Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0007736

Physical Location & Seq

Genomic Coordinates Reverse (-)

11158746 .. 11163954

Gene Structure 5209 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G137600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1038 bp

ATGGCTCTGGTCCCATCTCCAGCTCTGGTCGCCGAGGTTGAGATGGGTGCTGACCCCTCCGCACCCACTGTTCGAGCCACCGTGGTCCAAGCCTCCACTGTCTTCTACGACACTCCTTCCACTTTAGATAAGGCTGAGAGGTTATTGGCTGAAGCAGCTGGGTATGGTGCCCAGTTGGTTGTGTTTCCGGAAGCTTTTGTGGGTGGTTATCCACGTGGGTCAAATTTTGGCATTGTCATTGGGAACAGAACAGCTAAGGGTAAAGAAGAGTTCCGAAAGTATCATGCTTCAGCCATTGATGTTCCTGGTCCTGAAGTTGATCGATTGGCAGCAATGGCTGGAAAGTACAAGGTATTCTTGGTAATGGGTGTGATAGAGAGAGATGGATATACACTCTATTGCACTGTTCTGTTTTTTGATTCTCAAGGTTCCTACTTGGGAAAGCACCGAAAAATCATGCCCACAGCATTGGAGCGAATTATTTGGGGGTTTGGAGATGGCTCCACGATTCCCGTGTTTGAGACTCCAATTGGAAAAATAGGTGCTGCCATTTGTTGGGAAAATAGGATGCCACTGCTAAGGACAGCAATGTATGCTAAAGGCATTGAAATATATTGTGCCCCTACCGCTGATTCCAGGGATGTATGGCAAGCATCAATGACTCATATTGCTTTAGAGGGTGGGTGTTTTGTCTTATCAGCCAATCAATTCTGTCGAAGGAAAGACTACCCCCCTCCTCCAGAATATGTATTTGCTGGCACAGAAGAGGAACTTACTCCAGATTCTGTTGTCTGTGCTGGAGGCAGTGTCATTATATCACCATCAGGGGCTATTCTCGCTGGACCCAATTATGATGGGGAGGCACTCATCTCAGCAGATCTTGATCTTGGAGAAATAGCGAGGGAGAAATTTGCTTTCGATGTGGTTGGACACTATTCACGGCCTGAAGTGCTTAGCTTGACTGTCAAGGACCATCCAACAAATCCAGTGACTTTTGTGGCGGCCTCAACAAAGACTGAAGTCTCACATACACCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00380 ko00460 ko00627 ko00643 ko00910 ko01100 ko01110 ko01120 map00380 map00460 map00627 map00643 map00910 map01100 map01110 map01120

Pfam Domains

Protein Families

CN_hydrolase

Protein Analysis

346

Amino Acids

37.1

Weight (kDa)

5.18

Isoelectric Point (pI)

39.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007736)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44300 AT3G44310 AT3G44310 AT3G44310 AT3G44310 AT3G44320 AT5G22300 AT5G22300
fragaria_vesca	FvH4_3g25810 FvH4_3g25810 FvH4_3g25810
malus_domestica	MD03G1150700.v1.1
prunus_persica	Prupe.6G137600_v2.0.a1
pyrus_communis	pycom03g10480
rosa_chinensis	RchiOBHm_Chr5g0047031
rosa_laevigata	RLG00000034459
rosa_multiflora	Rmu_sc0002756.1_g000007 Rmu_sc0005544.1_g000009
rosa_roxburghii	Rroxscaffold_1G00034410
rosa_rugosa	Rorug05G0233300
rosa_samantha	Rh5AG312500 Rh5BG321600 Rh5CG347800
rosa_wichuraiana	Rw5G029210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	167
AccB7I	CCANNNNNTGG	1 cut(s)	555
AccIII	TCCGGA	1 cut(s)	187
AciI	CCGC	3 cut(s)	60, 627, 1001
AcsI	RAATTY	2 cut(s)	223, 908
AcuI	CTGAAG	5 cut(s)	171, 273, 333, 966, 1038
AcvI	CACGTG	1 cut(s)	215
AfaI	GTAC	1 cut(s)	347
AfiI	CCNNNNNNNGG	1 cut(s)	555
AgsI	TTSAA	1 cut(s)	608
AjnI	CCWGG	2 cut(s)	304, 635
AluBI	AGCT	5 cut(s)	23, 158, 194, 254, 957
AluI	AGCT	5 cut(s)	23, 158, 194, 254, 957
Alw26I	GTCTC	2 cut(s)	515, 1027
AlwNI	CAGNNNCTG	1 cut(s)	785
Aor13HI	TCCGGA	1 cut(s)	187
AoxI	GGCC	2 cut(s)	941, 1002
ApeKI	GCWGC	3 cut(s)	155, 329, 545
ApoI	RAATTY	2 cut(s)	223, 908
AspS9I	GGNCC	5 cut(s)	10, 85, 308, 842, 970
AsuHPI	GGTGA	1 cut(s)	810
AvaII	GGWCC	5 cut(s)	10, 85, 308, 842, 970
BaeGI	GKGCMC	2 cut(s)	172, 622
BanI	GGYRCC	1 cut(s)	167
BbrPI	CACGTG	1 cut(s)	215
BbsI	GAAGAC	1 cut(s)	94
BbvI	GCAGC	3 cut(s)	167, 341, 532
BccI	CCATC	7 cut(s)	22, 37, 377, 491, 829, 848, 981
BceAI	ACGGC	1 cut(s)	956
BciT130I	CCWGG	2 cut(s)	306, 637
BcoDI	GTCTC	2 cut(s)	515, 1027
BglII	AGATCT	1 cut(s)	877
BisI	GCNGC	4 cut(s)	156, 330, 546, 1002
BlpI	GCTNAGC	1 cut(s)	953
BlsI	GCNGC	4 cut(s)	157, 331, 547, 1003
Bme1390I	CCNGG	2 cut(s)	306, 637
Bme18I	GGWCC	5 cut(s)	10, 85, 308, 842, 970
BmgT120I	GGNCC	5 cut(s)	10, 85, 308, 842, 970
BmiI	GGNNCC	5 cut(s)	12, 169, 430, 502, 844
BmrFI	CCNGG	2 cut(s)	306, 637
BmrI	ACTGGG	1 cut(s)	166
BmsI	GCATC	2 cut(s)	558, 662
BmuI	ACTGGG	1 cut(s)	166
BoxI	GACNNNNGTC	1 cut(s)	1019
BpiI	GAAGAC	1 cut(s)	94
BpmI	CTGGAG	3 cut(s)	723, 762, 819
Bpu10I	CCTNAGC	2 cut(s)	255, 578
Bpu1102I	GCTNAGC	1 cut(s)	953
BpuEI	CTTGAG	1 cut(s)	408
Bsa29I	ATCGAT	1 cut(s)	322
BsaAI	YACGTR	1 cut(s)	215
BsaBI	GATNNNNATC	1 cut(s)	882
BsaJI	CCNNGG	3 cut(s)	33, 81, 636
BsaWI	WCCGGW	1 cut(s)	187
BsaXI	ACNNNNNCTCC	2 cut(s)	792, 822
Bsc4I	CCNNNNNNNGG	1 cut(s)	555
Bse1I	ACTGG	2 cut(s)	172, 986
Bse3DI	GCAATG	2 cut(s)	339, 594
Bse8I	GATNNNNATC	1 cut(s)	882
BseAI	TCCGGA	1 cut(s)	187
BseBI	CCWGG	2 cut(s)	306, 637
BseCI	ATCGAT	1 cut(s)	322
BseDI	CCNNGG	3 cut(s)	33, 81, 636
BseGI	GGATG	3 cut(s)	573, 646, 973
BseJI	GATNNNNATC	1 cut(s)	882
BseLI	CCNNNNNNNGG	1 cut(s)	555
BseMI	GCAATG	2 cut(s)	339, 594
BseMII	CTCAG	2 cut(s)	126, 885
BseNI	ACTGG	2 cut(s)	172, 986
BseRI	GAGGAG	1 cut(s)	726
BseSI	GKGCMC	2 cut(s)	172, 622
BseXI	GCAGC	3 cut(s)	167, 341, 532
BseYI	CCCAGC	1 cut(s)	158
BshFI	GGCC	2 cut(s)	943, 1004
BshNI	GGYRCC	1 cut(s)	167
BshVI	ATCGAT	1 cut(s)	322
BsiSI	CCGG	1 cut(s)	188
BslI	CCNNNNNNNGG	1 cut(s)	555
BsmAI	GTCTC	2 cut(s)	515, 1027
BsnI	GGCC	2 cut(s)	943, 1004
Bsp1286I	GDGCHC	2 cut(s)	172, 622
Bsp13I	TCCGGA	1 cut(s)	187
Bsp143I	GATC	3 cut(s)	319, 877, 883
Bsp1720I	GCTNAGC	1 cut(s)	953
BspACI	CCGC	3 cut(s)	60, 627, 1001
BspANI	GGCC	2 cut(s)	943, 1004
BspCNI	CTCAG	2 cut(s)	127, 884
BspDI	ATCGAT	1 cut(s)	322
BspEI	TCCGGA	1 cut(s)	187
BspLI	GGNNCC	5 cut(s)	12, 169, 430, 502, 844
BspT107I	GGYRCC	1 cut(s)	167
BsrDI	GCAATG	2 cut(s)	339, 594
BsrI	ACTGG	2 cut(s)	172, 986
BssECI	CCNNGG	3 cut(s)	33, 81, 636
BssMI	GATC	3 cut(s)	319, 877, 883
Bst2UI	CCWGG	2 cut(s)	306, 637
Bst4CI	ACNGT	5 cut(s)	70, 82, 100, 406, 964
Bst6I	CTCTTC	2 cut(s)	261, 759
BstAPI	GCANNNNNTGC	1 cut(s)	593
BstBAI	YACGTR	1 cut(s)	215
BstC8I	GCNNGC	2 cut(s)	651, 757
BstDEI	CTNAG	5 cut(s)	135, 255, 578, 871, 953
BstDSI	CCRYGG	1 cut(s)	81
BstF5I	GGATG	3 cut(s)	573, 646, 973
BstKTI	GATC	3 cut(s)	322, 880, 886
BstMAI	GTCTC	2 cut(s)	515, 1027
BstMBI	GATC	3 cut(s)	319, 877, 883
BstMWI	GCNNNNNNNGC	7 cut(s)	29, 155, 335, 593, 626, 836, 949
BstNI	CCWGG	2 cut(s)	306, 637
BstPAI	GACNNNNGTC	1 cut(s)	1019
BstSCI	CCNGG	2 cut(s)	304, 635
BstSLI	GKGCMC	2 cut(s)	172, 622
BstV1I	GCAGC	3 cut(s)	167, 341, 532
BstV2I	GAAGAC	1 cut(s)	94
BstX2I	RGATCY	1 cut(s)	877
BstXI	CCANNNNNNTGG	1 cut(s)	469
BstYI	RGATCY	1 cut(s)	877
Bsu15I	ATCGAT	1 cut(s)	322
BsuRI	GGCC	2 cut(s)	943, 1004
BsuTUI	ATCGAT	1 cut(s)	322
BtgI	CCRYGG	1 cut(s)	81
BtsCI	GGATG	3 cut(s)	573, 646, 973
BtsI	GCAGTG	2 cut(s)	572, 811
BtsIMutI	CAGTG	6 cut(s)	66, 96, 402, 572, 811, 993
Cac8I	GCNNGC	2 cut(s)	651, 757
CaiI	CAGNNNCTG	1 cut(s)	785
Cfr13I	GGNCC	5 cut(s)	10, 85, 308, 842, 970
ClaI	ATCGAT	1 cut(s)	322
Csp6I	GTAC	1 cut(s)	346
CviAII	CATG	2 cut(s)	284, 457
CviQI	GTAC	1 cut(s)	346
DdeI	CTNAG	5 cut(s)	135, 255, 578, 871, 953
DpnI	GATC	3 cut(s)	321, 879, 885
DpnII	GATC	3 cut(s)	319, 877, 883
Eam1104I	CTCTTC	2 cut(s)	261, 759
EarI	CTCTTC	2 cut(s)	261, 759
Eco47I	GGWCC	5 cut(s)	10, 85, 308, 842, 970
Eco57I	CTGAAG	5 cut(s)	171, 273, 333, 966, 1038
Eco72I	CACGTG	1 cut(s)	215
EcoRII	CCWGG	2 cut(s)	304, 635
FaeI	CATG	2 cut(s)	287, 460
FalI	AAGNNNNNCTT	4 cut(s)	341, 373, 756, 788
FatI	CATG	2 cut(s)	283, 456
Fnu4HI	GCNGC	4 cut(s)	156, 330, 546, 1002
FokI	GGATG	3 cut(s)	580, 653, 960
Fsp4HI	GCNGC	4 cut(s)	156, 330, 546, 1002
GluI	GCNGC	4 cut(s)	156, 330, 546, 1002
GsaI	CCCAGC	1 cut(s)	162
GsuI	CTGGAG	3 cut(s)	723, 762, 819
HaeIII	GGCC	2 cut(s)	943, 1004
HapII	CCGG	1 cut(s)	188
Hin1II	CATG	2 cut(s)	287, 460
HindIII	AAGCTT	1 cut(s)	192
HinfI	GANTC	6 cut(s)	419, 508, 523, 632, 661, 782
HpaII	CCGG	1 cut(s)	188
HphI	GGTGA	1 cut(s)	810
Hpy188I	TCNGA	1 cut(s)	275
Hpy188III	TCNNGA	5 cut(s)	188, 311, 740, 779, 881
HpyAV	CCTTC	2 cut(s)	126, 711
HpyCH4III	ACNGT	5 cut(s)	70, 82, 100, 406, 964
HpyCH4IV	ACGT	1 cut(s)	214
HpyCH4V	TGCA	1 cut(s)	402
HpyF10VI	GCNNNNNNNGC	7 cut(s)	29, 155, 335, 593, 626, 836, 949
HpyF3I	CTNAG	5 cut(s)	135, 255, 578, 871, 953
HpySE526I	ACGT	1 cut(s)	214
Hsp92II	CATG	2 cut(s)	287, 460
Kpn2I	TCCGGA	1 cut(s)	187
Kzo9I	GATC	3 cut(s)	319, 877, 883
LmnI	GCTCC	2 cut(s)	472, 506
Lsp1109I	GCAGC	3 cut(s)	167, 341, 532
LweI	GCATC	2 cut(s)	558, 662
MaeII	ACGT	1 cut(s)	214
MaeIII	GTNAC	1 cut(s)	988
MalI	GATC	3 cut(s)	321, 879, 885
MboI	GATC	3 cut(s)	319, 877, 883
MboII	GAAGA	3 cut(s)	94, 278, 776
MfeI	CAATTG	1 cut(s)	528
MflI	RGATCY	1 cut(s)	877
MhlI	GDGCHC	2 cut(s)	172, 622
MluCI	AATT	6 cut(s)	223, 477, 528, 707, 847, 908
MlyI	GAGTC	2 cut(s)	517, 655
MmeI	TCCRAC	2 cut(s)	907, 1001
MroI	TCCGGA	1 cut(s)	187
MspA1I	CMGCKG	2 cut(s)	158, 629
MspI	CCGG	1 cut(s)	188
MspR9I	CCNGG	2 cut(s)	306, 637
MunI	CAATTG	1 cut(s)	528
MvaI	CCWGG	2 cut(s)	306, 637
MwoI	GCNNNNNNNGC	7 cut(s)	29, 155, 335, 593, 626, 836, 949
NdeII	GATC	3 cut(s)	319, 877, 883
NlaIII	CATG	2 cut(s)	287, 460
NlaIV	GGNNCC	5 cut(s)	12, 169, 430, 502, 844
NmeAIII	GCCGAG	1 cut(s)	58
NmuCI	GTSAC	1 cut(s)	988
PfeI	GAWTC	4 cut(s)	419, 508, 632, 782
PflMI	CCANNNNNTGG	1 cut(s)	555
PkrI	GCNGC	4 cut(s)	157, 331, 547, 1003
PleI	GAGTC	2 cut(s)	517, 655
PmaCI	CACGTG	1 cut(s)	215
PmlI	CACGTG	1 cut(s)	215
PpsI	GAGTC	2 cut(s)	517, 655
Ppu21I	YACGTR	1 cut(s)	215
PshAI	GACNNNNGTC	1 cut(s)	1019
Psp6I	CCWGG	2 cut(s)	304, 635
PspCI	CACGTG	1 cut(s)	215
PspFI	CCCAGC	1 cut(s)	158
PspGI	CCWGG	2 cut(s)	304, 635
PspN4I	GGNNCC	5 cut(s)	12, 169, 430, 502, 844
PspPI	GGNCC	5 cut(s)	10, 85, 308, 842, 970
PstNI	CAGNNNCTG	1 cut(s)	785
PsuI	RGATCY	1 cut(s)	877
PvuII	CAGCTG	1 cut(s)	158
RsaI	GTAC	1 cut(s)	347
RsaNI	GTAC	1 cut(s)	346
SatI	GCNGC	4 cut(s)	156, 330, 546, 1002
Sau3AI	GATC	3 cut(s)	319, 877, 883
Sau96I	GGNCC	5 cut(s)	10, 85, 308, 842, 970
SchI	GAGTC	2 cut(s)	517, 655
ScrFI	CCNGG	2 cut(s)	306, 637
SduI	GDGCHC	2 cut(s)	172, 622
SfaNI	GCATC	2 cut(s)	558, 662
SinI	GGWCC	5 cut(s)	10, 85, 308, 842, 970
SmlI	CTYRAG	1 cut(s)	423
SmoI	CTYRAG	1 cut(s)	423
Sse9I	AATT	6 cut(s)	223, 477, 528, 707, 847, 908
SsiI	CCGC	3 cut(s)	60, 627, 1001
StyD4I	CCNGG	2 cut(s)	304, 635
TaaI	ACNGT	5 cut(s)	70, 82, 100, 406, 964
TaiI	ACGT	1 cut(s)	217
TaqI	TCGA	4 cut(s)	73, 322, 715, 918
TasI	AATT	6 cut(s)	223, 477, 528, 707, 847, 908
TatI	WGTACW	1 cut(s)	345
TauI	GCSGC	1 cut(s)	1004
TfiI	GAWTC	4 cut(s)	419, 508, 632, 782
TscAI	CASTG	6 cut(s)	73, 103, 409, 579, 811, 993
TseFI	GTSAC	1 cut(s)	988
TseI	GCWGC	3 cut(s)	155, 329, 545
Tsp45I	GTSAC	1 cut(s)	988
TspRI	CASTG	6 cut(s)	73, 103, 409, 579, 811, 993
Van91I	CCANNNNNTGG	1 cut(s)	555
VpaK11BI	GGWCC	5 cut(s)	10, 85, 308, 842, 970
XapI	RAATTY	2 cut(s)	223, 908

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.