Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002217

Physical Location & Seq

Genomic Coordinates Forward (+)

3643354 .. 3649148

Gene Structure 5795 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G051900.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3459 bp

ATGCTGAAGTTAGGGTTCAAGTTTGGATTTTTCATGGTAGCTTCGGCGCCGATCCTTCTCGGATTGGCGTTTCGAACCTACTTCGGCGGCGGTGACGCCAATTCGCGTTTCTCGATTATTTTTGTGGTTTTGAGTTTGGTCGTTTCGGTGATCATGGCGTTTTCTGGCGTTTTCCGCAGCTTACTGCACTATATGCTTCCAAGAAAGAGACCTAGCGAAGGAGTGGTTGTAGAAGAAGAAGAAGACGCCATTGTGAGCAAGAACAACAGCACCAGCTCCAGCTCAGCCGCAGCATCGTCTGTTAAGAAGCATCGGATCGGCCACTTCGTCGCCGAATCGACTGTCAACAGCAACAGCCTCATCAGCAACAACCACGGCATAGTTGAAAGGGACGTGCCAATCATGGCTTTGGGCCATTCCAACCCCTCCGATATCGACGAGGATCTGCACAGCCGGCAGCTCGCGGTCTATGGCCGCGAGACTATGCGGAGGCTCTTTGCGTCGAATGTCCTCATCTCGGGGATTCAAGGCCTCGGCGCTGAGATTGCAAAGAACCTCATTCTTGCTGGTGTCAAGTCTGTGATGTTGCATGATGAAGGGAAAGTGGAGCTATGGGATTTATCCAGTAATTTTGTATTTTCTGAGGATGATGTTGGCAAGAACAGAGCACTTGTTGCTGTTCAAAACTTGCAGGAACTCAACAATGCTGTGGTTGTTCATACCTTGACAACCAAATTGGCCAAAGAACAGCTTGCTGATTTCCAGGCTGTTGTATTCACTGACATCAGTCTTGAGAAAGCCATTGAATTCAATGATTATTGTCATAATCATCAACCTCCAATTGCCTTTATTAAAACCGAAGCTAGAGGCCTCTTTGGTTCTGTGTTCTGTGACTTCGGACCTGAGTTCACTGTTTTTGATGTTGATGGGGAGGATCCACACACTGGTATTATTGCATCCATAAGCAATGACAACCCTGCTCTAGTGTCATGTGTTGACGATGAAAGACTTGAGTTTCAGGATGGGGATCTTGTTGTGTTCTCAGAAGTTCATGGAATGAAAGAACTAAATGATGGAAAGCCAAGGAAGATAAAGAATGCTAGGGCTTATTCATTTACTCTCGAGGAGGATACCACGGGTTTTGGTACCTATGAGAAGGGGGGTATTGTCACACAGGTGAAGCAGCCCAAAGTCTTGAACTTTAAGCCGTTGAGAGAAGCACTCAATGATCCTGGCGATATTCTTTTCAGTGATTTCTCCAAGTTTGATCGCCCACCTCTCCTACACTTGGCATTTCAAGCGCTGGACAAATTCGTGTCAGAGTCGGGGTGCTTCCCTATTCCTGGTTCAGAAGAGGATGCTCAGAAGCTTATATCTATTGCTAGTAACATTAATGAGAAACTGGGAGATGGGAGACTGGAAGATATTAATCCAAAACTTTTGCGGCACTTTGCTTTCGGTGCAAAGGCGGTACTAAACCCCATGGCTGCCATGTTTGGTGGTATTGTGGGTCAAGAGGTTGTAAAAGCTTGCTCTGGGAAGTTTCATCCACTCTTCCAGTTCTTCTACTTTGACTCAGTAGAATCACTTCCTACAGAGCCACTGCAGCCCAGTGATTTGAAACCATTAAATAGCCGTTATGATGCACAGATTTCAGTTTTTGGGTCTAAGCTACAGAAGAAACTGGAAGATTCCAAAGTATTTCTTGTTGGATCAGGGGCACTAGGATGTGAGTTATTAAAAAATTTGGCCCTGATGGGAGTTTCATGTAGCAACCATGGGAAGCTAACAGTCACTGATGATGATGTAATTGAGAAGAGTAACCTCAGTAGGCAGTTCCTCTTCCGTGATTGGAACATTGGGCAGGCCAAATCAACAGTTGCTGCTTCTGCGGCTGCATCAATAAATCCGCGTCTTAATGTTGAAGCCTTGCAGAATAGAGTTGGCCCTGAAACTGAGAATGTGTTTGATGATACCTTCTGGGAGAATTTAAGTGTTGTTATTAATGCGCTAGACAATGTCAATGCGAGGCTGTATGTTGATCAGAGGTGCTTATATTTTCAGAAAGCACTTCTTGAGTCGGGTACTCTTGGCGCAAAATGCAACACTCAGATGGTTATTCCTCACCTAACAGAAAACTATGGTGCATCAAGGGACCCGCCGGAGAAACAAGCACCCATGTGCACTGTGCACTCATTTCCCCACAACATTGACCACTGCTTGACATGGGCTCGATCTGAGTTTGAGGGTTTGCTTGAGAAAACTCCAGCTGAAGTGAATGCATATTTATCCAAGCCAAGTGAATATGTCACTACCATGAGGAATGCTGGCGACGCACAGGCCAGGGATACCTTGGAGCGTGTTCTTGAGTGCCTTGATAGAGAAAGATGTGAGACATTCCAAGATTGCATTGGCTGGGCACGCCTGAAGTTTGAAGATTATTTTTCCAACCGCGTGAAACAACTTATTTATACTTTTCCTGAAGATGCAACAACTAGTACTGGGGCTCCATTCTGGTCCGCCCCTAAGCGATTCCCCCATCCACTGCAGTTCTCAGCTGCTGATCCTGGTCACCTTCATTTTGTTATAGCAGCTGCCATACTAAGGGCAGAGACATTTGGGATTCCAATCCCTGATTGGGTTAGAAACACTAAGAAGGTGGCTGAAGCTGTTGAGAAAGTGGAAGTCTCAGAATTTCAGCCTAAGAAAGATGCGAAAATAGTTACTGATGATGAGGCTACCAATTTAACTCCTCAATCATTAGATGATGCACAGGTCATTAATGAATTGATTATCAAGTTAGAGCATTGTCGAGAGAAACTCCCACCAGGGTTCAGAATGAAACCAATTCAATTTGAGAAGGATGATGATACAAATTACCATATGGATCTGATAGCCGGGCTTGCCAATATGCGGGCTAGGAATTACAGCATTCCTGAGGTTGACAAGCTGAAAGCCAAGTTTATTGCCGGTAGGATTATCCCTGCAATTGCAACGACCACGGCAATGGCCACAGGACTTGTGTGCTTGGAGCTTTACAAGGTTTTGGATGGAGGCCACAAGCTAGAAGACTATAGAAACACATTTGCAAATCTAGCTCTACCTTTGTTCTCCATGGCCGAGCCAGTTCCACCCAAGGTCATCAAGCACCGTGACATGAGCTGGACCATCTGGGATAGGTGGATCCTGAGAGGCAATCCAACTCTGAGGGAACTTATTCAGTGGCTAAAGGACAAAGGACTGAAGGCTTATAGCATCTCATTTGAAAGTTGCCTGCTTTATAATACCATGTTTTCTCGACACCAAGACCGAATGGACAGGAAGATGGTTGATCTGGTTAGGGAAGTGGCAGGGGCGGAACTGCCTCCTTATCGTCGCCACTTTGATGTTGTTGTGGCTTGTGAGGATGAAGAGGATAACGATATTGACATCCCTCTGGTATCCATTTACTTCCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006464 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009987 GO:0010035 GO:0010038 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030054 GO:0032446 GO:0033554 GO:0036211 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0070647 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 ko05012 map04120 map05012

Pfam Domains

Protein Families

E1_4HB E1_FCCH E1_UFD ThiF UBA_e1_thiolCys

Protein Analysis

1153

Amino Acids

128.59

Weight (kDa)

5.49

Isoelectric Point (pI)

33.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002217)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30110 AT5G06460
fragaria_vesca	FvH4_3g39370 FvH4_3g39370 FvH4_3g39370 FvH4_3g39370 FvH4_3g39370 FvH4_3g39370 FvH4_3g39370 FvH4_3g39370 FvH4_3g39370 FvH4_6g10930 FvH4_6g10930 FvH4_6g10930
malus_domestica	MD04G1163500.v1.1 MD11G1065700.v1.1 MD12G1177300.v1.1
prunus_persica	Prupe.6G051900_v2.0.a1 Prupe.6G051900_v2.0.a1 Prupe.6G051900_v2.0.a1 Prupe.6G051900_v2.0.a1 Prupe.6G282900_v2.0.a1
pyrus_communis	pycom04g14620 pycom11g05570 pycom12g16790
rosa_chinensis	RchiOBHm_Chr3g0462201 RchiOBHm_Chr5g0070911
rosa_laevigata	RLG00000024878 RLG00000036170
rosa_multiflora	Rmu_sc0002944.1_g000004 Rmu_sc0005970.1_g000009 Rmu_sc0006715.1_g000003
rosa_roxburghii	Rroxscaffold_1G00010290 Rroxscaffold_6G00417690
rosa_rugosa	Rorug03G0054900 Rorug05G0408500 Rorug05G0408500 Rorug05G0408500
rosa_samantha	Rh3CG119500 Rh5AG464600 Rh5DG494900
rosa_wichuraiana	Rw3G009590 Rw5G043220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3282
Acc65I	GGTACC	1 cut(s)	1145
AccB1I	GGYRCC	2 cut(s)	46, 1145
AccB7I	CCANNNNNTGG	1 cut(s)	944
AccII	CGCG	5 cut(s)	106, 464, 477, 1912, 2454
AcoI	YGGCCR	5 cut(s)	319, 472, 738, 3009, 3117
AcsI	RAATTY	5 cut(s)	806, 1310, 1744, 1987, 2693
AcuI	CTGAAG	6 cut(s)	26, 2292, 2447, 2502, 2685, 3263
AcyI	GRCGYC	3 cut(s)	47, 96, 246
AfaI	GTAC	4 cut(s)	1147, 1473, 2086, 2500
AfeI	AGCGCT	1 cut(s)	1302
AfiI	CCNNNNNNNGG	8 cut(s)	218, 517, 944, 1288, 1343, 2604, 2638, 2913
AhlI	ACTAGT	1 cut(s)	2495
AjiI	CACGTC	1 cut(s)	394
AjnI	CCWGG	6 cut(s)	762, 1231, 1342, 2342, 2566, 2827
AjuI	GAANNNNNNNTTGG	2 cut(s)	92, 124
AleI	CACNNNNGTG	2 cut(s)	1175, 2179
Alw21I	GWGCWC	3 cut(s)	670, 2186, 2193
Alw26I	GTCTC	6 cut(s)	202, 473, 1408, 2387, 2606, 2692
Alw44I	GTGCAC	2 cut(s)	2182, 2189
AlwNI	CAGNNNCTG	3 cut(s)	1796, 1883, 2561
Ama87I	CYCGRG	2 cut(s)	517, 1121
Aor51HI	AGCGCT	1 cut(s)	1302
ApaLI	GTGCAC	2 cut(s)	2182, 2189
ApoI	RAATTY	5 cut(s)	806, 1310, 1744, 1987, 2693
ArsI	GACNNNNNNTTYG	2 cut(s)	327, 359
AseI	ATTAAT	4 cut(s)	1392, 1428, 2004, 2781
Asp700I	GAANNNNTTC	2 cut(s)	1587, 3216
Asp718I	GGTACC	1 cut(s)	1145
AspLEI	GCGC	5 cut(s)	49, 539, 1303, 2011, 2096
AspS9I	GGNCC	7 cut(s)	412, 899, 1750, 1946, 2155, 2517, 3165
AsuC2I	CCSGG	1 cut(s)	2899
AsuHPI	GGTGA	5 cut(s)	104, 160, 1189, 2117, 2564
AsuII	TTCGAA	1 cut(s)	73
AvaI	CYCGRG	2 cut(s)	517, 1121
AvaII	GGWCC	4 cut(s)	899, 2155, 2517, 3165
AxyI	CCTNAGG	1 cut(s)	2937
BaeGI	GKGCMC	4 cut(s)	1723, 2186, 2193, 2422
BalI	TGGCCA	2 cut(s)	740, 3011
BamHI	GGATCC	2 cut(s)	934, 3183
BanI	GGYRCC	2 cut(s)	46, 1145
BanII	GRGCYC	2 cut(s)	2233, 2509
BarI	GAAGNNNNNNTAC	2 cut(s)	1572, 1604
BbsI	GAAGAC	2 cut(s)	249, 3075
Bbv12I	GWGCWC	3 cut(s)	670, 2186, 2193
BceAI	ACGGC	4 cut(s)	391, 1192, 1620, 3018
BciT130I	CCWGG	6 cut(s)	764, 1233, 1344, 2344, 2568, 2829
BciVI	GTATCC	3 cut(s)	1123, 2341, 3451
BclI	TGATCA	2 cut(s)	150, 2041
BcnI	CCSGG	1 cut(s)	2899
BcoDI	GTCTC	6 cut(s)	202, 473, 1408, 2387, 2606, 2692
BcuI	ACTAGT	1 cut(s)	2495
BfmI	CTRYAG	5 cut(s)	1593, 1604, 1673, 2546, 3073
BfoI	RGCGCY	3 cut(s)	50, 540, 1304
BfuI	GTATCC	3 cut(s)	1123, 2341, 3451
BlpI	GCTNAGC	1 cut(s)	283
BmcAI	AGTACT	1 cut(s)	2500
Bme1390I	CCNGG	7 cut(s)	764, 1233, 1344, 2344, 2568, 2829, 2899
Bme18I	GGWCC	4 cut(s)	899, 2155, 2517, 3165
BmeT110I	CYCGRG	2 cut(s)	517, 1121
BmgBI	CACGTC	1 cut(s)	394
BmgT120I	GGNCC	7 cut(s)	412, 899, 1750, 1946, 2155, 2517, 3165
BmiI	GGNNCC	7 cut(s)	48, 936, 1147, 2156, 2157, 2508, 3185
BmrFI	CCNGG	7 cut(s)	764, 1233, 1344, 2344, 2568, 2829, 2899
BmrI	ACTGGG	3 cut(s)	1412, 1605, 2511
BmuI	ACTGGG	3 cut(s)	1412, 1605, 2511
BoxI	GACNNNNGTC	1 cut(s)	786
BpiI	GAAGAC	2 cut(s)	249, 3075
BplI	GAGNNNNNCTC	4 cut(s)	1206, 1238, 2805, 2837
BpmI	CTGGAG	2 cut(s)	262, 2250
Bpu10I	CCTNAGC	1 cut(s)	2526
Bpu1102I	GCTNAGC	1 cut(s)	283
Bpu14I	TTCGAA	1 cut(s)	73
BpuEI	CTTGAG	5 cut(s)	812, 1031, 2096, 2276, 2387
BpuMI	CCSGG	1 cut(s)	2899
BsaBI	GATNNNNATC	3 cut(s)	1026, 1428, 2627
BsaHI	GRCGYC	3 cut(s)	47, 96, 246
BsaI	GGTCTC	1 cut(s)	202
BsaXI	ACNNNNNCTCC	4 cut(s)	213, 243, 2491, 2521
Bsc4I	CCNNNNNNNGG	8 cut(s)	218, 517, 944, 1288, 1343, 2604, 2638, 2913
Bse118I	RCCGGY	2 cut(s)	453, 2969
Bse1I	ACTGG	9 cut(s)	624, 949, 1407, 1422, 1558, 1611, 1689, 2506, 3125
Bse21I	CCTNAGG	1 cut(s)	2937
Bse3DI	GCAATG	2 cut(s)	973, 3012
Bse8I	GATNNNNATC	3 cut(s)	1026, 1428, 2627
BseBI	CCWGG	6 cut(s)	764, 1233, 1344, 2344, 2568, 2829
BseJI	GATNNNNATC	3 cut(s)	1026, 1428, 2627
BseLI	CCNNNNNNNGG	8 cut(s)	218, 517, 944, 1288, 1343, 2604, 2638, 2913
BseMI	GCAATG	2 cut(s)	973, 3012
BseNI	ACTGG	9 cut(s)	624, 949, 1407, 1422, 1558, 1611, 1689, 2506, 3125
BseRI	GAGGAG	2 cut(s)	1139, 2742
BseSI	GKGCMC	4 cut(s)	1723, 2186, 2193, 2422
BseYI	CCCAGC	1 cut(s)	2415
BsgI	GTGCAG	2 cut(s)	170, 431
Bsh1236I	CGCG	5 cut(s)	106, 464, 477, 1912, 2454
BshNI	GGYRCC	2 cut(s)	46, 1145
BsiHKAI	GWGCWC	3 cut(s)	670, 2186, 2193
BsiHKCI	CYCGRG	2 cut(s)	517, 1121
BsiSI	CCGG	4 cut(s)	454, 2162, 2898, 2970
BslFI	GGGAC	2 cut(s)	404, 2168
BslI	CCNNNNNNNGG	8 cut(s)	218, 517, 944, 1288, 1343, 2604, 2638, 2913
BsmAI	GTCTC	6 cut(s)	202, 473, 1408, 2387, 2606, 2692
BsmFI	GGGAC	2 cut(s)	404, 2168
BsmI	GAATGC	4 cut(s)	1102, 2284, 2329, 2931
Bso31I	GGTCTC	1 cut(s)	202
BsoBI	CYCGRG	2 cut(s)	517, 1121
Bsp119I	TTCGAA	1 cut(s)	73
Bsp1286I	GDGCHC	7 cut(s)	670, 1723, 2186, 2193, 2233, 2422, 2509
Bsp1720I	GCTNAGC	1 cut(s)	283
Bsp19I	CCATGG	3 cut(s)	1482, 1777, 3114
BspFNI	CGCG	5 cut(s)	106, 464, 477, 1912, 2454
BspLI	GGNNCC	7 cut(s)	48, 936, 1147, 2156, 2157, 2508, 3185
BspMAI	CTGCAG	2 cut(s)	1608, 2550
BspT104I	TTCGAA	1 cut(s)	73
BspT107I	GGYRCC	2 cut(s)	46, 1145
BspTNI	GGTCTC	1 cut(s)	202
BsrDI	GCAATG	2 cut(s)	973, 3012
BsrFI	RCCGGY	2 cut(s)	453, 2969
BsrI	ACTGG	9 cut(s)	624, 949, 1407, 1422, 1558, 1611, 1689, 2506, 3125
BssAI	RCCGGY	2 cut(s)	453, 2969
BssNI	GRCGYC	3 cut(s)	47, 96, 246
BssT1I	CCWWGG	6 cut(s)	1082, 1482, 1777, 2352, 3114, 3135
Bst2UI	CCWGG	6 cut(s)	764, 1233, 1344, 2344, 2568, 2829
Bst4CI	ACNGT	6 cut(s)	343, 913, 1792, 1879, 2188, 3152
Bst6I	CTCTTC	5 cut(s)	1347, 1559, 1811, 1847, 3405
BstACI	GRCGYC	3 cut(s)	47, 96, 246
BstAPI	GCANNNNNTGC	2 cut(s)	193, 674
BstBI	TTCGAA	1 cut(s)	73
BstDSI	CCRYGG	6 cut(s)	373, 1134, 1482, 1777, 3000, 3114
BstEII	GGTNACC	1 cut(s)	2570
BstENI	CCTNNNNNAGG	1 cut(s)	216
BstFNI	CGCG	5 cut(s)	106, 464, 477, 1912, 2454
BstH2I	RGCGCY	3 cut(s)	50, 540, 1304
BstHHI	GCGC	5 cut(s)	49, 539, 1303, 2011, 2096
BstMAI	GTCTC	6 cut(s)	202, 473, 1408, 2387, 2606, 2692
BstNI	CCWGG	6 cut(s)	764, 1233, 1344, 2344, 2568, 2829
BstPAI	GACNNNNGTC	1 cut(s)	786
BstPI	GGTNACC	1 cut(s)	2570
BstSCI	CCNGG	7 cut(s)	762, 1231, 1342, 2342, 2566, 2827, 2897
BstSFI	CTRYAG	5 cut(s)	1593, 1604, 1673, 2546, 3073
BstSLI	GKGCMC	4 cut(s)	1723, 2186, 2193, 2422
BstUI	CGCG	5 cut(s)	106, 464, 477, 1912, 2454
BstV2I	GAAGAC	2 cut(s)	249, 3075
BstX2I	RGATCY	5 cut(s)	442, 934, 1027, 2887, 3183
BstXI	CCANNNNNNTGG	1 cut(s)	3007
BstYI	RGATCY	5 cut(s)	442, 934, 1027, 2887, 3183
Bsu36I	CCTNAGG	1 cut(s)	2937
BsuI	GTATCC	3 cut(s)	1123, 2341, 3451
BtgI	CCRYGG	6 cut(s)	373, 1134, 1482, 1777, 3000, 3114
BtrI	CACGTC	1 cut(s)	394
BtsI	GCAGTG	3 cut(s)	1601, 2215, 2543
CaiI	CAGNNNCTG	3 cut(s)	1796, 1883, 2561
CfoI	GCGC	5 cut(s)	49, 539, 1303, 2011, 2096
Cfr10I	RCCGGY	2 cut(s)	453, 2969
Cfr13I	GGNCC	7 cut(s)	412, 899, 1750, 1946, 2155, 2517, 3165
CseI	GACGC	5 cut(s)	104, 254, 489, 1901, 2342
Csp6I	GTAC	4 cut(s)	1146, 1472, 2085, 2499
CspCI	CAANNNNNGTGG	4 cut(s)	1123, 1158, 3001, 3036
CviQI	GTAC	4 cut(s)	1146, 1472, 2085, 2499
DinI	GGCGCC	1 cut(s)	48
EaeI	YGGCCR	5 cut(s)	319, 472, 738, 3009, 3117
Eam1104I	CTCTTC	5 cut(s)	1347, 1559, 1811, 1847, 3405
EarI	CTCTTC	5 cut(s)	1347, 1559, 1811, 1847, 3405
EciI	GGCGGA	2 cut(s)	2509, 3371
Eco130I	CCWWGG	6 cut(s)	1082, 1482, 1777, 2352, 3114, 3135
Eco147I	AGGCCT	2 cut(s)	531, 870
Eco24I	GRGCYC	2 cut(s)	2233, 2509
Eco31I	GGTCTC	1 cut(s)	202
Eco32I	GATATC	1 cut(s)	433
Eco47I	GGWCC	4 cut(s)	899, 2155, 2517, 3165
Eco47III	AGCGCT	1 cut(s)	1302
Eco57I	CTGAAG	6 cut(s)	26, 2292, 2447, 2502, 2685, 3263
Eco81I	CCTNAGG	1 cut(s)	2937
Eco88I	CYCGRG	2 cut(s)	517, 1121
Eco91I	GGTNACC	1 cut(s)	2570
EcoNI	CCTNNNNNAGG	1 cut(s)	216
EcoO109I	RGGNCCY	1 cut(s)	2155
EcoO65I	GGTNACC	1 cut(s)	2570
EcoRI	GAATTC	1 cut(s)	806
EcoRII	CCWGG	6 cut(s)	762, 1231, 1342, 2342, 2566, 2827
EcoRV	GATATC	1 cut(s)	433
EcoT14I	CCWWGG	6 cut(s)	1082, 1482, 1777, 2352, 3114, 3135
EcoT22I	ATGCAT	1 cut(s)	2284
EcoT38I	GRGCYC	2 cut(s)	2233, 2509
EgeI	GGCGCC	1 cut(s)	48
EheI	GGCGCC	1 cut(s)	48
ErhI	CCWWGG	6 cut(s)	1082, 1482, 1777, 2352, 3114, 3135
FalI	AAGNNNNNCTT	6 cut(s)	735, 767, 1689, 1721, 2058, 2090
FaqI	GGGAC	2 cut(s)	404, 2168
FauI	CCCGC	2 cut(s)	2166, 2907
FauNDI	CATATG	1 cut(s)	2883
FbaI	TGATCA	2 cut(s)	150, 2041
FriOI	GRGCYC	2 cut(s)	2233, 2509
GlaI	GCGC	5 cut(s)	48, 538, 1302, 2010, 2095
GsaI	CCCAGC	1 cut(s)	2419
GsuI	CTGGAG	2 cut(s)	262, 2250
HaeII	RGCGCY	3 cut(s)	50, 540, 1304
HapII	CCGG	4 cut(s)	454, 2162, 2898, 2970
HgaI	GACGC	5 cut(s)	104, 254, 489, 1901, 2342
HhaI	GCGC	5 cut(s)	49, 539, 1303, 2011, 2096
Hin1I	GRCGYC	3 cut(s)	47, 96, 246
Hin6I	GCGC	5 cut(s)	47, 537, 1301, 2009, 2094
HinP1I	GCGC	5 cut(s)	47, 537, 1301, 2009, 2094
HincII	GTYRAC	3 cut(s)	346, 997, 2944
HindII	GTYRAC	3 cut(s)	346, 997, 2944
HindIII	AAGCTT	2 cut(s)	1367, 1527
HinfI	GANTC	9 cut(s)	335, 523, 1322, 1574, 1583, 1691, 2078, 2532, 2623
HpaII	CCGG	4 cut(s)	454, 2162, 2898, 2970
HphI	GGTGA	5 cut(s)	104, 160, 1189, 2117, 2564
Hpy166II	GTNNAC	6 cut(s)	346, 909, 997, 2184, 2191, 2944
Hpy8I	GTNNAC	6 cut(s)	346, 909, 997, 2184, 2191, 2944
Hpy99I	CGWCG	5 cut(s)	332, 440, 505, 2336, 3378
HpyAV	CCTTC	9 cut(s)	65, 212, 590, 1150, 1987, 2585, 2650, 2854, 3238
HpyCH4III	ACNGT	6 cut(s)	343, 913, 1792, 1879, 2188, 3152
HpyCH4IV	ACGT	1 cut(s)	393
HpySE526I	ACGT	1 cut(s)	393
Hsp92I	GRCGYC	3 cut(s)	47, 96, 246
HspAI	GCGC	5 cut(s)	47, 537, 1301, 2009, 2094
KasI	GGCGCC	1 cut(s)	46
KflI	GGGWCCC	1 cut(s)	2155
KpnI	GGTACC	1 cut(s)	1149
KroI	GCCGGC	1 cut(s)	453
KroNI	GCCGGC	1 cut(s)	455
Ksp22I	TGATCA	2 cut(s)	150, 2041
LmnI	GCTCC	5 cut(s)	281, 607, 2356, 2512, 3031
MaeII	ACGT	1 cut(s)	393
MfeI	CAATTG	2 cut(s)	840, 2988
MflI	RGATCY	5 cut(s)	442, 934, 1027, 2887, 3183
MhlI	GDGCHC	7 cut(s)	670, 1723, 2186, 2193, 2233, 2422, 2509
MlsI	TGGCCA	2 cut(s)	740, 3011
MluNI	TGGCCA	2 cut(s)	740, 3011
Mly113I	GGCGCC	1 cut(s)	47
MlyI	GAGTC	3 cut(s)	1331, 1568, 2087
MmeI	TCCRAC	4 cut(s)	444, 1690, 2472, 3224
Mox20I	TGGCCA	2 cut(s)	740, 3011
Mph1103I	ATGCAT	1 cut(s)	2284
MroNI	GCCGGC	1 cut(s)	453
MroXI	GAANNNNTTC	2 cut(s)	1587, 3216
MscI	TGGCCA	2 cut(s)	740, 3011
MslI	CAYNNNNRTG	7 cut(s)	1175, 1726, 2111, 2179, 2315, 3005, 3384
Msp20I	TGGCCA	2 cut(s)	740, 3011
MspA1I	CMGCKG	3 cut(s)	2270, 2558, 2594
MspI	CCGG	4 cut(s)	454, 2162, 2898, 2970
MspR9I	CCNGG	7 cut(s)	764, 1233, 1344, 2344, 2568, 2829, 2899
MunI	CAATTG	2 cut(s)	840, 2988
Mva1269I	GAATGC	4 cut(s)	1102, 2284, 2329, 2931
MvaI	CCWGG	6 cut(s)	764, 1233, 1344, 2344, 2568, 2829
MvnI	CGCG	5 cut(s)	106, 464, 477, 1912, 2454
NaeI	GCCGGC	1 cut(s)	455
NarI	GGCGCC	1 cut(s)	47
NciI	CCSGG	1 cut(s)	2899
NcoI	CCATGG	3 cut(s)	1482, 1777, 3114
NdeI	CATATG	1 cut(s)	2883
NgoMIV	GCCGGC	1 cut(s)	453
NlaIV	GGNNCC	7 cut(s)	48, 936, 1147, 2156, 2157, 2508, 3185
NmeAIII	GCCGAG	2 cut(s)	513, 3145
NmuCI	GTSAC	7 cut(s)	92, 890, 1168, 1792, 2308, 2570, 3152
NsiI	ATGCAT	1 cut(s)	2284
NspV	TTCGAA	1 cut(s)	73
OliI	CACNNNNGTG	2 cut(s)	1175, 2179
PaeR7I	CTCGAG	1 cut(s)	1121
PceI	AGGCCT	2 cut(s)	531, 870
PcsI	WCGNNNNNNNCGW	2 cut(s)	110, 324
PctI	GAATGC	4 cut(s)	1102, 2284, 2329, 2931
PdiI	GCCGGC	1 cut(s)	455
PdmI	GAANNNNTTC	2 cut(s)	1587, 3216
PfeI	GAWTC	6 cut(s)	335, 523, 1583, 1691, 2532, 2623
PflFI	GACNNNGTC	1 cut(s)	2018
PflMI	CCANNNNNTGG	1 cut(s)	944
PleI	GAGTC	3 cut(s)	1330, 1568, 2086
PluTI	GGCGCC	1 cut(s)	50
PpsI	GAGTC	3 cut(s)	1330, 1568, 2086
PpuMI	RGGWCCY	1 cut(s)	2155
PshAI	GACNNNNGTC	1 cut(s)	786
PshBI	ATTAAT	4 cut(s)	1392, 1428, 2004, 2781
PsiI	TTATAA	1 cut(s)	3282
Psp5II	RGGWCCY	1 cut(s)	2155
Psp6I	CCWGG	6 cut(s)	762, 1231, 1342, 2342, 2566, 2827
PspEI	GGTNACC	1 cut(s)	2570
PspFI	CCCAGC	1 cut(s)	2415
PspGI	CCWGG	6 cut(s)	762, 1231, 1342, 2342, 2566, 2827
PspN4I	GGNNCC	7 cut(s)	48, 936, 1147, 2156, 2157, 2508, 3185
PspPI	GGNCC	7 cut(s)	412, 899, 1750, 1946, 2155, 2517, 3165
PspPPI	RGGWCCY	1 cut(s)	2155
PstI	CTGCAG	2 cut(s)	1608, 2550
PstNI	CAGNNNCTG	3 cut(s)	1796, 1883, 2561
PsuI	RGATCY	5 cut(s)	442, 934, 1027, 2887, 3183
PsyI	GACNNNGTC	1 cut(s)	2018
PvuII	CAGCTG	3 cut(s)	2270, 2558, 2594
RsaI	GTAC	4 cut(s)	1147, 1473, 2086, 2500
RsaNI	GTAC	4 cut(s)	1146, 1472, 2085, 2499
RseI	CAYNNNNRTG	7 cut(s)	1175, 1726, 2111, 2179, 2315, 3005, 3384
Sau96I	GGNCC	7 cut(s)	412, 899, 1750, 1946, 2155, 2517, 3165
ScaI	AGTACT	1 cut(s)	2500
SchI	GAGTC	3 cut(s)	1331, 1568, 2087
ScrFI	CCNGG	7 cut(s)	764, 1233, 1344, 2344, 2568, 2829, 2899
SduI	GDGCHC	7 cut(s)	670, 1723, 2186, 2193, 2233, 2422, 2509
SfcI	CTRYAG	5 cut(s)	1593, 1604, 1673, 2546, 3073
SfoI	GGCGCC	1 cut(s)	48
Sfr274I	CTCGAG	1 cut(s)	1121
SfuI	TTCGAA	1 cut(s)	73
SinI	GGWCC	4 cut(s)	899, 2155, 2517, 3165
SlaI	CTCGAG	1 cut(s)	1121
SmiMI	CAYNNNNRTG	7 cut(s)	1175, 1726, 2111, 2179, 2315, 3005, 3384
SmlI	CTYRAG	6 cut(s)	791, 1010, 1121, 2075, 2255, 2366
SmoI	CTYRAG	6 cut(s)	791, 1010, 1121, 2075, 2255, 2366
SpeI	ACTAGT	1 cut(s)	2495
SseBI	AGGCCT	2 cut(s)	531, 870
SspDI	GGCGCC	1 cut(s)	46
StuI	AGGCCT	2 cut(s)	531, 870
StyD4I	CCNGG	7 cut(s)	762, 1231, 1342, 2342, 2566, 2827, 2897
StyI	CCWWGG	6 cut(s)	1082, 1482, 1777, 2352, 3114, 3135
TaaI	ACNGT	6 cut(s)	343, 913, 1792, 1879, 2188, 3152
TaiI	ACGT	1 cut(s)	396
TaqI	TCGA	9 cut(s)	73, 113, 338, 435, 503, 1122, 2233, 2812, 3298
TaqII	GACCGA	1 cut(s)	3324
TatI	WGTACW	1 cut(s)	2498
TauI	GCSGC	5 cut(s)	90, 290, 477, 1447, 1895
TfiI	GAWTC	6 cut(s)	335, 523, 1583, 1691, 2532, 2623
TseFI	GTSAC	7 cut(s)	92, 890, 1168, 1792, 2308, 2570, 3152
Tsp45I	GTSAC	7 cut(s)	92, 890, 1168, 1792, 2308, 2570, 3152
TspGWI	ACGGA	2 cut(s)	1835, 3443
Tth111I	GACNNNGTC	1 cut(s)	2018
Van91I	CCANNNNNTGG	1 cut(s)	944
VneI	GTGCAC	2 cut(s)	2182, 2189
VpaK11BI	GGWCC	4 cut(s)	899, 2155, 2517, 3165
VspI	ATTAAT	4 cut(s)	1392, 1428, 2004, 2781
XagI	CCTNNNNNAGG	1 cut(s)	216
XapI	RAATTY	5 cut(s)	806, 1310, 1744, 1987, 2693
XcmI	CCANNNNNNNNNTGG	3 cut(s)	2350, 2408, 2634
XhoI	CTCGAG	1 cut(s)	1121
XmnI	GAANNNNTTC	2 cut(s)	1587, 3216
ZrmI	AGTACT	1 cut(s)	2500
Zsp2I	ATGCAT	1 cut(s)	2284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.