Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0003519

Physical Location & Seq

Genomic Coordinates Forward (+)

22902266 .. 22905607

Gene Structure 3342 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G224100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1065 bp

ATGGAGCTTCTTCCTGATTTTTTATTTACAGTTGTTTTTTCTCTCTTGATGGCTTTTTGGCTTTCTTTCGTTCTCCCTCTGGTTCTTTCTATGTGTCCAAGCAGGGATGCCAATGACCATGTGGGGAAAAGAAGGGTTCTTTATGAGTGTGAATCTCCGGTTGAACCCGAAATTCATGACTGGAGAAGTGAGATACGAGGTGGGTTTGTTGAAAAAGTTGTGAAAGTTGAGGAATTTATAGGTGAAGAACCAAAAGAGGAAAGTTTTCTACTTCAAGATTTTGTTGATGAAAGTTGTGGATCGCCGAAGGGACATGAGGGTTCAAAGACTGATGAATATGAAGTTTGCGGAGAAGTTCGAGTTGTTTGTTTGTCAGAGAAGAGTGTTGAAGATGAGAGTTCTGGTGGGCATGGTGGTCTATGCGGGTGCTCAGAGAACATGGTTGATCAAAGTTCTGAGAGGCATGAATTTGGAGAAATTGAGGTAGATTTGACAAAAAACGAAGTGGGAATCTTTGAAAGTGAAGATATCAAATTTCCAGAGTGTGATGGCAGTGATCATGAAGCTGATCGAGCCAGAGAGAGTGTAGTAGATGGTGTGGAAAAGGAGGGGTTGCTTGGTGAGGAGGATGATTGGGAGGGAATAGAAAGAACTGAATTGGAGAGGCTTTTTGGTGCTGCAGTGGTGTTTGTTGGGTCTAAGAGTAATGCTGAGAGAAGTTTATGTGTTGGAAGTGATGTGAAGACGAGGTTAGATGGGCTTCACAAGATTGCCACTCGAGGGCCTTGCTTTGAACCCCAACCTATGGCATTCAAGGTCTCTGCACGAGCAAAATGGAATGCTTGGCAACAACTCGGAAACATGAGTGCAGAGGTAGCGATGGAGCAGTATATCACACTTCTTTCAGAAAGAGTTCCTGGGTGGATGCAAGATGTTCACGGTGATGCCCAAGCGTATGAGAAGATAGCTTCTGATCTGAAGACATTGGTGCAAAACCAATCAGAACCTGCAGGGGAAAGAAAAGTGGAAGAACTAAAGCCTGATTTTAAAGGTTTAGATAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000062 GO:0000166 GO:0003674 GO:0005488 GO:0005575 GO:0005576 GO:0005615 GO:0017076 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033218 GO:0036094 GO:0043167 GO:0043168 GO:0044421 GO:0048037 GO:0050662 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901567 GO:1901681

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ACBP

Protein Analysis

355

Amino Acids

39.57

Weight (kDa)

4.52

Isoelectric Point (pI)

48.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003519)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24230 AT4G24230 AT4G24230 AT4G24230 AT4G24230 AT4G24230
fragaria_vesca	FvH4_1g17230 FvH4_1g17230 FvH4_1g17230 FvH4_1g17230 FvH4_1g17230 FvH4_1g17230 FvH4_1g17230
prunus_persica	Prupe.6G224100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0107421 RchiOBHm_Chr7g0232431
rosa_laevigata	RLG00000017578 RLG00000023925 RLG00000032300 RLG00000032902
rosa_multiflora	Rmu_sc0003510.1_g000004 Rmu_sc0023231.1_g000001 Rmu_sc0025013.1_g000005 Rmu_ssc0000264.1_g000031
rosa_roxburghii	Rroxscaffold_2G00136360
rosa_rugosa	Rorug02G0143200 Rorug02G0143300 Rorug02G0143400
rosa_samantha	Rh1DG014600 Rh2AG193500 Rh2AG223500 Rh2BG205800 Rh2CG198800 Rh2DG200700
rosa_wichuraiana	Rw2G015330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1015
AccB7I	CCANNNNNTGG	1 cut(s)	805
AciI	CCGC	2 cut(s)	348, 423
AclWI	GGATC	1 cut(s)	307
AcsI	RAATTY	4 cut(s)	171, 233, 467, 533
AcuI	CTGAAG	1 cut(s)	998
AfiI	CCNNNNNNNGG	2 cut(s)	780, 805
AgsI	TTSAA	8 cut(s)	164, 212, 275, 324, 389, 518, 794, 814
AjnI	CCWGG	1 cut(s)	916
AluBI	AGCT	3 cut(s)	7, 566, 968
AluI	AGCT	3 cut(s)	7, 566, 968
Alw21I	GWGCWC	1 cut(s)	431
Alw26I	GTCTC	1 cut(s)	823
AlwI	GGATC	1 cut(s)	307
AlwNI	CAGNNNCTG	1 cut(s)	1007
Ama87I	CYCGRG	1 cut(s)	777
AoxI	GGCC	1 cut(s)	782
ApeKI	GCWGC	1 cut(s)	677
ApoI	RAATTY	4 cut(s)	171, 233, 467, 533
Asp700I	GAANNNNTTC	2 cut(s)	264, 912
AspS9I	GGNCC	1 cut(s)	782
AsuHPI	GGTGA	3 cut(s)	254, 632, 953
AvaI	CYCGRG	1 cut(s)	777
BauI	CACGAG	1 cut(s)	825
BbsI	GAAGAC	2 cut(s)	749, 986
Bbv12I	GWGCWC	1 cut(s)	431
BbvI	GCAGC	1 cut(s)	664
BccI	CCATC	5 cut(s)	43, 542, 587, 749, 874
BcgI	CGANNNNNNTGC	2 cut(s)	768, 802
BciT130I	CCWGG	1 cut(s)	918
BclI	TGATCA	2 cut(s)	445, 556
BcoDI	GTCTC	1 cut(s)	823
BfmI	CTRYAG	2 cut(s)	678, 1008
BfuAI	ACCTGC	1 cut(s)	1015
BisI	GCNGC	1 cut(s)	678
BlsI	GCNGC	1 cut(s)	679
Bme1390I	CCNGG	1 cut(s)	918
BmeT110I	CYCGRG	1 cut(s)	777
BmgT120I	GGNCC	1 cut(s)	782
BmrFI	CCNGG	1 cut(s)	918
BmsI	GCATC	3 cut(s)	97, 915, 934
BpiI	GAAGAC	2 cut(s)	749, 986
BpmI	CTGGAG	1 cut(s)	202
BsaI	GGTCTC	1 cut(s)	823
BsaJI	CCNNGG	1 cut(s)	917
BsaWI	WCCGGW	1 cut(s)	157
Bsc4I	CCNNNNNNNGG	2 cut(s)	780, 805
Bse1I	ACTGG	1 cut(s)	185
BseBI	CCWGG	1 cut(s)	918
BseDI	CCNNGG	1 cut(s)	917
BseGI	GGATG	3 cut(s)	112, 634, 930
BseLI	CCNNNNNNNGG	2 cut(s)	780, 805
BseMII	CTCAG	3 cut(s)	444, 447, 702
BseNI	ACTGG	1 cut(s)	185
BseRI	GAGGAG	1 cut(s)	638
BseXI	GCAGC	1 cut(s)	664
BsgI	GTGCAG	2 cut(s)	807, 888
BshFI	GGCC	1 cut(s)	784
BsiHKAI	GWGCWC	1 cut(s)	431
BsiHKCI	CYCGRG	1 cut(s)	777
BsiSI	CCGG	1 cut(s)	158
BslFI	GGGAC	1 cut(s)	324
BslI	CCNNNNNNNGG	2 cut(s)	780, 805
BsmAI	GTCTC	1 cut(s)	823
BsmFI	GGGAC	1 cut(s)	324
BsmI	GAATGC	2 cut(s)	809, 844
BsnI	GGCC	1 cut(s)	784
Bso31I	GGTCTC	1 cut(s)	823
BsoBI	CYCGRG	1 cut(s)	777
Bsp1286I	GDGCHC	1 cut(s)	431
Bsp143I	GATC	5 cut(s)	299, 445, 556, 568, 973
BspACI	CCGC	2 cut(s)	348, 423
BspANI	GGCC	1 cut(s)	784
BspCNI	CTCAG	3 cut(s)	443, 448, 703
BspHI	TCATGA	2 cut(s)	175, 559
BspMAI	CTGCAG	2 cut(s)	682, 1012
BspMI	ACCTGC	1 cut(s)	1015
BspPI	GGATC	1 cut(s)	307
BspTNI	GGTCTC	1 cut(s)	823
BsrI	ACTGG	1 cut(s)	185
BssECI	CCNNGG	1 cut(s)	917
BssMI	GATC	5 cut(s)	299, 445, 556, 568, 973
BssSI	CACGAG	1 cut(s)	825
Bst2BI	CACGAG	1 cut(s)	825
Bst2UI	CCWGG	1 cut(s)	918
Bst4CI	ACNGT	2 cut(s)	31, 941
Bst6I	CTCTTC	1 cut(s)	374
BstDEI	CTNAG	4 cut(s)	430, 456, 699, 711
BstF5I	GGATG	3 cut(s)	112, 634, 930
BstKTI	GATC	5 cut(s)	302, 448, 559, 571, 976
BstMAI	GTCTC	1 cut(s)	823
BstMBI	GATC	5 cut(s)	299, 445, 556, 568, 973
BstMWI	GCNNNNNNNGC	2 cut(s)	572, 875
BstNI	CCWGG	1 cut(s)	918
BstSCI	CCNGG	1 cut(s)	916
BstSFI	CTRYAG	2 cut(s)	678, 1008
BstV1I	GCAGC	1 cut(s)	664
BstV2I	GAAGAC	2 cut(s)	749, 986
BsuRI	GGCC	1 cut(s)	784
BtgZI	GCGATG	1 cut(s)	893
BtsCI	GGATG	3 cut(s)	112, 634, 930
BtsI	GCAGTG	2 cut(s)	559, 687
BtsIMutI	CAGTG	2 cut(s)	559, 687
BveI	ACCTGC	1 cut(s)	1015
CaiI	CAGNNNCTG	1 cut(s)	1007
CciI	TCATGA	2 cut(s)	175, 559
Cfr13I	GGNCC	1 cut(s)	782
CviAII	CATG	8 cut(s)	119, 176, 314, 410, 439, 464, 560, 862
DdeI	CTNAG	4 cut(s)	430, 456, 699, 711
DpnI	GATC	5 cut(s)	301, 447, 558, 570, 975
DpnII	GATC	5 cut(s)	299, 445, 556, 568, 973
DraI	TTTAAA	1 cut(s)	1048
Eam1104I	CTCTTC	1 cut(s)	374
EarI	CTCTTC	1 cut(s)	374
Eco31I	GGTCTC	1 cut(s)	823
Eco32I	GATATC	1 cut(s)	529
Eco57I	CTGAAG	1 cut(s)	998
Eco88I	CYCGRG	1 cut(s)	777
EcoO109I	RGGNCCY	1 cut(s)	782
EcoRII	CCWGG	1 cut(s)	916
EcoRV	GATATC	1 cut(s)	529
FaeI	CATG	8 cut(s)	122, 179, 317, 413, 442, 467, 563, 865
FaqI	GGGAC	1 cut(s)	324
FatI	CATG	8 cut(s)	118, 175, 313, 409, 438, 463, 559, 861
FauI	CCCGC	1 cut(s)	416
FbaI	TGATCA	2 cut(s)	445, 556
Fnu4HI	GCNGC	1 cut(s)	678
FokI	GGATG	3 cut(s)	119, 641, 937
Fsp4HI	GCNGC	1 cut(s)	678
GluI	GCNGC	1 cut(s)	678
GsuI	CTGGAG	1 cut(s)	202
HaeIII	GGCC	1 cut(s)	784
HapII	CCGG	1 cut(s)	158
Hin1II	CATG	8 cut(s)	122, 179, 317, 413, 442, 467, 563, 865
HinfI	GANTC	2 cut(s)	152, 510
HpaII	CCGG	1 cut(s)	158
HphI	GGTGA	3 cut(s)	254, 632, 953
Hpy166II	GTNNAC	1 cut(s)	937
Hpy188I	TCNGA	8 cut(s)	376, 433, 457, 857, 907, 973, 978, 1003
Hpy188III	TCNNGA	6 cut(s)	14, 46, 176, 275, 539, 560
Hpy8I	GTNNAC	1 cut(s)	937
HpyAV	CCTTC	2 cut(s)	126, 301
HpyCH4III	ACNGT	2 cut(s)	31, 941
HpyCH4V	TGCA	6 cut(s)	680, 824, 869, 928, 991, 1010
HpyF10VI	GCNNNNNNNGC	2 cut(s)	572, 875
HpyF3I	CTNAG	4 cut(s)	430, 456, 699, 711
Hsp92II	CATG	8 cut(s)	122, 179, 317, 413, 442, 467, 563, 865
Ksp22I	TGATCA	2 cut(s)	445, 556
Kzo9I	GATC	5 cut(s)	299, 445, 556, 568, 973
LmnI	GCTCC	2 cut(s)	4, 883
Lsp1109I	GCAGC	1 cut(s)	664
LweI	GCATC	3 cut(s)	97, 915, 934
MalI	GATC	5 cut(s)	301, 447, 558, 570, 975
MboI	GATC	5 cut(s)	299, 445, 556, 568, 973
MboII	GAAGA	8 cut(s)	257, 391, 401, 536, 754, 973, 991, 1040
MhlI	GDGCHC	1 cut(s)	431
MluCI	AATT	7 cut(s)	171, 233, 467, 477, 533, 656, 1060
MmeI	TCCRAC	1 cut(s)	709
MroXI	GAANNNNTTC	2 cut(s)	264, 912
MseI	TTAA	1 cut(s)	1047
MslI	CAYNNNNRTG	1 cut(s)	942
MspI	CCGG	1 cut(s)	158
MspR9I	CCNGG	1 cut(s)	918
Mva1269I	GAATGC	2 cut(s)	809, 844
MvaI	CCWGG	1 cut(s)	918
MwoI	GCNNNNNNNGC	2 cut(s)	572, 875
NdeII	GATC	5 cut(s)	299, 445, 556, 568, 973
NlaIII	CATG	8 cut(s)	122, 179, 317, 413, 442, 467, 563, 865
PaeR7I	CTCGAG	1 cut(s)	777
PagI	TCATGA	2 cut(s)	175, 559
PctI	GAATGC	2 cut(s)	809, 844
PdmI	GAANNNNTTC	2 cut(s)	264, 912
PfeI	GAWTC	2 cut(s)	152, 510
PflMI	CCANNNNNTGG	1 cut(s)	805
PkrI	GCNGC	1 cut(s)	679
Psp6I	CCWGG	1 cut(s)	916
PspGI	CCWGG	1 cut(s)	916
PspPI	GGNCC	1 cut(s)	782
PspXI	VCTCGAGB	1 cut(s)	777
PstI	CTGCAG	2 cut(s)	682, 1012
PstNI	CAGNNNCTG	1 cut(s)	1007
RseI	CAYNNNNRTG	1 cut(s)	942
SaqAI	TTAA	1 cut(s)	1047
SatI	GCNGC	1 cut(s)	678
Sau3AI	GATC	5 cut(s)	299, 445, 556, 568, 973
Sau96I	GGNCC	1 cut(s)	782
SbfI	CCTGCAGG	1 cut(s)	1012
ScrFI	CCNGG	1 cut(s)	918
SdaI	CCTGCAGG	1 cut(s)	1012
SduI	GDGCHC	1 cut(s)	431
SfaNI	GCATC	3 cut(s)	97, 915, 934
SfcI	CTRYAG	2 cut(s)	678, 1008
Sfr274I	CTCGAG	1 cut(s)	777
SlaI	CTCGAG	1 cut(s)	777
SmiMI	CAYNNNNRTG	1 cut(s)	942
SmlI	CTYRAG	1 cut(s)	777
SmoI	CTYRAG	1 cut(s)	777
Sse8387I	CCTGCAGG	1 cut(s)	1012
Sse9I	AATT	7 cut(s)	171, 233, 467, 477, 533, 656, 1060
SsiI	CCGC	2 cut(s)	348, 423
StyD4I	CCNGG	1 cut(s)	916
TaaI	ACNGT	2 cut(s)	31, 941
TaqI	TCGA	3 cut(s)	358, 571, 778
TasI	AATT	7 cut(s)	171, 233, 467, 477, 533, 656, 1060
TfiI	GAWTC	2 cut(s)	152, 510
Tru1I	TTAA	1 cut(s)	1047
Tru9I	TTAA	1 cut(s)	1047
TscAI	CASTG	2 cut(s)	559, 687
TseI	GCWGC	1 cut(s)	677
TspDTI	ATGAA	6 cut(s)	164, 303, 348, 354, 480, 576
TspRI	CASTG	2 cut(s)	559, 687
Van91I	CCANNNNNTGG	1 cut(s)	805
XapI	RAATTY	4 cut(s)	171, 233, 467, 533
XcmI	CCANNNNNNNNNTGG	1 cut(s)	118
XhoI	CTCGAG	1 cut(s)	777
XmnI	GAANNNNTTC	2 cut(s)	264, 912

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.