Prupe.6G161400_v2.0.a1

4,5-DOPA dioxygenase extradiol-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
15024046 .. 15025140
1095 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G161400.1

Sequence Viewer

Length: 825 bp
ATGGCAGTTCAGGACACGTTTTACATATCCCATGGATCCCCTACGCTGAGCATCGACGAGTCAATCCCAGCCAGAAAATTCCTCCAGTCATGGAAGCAAAACGTGTATCCAAACAAACCCAATTCCATTCTCATCATCTCCGGCCACTGGGAGACGTCTGTCCCCACCGTCAACGCCATCTCCGGCCGCCACGACACCATCTACGACTTCTACGGCTTCCCCAAGTCCATGTACCAGCTCAAGTACCCCGCTCCGGGCTCCCCCAACCTCGCCGGCCGCGTCAAGGACCTACTCACCGCCTCCGGCTTCCCACGCGTCGATGTCGATGCCAAACGTGGCCTTGACCACGGAGCGTGGGTCCCACTTATGTTCATGTACCCGGAGGCAGACATCCCTGTCTGTCAGCTGTCTATCCAGACAGACAGGGACGCCACTTATCACTACAACATGGGGAGGGCACTGGCCCCACTCAAAAACGAGGGCGTCCTTGTGGTGGGGTCTGGCAGTGCCACTCACAACTTGAGGGCGCTGAGGGAGATCAGGGGTGGTGGTGGTGGTGCTGGATCCATTGTTCCGTGGGCCCTGGAGTTCGACACGTGGCTTAAGGATGCTCTGCTTGAAGGGAGGTACGAAGACGTGAACCAGTATGAGGAGAAGGCCCCTTATGCGAAAATGGCTCACCCTTGGCCTGATCACTTCTACCCATTGCATGTGGCCACGGGAGCTGCTGGCTCAGATGCCAAGGCTAAGCTCATTCATGGGAGCTGGGATCTTGGTGCTCTTTCTTATGCCTCCTACCAGTTTACATCACCACCTACCAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

275

Amino Acids

30.16

Weight (kDa)

6.35

Isoelectric Point (pI)

39.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 395
AatII GACGTC 1 cut(s) 158
AccBSI CCGCTC 1 cut(s) 251
AccII CGCG 2 cut(s) 279, 315
AciI CCGC 4 cut(s) 187, 249, 277, 297
AclWI GGATC 5 cut(s) 30, 43, 558, 571, 777
AcoI YGGCCR 4 cut(s) 142, 184, 274, 714
AcsI RAATTY 1 cut(s) 77
AcvI CACGTG 1 cut(s) 597
AcyI GRCGYC 3 cut(s) 155, 429, 483
AfaI GTAC 4 cut(s) 233, 245, 377, 629
AfiI CCNNNNNNNGG 6 cut(s) 147, 253, 254, 283, 493, 649
AflII CTTAAG 1 cut(s) 602
AflIII ACRYGT 4 cut(s) 15, 102, 313, 594
AgsI TTSAA 1 cut(s) 620
AjiI CACGTC 1 cut(s) 637
AjnI CCWGG 1 cut(s) 582
AloI GAACNNNNNNTCC 2 cut(s) 555, 587
AluBI AGCT 6 cut(s) 238, 406, 725, 751, 765, 822
AluI AGCT 6 cut(s) 238, 406, 725, 751, 765, 822
Alw21I GWGCWC 1 cut(s) 781
Alw26I GTCTC 1 cut(s) 146
AlwI GGATC 5 cut(s) 30, 43, 558, 571, 777
AoxI GGCC 9 cut(s) 142, 184, 274, 337, 462, 579, 657, 686, 714
ApaI GGGCCC 1 cut(s) 583
ApeKI GCWGC 1 cut(s) 725
ApoI RAATTY 1 cut(s) 77
AspLEI GCGC 1 cut(s) 529
AspS9I GGNCC 6 cut(s) 286, 358, 463, 579, 580, 658
AsuC2I CCSGG 2 cut(s) 255, 380
AsuHPI GGTGA 3 cut(s) 286, 671, 801
AvaII GGWCC 2 cut(s) 286, 358
BaeGI GKGCMC 2 cut(s) 460, 583
BalI TGGCCA 1 cut(s) 716
BamHI GGATCC 2 cut(s) 35, 563
BanII GRGCYC 2 cut(s) 260, 583
BbrPI CACGTG 1 cut(s) 597
BbsI GAAGAC 1 cut(s) 639
Bbv12I GWGCWC 1 cut(s) 781
BbvCI CCTCAGC 1 cut(s) 530
BbvI GCAGC 1 cut(s) 712
BccI CCATC 2 cut(s) 185, 206
BceAI ACGGC 1 cut(s) 229
BcgI CGANNNNNNTGC 2 cut(s) 308, 342
BciT130I CCWGG 1 cut(s) 584
BciVI GTATCC 1 cut(s) 117
BclI TGATCA 1 cut(s) 691
BcnI CCSGG 2 cut(s) 255, 380
BcoDI GTCTC 1 cut(s) 146
BfoI RGCGCY 1 cut(s) 530
BfrI CTTAAG 1 cut(s) 602
BfuI GTATCC 1 cut(s) 117
BisI GCNGC 3 cut(s) 187, 277, 726
BlpI GCTNAGC 2 cut(s) 47, 747
BlsI GCNGC 3 cut(s) 188, 278, 727
Bme1390I CCNGG 3 cut(s) 255, 380, 584
Bme18I GGWCC 2 cut(s) 286, 358
BmgBI CACGTC 1 cut(s) 637
BmgT120I GGNCC 6 cut(s) 286, 358, 463, 579, 580, 658
BmiI GGNNCC 8 cut(s) 37, 259, 359, 360, 465, 565, 581, 660
BmrFI CCNGG 3 cut(s) 255, 380, 584
BmrI ACTGGG 1 cut(s) 157
BmsI GCATC 4 cut(s) 60, 316, 598, 727
BmuI ACTGGG 1 cut(s) 157
BoxI GACNNNNGTC 1 cut(s) 158
BpiI GAAGAC 1 cut(s) 639
BpmI CTGGAG 2 cut(s) 68, 605
Bpu10I CCTNAGC 1 cut(s) 530
Bpu1102I GCTNAGC 2 cut(s) 47, 747
BpuEI CTTGAG 2 cut(s) 224, 541
BpuMI CCSGG 2 cut(s) 255, 380
BsaAI YACGTR 1 cut(s) 597
BsaHI GRCGYC 3 cut(s) 155, 429, 483
BsaJI CCNNGG 7 cut(s) 31, 346, 575, 582, 683, 717, 741
BsaXI ACNNNNNCTCC 4 cut(s) 164, 194, 342, 372
Bsc4I CCNNNNNNNGG 6 cut(s) 147, 253, 254, 283, 493, 649
Bse118I RCCGGY 1 cut(s) 272
Bse1I ACTGG 5 cut(s) 85, 152, 465, 643, 799
Bse3DI GCAATG 1 cut(s) 704
BseBI CCWGG 1 cut(s) 584
BseDI CCNNGG 7 cut(s) 31, 346, 575, 582, 683, 717, 741
BseGI GGATG 2 cut(s) 390, 613
BseLI CCNNNNNNNGG 6 cut(s) 147, 253, 254, 283, 493, 649
BseMI GCAATG 1 cut(s) 704
BseMII CTCAG 3 cut(s) 38, 521, 747
BseNI ACTGG 5 cut(s) 85, 152, 465, 643, 799
BseRI GAGGAG 1 cut(s) 665
BseSI GKGCMC 2 cut(s) 460, 583
BseX3I CGGCCG 2 cut(s) 184, 274
BseXI GCAGC 1 cut(s) 712
BseYI CCCAGC 2 cut(s) 67, 765
Bsh1236I CGCG 2 cut(s) 279, 315
Bsh1285I CGRYCG 2 cut(s) 187, 277
BshFI GGCC 9 cut(s) 144, 186, 276, 339, 464, 581, 659, 688, 716
BsiEI CGRYCG 2 cut(s) 187, 277
BsiHKAI GWGCWC 1 cut(s) 781
BsiSI CCGG 6 cut(s) 141, 183, 254, 273, 303, 380
BslFI GGGAC 3 cut(s) 146, 344, 440
BslI CCNNNNNNNGG 6 cut(s) 147, 253, 254, 283, 493, 649
BsmAI GTCTC 1 cut(s) 146
BsmBI CGTCTC 1 cut(s) 146
BsmFI GGGAC 3 cut(s) 146, 344, 440
BsnI GGCC 9 cut(s) 144, 186, 276, 339, 464, 581, 659, 688, 716
Bsp120I GGGCCC 1 cut(s) 579
Bsp1286I GDGCHC 4 cut(s) 260, 460, 583, 781
Bsp143I GATC 5 cut(s) 35, 537, 563, 691, 769
Bsp1720I GCTNAGC 2 cut(s) 47, 747
Bsp19I CCATGG 1 cut(s) 31
BspACI CCGC 4 cut(s) 187, 249, 277, 297
BspANI GGCC 9 cut(s) 144, 186, 276, 339, 464, 581, 659, 688, 716
BspCNI CTCAG 3 cut(s) 39, 522, 746
BspFNI CGCG 2 cut(s) 279, 315
BspLI GGNNCC 8 cut(s) 37, 259, 359, 360, 465, 565, 581, 660
BspPI GGATC 5 cut(s) 30, 43, 558, 571, 777
BspTI CTTAAG 1 cut(s) 602
BsrBI CCGCTC 1 cut(s) 251
BsrDI GCAATG 1 cut(s) 704
BsrFI RCCGGY 1 cut(s) 272
BsrI ACTGG 5 cut(s) 85, 152, 465, 643, 799
BssAI RCCGGY 1 cut(s) 272
BssECI CCNNGG 7 cut(s) 31, 346, 575, 582, 683, 717, 741
BssMI GATC 5 cut(s) 35, 537, 563, 691, 769
BssNI GRCGYC 3 cut(s) 155, 429, 483
BssT1I CCWWGG 3 cut(s) 31, 683, 741
Bst2UI CCWGG 1 cut(s) 584
Bst4CI ACNGT 1 cut(s) 169
BstACI GRCGYC 3 cut(s) 155, 429, 483
BstAFI CTTAAG 1 cut(s) 602
BstBAI YACGTR 1 cut(s) 597
BstC8I GCNNGC 2 cut(s) 274, 730
BstDEI CTNAG 4 cut(s) 47, 530, 733, 747
BstDSI CCRYGG 4 cut(s) 31, 346, 575, 717
BstF5I GGATG 2 cut(s) 390, 613
BstFNI CGCG 2 cut(s) 279, 315
BstH2I RGCGCY 1 cut(s) 530
BstHHI GCGC 1 cut(s) 529
BstKTI GATC 5 cut(s) 38, 540, 566, 694, 772
BstMAI GTCTC 1 cut(s) 146
BstMBI GATC 5 cut(s) 35, 537, 563, 691, 769
BstMCI CGRYCG 2 cut(s) 187, 277
BstMWI GCNNNNNNNGC 4 cut(s) 312, 665, 674, 722
BstNI CCWGG 1 cut(s) 584
BstNSI RCATGY 1 cut(s) 713
BstPAI GACNNNNGTC 1 cut(s) 158
BstSCI CCNGG 3 cut(s) 253, 378, 582
BstSLI GKGCMC 2 cut(s) 460, 583
BstUI CGCG 2 cut(s) 279, 315
BstV1I GCAGC 1 cut(s) 712
BstV2I GAAGAC 1 cut(s) 639
BstX2I RGATCY 3 cut(s) 35, 563, 769
BstYI RGATCY 3 cut(s) 35, 563, 769
BstZI CGGCCG 2 cut(s) 184, 274
BsuI GTATCC 1 cut(s) 117
BsuRI GGCC 9 cut(s) 144, 186, 276, 339, 464, 581, 659, 688, 716
BtgI CCRYGG 4 cut(s) 31, 346, 575, 717
BtrI CACGTC 1 cut(s) 637
BtsCI GGATG 2 cut(s) 390, 613
BtsI GCAGTG 1 cut(s) 511
BtsIMutI CAGTG 3 cut(s) 145, 458, 511
Cac8I GCNNGC 2 cut(s) 274, 730
CfoI GCGC 1 cut(s) 529
Cfr10I RCCGGY 1 cut(s) 272
Cfr13I GGNCC 6 cut(s) 286, 358, 463, 579, 580, 658
CseI GACGC 4 cut(s) 268, 304, 437, 472
Csp6I GTAC 4 cut(s) 232, 244, 376, 628
CviAII CATG 7 cut(s) 32, 90, 229, 373, 448, 710, 758
CviQI GTAC 4 cut(s) 232, 244, 376, 628
DdeI CTNAG 4 cut(s) 47, 530, 733, 747
DpnI GATC 5 cut(s) 37, 539, 565, 693, 771
DpnII GATC 5 cut(s) 35, 537, 563, 691, 769
DrdI GACNNNNNNGTC 1 cut(s) 395
DseDI GACNNNNNNGTC 1 cut(s) 395
EaeI YGGCCR 4 cut(s) 142, 184, 274, 714
EagI CGGCCG 2 cut(s) 184, 274
EclXI CGGCCG 2 cut(s) 184, 274
Eco130I CCWWGG 3 cut(s) 31, 683, 741
Eco24I GRGCYC 2 cut(s) 260, 583
Eco47I GGWCC 2 cut(s) 286, 358
Eco52I CGGCCG 2 cut(s) 184, 274
Eco72I CACGTG 1 cut(s) 597
EcoO109I RGGNCCY 4 cut(s) 286, 358, 580, 658
EcoRII CCWGG 1 cut(s) 582
EcoT14I CCWWGG 3 cut(s) 31, 683, 741
EcoT38I GRGCYC 2 cut(s) 260, 583
ErhI CCWWGG 3 cut(s) 31, 683, 741
Esp3I CGTCTC 1 cut(s) 146
FaeI CATG 7 cut(s) 35, 93, 232, 376, 451, 713, 761
FaqI GGGAC 3 cut(s) 146, 344, 440
FatI CATG 7 cut(s) 31, 89, 228, 372, 447, 709, 757
FauI CCCGC 1 cut(s) 256
FbaI TGATCA 1 cut(s) 691
Fnu4HI GCNGC 3 cut(s) 187, 277, 726
FokI GGATG 2 cut(s) 377, 620
FriOI GRGCYC 2 cut(s) 260, 583
Fsp4HI GCNGC 3 cut(s) 187, 277, 726
GlaI GCGC 1 cut(s) 528
GluI GCNGC 3 cut(s) 187, 277, 726
GsaI CCCAGC 2 cut(s) 71, 769
GsuI CTGGAG 2 cut(s) 68, 605
HaeII RGCGCY 1 cut(s) 530
HaeIII GGCC 9 cut(s) 144, 186, 276, 339, 464, 581, 659, 688, 716
HapII CCGG 6 cut(s) 141, 183, 254, 273, 303, 380
HgaI GACGC 4 cut(s) 268, 304, 437, 472
HhaI GCGC 1 cut(s) 529
Hin1I GRCGYC 3 cut(s) 155, 429, 483
Hin1II CATG 7 cut(s) 35, 93, 232, 376, 451, 713, 761
Hin6I GCGC 1 cut(s) 527
HinP1I GCGC 1 cut(s) 527
HincII GTYRAC 1 cut(s) 172
HindII GTYRAC 1 cut(s) 172
HinfI GANTC 1 cut(s) 59
HpaII CCGG 6 cut(s) 141, 183, 254, 273, 303, 380
HphI GGTGA 3 cut(s) 286, 671, 801
Hpy166II GTNNAC 3 cut(s) 172, 640, 804
Hpy188I TCNGA 1 cut(s) 736
Hpy188III TCNNGA 2 cut(s) 11, 415
Hpy8I GTNNAC 3 cut(s) 172, 640, 804
Hpy99I CGWCG 2 cut(s) 59, 320
HpyAV CCTTC 2 cut(s) 614, 649
HpyCH4III ACNGT 1 cut(s) 169
HpyCH4IV ACGT 6 cut(s) 17, 102, 155, 334, 596, 636
HpyCH4V TGCA 1 cut(s) 709
HpyF10VI GCNNNNNNNGC 4 cut(s) 312, 665, 674, 722
HpyF3I CTNAG 4 cut(s) 47, 530, 733, 747
HpySE526I ACGT 6 cut(s) 17, 102, 155, 334, 596, 636
Hsp92I GRCGYC 3 cut(s) 155, 429, 483
Hsp92II CATG 7 cut(s) 35, 93, 232, 376, 451, 713, 761
HspAI GCGC 1 cut(s) 527
KflI GGGWCCC 1 cut(s) 358
KroI GCCGGC 1 cut(s) 272
KroNI GCCGGC 1 cut(s) 274
Ksp22I TGATCA 1 cut(s) 691
Kzo9I GATC 5 cut(s) 35, 537, 563, 691, 769
LmnI GCTCC 5 cut(s) 256, 263, 350, 722, 762
Lsp1109I GCAGC 1 cut(s) 712
LweI GCATC 4 cut(s) 60, 316, 598, 727
MaeII ACGT 6 cut(s) 17, 102, 155, 334, 596, 636
MalI GATC 5 cut(s) 37, 539, 565, 693, 771
MbiI CCGCTC 1 cut(s) 251
MboI GATC 5 cut(s) 35, 537, 563, 691, 769
MboII GAAGA 1 cut(s) 644
MflI RGATCY 3 cut(s) 35, 563, 769
MhlI GDGCHC 4 cut(s) 260, 460, 583, 781
MlsI TGGCCA 1 cut(s) 716
MluCI AATT 2 cut(s) 77, 121
MluI ACGCGT 1 cut(s) 313
MluNI TGGCCA 1 cut(s) 716
MlyI GAGTC 1 cut(s) 68
Mox20I TGGCCA 1 cut(s) 716
MroNI GCCGGC 1 cut(s) 272
MscI TGGCCA 1 cut(s) 716
MseI TTAA 1 cut(s) 603
Msp20I TGGCCA 1 cut(s) 716
MspA1I CMGCKG 2 cut(s) 406, 822
MspCI CTTAAG 1 cut(s) 602
MspI CCGG 6 cut(s) 141, 183, 254, 273, 303, 380
MspR9I CCNGG 3 cut(s) 255, 380, 584
MvaI CCWGG 1 cut(s) 584
MvnI CGCG 2 cut(s) 279, 315
MwoI GCNNNNNNNGC 4 cut(s) 312, 665, 674, 722
NaeI GCCGGC 1 cut(s) 274
NciI CCSGG 2 cut(s) 255, 380
NcoI CCATGG 1 cut(s) 31
NdeII GATC 5 cut(s) 35, 537, 563, 691, 769
NgoMIV GCCGGC 1 cut(s) 272
NlaIII CATG 7 cut(s) 35, 93, 232, 376, 451, 713, 761
NlaIV GGNNCC 8 cut(s) 37, 259, 359, 360, 465, 565, 581, 660
NspI RCATGY 1 cut(s) 713
PcsI WCGNNNNNNNCGW 1 cut(s) 276
PdiI GCCGGC 1 cut(s) 274
PkrI GCNGC 3 cut(s) 188, 278, 727
PleI GAGTC 1 cut(s) 67
PmaCI CACGTG 1 cut(s) 597
PmlI CACGTG 1 cut(s) 597
PpsI GAGTC 1 cut(s) 67
Ppu21I YACGTR 1 cut(s) 597
PpuMI RGGWCCY 2 cut(s) 286, 358
PshAI GACNNNNGTC 1 cut(s) 158
Psp5II RGGWCCY 2 cut(s) 286, 358
Psp6I CCWGG 1 cut(s) 582
PspCI CACGTG 1 cut(s) 597
PspFI CCCAGC 2 cut(s) 67, 765
PspGI CCWGG 1 cut(s) 582
PspN4I GGNNCC 8 cut(s) 37, 259, 359, 360, 465, 565, 581, 660
PspOMI GGGCCC 1 cut(s) 579
PspPI GGNCC 6 cut(s) 286, 358, 463, 579, 580, 658
PspPPI RGGWCCY 2 cut(s) 286, 358
PsuI RGATCY 3 cut(s) 35, 563, 769
PvuII CAGCTG 2 cut(s) 406, 822
RsaI GTAC 4 cut(s) 233, 245, 377, 629
RsaNI GTAC 4 cut(s) 232, 244, 376, 628
SaqAI TTAA 1 cut(s) 603
SatI GCNGC 3 cut(s) 187, 277, 726
Sau3AI GATC 5 cut(s) 35, 537, 563, 691, 769
Sau96I GGNCC 6 cut(s) 286, 358, 463, 579, 580, 658
SchI GAGTC 1 cut(s) 68
ScrFI CCNGG 3 cut(s) 255, 380, 584
SduI GDGCHC 4 cut(s) 260, 460, 583, 781
SfaNI GCATC 4 cut(s) 60, 316, 598, 727
SinI GGWCC 2 cut(s) 286, 358
SmlI CTYRAG 3 cut(s) 239, 520, 602
SmoI CTYRAG 3 cut(s) 239, 520, 602
Sse9I AATT 2 cut(s) 77, 121
SsiI CCGC 4 cut(s) 187, 249, 277, 297
StyD4I CCNGG 3 cut(s) 253, 378, 582
StyI CCWWGG 3 cut(s) 31, 683, 741
TaaI ACNGT 1 cut(s) 169
TaiI ACGT 6 cut(s) 20, 105, 158, 337, 599, 639
TaqI TCGA 4 cut(s) 54, 318, 324, 591
TasI AATT 2 cut(s) 77, 121
TauI GCSGC 2 cut(s) 189, 279
Tru1I TTAA 1 cut(s) 603
Tru9I TTAA 1 cut(s) 603
TscAI CASTG 3 cut(s) 152, 465, 511
TseI GCWGC 1 cut(s) 725
TspDTI ATGAA 2 cut(s) 361, 746
TspGWI ACGGA 2 cut(s) 363, 564
TspRI CASTG 3 cut(s) 152, 465, 511
Vha464I CTTAAG 1 cut(s) 602
VpaK11BI GGWCC 2 cut(s) 286, 358
XapI RAATTY 1 cut(s) 77
XceI RCATGY 1 cut(s) 713
ZraI GACGTC 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.