4,5-DOPA dioxygenase extradiol-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G15093 |
| fragaria_vesca | FvH4_1g23880 |
| malus_domestica | MD00G1165300.v1.1 MD15G1340700.v1.1 |
| prunus_persica | Prupe.6G161400_v2.0.a1 |
| pyrus_communis | pycom15g30030 |
| rosa_chinensis | RchiOBHm_Chr2g0119801 RchiOBHm_Chr2g0119841 RchiOBHm_Chr6g0259111 RchiOBHm_Chr6g0259131 |
| rosa_laevigata | RLG00000014556 RLG00000014558 RLG00000018494 RLG00000018495 |
| rosa_multiflora | Rmu_sc0001501.1_g000043 |
| rosa_roxburghii | Rroxscaffold_2G00124060 |
| rosa_rugosa | Rorug02G0223900 Rorug02G0224100 |
| rosa_samantha | Rh2AG281600 Rh2AG281900 Rh2BG293200 Rh2BG293300 Rh2DG288000 Rh2DG288200 Rh2DG307300 Rh6AG102000 Rh6BG094200 Rh6CG091400 |
| rosa_wichuraiana | Rw2G022510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 395 |
| AatII | GACGTC | 1 cut(s) | 158 |
| AccBSI | CCGCTC | 1 cut(s) | 251 |
| AccII | CGCG | 2 cut(s) | 279, 315 |
| AciI | CCGC | 4 cut(s) | 187, 249, 277, 297 |
| AclWI | GGATC | 5 cut(s) | 30, 43, 558, 571, 777 |
| AcoI | YGGCCR | 4 cut(s) | 142, 184, 274, 714 |
| AcsI | RAATTY | 1 cut(s) | 77 |
| AcvI | CACGTG | 1 cut(s) | 597 |
| AcyI | GRCGYC | 3 cut(s) | 155, 429, 483 |
| AfaI | GTAC | 4 cut(s) | 233, 245, 377, 629 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 147, 253, 254, 283, 493, 649 |
| AflII | CTTAAG | 1 cut(s) | 602 |
| AflIII | ACRYGT | 4 cut(s) | 15, 102, 313, 594 |
| AgsI | TTSAA | 1 cut(s) | 620 |
| AjiI | CACGTC | 1 cut(s) | 637 |
| AjnI | CCWGG | 1 cut(s) | 582 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 555, 587 |
| AluBI | AGCT | 6 cut(s) | 238, 406, 725, 751, 765, 822 |
| AluI | AGCT | 6 cut(s) | 238, 406, 725, 751, 765, 822 |
| Alw21I | GWGCWC | 1 cut(s) | 781 |
| Alw26I | GTCTC | 1 cut(s) | 146 |
| AlwI | GGATC | 5 cut(s) | 30, 43, 558, 571, 777 |
| AoxI | GGCC | 9 cut(s) | 142, 184, 274, 337, 462, 579, 657, 686, 714 |
| ApaI | GGGCCC | 1 cut(s) | 583 |
| ApeKI | GCWGC | 1 cut(s) | 725 |
| ApoI | RAATTY | 1 cut(s) | 77 |
| AspLEI | GCGC | 1 cut(s) | 529 |
| AspS9I | GGNCC | 6 cut(s) | 286, 358, 463, 579, 580, 658 |
| AsuC2I | CCSGG | 2 cut(s) | 255, 380 |
| AsuHPI | GGTGA | 3 cut(s) | 286, 671, 801 |
| AvaII | GGWCC | 2 cut(s) | 286, 358 |
| BaeGI | GKGCMC | 2 cut(s) | 460, 583 |
| BalI | TGGCCA | 1 cut(s) | 716 |
| BamHI | GGATCC | 2 cut(s) | 35, 563 |
| BanII | GRGCYC | 2 cut(s) | 260, 583 |
| BbrPI | CACGTG | 1 cut(s) | 597 |
| BbsI | GAAGAC | 1 cut(s) | 639 |
| Bbv12I | GWGCWC | 1 cut(s) | 781 |
| BbvCI | CCTCAGC | 1 cut(s) | 530 |
| BbvI | GCAGC | 1 cut(s) | 712 |
| BccI | CCATC | 2 cut(s) | 185, 206 |
| BceAI | ACGGC | 1 cut(s) | 229 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 308, 342 |
| BciT130I | CCWGG | 1 cut(s) | 584 |
| BciVI | GTATCC | 1 cut(s) | 117 |
| BclI | TGATCA | 1 cut(s) | 691 |
| BcnI | CCSGG | 2 cut(s) | 255, 380 |
| BcoDI | GTCTC | 1 cut(s) | 146 |
| BfoI | RGCGCY | 1 cut(s) | 530 |
| BfrI | CTTAAG | 1 cut(s) | 602 |
| BfuI | GTATCC | 1 cut(s) | 117 |
| BisI | GCNGC | 3 cut(s) | 187, 277, 726 |
| BlpI | GCTNAGC | 2 cut(s) | 47, 747 |
| BlsI | GCNGC | 3 cut(s) | 188, 278, 727 |
| Bme1390I | CCNGG | 3 cut(s) | 255, 380, 584 |
| Bme18I | GGWCC | 2 cut(s) | 286, 358 |
| BmgBI | CACGTC | 1 cut(s) | 637 |
| BmgT120I | GGNCC | 6 cut(s) | 286, 358, 463, 579, 580, 658 |
| BmiI | GGNNCC | 8 cut(s) | 37, 259, 359, 360, 465, 565, 581, 660 |
| BmrFI | CCNGG | 3 cut(s) | 255, 380, 584 |
| BmrI | ACTGGG | 1 cut(s) | 157 |
| BmsI | GCATC | 4 cut(s) | 60, 316, 598, 727 |
| BmuI | ACTGGG | 1 cut(s) | 157 |
| BoxI | GACNNNNGTC | 1 cut(s) | 158 |
| BpiI | GAAGAC | 1 cut(s) | 639 |
| BpmI | CTGGAG | 2 cut(s) | 68, 605 |
| Bpu10I | CCTNAGC | 1 cut(s) | 530 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 47, 747 |
| BpuEI | CTTGAG | 2 cut(s) | 224, 541 |
| BpuMI | CCSGG | 2 cut(s) | 255, 380 |
| BsaAI | YACGTR | 1 cut(s) | 597 |
| BsaHI | GRCGYC | 3 cut(s) | 155, 429, 483 |
| BsaJI | CCNNGG | 7 cut(s) | 31, 346, 575, 582, 683, 717, 741 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 164, 194, 342, 372 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 147, 253, 254, 283, 493, 649 |
| Bse118I | RCCGGY | 1 cut(s) | 272 |
| Bse1I | ACTGG | 5 cut(s) | 85, 152, 465, 643, 799 |
| Bse3DI | GCAATG | 1 cut(s) | 704 |
| BseBI | CCWGG | 1 cut(s) | 584 |
| BseDI | CCNNGG | 7 cut(s) | 31, 346, 575, 582, 683, 717, 741 |
| BseGI | GGATG | 2 cut(s) | 390, 613 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 147, 253, 254, 283, 493, 649 |
| BseMI | GCAATG | 1 cut(s) | 704 |
| BseMII | CTCAG | 3 cut(s) | 38, 521, 747 |
| BseNI | ACTGG | 5 cut(s) | 85, 152, 465, 643, 799 |
| BseRI | GAGGAG | 1 cut(s) | 665 |
| BseSI | GKGCMC | 2 cut(s) | 460, 583 |
| BseX3I | CGGCCG | 2 cut(s) | 184, 274 |
| BseXI | GCAGC | 1 cut(s) | 712 |
| BseYI | CCCAGC | 2 cut(s) | 67, 765 |
| Bsh1236I | CGCG | 2 cut(s) | 279, 315 |
| Bsh1285I | CGRYCG | 2 cut(s) | 187, 277 |
| BshFI | GGCC | 9 cut(s) | 144, 186, 276, 339, 464, 581, 659, 688, 716 |
| BsiEI | CGRYCG | 2 cut(s) | 187, 277 |
| BsiHKAI | GWGCWC | 1 cut(s) | 781 |
| BsiSI | CCGG | 6 cut(s) | 141, 183, 254, 273, 303, 380 |
| BslFI | GGGAC | 3 cut(s) | 146, 344, 440 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 147, 253, 254, 283, 493, 649 |
| BsmAI | GTCTC | 1 cut(s) | 146 |
| BsmBI | CGTCTC | 1 cut(s) | 146 |
| BsmFI | GGGAC | 3 cut(s) | 146, 344, 440 |
| BsnI | GGCC | 9 cut(s) | 144, 186, 276, 339, 464, 581, 659, 688, 716 |
| Bsp120I | GGGCCC | 1 cut(s) | 579 |
| Bsp1286I | GDGCHC | 4 cut(s) | 260, 460, 583, 781 |
| Bsp143I | GATC | 5 cut(s) | 35, 537, 563, 691, 769 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 47, 747 |
| Bsp19I | CCATGG | 1 cut(s) | 31 |
| BspACI | CCGC | 4 cut(s) | 187, 249, 277, 297 |
| BspANI | GGCC | 9 cut(s) | 144, 186, 276, 339, 464, 581, 659, 688, 716 |
| BspCNI | CTCAG | 3 cut(s) | 39, 522, 746 |
| BspFNI | CGCG | 2 cut(s) | 279, 315 |
| BspLI | GGNNCC | 8 cut(s) | 37, 259, 359, 360, 465, 565, 581, 660 |
| BspPI | GGATC | 5 cut(s) | 30, 43, 558, 571, 777 |
| BspTI | CTTAAG | 1 cut(s) | 602 |
| BsrBI | CCGCTC | 1 cut(s) | 251 |
| BsrDI | GCAATG | 1 cut(s) | 704 |
| BsrFI | RCCGGY | 1 cut(s) | 272 |
| BsrI | ACTGG | 5 cut(s) | 85, 152, 465, 643, 799 |
| BssAI | RCCGGY | 1 cut(s) | 272 |
| BssECI | CCNNGG | 7 cut(s) | 31, 346, 575, 582, 683, 717, 741 |
| BssMI | GATC | 5 cut(s) | 35, 537, 563, 691, 769 |
| BssNI | GRCGYC | 3 cut(s) | 155, 429, 483 |
| BssT1I | CCWWGG | 3 cut(s) | 31, 683, 741 |
| Bst2UI | CCWGG | 1 cut(s) | 584 |
| Bst4CI | ACNGT | 1 cut(s) | 169 |
| BstACI | GRCGYC | 3 cut(s) | 155, 429, 483 |
| BstAFI | CTTAAG | 1 cut(s) | 602 |
| BstBAI | YACGTR | 1 cut(s) | 597 |
| BstC8I | GCNNGC | 2 cut(s) | 274, 730 |
| BstDEI | CTNAG | 4 cut(s) | 47, 530, 733, 747 |
| BstDSI | CCRYGG | 4 cut(s) | 31, 346, 575, 717 |
| BstF5I | GGATG | 2 cut(s) | 390, 613 |
| BstFNI | CGCG | 2 cut(s) | 279, 315 |
| BstH2I | RGCGCY | 1 cut(s) | 530 |
| BstHHI | GCGC | 1 cut(s) | 529 |
| BstKTI | GATC | 5 cut(s) | 38, 540, 566, 694, 772 |
| BstMAI | GTCTC | 1 cut(s) | 146 |
| BstMBI | GATC | 5 cut(s) | 35, 537, 563, 691, 769 |
| BstMCI | CGRYCG | 2 cut(s) | 187, 277 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 312, 665, 674, 722 |
| BstNI | CCWGG | 1 cut(s) | 584 |
| BstNSI | RCATGY | 1 cut(s) | 713 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 158 |
| BstSCI | CCNGG | 3 cut(s) | 253, 378, 582 |
| BstSLI | GKGCMC | 2 cut(s) | 460, 583 |
| BstUI | CGCG | 2 cut(s) | 279, 315 |
| BstV1I | GCAGC | 1 cut(s) | 712 |
| BstV2I | GAAGAC | 1 cut(s) | 639 |
| BstX2I | RGATCY | 3 cut(s) | 35, 563, 769 |
| BstYI | RGATCY | 3 cut(s) | 35, 563, 769 |
| BstZI | CGGCCG | 2 cut(s) | 184, 274 |
| BsuI | GTATCC | 1 cut(s) | 117 |
| BsuRI | GGCC | 9 cut(s) | 144, 186, 276, 339, 464, 581, 659, 688, 716 |
| BtgI | CCRYGG | 4 cut(s) | 31, 346, 575, 717 |
| BtrI | CACGTC | 1 cut(s) | 637 |
| BtsCI | GGATG | 2 cut(s) | 390, 613 |
| BtsI | GCAGTG | 1 cut(s) | 511 |
| BtsIMutI | CAGTG | 3 cut(s) | 145, 458, 511 |
| Cac8I | GCNNGC | 2 cut(s) | 274, 730 |
| CfoI | GCGC | 1 cut(s) | 529 |
| Cfr10I | RCCGGY | 1 cut(s) | 272 |
| Cfr13I | GGNCC | 6 cut(s) | 286, 358, 463, 579, 580, 658 |
| CseI | GACGC | 4 cut(s) | 268, 304, 437, 472 |
| Csp6I | GTAC | 4 cut(s) | 232, 244, 376, 628 |
| CviAII | CATG | 7 cut(s) | 32, 90, 229, 373, 448, 710, 758 |
| CviQI | GTAC | 4 cut(s) | 232, 244, 376, 628 |
| DdeI | CTNAG | 4 cut(s) | 47, 530, 733, 747 |
| DpnI | GATC | 5 cut(s) | 37, 539, 565, 693, 771 |
| DpnII | GATC | 5 cut(s) | 35, 537, 563, 691, 769 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 395 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 395 |
| EaeI | YGGCCR | 4 cut(s) | 142, 184, 274, 714 |
| EagI | CGGCCG | 2 cut(s) | 184, 274 |
| EclXI | CGGCCG | 2 cut(s) | 184, 274 |
| Eco130I | CCWWGG | 3 cut(s) | 31, 683, 741 |
| Eco24I | GRGCYC | 2 cut(s) | 260, 583 |
| Eco47I | GGWCC | 2 cut(s) | 286, 358 |
| Eco52I | CGGCCG | 2 cut(s) | 184, 274 |
| Eco72I | CACGTG | 1 cut(s) | 597 |
| EcoO109I | RGGNCCY | 4 cut(s) | 286, 358, 580, 658 |
| EcoRII | CCWGG | 1 cut(s) | 582 |
| EcoT14I | CCWWGG | 3 cut(s) | 31, 683, 741 |
| EcoT38I | GRGCYC | 2 cut(s) | 260, 583 |
| ErhI | CCWWGG | 3 cut(s) | 31, 683, 741 |
| Esp3I | CGTCTC | 1 cut(s) | 146 |
| FaeI | CATG | 7 cut(s) | 35, 93, 232, 376, 451, 713, 761 |
| FaqI | GGGAC | 3 cut(s) | 146, 344, 440 |
| FatI | CATG | 7 cut(s) | 31, 89, 228, 372, 447, 709, 757 |
| FauI | CCCGC | 1 cut(s) | 256 |
| FbaI | TGATCA | 1 cut(s) | 691 |
| Fnu4HI | GCNGC | 3 cut(s) | 187, 277, 726 |
| FokI | GGATG | 2 cut(s) | 377, 620 |
| FriOI | GRGCYC | 2 cut(s) | 260, 583 |
| Fsp4HI | GCNGC | 3 cut(s) | 187, 277, 726 |
| GlaI | GCGC | 1 cut(s) | 528 |
| GluI | GCNGC | 3 cut(s) | 187, 277, 726 |
| GsaI | CCCAGC | 2 cut(s) | 71, 769 |
| GsuI | CTGGAG | 2 cut(s) | 68, 605 |
| HaeII | RGCGCY | 1 cut(s) | 530 |
| HaeIII | GGCC | 9 cut(s) | 144, 186, 276, 339, 464, 581, 659, 688, 716 |
| HapII | CCGG | 6 cut(s) | 141, 183, 254, 273, 303, 380 |
| HgaI | GACGC | 4 cut(s) | 268, 304, 437, 472 |
| HhaI | GCGC | 1 cut(s) | 529 |
| Hin1I | GRCGYC | 3 cut(s) | 155, 429, 483 |
| Hin1II | CATG | 7 cut(s) | 35, 93, 232, 376, 451, 713, 761 |
| Hin6I | GCGC | 1 cut(s) | 527 |
| HinP1I | GCGC | 1 cut(s) | 527 |
| HincII | GTYRAC | 1 cut(s) | 172 |
| HindII | GTYRAC | 1 cut(s) | 172 |
| HinfI | GANTC | 1 cut(s) | 59 |
| HpaII | CCGG | 6 cut(s) | 141, 183, 254, 273, 303, 380 |
| HphI | GGTGA | 3 cut(s) | 286, 671, 801 |
| Hpy166II | GTNNAC | 3 cut(s) | 172, 640, 804 |
| Hpy188I | TCNGA | 1 cut(s) | 736 |
| Hpy188III | TCNNGA | 2 cut(s) | 11, 415 |
| Hpy8I | GTNNAC | 3 cut(s) | 172, 640, 804 |
| Hpy99I | CGWCG | 2 cut(s) | 59, 320 |
| HpyAV | CCTTC | 2 cut(s) | 614, 649 |
| HpyCH4III | ACNGT | 1 cut(s) | 169 |
| HpyCH4IV | ACGT | 6 cut(s) | 17, 102, 155, 334, 596, 636 |
| HpyCH4V | TGCA | 1 cut(s) | 709 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 312, 665, 674, 722 |
| HpyF3I | CTNAG | 4 cut(s) | 47, 530, 733, 747 |
| HpySE526I | ACGT | 6 cut(s) | 17, 102, 155, 334, 596, 636 |
| Hsp92I | GRCGYC | 3 cut(s) | 155, 429, 483 |
| Hsp92II | CATG | 7 cut(s) | 35, 93, 232, 376, 451, 713, 761 |
| HspAI | GCGC | 1 cut(s) | 527 |
| KflI | GGGWCCC | 1 cut(s) | 358 |
| KroI | GCCGGC | 1 cut(s) | 272 |
| KroNI | GCCGGC | 1 cut(s) | 274 |
| Ksp22I | TGATCA | 1 cut(s) | 691 |
| Kzo9I | GATC | 5 cut(s) | 35, 537, 563, 691, 769 |
| LmnI | GCTCC | 5 cut(s) | 256, 263, 350, 722, 762 |
| Lsp1109I | GCAGC | 1 cut(s) | 712 |
| LweI | GCATC | 4 cut(s) | 60, 316, 598, 727 |
| MaeII | ACGT | 6 cut(s) | 17, 102, 155, 334, 596, 636 |
| MalI | GATC | 5 cut(s) | 37, 539, 565, 693, 771 |
| MbiI | CCGCTC | 1 cut(s) | 251 |
| MboI | GATC | 5 cut(s) | 35, 537, 563, 691, 769 |
| MboII | GAAGA | 1 cut(s) | 644 |
| MflI | RGATCY | 3 cut(s) | 35, 563, 769 |
| MhlI | GDGCHC | 4 cut(s) | 260, 460, 583, 781 |
| MlsI | TGGCCA | 1 cut(s) | 716 |
| MluCI | AATT | 2 cut(s) | 77, 121 |
| MluI | ACGCGT | 1 cut(s) | 313 |
| MluNI | TGGCCA | 1 cut(s) | 716 |
| MlyI | GAGTC | 1 cut(s) | 68 |
| Mox20I | TGGCCA | 1 cut(s) | 716 |
| MroNI | GCCGGC | 1 cut(s) | 272 |
| MscI | TGGCCA | 1 cut(s) | 716 |
| MseI | TTAA | 1 cut(s) | 603 |
| Msp20I | TGGCCA | 1 cut(s) | 716 |
| MspA1I | CMGCKG | 2 cut(s) | 406, 822 |
| MspCI | CTTAAG | 1 cut(s) | 602 |
| MspI | CCGG | 6 cut(s) | 141, 183, 254, 273, 303, 380 |
| MspR9I | CCNGG | 3 cut(s) | 255, 380, 584 |
| MvaI | CCWGG | 1 cut(s) | 584 |
| MvnI | CGCG | 2 cut(s) | 279, 315 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 312, 665, 674, 722 |
| NaeI | GCCGGC | 1 cut(s) | 274 |
| NciI | CCSGG | 2 cut(s) | 255, 380 |
| NcoI | CCATGG | 1 cut(s) | 31 |
| NdeII | GATC | 5 cut(s) | 35, 537, 563, 691, 769 |
| NgoMIV | GCCGGC | 1 cut(s) | 272 |
| NlaIII | CATG | 7 cut(s) | 35, 93, 232, 376, 451, 713, 761 |
| NlaIV | GGNNCC | 8 cut(s) | 37, 259, 359, 360, 465, 565, 581, 660 |
| NspI | RCATGY | 1 cut(s) | 713 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 276 |
| PdiI | GCCGGC | 1 cut(s) | 274 |
| PkrI | GCNGC | 3 cut(s) | 188, 278, 727 |
| PleI | GAGTC | 1 cut(s) | 67 |
| PmaCI | CACGTG | 1 cut(s) | 597 |
| PmlI | CACGTG | 1 cut(s) | 597 |
| PpsI | GAGTC | 1 cut(s) | 67 |
| Ppu21I | YACGTR | 1 cut(s) | 597 |
| PpuMI | RGGWCCY | 2 cut(s) | 286, 358 |
| PshAI | GACNNNNGTC | 1 cut(s) | 158 |
| Psp5II | RGGWCCY | 2 cut(s) | 286, 358 |
| Psp6I | CCWGG | 1 cut(s) | 582 |
| PspCI | CACGTG | 1 cut(s) | 597 |
| PspFI | CCCAGC | 2 cut(s) | 67, 765 |
| PspGI | CCWGG | 1 cut(s) | 582 |
| PspN4I | GGNNCC | 8 cut(s) | 37, 259, 359, 360, 465, 565, 581, 660 |
| PspOMI | GGGCCC | 1 cut(s) | 579 |
| PspPI | GGNCC | 6 cut(s) | 286, 358, 463, 579, 580, 658 |
| PspPPI | RGGWCCY | 2 cut(s) | 286, 358 |
| PsuI | RGATCY | 3 cut(s) | 35, 563, 769 |
| PvuII | CAGCTG | 2 cut(s) | 406, 822 |
| RsaI | GTAC | 4 cut(s) | 233, 245, 377, 629 |
| RsaNI | GTAC | 4 cut(s) | 232, 244, 376, 628 |
| SaqAI | TTAA | 1 cut(s) | 603 |
| SatI | GCNGC | 3 cut(s) | 187, 277, 726 |
| Sau3AI | GATC | 5 cut(s) | 35, 537, 563, 691, 769 |
| Sau96I | GGNCC | 6 cut(s) | 286, 358, 463, 579, 580, 658 |
| SchI | GAGTC | 1 cut(s) | 68 |
| ScrFI | CCNGG | 3 cut(s) | 255, 380, 584 |
| SduI | GDGCHC | 4 cut(s) | 260, 460, 583, 781 |
| SfaNI | GCATC | 4 cut(s) | 60, 316, 598, 727 |
| SinI | GGWCC | 2 cut(s) | 286, 358 |
| SmlI | CTYRAG | 3 cut(s) | 239, 520, 602 |
| SmoI | CTYRAG | 3 cut(s) | 239, 520, 602 |
| Sse9I | AATT | 2 cut(s) | 77, 121 |
| SsiI | CCGC | 4 cut(s) | 187, 249, 277, 297 |
| StyD4I | CCNGG | 3 cut(s) | 253, 378, 582 |
| StyI | CCWWGG | 3 cut(s) | 31, 683, 741 |
| TaaI | ACNGT | 1 cut(s) | 169 |
| TaiI | ACGT | 6 cut(s) | 20, 105, 158, 337, 599, 639 |
| TaqI | TCGA | 4 cut(s) | 54, 318, 324, 591 |
| TasI | AATT | 2 cut(s) | 77, 121 |
| TauI | GCSGC | 2 cut(s) | 189, 279 |
| Tru1I | TTAA | 1 cut(s) | 603 |
| Tru9I | TTAA | 1 cut(s) | 603 |
| TscAI | CASTG | 3 cut(s) | 152, 465, 511 |
| TseI | GCWGC | 1 cut(s) | 725 |
| TspDTI | ATGAA | 2 cut(s) | 361, 746 |
| TspGWI | ACGGA | 2 cut(s) | 363, 564 |
| TspRI | CASTG | 3 cut(s) | 152, 465, 511 |
| Vha464I | CTTAAG | 1 cut(s) | 602 |
| VpaK11BI | GGWCC | 2 cut(s) | 286, 358 |
| XapI | RAATTY | 1 cut(s) | 77 |
| XceI | RCATGY | 1 cut(s) | 713 |
| ZraI | GACGTC | 1 cut(s) | 156 |