Prupe.6G117900_v2.0.a1

Domain of unknown function (DUF296)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
8644708 .. 8647802
3095 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G117900.1

Sequence Viewer

Length: 1059 bp
ATGGAAGAGAACAACATGGTCACTACCTCCCAGCCTCCACAGACTGAAAGTAAACCGAACAATGAAGTAGAGACTTTCATGGAGCCTGTACAAATGAATATCGAGCCCAACCAAGATTTAGATCAATCCGGGGCCCCCATTGGAAGAGTGGAGCTAACAGGAACAGATGTTCTTGTGAAGAGGAAGAGGGGTAGGCCGAGGAAATATGAAATGGTTGGTGAGGAGGGAAATGTGGTGGGCTTAGTATCAGCATCACCCAGCAGTACATATTCGGGTTCATATTCGGAAAGCTTACCGAAAAGAGGAAGAGGACGCCCTAAAGGATCCGGTAAATTGCAGCTCTTGTCTCCCCGTGGTGGGTTGTCTGTGGATCCGGCTGGAGGAGGGTTTTACACTCAAGTACTGACTGCTGAGACTGGAGAGGATATTGTTCATAAGATACTTTCATTATCTGAAACGAATCCTCGATCACTTTGCATTCTTACAGCTACTGGTGTGGTTTGTAGCGCCGTCATACGCCAACCTAGTTCTTATACTGGTATTCTGAGATTCAAGGGCCGCTTTCAGATTCTCACTCTATCTGGATCATTTGTATATGATGCAACGCAAAATCGACGAGGAAAAAATGGTATGTTAAGCGTTGCACTGTGCCATCCTGATGGGAATATTTTTGGTGGTGCTGTTGCAGGCGCATTGATAGCTGCTGAGCCTGTTCAAATCATTGCTACCAGTTTTCTGCAAGAAACCAGCAGCAACACCAGCAAGGAATTGAAAAGGAGGCACTCAGCGGAATCTTCTACCTCGACTAGTATGCTAGGCAATTCATCATGCTTGGCAATGGTTCCCTTACTAATGCCTCCACCAACAATAGTTCATGATGAGAGTTGCATTTCGCCTACATCTGCTCTCTTGGAATTTCCATCCCATAGTGGAGCAGGTAACGTCATTGCTGCAAACCGTAACATGAACCCTGCTACACTTCCGGGTTTTGATCAGAATGCCTTGCAGCCAATGCCAGATCCAACAACATCTCCTCACATTGACACCTTTATTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

353

Amino Acids

37.44

Weight (kDa)

6.33

Isoelectric Point (pI)

56.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 926
AciI CCGC 2 cut(s) 559, 788
AclWI GGATC 6 cut(s) 318, 331, 365, 378, 592, 1013
AcsI RAATTY 1 cut(s) 914
AcyI GRCGYC 1 cut(s) 313
AfaI GTAC 3 cut(s) 90, 265, 402
AfiI CCNNNNNNNGG 4 cut(s) 302, 356, 357, 380
AgsI TTSAA 3 cut(s) 553, 716, 772
AhlI ACTAGT 1 cut(s) 806
AloI GAACNNNNNNTCC 2 cut(s) 153, 185
AluBI AGCT 5 cut(s) 154, 291, 340, 488, 701
AluI AGCT 5 cut(s) 154, 291, 340, 488, 701
Alw26I GTCTC 3 cut(s) 65, 351, 407
AlwI GGATC 6 cut(s) 318, 331, 365, 378, 592, 1013
AlwNI CAGNNNCTG 1 cut(s) 491
AoxI GGCC 3 cut(s) 132, 194, 556
ApaI GGGCCC 1 cut(s) 136
ApeKI GCWGC 5 cut(s) 337, 701, 750, 950, 1006
ApoI RAATTY 1 cut(s) 914
AspLEI GCGC 2 cut(s) 509, 692
AspS9I GGNCC 3 cut(s) 132, 133, 556
AsuC2I CCSGG 2 cut(s) 130, 984
AsuHPI GGTGA 2 cut(s) 230, 246
BaeGI GKGCMC 1 cut(s) 136
BamHI GGATCC 2 cut(s) 323, 370
BanII GRGCYC 2 cut(s) 108, 136
BbvI GCAGC 5 cut(s) 349, 688, 762, 937, 1018
BccI CCATC 3 cut(s) 653, 660, 928
BceAI ACGGC 1 cut(s) 494
BcgI CGANNNNNNTGC 4 cut(s) 456, 490, 793, 827
BclI TGATCA 1 cut(s) 991
BcnI CCSGG 2 cut(s) 130, 984
BcoDI GTCTC 3 cut(s) 65, 351, 407
BcuI ACTAGT 1 cut(s) 806
BfaI CTAG 3 cut(s) 525, 807, 815
BfoI RGCGCY 1 cut(s) 510
BfuAI ACCTGC 1 cut(s) 926
BisI GCNGC 6 cut(s) 338, 559, 702, 751, 951, 1007
BlpI GCTNAGC 1 cut(s) 705
BlsI GCNGC 6 cut(s) 339, 560, 703, 752, 952, 1008
BmcAI AGTACT 1 cut(s) 402
Bme1390I CCNGG 2 cut(s) 130, 984
BmgT120I GGNCC 3 cut(s) 132, 133, 556
BmiI GGNNCC 7 cut(s) 84, 133, 134, 135, 325, 372, 843
BmrFI CCNGG 2 cut(s) 130, 984
BmsI GCATC 2 cut(s) 260, 589
BpmI CTGGAG 2 cut(s) 399, 438
Bpu1102I GCTNAGC 1 cut(s) 705
BpuEI CTTGAG 1 cut(s) 381
BpuMI CCSGG 2 cut(s) 130, 984
BsaBI GATNNNNATC 1 cut(s) 120
BsaHI GRCGYC 1 cut(s) 313
BsaJI CCNNGG 3 cut(s) 129, 197, 352
BsaWI WCCGGW 1 cut(s) 326
BsaXI ACNNNNNCTCC 2 cut(s) 1015, 1045
Bsc4I CCNNNNNNNGG 4 cut(s) 302, 356, 357, 380
Bse1I ACTGG 4 cut(s) 421, 496, 541, 729
Bse3DI GCAATG 3 cut(s) 720, 843, 945
Bse8I GATNNNNATC 1 cut(s) 120
BseDI CCNNGG 3 cut(s) 129, 197, 352
BseGI GGATG 2 cut(s) 652, 920
BseJI GATNNNNATC 1 cut(s) 120
BseLI CCNNNNNNNGG 4 cut(s) 302, 356, 357, 380
BseMI GCAATG 3 cut(s) 720, 843, 945
BseMII CTCAG 4 cut(s) 402, 536, 696, 798
BseNI ACTGG 4 cut(s) 421, 496, 541, 729
BseRI GAGGAG 3 cut(s) 236, 396, 1023
BseSI GKGCMC 1 cut(s) 136
BseXI GCAGC 5 cut(s) 349, 688, 762, 937, 1018
BseYI CCCAGC 2 cut(s) 30, 257
BshFI GGCC 3 cut(s) 134, 196, 558
BsiSI CCGG 4 cut(s) 129, 327, 374, 983
BslI CCNNNNNNNGG 4 cut(s) 302, 356, 357, 380
BsmAI GTCTC 3 cut(s) 65, 351, 407
BsmI GAATGC 2 cut(s) 477, 1003
BsnI GGCC 3 cut(s) 134, 196, 558
Bsp120I GGGCCC 1 cut(s) 132
Bsp1286I GDGCHC 2 cut(s) 108, 136
Bsp1407I TGTACA 1 cut(s) 88
Bsp143I GATC 7 cut(s) 121, 323, 370, 467, 584, 991, 1018
Bsp1720I GCTNAGC 1 cut(s) 705
BspACI CCGC 2 cut(s) 559, 788
BspANI GGCC 3 cut(s) 134, 196, 558
BspCNI CTCAG 4 cut(s) 403, 537, 697, 797
BspHI TCATGA 1 cut(s) 874
BspLI GGNNCC 7 cut(s) 84, 133, 134, 135, 325, 372, 843
BspMI ACCTGC 1 cut(s) 926
BspPI GGATC 6 cut(s) 318, 331, 365, 378, 592, 1013
BsrDI GCAATG 3 cut(s) 720, 843, 945
BsrGI TGTACA 1 cut(s) 88
BsrI ACTGG 4 cut(s) 421, 496, 541, 729
BssECI CCNNGG 3 cut(s) 129, 197, 352
BssMI GATC 7 cut(s) 121, 323, 370, 467, 584, 991, 1018
BssNI GRCGYC 1 cut(s) 313
Bst4CI ACNGT 2 cut(s) 648, 959
Bst6I CTCTTC 4 cut(s) 139, 173, 179, 301
BstACI GRCGYC 1 cut(s) 313
BstAPI GCANNNNNTGC 1 cut(s) 1012
BstAUI TGTACA 1 cut(s) 88
BstC8I GCNNGC 1 cut(s) 688
BstDEI CTNAG 6 cut(s) 241, 411, 545, 705, 784, 1056
BstDSI CCRYGG 1 cut(s) 352
BstF5I GGATG 2 cut(s) 652, 920
BstH2I RGCGCY 1 cut(s) 510
BstHHI GCGC 2 cut(s) 509, 692
BstKTI GATC 7 cut(s) 124, 326, 373, 470, 587, 994, 1021
BstMAI GTCTC 3 cut(s) 65, 351, 407
BstMBI GATC 7 cut(s) 121, 323, 370, 467, 584, 991, 1018
BstMWI GCNNNNNNNGC 3 cut(s) 698, 759, 1012
BstSCI CCNGG 2 cut(s) 128, 982
BstSLI GKGCMC 1 cut(s) 136
BstV1I GCAGC 5 cut(s) 349, 688, 762, 937, 1018
BstX2I RGATCY 3 cut(s) 323, 370, 1018
BstXI CCANNNNNNTGG 1 cut(s) 659
BstYI RGATCY 3 cut(s) 323, 370, 1018
BsuRI GGCC 3 cut(s) 134, 196, 558
BtgI CCRYGG 1 cut(s) 352
BtsCI GGATG 2 cut(s) 652, 920
BtsIMutI CAGTG 1 cut(s) 644
BveI ACCTGC 1 cut(s) 926
Cac8I GCNNGC 1 cut(s) 688
CaiI CAGNNNCTG 1 cut(s) 491
CciI TCATGA 1 cut(s) 874
CfoI GCGC 2 cut(s) 509, 692
Cfr13I GGNCC 3 cut(s) 132, 133, 556
CseI GACGC 1 cut(s) 321
Csp6I GTAC 3 cut(s) 89, 264, 401
CviAII CATG 5 cut(s) 16, 79, 828, 875, 964
CviQI GTAC 3 cut(s) 89, 264, 401
DdeI CTNAG 6 cut(s) 241, 411, 545, 705, 784, 1056
DpnI GATC 7 cut(s) 123, 325, 372, 469, 586, 993, 1020
DpnII GATC 7 cut(s) 121, 323, 370, 467, 584, 991, 1018
Eam1104I CTCTTC 4 cut(s) 139, 173, 179, 301
EarI CTCTTC 4 cut(s) 139, 173, 179, 301
Eco24I GRGCYC 2 cut(s) 108, 136
EcoO109I RGGNCCY 2 cut(s) 132, 133
EcoT38I GRGCYC 2 cut(s) 108, 136
FaeI CATG 5 cut(s) 19, 82, 831, 878, 967
FalI AAGNNNNNCTT 2 cut(s) 545, 577
FatI CATG 5 cut(s) 15, 78, 827, 874, 963
FbaI TGATCA 1 cut(s) 991
Fnu4HI GCNGC 6 cut(s) 338, 559, 702, 751, 951, 1007
FokI GGATG 2 cut(s) 639, 907
FriOI GRGCYC 2 cut(s) 108, 136
Fsp4HI GCNGC 6 cut(s) 338, 559, 702, 751, 951, 1007
FspBI CTAG 3 cut(s) 525, 807, 815
GlaI GCGC 2 cut(s) 508, 691
GluI GCNGC 6 cut(s) 338, 559, 702, 751, 951, 1007
GsaI CCCAGC 2 cut(s) 34, 261
GsuI CTGGAG 2 cut(s) 399, 438
HaeII RGCGCY 1 cut(s) 510
HaeIII GGCC 3 cut(s) 134, 196, 558
HapII CCGG 4 cut(s) 129, 327, 374, 983
HgaI GACGC 1 cut(s) 321
HhaI GCGC 2 cut(s) 509, 692
Hin1I GRCGYC 1 cut(s) 313
Hin1II CATG 5 cut(s) 19, 82, 831, 878, 967
Hin6I GCGC 2 cut(s) 507, 690
HinP1I GCGC 2 cut(s) 507, 690
HindIII AAGCTT 1 cut(s) 289
HinfI GANTC 4 cut(s) 460, 549, 568, 791
HpaII CCGG 4 cut(s) 129, 327, 374, 983
HphI GGTGA 2 cut(s) 230, 246
Hpy166II GTNNAC 1 cut(s) 53
Hpy188I TCNGA 5 cut(s) 286, 454, 546, 567, 996
Hpy188III TCNNGA 3 cut(s) 582, 656, 875
Hpy8I GTNNAC 1 cut(s) 53
Hpy99I CGWCG 1 cut(s) 618
HpyCH4III ACNGT 2 cut(s) 648, 959
HpyCH4IV ACGT 1 cut(s) 942
HpyCH4V TGCA 9 cut(s) 337, 477, 602, 644, 686, 739, 888, 953, 1006
HpyF10VI GCNNNNNNNGC 3 cut(s) 698, 759, 1012
HpyF3I CTNAG 6 cut(s) 241, 411, 545, 705, 784, 1056
HpySE526I ACGT 1 cut(s) 942
Hsp92I GRCGYC 1 cut(s) 313
Hsp92II CATG 5 cut(s) 19, 82, 831, 878, 967
HspAI GCGC 2 cut(s) 507, 690
Ksp22I TGATCA 1 cut(s) 991
Kzo9I GATC 7 cut(s) 121, 323, 370, 467, 584, 991, 1018
LmnI GCTCC 3 cut(s) 82, 151, 932
Lsp1109I GCAGC 5 cut(s) 349, 688, 762, 937, 1018
LweI GCATC 2 cut(s) 260, 589
MaeI CTAG 3 cut(s) 525, 807, 815
MaeII ACGT 1 cut(s) 942
MaeIII GTNAC 3 cut(s) 19, 938, 959
MalI GATC 7 cut(s) 123, 325, 372, 469, 586, 993, 1020
MboI GATC 7 cut(s) 121, 323, 370, 467, 584, 991, 1018
MboII GAAGA 6 cut(s) 17, 156, 190, 196, 318, 786
MflI RGATCY 3 cut(s) 323, 370, 1018
MhlI GDGCHC 2 cut(s) 108, 136
MluCI AATT 4 cut(s) 332, 767, 820, 914
MmeI TCCRAC 1 cut(s) 1046
MseI TTAA 1 cut(s) 635
MslI CAYNNNNRTG 1 cut(s) 657
MspA1I CMGCKG 1 cut(s) 788
MspI CCGG 4 cut(s) 129, 327, 374, 983
MspR9I CCNGG 2 cut(s) 130, 984
Mva1269I GAATGC 2 cut(s) 477, 1003
MwoI GCNNNNNNNGC 3 cut(s) 698, 759, 1012
NciI CCSGG 2 cut(s) 130, 984
NdeII GATC 7 cut(s) 121, 323, 370, 467, 584, 991, 1018
NlaIII CATG 5 cut(s) 19, 82, 831, 878, 967
NlaIV GGNNCC 7 cut(s) 84, 133, 134, 135, 325, 372, 843
NmeAIII GCCGAG 1 cut(s) 222
NmuCI GTSAC 1 cut(s) 19
PagI TCATGA 1 cut(s) 874
PctI GAATGC 2 cut(s) 477, 1003
PfeI GAWTC 4 cut(s) 460, 549, 568, 791
PkrI GCNGC 6 cut(s) 339, 560, 703, 752, 952, 1008
PspFI CCCAGC 2 cut(s) 30, 257
PspN4I GGNNCC 7 cut(s) 84, 133, 134, 135, 325, 372, 843
PspOMI GGGCCC 1 cut(s) 132
PspPI GGNCC 3 cut(s) 132, 133, 556
PstNI CAGNNNCTG 1 cut(s) 491
PsuI RGATCY 3 cut(s) 323, 370, 1018
RsaI GTAC 3 cut(s) 90, 265, 402
RsaNI GTAC 3 cut(s) 89, 264, 401
RseI CAYNNNNRTG 1 cut(s) 657
SaqAI TTAA 1 cut(s) 635
SatI GCNGC 6 cut(s) 338, 559, 702, 751, 951, 1007
Sau3AI GATC 7 cut(s) 121, 323, 370, 467, 584, 991, 1018
Sau96I GGNCC 3 cut(s) 132, 133, 556
ScaI AGTACT 1 cut(s) 402
ScrFI CCNGG 2 cut(s) 130, 984
SduI GDGCHC 2 cut(s) 108, 136
SfaNI GCATC 2 cut(s) 260, 589
SmiMI CAYNNNNRTG 1 cut(s) 657
SmlI CTYRAG 1 cut(s) 396
SmoI CTYRAG 1 cut(s) 396
SpeI ACTAGT 1 cut(s) 806
Sse9I AATT 4 cut(s) 332, 767, 820, 914
SsiI CCGC 2 cut(s) 559, 788
SspI AATATT 1 cut(s) 667
SspMI CTAG 3 cut(s) 525, 807, 815
StyD4I CCNGG 2 cut(s) 128, 982
TaaI ACNGT 2 cut(s) 648, 959
TaiI ACGT 1 cut(s) 945
TaqI TCGA 4 cut(s) 102, 466, 613, 803
TasI AATT 4 cut(s) 332, 767, 820, 914
TatI WGTACW 3 cut(s) 88, 263, 400
TauI GCSGC 1 cut(s) 561
TfiI GAWTC 4 cut(s) 460, 549, 568, 791
Tru1I TTAA 1 cut(s) 635
Tru9I TTAA 1 cut(s) 635
TscAI CASTG 1 cut(s) 651
TseFI GTSAC 1 cut(s) 19
TseI GCWGC 5 cut(s) 337, 701, 750, 950, 1006
Tsp45I GTSAC 1 cut(s) 19
TspRI CASTG 1 cut(s) 651
XapI RAATTY 1 cut(s) 914
XcmI CCANNNNNNNNNTGG 1 cut(s) 145
XspI CTAG 3 cut(s) 525, 807, 815
ZrmI AGTACT 1 cut(s) 402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.