Transcription initiation factor TFIID subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G58470 AT5G58470 |
| fragaria_vesca | FvH4_3g39510 FvH4_3g39510 FvH4_3g39510 FvH4_3g39510 |
| malus_domestica | MD03G1060300.v1.1 MD11G1063400.v1.1 |
| prunus_persica | Prupe.6G050700_v2.0.a1 Prupe.6G050700_v2.0.a1 |
| pyrus_communis | pycom03g04840 pycom11g05310 |
| rosa_chinensis | RchiOBHm_Chr5g0071281 |
| rosa_laevigata | RLG00000036198 |
| rosa_multiflora | Rmu_sc0006990.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00009860 |
| rosa_rugosa | Rorug05G0411100 Rorug05G0411100 Rorug05G0411100 Rorug05G0411100 |
| rosa_samantha | Rh5AG467300 Rh5BG485800 Rh5CG510200 Rh5DG497000 |
| rosa_wichuraiana | Rw5G043410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 477 |
| AarI | CACCTGC | 1 cut(s) | 827 |
| Acc36I | ACCTGC | 1 cut(s) | 827 |
| AccB1I | GGYRCC | 4 cut(s) | 35, 290, 920, 1294 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 371, 824 |
| AccII | CGCG | 2 cut(s) | 279, 324 |
| AclWI | GGATC | 2 cut(s) | 61, 1199 |
| AcoI | YGGCCR | 4 cut(s) | 283, 319, 880, 1133 |
| AcsI | RAATTY | 1 cut(s) | 376 |
| AcyI | GRCGYC | 1 cut(s) | 36 |
| AfaI | GTAC | 2 cut(s) | 14, 680 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 50, 365, 371, 434, 713, 824, 839, 970 |
| AgsI | TTSAA | 2 cut(s) | 382, 563 |
| AjiI | CACGTC | 1 cut(s) | 1412 |
| AjnI | CCWGG | 2 cut(s) | 364, 1314 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 409, 441 |
| AluBI | AGCT | 5 cut(s) | 722, 789, 968, 1072, 1226 |
| AluI | AGCT | 5 cut(s) | 722, 789, 968, 1072, 1226 |
| Alw21I | GWGCWC | 1 cut(s) | 1411 |
| Alw44I | GTGCAC | 1 cut(s) | 1407 |
| AlwI | GGATC | 2 cut(s) | 61, 1199 |
| AoxI | GGCC | 7 cut(s) | 205, 283, 319, 800, 880, 889, 1133 |
| ApaLI | GTGCAC | 1 cut(s) | 1407 |
| ApeKI | GCWGC | 6 cut(s) | 330, 719, 950, 1066, 1069, 1214 |
| ApoI | RAATTY | 1 cut(s) | 376 |
| AspA2I | CCTAGG | 1 cut(s) | 1298 |
| AspLEI | GCGC | 3 cut(s) | 38, 703, 1353 |
| AspS9I | GGNCC | 5 cut(s) | 800, 830, 857, 890, 1376 |
| AsuC2I | CCSGG | 1 cut(s) | 861 |
| AsuHPI | GGTGA | 6 cut(s) | 41, 356, 455, 863, 875, 985 |
| AvaII | GGWCC | 3 cut(s) | 830, 857, 1376 |
| AvrII | CCTAGG | 1 cut(s) | 1298 |
| BaeGI | GKGCMC | 1 cut(s) | 1411 |
| BalI | TGGCCA | 1 cut(s) | 1135 |
| BanI | GGYRCC | 4 cut(s) | 35, 290, 920, 1294 |
| BanII | GRGCYC | 1 cut(s) | 1306 |
| Bbv12I | GWGCWC | 1 cut(s) | 1411 |
| BbvI | GCAGC | 6 cut(s) | 342, 731, 937, 1078, 1081, 1201 |
| BceAI | ACGGC | 3 cut(s) | 192, 211, 691 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1272, 1306 |
| BciT130I | CCWGG | 2 cut(s) | 366, 1316 |
| BcnI | CCSGG | 1 cut(s) | 861 |
| BfaI | CTAG | 4 cut(s) | 57, 753, 1017, 1299 |
| BfmI | CTRYAG | 2 cut(s) | 834, 1064 |
| BfoI | RGCGCY | 1 cut(s) | 39 |
| BfuAI | ACCTGC | 1 cut(s) | 827 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 327, 888 |
| BlnI | CCTAGG | 1 cut(s) | 1298 |
| Bme1390I | CCNGG | 3 cut(s) | 366, 861, 1316 |
| Bme18I | GGWCC | 3 cut(s) | 830, 857, 1376 |
| BmgBI | CACGTC | 1 cut(s) | 1412 |
| BmgT120I | GGNCC | 5 cut(s) | 800, 830, 857, 890, 1376 |
| BmiI | GGNNCC | 6 cut(s) | 37, 292, 690, 922, 1296, 1305 |
| BmrFI | CCNGG | 3 cut(s) | 366, 861, 1316 |
| BmsI | GCATC | 3 cut(s) | 757, 856, 1174 |
| BpmI | CTGGAG | 2 cut(s) | 105, 744 |
| Bpu10I | CCTNAGC | 1 cut(s) | 969 |
| BpuMI | CCSGG | 1 cut(s) | 861 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1386 |
| BsaHI | GRCGYC | 1 cut(s) | 36 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 409, 439 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 50, 365, 371, 434, 713, 824, 839, 970 |
| Bse118I | RCCGGY | 1 cut(s) | 923 |
| Bse1I | ACTGG | 1 cut(s) | 799 |
| Bse3DI | GCAATG | 1 cut(s) | 986 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1386 |
| BseBI | CCWGG | 2 cut(s) | 366, 1316 |
| BseGI | GGATG | 2 cut(s) | 15, 818 |
| BseJI | GATNNNNATC | 1 cut(s) | 1386 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 50, 365, 371, 434, 713, 824, 839, 970 |
| BseMI | GCAATG | 1 cut(s) | 986 |
| BseNI | ACTGG | 1 cut(s) | 799 |
| BseRI | GAGGAG | 3 cut(s) | 159, 285, 768 |
| BseSI | GKGCMC | 1 cut(s) | 1411 |
| BseXI | GCAGC | 6 cut(s) | 342, 731, 937, 1078, 1081, 1201 |
| BseYI | CCCAGC | 2 cut(s) | 5, 964 |
| BsgI | GTGCAG | 2 cut(s) | 738, 1200 |
| Bsh1236I | CGCG | 2 cut(s) | 279, 324 |
| Bsh1285I | CGRYCG | 1 cut(s) | 298 |
| BshFI | GGCC | 7 cut(s) | 207, 285, 321, 802, 882, 891, 1135 |
| BshNI | GGYRCC | 4 cut(s) | 35, 290, 920, 1294 |
| BsiEI | CGRYCG | 1 cut(s) | 298 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1411 |
| BsiSI | CCGG | 2 cut(s) | 860, 924 |
| BslFI | GGGAC | 1 cut(s) | 558 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 50, 365, 371, 434, 713, 824, 839, 970 |
| BsmFI | GGGAC | 1 cut(s) | 558 |
| BsnI | GGCC | 7 cut(s) | 207, 285, 321, 802, 882, 891, 1135 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1306, 1411 |
| Bsp143I | GATC | 5 cut(s) | 53, 274, 445, 1204, 1266 |
| BspANI | GGCC | 7 cut(s) | 207, 285, 321, 802, 882, 891, 1135 |
| BspFNI | CGCG | 2 cut(s) | 279, 324 |
| BspLI | GGNNCC | 6 cut(s) | 37, 292, 690, 922, 1296, 1305 |
| BspMAI | CTGCAG | 2 cut(s) | 838, 1068 |
| BspMI | ACCTGC | 1 cut(s) | 827 |
| BspPI | GGATC | 2 cut(s) | 61, 1199 |
| BspT107I | GGYRCC | 4 cut(s) | 35, 290, 920, 1294 |
| BsrDI | GCAATG | 1 cut(s) | 986 |
| BsrFI | RCCGGY | 1 cut(s) | 923 |
| BsrI | ACTGG | 1 cut(s) | 799 |
| BssAI | RCCGGY | 1 cut(s) | 923 |
| BssMI | GATC | 5 cut(s) | 53, 274, 445, 1204, 1266 |
| BssNI | GRCGYC | 1 cut(s) | 36 |
| BssT1I | CCWWGG | 2 cut(s) | 658, 1298 |
| Bst2UI | CCWGG | 2 cut(s) | 366, 1316 |
| Bst4CI | ACNGT | 6 cut(s) | 17, 299, 515, 683, 1054, 1406 |
| Bst6I | CTCTTC | 3 cut(s) | 331, 388, 658 |
| BstACI | GRCGYC | 1 cut(s) | 36 |
| BstDEI | CTNAG | 1 cut(s) | 969 |
| BstDSI | CCRYGG | 4 cut(s) | 208, 298, 322, 514 |
| BstEII | GGTNACC | 1 cut(s) | 509 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 363 |
| BstF5I | GGATG | 2 cut(s) | 15, 818 |
| BstFNI | CGCG | 2 cut(s) | 279, 324 |
| BstH2I | RGCGCY | 1 cut(s) | 39 |
| BstHHI | GCGC | 3 cut(s) | 38, 703, 1353 |
| BstKTI | GATC | 5 cut(s) | 56, 277, 448, 1207, 1269 |
| BstMBI | GATC | 5 cut(s) | 53, 274, 445, 1204, 1266 |
| BstMCI | CGRYCG | 1 cut(s) | 298 |
| BstNI | CCWGG | 2 cut(s) | 366, 1316 |
| BstNSI | RCATGY | 2 cut(s) | 701, 1191 |
| BstPI | GGTNACC | 1 cut(s) | 509 |
| BstSCI | CCNGG | 3 cut(s) | 364, 859, 1314 |
| BstSFI | CTRYAG | 2 cut(s) | 834, 1064 |
| BstSLI | GKGCMC | 1 cut(s) | 1411 |
| BstUI | CGCG | 2 cut(s) | 279, 324 |
| BstV1I | GCAGC | 6 cut(s) | 342, 731, 937, 1078, 1081, 1201 |
| BstX2I | RGATCY | 2 cut(s) | 53, 1204 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1322 |
| BstYI | RGATCY | 2 cut(s) | 53, 1204 |
| BsuRI | GGCC | 7 cut(s) | 207, 285, 321, 802, 882, 891, 1135 |
| BtgI | CCRYGG | 4 cut(s) | 208, 298, 322, 514 |
| BtgZI | GCGATG | 3 cut(s) | 195, 1197, 1292 |
| BtrI | CACGTC | 1 cut(s) | 1412 |
| BtsCI | GGATG | 2 cut(s) | 15, 818 |
| BtsI | GCAGTG | 2 cut(s) | 70, 466 |
| BtsIMutI | CAGTG | 2 cut(s) | 70, 466 |
| BveI | ACCTGC | 1 cut(s) | 827 |
| CfoI | GCGC | 3 cut(s) | 38, 703, 1353 |
| Cfr10I | RCCGGY | 1 cut(s) | 923 |
| Cfr13I | GGNCC | 5 cut(s) | 800, 830, 857, 890, 1376 |
| Cfr42I | CCGCGG | 1 cut(s) | 325 |
| Csp6I | GTAC | 2 cut(s) | 13, 679 |
| CviAII | CATG | 3 cut(s) | 698, 1188, 1394 |
| CviQI | GTAC | 2 cut(s) | 13, 679 |
| DdeI | CTNAG | 1 cut(s) | 969 |
| DinI | GGCGCC | 1 cut(s) | 37 |
| DpnI | GATC | 5 cut(s) | 55, 276, 447, 1206, 1268 |
| DpnII | GATC | 5 cut(s) | 53, 274, 445, 1204, 1266 |
| EaeI | YGGCCR | 4 cut(s) | 283, 319, 880, 1133 |
| Eam1104I | CTCTTC | 3 cut(s) | 331, 388, 658 |
| EarI | CTCTTC | 3 cut(s) | 331, 388, 658 |
| EciI | GGCGGA | 3 cut(s) | 33, 270, 1413 |
| Eco130I | CCWWGG | 2 cut(s) | 658, 1298 |
| Eco24I | GRGCYC | 1 cut(s) | 1306 |
| Eco32I | GATATC | 1 cut(s) | 263 |
| Eco47I | GGWCC | 3 cut(s) | 830, 857, 1376 |
| Eco91I | GGTNACC | 1 cut(s) | 509 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 363 |
| EcoO65I | GGTNACC | 1 cut(s) | 509 |
| EcoRII | CCWGG | 2 cut(s) | 364, 1314 |
| EcoRV | GATATC | 1 cut(s) | 263 |
| EcoT14I | CCWWGG | 2 cut(s) | 658, 1298 |
| EcoT22I | ATGCAT | 1 cut(s) | 1189 |
| EcoT38I | GRGCYC | 1 cut(s) | 1306 |
| EgeI | GGCGCC | 1 cut(s) | 37 |
| EheI | GGCGCC | 1 cut(s) | 37 |
| ErhI | CCWWGG | 2 cut(s) | 658, 1298 |
| FaeI | CATG | 3 cut(s) | 701, 1191, 1397 |
| FaqI | GGGAC | 1 cut(s) | 558 |
| FatI | CATG | 3 cut(s) | 697, 1187, 1393 |
| FauI | CCCGC | 1 cut(s) | 424 |
| FauNDI | CATATG | 2 cut(s) | 49, 1198 |
| FokI | GGATG | 2 cut(s) | 22, 805 |
| FriOI | GRGCYC | 1 cut(s) | 1306 |
| FspBI | CTAG | 4 cut(s) | 57, 753, 1017, 1299 |
| GlaI | GCGC | 3 cut(s) | 37, 702, 1352 |
| GsaI | CCCAGC | 2 cut(s) | 9, 968 |
| GsuI | CTGGAG | 2 cut(s) | 105, 744 |
| HaeII | RGCGCY | 1 cut(s) | 39 |
| HaeIII | GGCC | 7 cut(s) | 207, 285, 321, 802, 882, 891, 1135 |
| HapII | CCGG | 2 cut(s) | 860, 924 |
| HhaI | GCGC | 3 cut(s) | 38, 703, 1353 |
| Hin1I | GRCGYC | 1 cut(s) | 36 |
| Hin1II | CATG | 3 cut(s) | 701, 1191, 1397 |
| Hin6I | GCGC | 3 cut(s) | 36, 701, 1351 |
| HinP1I | GCGC | 3 cut(s) | 36, 701, 1351 |
| HincII | GTYRAC | 1 cut(s) | 1057 |
| HindII | GTYRAC | 1 cut(s) | 1057 |
| HinfI | GANTC | 3 cut(s) | 1020, 1101, 1163 |
| HpaII | CCGG | 2 cut(s) | 860, 924 |
| HphI | GGTGA | 6 cut(s) | 41, 356, 455, 863, 875, 985 |
| Hpy166II | GTNNAC | 4 cut(s) | 215, 1057, 1376, 1409 |
| Hpy188III | TCNNGA | 3 cut(s) | 20, 84, 1167 |
| Hpy8I | GTNNAC | 4 cut(s) | 215, 1057, 1376, 1409 |
| HpyAV | CCTTC | 1 cut(s) | 557 |
| HpyCH4III | ACNGT | 6 cut(s) | 17, 299, 515, 683, 1054, 1406 |
| HpyCH4IV | ACGT | 2 cut(s) | 1114, 1411 |
| HpyCH4V | TGCA | 9 cut(s) | 389, 719, 770, 836, 869, 1066, 1187, 1217, 1409 |
| HpyF3I | CTNAG | 1 cut(s) | 969 |
| HpySE526I | ACGT | 2 cut(s) | 1114, 1411 |
| Hsp92I | GRCGYC | 1 cut(s) | 36 |
| Hsp92II | CATG | 3 cut(s) | 701, 1191, 1397 |
| HspAI | GCGC | 3 cut(s) | 36, 701, 1351 |
| KasI | GGCGCC | 1 cut(s) | 35 |
| KspI | CCGCGG | 1 cut(s) | 325 |
| Kzo9I | GATC | 5 cut(s) | 53, 274, 445, 1204, 1266 |
| LmnI | GCTCC | 1 cut(s) | 1309 |
| Lsp1109I | GCAGC | 6 cut(s) | 342, 731, 937, 1078, 1081, 1201 |
| LweI | GCATC | 3 cut(s) | 757, 856, 1174 |
| MaeI | CTAG | 4 cut(s) | 57, 753, 1017, 1299 |
| MaeII | ACGT | 2 cut(s) | 1114, 1411 |
| MaeIII | GTNAC | 7 cut(s) | 191, 404, 509, 554, 653, 1007, 1048 |
| MalI | GATC | 5 cut(s) | 55, 276, 447, 1206, 1268 |
| MboI | GATC | 5 cut(s) | 53, 274, 445, 1204, 1266 |
| MboII | GAAGA | 5 cut(s) | 348, 405, 675, 1110, 1214 |
| MflI | RGATCY | 2 cut(s) | 53, 1204 |
| MhlI | GDGCHC | 2 cut(s) | 1306, 1411 |
| MlsI | TGGCCA | 1 cut(s) | 1135 |
| MluCI | AATT | 6 cut(s) | 376, 532, 604, 730, 991, 1360 |
| MluNI | TGGCCA | 1 cut(s) | 1135 |
| Mly113I | GGCGCC | 1 cut(s) | 36 |
| Mox20I | TGGCCA | 1 cut(s) | 1135 |
| Mph1103I | ATGCAT | 1 cut(s) | 1189 |
| MscI | TGGCCA | 1 cut(s) | 1135 |
| MseI | TTAA | 1 cut(s) | 1253 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1392 |
| Msp20I | TGGCCA | 1 cut(s) | 1135 |
| MspA1I | CMGCKG | 4 cut(s) | 324, 333, 722, 1226 |
| MspI | CCGG | 2 cut(s) | 860, 924 |
| MspR9I | CCNGG | 3 cut(s) | 366, 861, 1316 |
| MvaI | CCWGG | 2 cut(s) | 366, 1316 |
| MvnI | CGCG | 2 cut(s) | 279, 324 |
| NarI | GGCGCC | 1 cut(s) | 36 |
| NciI | CCSGG | 1 cut(s) | 861 |
| NdeI | CATATG | 2 cut(s) | 49, 1198 |
| NdeII | GATC | 5 cut(s) | 53, 274, 445, 1204, 1266 |
| NlaIII | CATG | 3 cut(s) | 701, 1191, 1397 |
| NlaIV | GGNNCC | 6 cut(s) | 37, 292, 690, 922, 1296, 1305 |
| NmeAIII | GCCGAG | 2 cut(s) | 311, 908 |
| NmuCI | GTSAC | 1 cut(s) | 1007 |
| NsiI | ATGCAT | 1 cut(s) | 1189 |
| NspI | RCATGY | 2 cut(s) | 701, 1191 |
| PaqCI | CACCTGC | 1 cut(s) | 827 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 283 |
| PfeI | GAWTC | 3 cut(s) | 1020, 1101, 1163 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 371, 824 |
| PluTI | GGCGCC | 1 cut(s) | 39 |
| PsiI | TTATAA | 1 cut(s) | 477 |
| Psp6I | CCWGG | 2 cut(s) | 364, 1314 |
| PspEI | GGTNACC | 1 cut(s) | 509 |
| PspFI | CCCAGC | 2 cut(s) | 5, 964 |
| PspGI | CCWGG | 2 cut(s) | 364, 1314 |
| PspN4I | GGNNCC | 6 cut(s) | 37, 292, 690, 922, 1296, 1305 |
| PspPI | GGNCC | 5 cut(s) | 800, 830, 857, 890, 1376 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 625, 657 |
| PstI | CTGCAG | 2 cut(s) | 838, 1068 |
| PsuI | RGATCY | 2 cut(s) | 53, 1204 |
| PvuII | CAGCTG | 2 cut(s) | 722, 1226 |
| RsaI | GTAC | 2 cut(s) | 14, 680 |
| RsaNI | GTAC | 2 cut(s) | 13, 679 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1392 |
| SacII | CCGCGG | 1 cut(s) | 325 |
| SaqAI | TTAA | 1 cut(s) | 1253 |
| Sau3AI | GATC | 5 cut(s) | 53, 274, 445, 1204, 1266 |
| Sau96I | GGNCC | 5 cut(s) | 800, 830, 857, 890, 1376 |
| SbfI | CCTGCAGG | 1 cut(s) | 838 |
| ScrFI | CCNGG | 3 cut(s) | 366, 861, 1316 |
| SdaI | CCTGCAGG | 1 cut(s) | 838 |
| SduI | GDGCHC | 2 cut(s) | 1306, 1411 |
| SfaNI | GCATC | 3 cut(s) | 757, 856, 1174 |
| SfcI | CTRYAG | 2 cut(s) | 834, 1064 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 888 |
| SfoI | GGCGCC | 1 cut(s) | 37 |
| Sfr303I | CCGCGG | 1 cut(s) | 325 |
| SgrBI | CCGCGG | 1 cut(s) | 325 |
| SinI | GGWCC | 3 cut(s) | 830, 857, 1376 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1392 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 838 |
| Sse9I | AATT | 6 cut(s) | 376, 532, 604, 730, 991, 1360 |
| SspDI | GGCGCC | 1 cut(s) | 35 |
| SspMI | CTAG | 4 cut(s) | 57, 753, 1017, 1299 |
| StyD4I | CCNGG | 3 cut(s) | 364, 859, 1314 |
| StyI | CCWWGG | 2 cut(s) | 658, 1298 |
| TaaI | ACNGT | 6 cut(s) | 17, 299, 515, 683, 1054, 1406 |
| TaiI | ACGT | 2 cut(s) | 1117, 1414 |
| TaqI | TCGA | 2 cut(s) | 250, 931 |
| TasI | AATT | 6 cut(s) | 376, 532, 604, 730, 991, 1360 |
| TauI | GCSGC | 8 cut(s) | 63, 180, 240, 324, 456, 459, 471, 706 |
| TfiI | GAWTC | 3 cut(s) | 1020, 1101, 1163 |
| Tru1I | TTAA | 1 cut(s) | 1253 |
| Tru9I | TTAA | 1 cut(s) | 1253 |
| TscAI | CASTG | 2 cut(s) | 70, 466 |
| TseFI | GTSAC | 1 cut(s) | 1007 |
| TseI | GCWGC | 6 cut(s) | 330, 719, 950, 1066, 1069, 1214 |
| Tsp45I | GTSAC | 1 cut(s) | 1007 |
| TspDTI | ATGAA | 3 cut(s) | 1014, 1176, 1215 |
| TspGWI | ACGGA | 3 cut(s) | 108, 971, 1197 |
| TspRI | CASTG | 2 cut(s) | 70, 466 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 371, 824 |
| VneI | GTGCAC | 1 cut(s) | 1407 |
| VpaK11BI | GGWCC | 3 cut(s) | 830, 857, 1376 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 363 |
| XapI | RAATTY | 1 cut(s) | 376 |
| XceI | RCATGY | 2 cut(s) | 701, 1191 |
| XmaJI | CCTAGG | 1 cut(s) | 1298 |
| XspI | CTAG | 4 cut(s) | 57, 753, 1017, 1299 |
| Zsp2I | ATGCAT | 1 cut(s) | 1189 |