI	CACGTC	1 cut(s)	1417
BtsCI	GGATG	4 cut(s)	1173, 1240, 1294, 1687
BtsIMutI	CAGTG	2 cut(s)	51, 372
BtuMI	TCGCGA	2 cut(s)	785, 1091
BveI	ACCTGC	1 cut(s)	1536
Cac8I	GCNNGC	3 cut(s)	1187, 1365, 1586
CciI	TCATGA	1 cut(s)	402
CfoI	GCGC	7 cut(s)	51, 317, 419, 624, 653, 1187, 1189
Cfr10I	RCCGGY	1 cut(s)	1046
Cfr13I	GGNCC	7 cut(s)	193, 230, 466, 707, 907, 1586, 1587
ClaI	ATCGAT	1 cut(s)	776
CseI	GACGC	6 cut(s)	259, 478, 852, 1018, 1112, 1433
Csp6I	GTAC	4 cut(s)	346, 479, 1358, 1516
CspCI	CAANNNNNGTGG	2 cut(s)	1114, 1149
CviAII	CATG	6 cut(s)	43, 136, 403, 457, 1454, 1678
CviQI	GTAC	4 cut(s)	346, 479, 1358, 1516
DdeI	CTNAG	6 cut(s)	669, 746, 798, 839, 1139, 1391
DinI	GGCGCC	1 cut(s)	418
DriI	GACNNNNNGTC	1 cut(s)	1440
EaeI	YGGCCR	4 cut(s)	55, 252, 367, 723
EagI	CGGCCG	1 cut(s)	367
Eam1104I	CTCTTC	2 cut(s)	977, 1019
Eam1105I	GACNNNNNGTC	1 cut(s)	1440
EarI	CTCTTC	2 cut(s)	977, 1019
EciI	GGCGGA	4 cut(s)	335, 476, 910, 1088
Ecl136II	GAGCTC	2 cut(s)	886, 1138
EclXI	CGGCCG	1 cut(s)	367
Eco130I	CCWWGG	3 cut(s)	42, 456, 507
Eco24I	GRGCYC	3 cut(s)	888, 1140, 1590
Eco31I	GGTCTC	2 cut(s)	517, 690
Eco32I	GATATC	2 cut(s)	79, 688
Eco47I	GGWCC	4 cut(s)	193, 466, 707, 907
Eco47III	AGCGCT	1 cut(s)	652
Eco52I	CGGCCG	1 cut(s)	367
Eco53kI	GAGCTC	2 cut(s)	886, 1138
Eco57I	CTGAAG	1 cut(s)	396
Eco72I	CACGTG	3 cut(s)	873, 919, 1128
Eco88I	CYCGRG	2 cut(s)	887, 980
EcoICRI	GAGCTC	2 cut(s)	886, 1138
EcoO109I	RGGNCCY	1 cut(s)	466
EcoRII	CCWGG	2 cut(s)	909, 936
EcoRV	GATATC	2 cut(s)	79, 688
EcoT14I	CCWWGG	3 cut(s)	42, 456, 507
EcoT22I	ATGCAT	1 cut(s)	1294
EcoT38I	GRGCYC	3 cut(s)	888, 1140, 1590
EgeI	GGCGCC	1 cut(s)	418
EheI	GGCGCC	1 cut(s)	418
ErhI	CCWWGG	3 cut(s)	42, 456, 507
Esp3I	CGTCTC	2 cut(s)	230, 1465
FaeI	CATG	6 cut(s)	46, 139, 406, 460, 1457, 1681
FalI	AAGNNNNNCTT	2 cut(s)	435, 467
FatI	CATG	6 cut(s)	42, 135, 402, 456, 1453, 1677
FauI	CCCGC	4 cut(s)	617, 718, 1391, 1577
FbaI	TGATCA	1 cut(s)	1080
FblI	GTMKAC	3 cut(s)	927, 1101, 1197
FokI	GGATG	4 cut(s)	1160, 1227, 1301, 1694
FriOI	GRGCYC	3 cut(s)	888, 1140, 1590
FspBI	CTAG	2 cut(s)	770, 1707
GlaI	GCGC	7 cut(s)	50, 316, 418, 623, 652, 1186, 1188
GsuI	CTGGAG	1 cut(s)	932
HaeII	RGCGCY	2 cut(s)	420, 654
HaeIII	GGCC	7 cut(s)	57, 231, 254, 369, 725, 1588, 1598
HapII	CCGG	6 cut(s)	191, 225, 233, 414, 1005, 1047
HgaI	GACGC	6 cut(s)	259, 478, 852, 1018, 1112, 1433
HhaI	GCGC	7 cut(s)	51, 317, 419, 624, 653, 1187, 1189
Hin1I	GRCGYC	4 cut(s)	270, 417, 863, 1458
Hin1II	CATG	6 cut(s)	46, 139, 406, 460, 1457, 1681
Hin6I	GCGC	7 cut(s)	49, 315, 417, 622, 651, 1185, 1187
HinP1I	GCGC	7 cut(s)	49, 315, 417, 622, 651, 1185, 1187
HincII	GTYRAC	4 cut(s)	274, 928, 1102, 1198
HindII	GTYRAC	4 cut(s)	274, 928, 1102, 1198
HpaII	CCGG	6 cut(s)	191, 225, 233, 414, 1005, 1047
HphI	GGTGA	4 cut(s)	119, 943, 1061, 1127
Hpy166II	GTNNAC	9 cut(s)	274, 292, 558, 928, 951, 1102, 1198, 1321, 1405
Hpy8I	GTNNAC	9 cut(s)	274, 292, 558, 928, 951, 1102, 1198, 1321, 1405
HpyCH4III	ACNGT	4 cut(s)	289, 643, 925, 1099
HpyCH4IV	ACGT	8 cut(s)	219, 239, 297, 872, 918, 1127, 1416, 1458
HpyCH4V	TGCA	9 cut(s)	876, 1278, 1292, 1363, 1420, 1450, 1531, 1547, 1556
HpyF10VI	GCNNNNNNNGC	4 cut(s)	414, 722, 892, 1553
HpyF3I	CTNAG	6 cut(s)	669, 746, 798, 839, 1139, 1391
HpySE526I	ACGT	8 cut(s)	219, 239, 297, 872, 918, 1127, 1416, 1458
Hsp92I	GRCGYC	4 cut(s)	270, 417, 863, 1458
Hsp92II	CATG	6 cut(s)	46, 139, 406, 460, 1457, 1681
HspAI	GCGC	7 cut(s)	49, 315, 417, 622, 651, 1185, 1187
KasI	GGCGCC	1 cut(s)	416
Ksp22I	TGATCA	1 cut(s)	1080
LguI	GCTCTTC	2 cut(s)	977, 1019
LmnI	GCTCC	5 cut(s)	46, 684, 763, 913, 1395
Lsp1109I	GCAGC	6 cut(s)	33, 299, 606, 793, 818, 1290
LweI	GCATC	1 cut(s)	1279
MaeI	CTAG	2 cut(s)	770, 1707
MaeII	ACGT	8 cut(s)	219, 239, 297, 872, 918, 1127, 1416, 1458
MaeIII	GTNAC	2 cut(s)	919, 1429
MbiI	CCGCTC	2 cut(s)	702, 1398
MflI	RGATCY	2 cut(s)	842, 897
MhlI	GDGCHC	5 cut(s)	432, 888, 918, 1140, 1590
MlsI	TGGCCA	1 cut(s)	57
MluCI	AATT	6 cut(s)	115, 527, 550, 566, 719, 1625
MluI	ACGCGT	2 cut(s)	1104, 1365
MluNI	TGGCCA	1 cut(s)	57
Mly113I	GGCGCC	1 cut(s)	417
MlyI	GAGTC	8 cut(s)	188, 544, 731, 744, 1095, 1326, 1335, 1450
MmeI	TCCRAC	2 cut(s)	240, 778
Mox20I	TGGCCA	1 cut(s)	57
Mph1103I	ATGCAT	1 cut(s)	1294
MroXI	GAANNNNTTC	2 cut(s)	1643, 1720
MscI	TGGCCA	1 cut(s)	57
MseI	TTAA	1 cut(s)	1732
MslI	CAYNNNNRTG	2 cut(s)	140, 425
Msp20I	TGGCCA	1 cut(s)	57
MspA1I	CMGCKG	1 cut(s)	312
MspI	CCGG	6 cut(s)	191, 225, 233, 414, 1005, 1047
MspR9I	CCNGG	5 cut(s)	225, 233, 911, 938, 1006
MvaI	CCWGG	2 cut(s)	911, 938
MwoI	GCNNNNNNNGC	4 cut(s)	414, 722, 892, 1553
NarI	GGCGCC	1 cut(s)	417
NciI	CCSGG	3 cut(s)	225, 233, 1006
NcoI	CCATGG	2 cut(s)	42, 456
NlaIII	CATG	6 cut(s)	46, 139, 406, 460, 1457, 1681
NlaIV	GGNNCC	4 cut(s)	418, 680, 709, 1588
NmeAIII	GCCGAG	1 cut(s)	1049
NmuCI	GTSAC	1 cut(s)	919
NruI	TCGCGA	2 cut(s)	785, 1091
NsiI	ATGCAT	1 cut(s)	1294
PaeR7I	CTCGAG	2 cut(s)	887, 980
PagI	TCATGA	1 cut(s)	402
PauI	GCGCGC	1 cut(s)	1185
PciSI	GCTCTTC	2 cut(s)	977, 1019
PcsI	WCGNNNNNNNCGW	5 cut(s)	213, 782, 924, 1413, 1616
PdmI	GAANNNNTTC	2 cut(s)	1643, 1720
PfeI	GAWTC	3 cut(s)	204, 773, 1639
PfoI	TCCNGGA	2 cut(s)	223, 909
Ple19I	CGATCG	2 cut(s)	542, 780
PleI	GAGTC	8 cut(s)	187, 543, 731, 744, 1094, 1325, 1335, 1449
PluTI	GGCGCC	1 cut(s)	420
PmaCI	CACGTG	3 cut(s)	873, 919, 1128
PmlI	CACGTG	3 cut(s)	873, 919, 1128
PpsI	GAGTC	8 cut(s)	187, 543, 731, 744, 1094, 1325, 1335, 1449
Ppu21I	YACGTR	3 cut(s)	873, 919, 1128
PpuMI	RGGWCCY	1 cut(s)	466
PshAI	GACNNNNGTC	1 cut(s)	854
Psp124BI	GAGCTC	2 cut(s)	888, 1140
Psp5II	RGGWCCY	1 cut(s)	466
Psp6I	CCWGG	2 cut(s)	909, 936
PspCI	CACGTG	3 cut(s)	873, 919, 1128
PspGI	CCWGG	2 cut(s)	909, 936
PspN4I	GGNNCC	4 cut(s)	418, 680, 709, 1588
PspOMI	GGGCCC	1 cut(s)	1586
PspPI	GGNCC	7 cut(s)	193, 230, 466, 707, 907, 1586, 1587
PspPPI	RGGWCCY	1 cut(s)	466
PstI	CTGCAG	2 cut(s)	1533, 1549
PsuI	RGATCY	2 cut(s)	842, 897
PteI	GCGCGC	1 cut(s)	1185
PvuI	CGATCG	2 cut(s)	542, 780
RruI	TCGCGA	2 cut(s)	785, 1091
RsaI	GTAC	4 cut(s)	347, 480, 1359, 1517
RsaNI	GTAC	4 cut(s)	346, 479, 1358, 1516
RseI	CAYNNNNRTG	2 cut(s)	140, 425
SacI	GAGCTC	2 cut(s)	888, 1140
SalI	GTCGAC	3 cut(s)	926, 1100, 1196
SapI	GCTCTTC	2 cut(s)	977, 1019
SaqAI	TTAA	1 cut(s)	1732
Sau96I	GGNCC	7 cut(s)	193, 230, 466, 707, 907, 1586, 1587
ScaI	AGTACT	1 cut(s)	347
SchI	GAGTC	8 cut(s)	188, 544, 731, 744, 1095, 1326, 1335, 1450
ScrFI	CCNGG	5 cut(s)	225, 233, 911, 938, 1006
SduI	GDGCHC	5 cut(s)	432, 888, 918, 1140, 1590
SfaNI	GCATC	1 cut(s)	1279
SfcI	CTRYAG	2 cut(s)	1529, 1545
SfoI	GGCGCC	1 cut(s)	418
Sfr274I	CTCGAG	2 cut(s)	887, 980
SgrAI	CRCCGGYG	1 cut(s)	1046
SinI	GGWCC	4 cut(s)	193, 466, 707, 907
SlaI	CTCGAG	2 cut(s)	887, 980
SmiMI	CAYNNNNRTG	2 cut(s)	140, 425
SmlI	CTYRAG	5 cut(s)	72, 390, 431, 887, 980
SmoI	CTYRAG	5 cut(s)	72, 390, 431, 887, 980
Sse9I	AATT	6 cut(s)	115, 527, 550, 566, 719, 1625
SspDI	GGCGCC	1 cut(s)	416
SspMI	CTAG	2 cut(s)	770, 1707
SstI	GAGCTC	2 cut(s)	888, 1140
StyD4I	CCNGG	5 cut(s)	223, 231, 909, 936, 1004
StyI	CCWWGG	3 cut(s)	42, 456, 507
TaaI	ACNGT	4 cut(s)	289, 643, 925, 1099
TaiI	ACGT	8 cut(s)	222, 242, 300, 875, 921, 1130, 1419, 1461
TaqII	GACCGA	2 cut(s)	895, 896
TasI	AATT	6 cut(s)	115, 527, 550, 566, 719, 1625
TatI	WGTACW	2 cut(s)	345, 1515
TauI	GCSGC	6 cut(s)	254, 305, 320, 372, 716, 728
TfiI	GAWTC	3 cut(s)	204, 773, 1639
Tru1I	TTAA	1 cut(s)	1732
Tru9I	TTAA	1 cut(s)	1732
TscAI	CASTG	2 cut(s)	58, 379
TseFI	GTSAC	1 cut(s)	919
TseI	GCWGC	6 cut(s)	21, 312, 619, 806, 831, 1278
Tsp45I	GTSAC	1 cut(s)	919
TspDTI	ATGAA	3 cut(s)	124, 629, 1523
TspGWI	ACGGA	1 cut(s)	1508
TspRI	CASTG	2 cut(s)	58, 379
VpaK11BI	GGWCC	4 cut(s)	193, 466, 707, 907
XapI	RAATTY	1 cut(s)	527
XbaI	TCTAGA	1 cut(s)	769
XhoI	CTCGAG	2 cut(s)	887, 980
XmiI	GTMKAC	3 cut(s)	927, 1101, 1197
XmnI	GAANNNNTTC	2 cut(s)	1643, 1720
XspI	CTAG	2 cut(s)	770, 1707
ZraI	GACGTC	1 cut(s)	1459
ZrmI	AGTACT	1 cut(s)	347
Zsp2I	ATGCAT	1 cut(s)	1294

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.