Prupe.6G307900_v2.0.a1

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
27731474 .. 27733076
1603 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G307900.1

Sequence Viewer

Length: 1113 bp
ATGGTGTATGTGCAGGGTCTGGGTTGGGCTGATCAGTCAGTGGGTCTGATATTAACACTCTCCGGAGCGGTGCTCTTGATCATTCTCTCATCCTCAGTCGATGGCCAACTTTGTTCAACGAGGCCCGTCCACATCTTCAACTTTGGCGACTCCAACTCGGACACGGGTGGACTCGCCGCCGGACTAGGCTACTCCGTCAATCCCCCCAACGGCCGTACCTTCTTCGGCAGCTCCACCGGTCGCCTCTCCGATGGACGCCTCGTCATCGACCTCCTCTGCCAGAGTCTGAATGTGAGTCTACTGAGCCCATACCTAGACTCTTTGGCAGGCTCCAACTTCTCAAATGGGGCAAACTTTGCCGTTGTCGGGTCCTCTACCATCCCGAAGCGTGTCCCTTTTTCTTTGAATATTCAAGTCATGCAGTTCATCCACTTCAAGGCTATTGCAGCTGCAGGTTCCAAACATTGGATAAATGATGAAGGTTTCCGGAAAGCACTTTACATGATCGATATCGGACAAAATGACCTTTCTGATTCTTTCACTAAAGGCCTTTCATACGTTCAAGTAACAGAGACAATTCCTTCAGTTATTGAAGAAATCAAGAGTGCGGTTAAGGCTTTATACGATCAAGGTGGAAGGAACTTTTGGATACACAACACCGGGCCGTTGGGTTGTCTCCCTCAAAAACTTTCATTAGTTGAGAAGAAGGATTTGGATCCATATGGATGTCTTTCGAGTTACAATGCGGCTGCAAGATCGTTCAATGAAGCATTGCTCGATTTGTGCAAAGCAATGAGATCTGAATTGAAGGATGCTGTGATAGTTTATGTGGATATATATGCCATCAAGTATGATCTCATTGCCAACTCCACCAAATACGGTTTCTCTACGCCGCTAATGGCATGCTGTGGCAACGGAGGTCCTCCGTACAATTTCAATGTCAGGGGGCTCTGCGGTCAACCTGGCTCTCATGTTTGCGATGAAGGATCCCGATTTGTGAGCTGGGATGGAATTCATTACACCGAAGCCGCAAACACCATCGTGGCCTCAAAGATACTTTCCACGAATTATTCCACACCACGCATTCCATTTGATTTCTTTTGTTGCAGTTAG
Functional Annotation

Protein Analysis

371

Amino Acids

39.88

Weight (kDa)

6.07

Isoelectric Point (pI)

32.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 443
AccB7I CCANNNNNTGG 1 cut(s) 465
AccBSI CCGCTC 1 cut(s) 68
AccI GTMKAC 1 cut(s) 298
AccIII TCCGGA 2 cut(s) 62, 486
AciI CCGC 7 cut(s) 68, 177, 608, 746, 893, 954, 1029
AclWI GGATC 4 cut(s) 710, 723, 981, 994
AcoI YGGCCR 2 cut(s) 103, 211
AcsI RAATTY 1 cut(s) 1011
AcuI CTGAAG 1 cut(s) 567
AcyI GRCGYC 1 cut(s) 256
AfaI GTAC 2 cut(s) 217, 929
AfiI CCNNNNNNNGG 4 cut(s) 209, 366, 436, 465
AgeI ACCGGT 1 cut(s) 236
AhdI GACNNNNNGTC 1 cut(s) 260
AjnI CCWGG 1 cut(s) 961
AjuI GAANNNNNNNTTGG 6 cut(s) 628, 660, 695, 727, 866, 898
AleI CACNNNNGTG 1 cut(s) 1040
AluBI AGCT 3 cut(s) 231, 449, 1002
AluI AGCT 3 cut(s) 231, 449, 1002
Alw21I GWGCWC 1 cut(s) 75
Alw26I GTCTC 2 cut(s) 566, 680
AlwI GGATC 4 cut(s) 710, 723, 981, 994
AlwNI CAGNNNCTG 2 cut(s) 19, 286
Aor13HI TCCGGA 2 cut(s) 62, 486
AoxI GGCC 6 cut(s) 103, 122, 211, 547, 662, 1044
ApeKI GCWGC 4 cut(s) 228, 446, 449, 749
ApoI RAATTY 1 cut(s) 1011
AsiGI ACCGGT 1 cut(s) 236
AspS9I GGNCC 4 cut(s) 123, 369, 662, 920
AsuC2I CCSGG 1 cut(s) 661
AvaII GGWCC 2 cut(s) 369, 920
BaeI ACNNNNGTAYC 2 cut(s) 199, 232
BalI TGGCCA 1 cut(s) 105
BamHI GGATCC 2 cut(s) 715, 986
BanII GRGCYC 2 cut(s) 308, 951
Bbv12I GWGCWC 1 cut(s) 75
BbvI GCAGC 4 cut(s) 240, 436, 458, 736
BccI CCATC 6 cut(s) 95, 245, 386, 851, 1001, 1046
BceAI ACGGC 4 cut(s) 198, 226, 344, 649
BciT130I CCWGG 1 cut(s) 963
BciVI GTATCC 1 cut(s) 642
BclI TGATCA 2 cut(s) 31, 78
BcnI CCSGG 1 cut(s) 661
BcoDI GTCTC 2 cut(s) 566, 680
BfaI CTAG 2 cut(s) 185, 314
BfmI CTRYAG 1 cut(s) 450
BfuAI ACCTGC 1 cut(s) 443
BfuI GTATCC 1 cut(s) 642
BglII AGATCT 1 cut(s) 797
BisI GCNGC 8 cut(s) 177, 229, 447, 450, 747, 750, 893, 1029
BlsI GCNGC 8 cut(s) 178, 230, 448, 451, 748, 751, 894, 1030
Bme1390I CCNGG 2 cut(s) 661, 963
Bme18I GGWCC 2 cut(s) 369, 920
BmeRI GACNNNNNGTC 1 cut(s) 260
BmgT120I GGNCC 4 cut(s) 123, 369, 662, 920
BmiI GGNNCC 5 cut(s) 331, 370, 457, 717, 988
BmrFI CCNGG 2 cut(s) 661, 963
BmsI GCATC 1 cut(s) 802
BplI GAGNNNNNCTC 2 cut(s) 57, 89
BpuMI CCSGG 1 cut(s) 661
Bsa29I ATCGAT 1 cut(s) 507
BsaBI GATNNNNATC 2 cut(s) 509, 714
BsaHI GRCGYC 1 cut(s) 256
BsaWI WCCGGW 3 cut(s) 62, 236, 486
Bsc4I CCNNNNNNNGG 4 cut(s) 209, 366, 436, 465
Bse118I RCCGGY 1 cut(s) 236
Bse3DI GCAATG 3 cut(s) 770, 798, 858
Bse8I GATNNNNATC 2 cut(s) 509, 714
BseAI TCCGGA 2 cut(s) 62, 486
BseBI CCWGG 1 cut(s) 963
BseCI ATCGAT 1 cut(s) 507
BseGI GGATG 6 cut(s) 89, 378, 426, 731, 817, 1012
BseJI GATNNNNATC 2 cut(s) 509, 714
BseLI CCNNNNNNNGG 4 cut(s) 209, 366, 436, 465
BseMI GCAATG 3 cut(s) 770, 798, 858
BseMII CTCAG 2 cut(s) 108, 293
BseRI GAGGAG 1 cut(s) 263
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 4 cut(s) 240, 436, 458, 736
BseYI CCCAGC 1 cut(s) 1002
BsgI GTGCAG 1 cut(s) 32
Bsh1285I CGRYCG 2 cut(s) 214, 241
BshFI GGCC 6 cut(s) 105, 124, 213, 549, 664, 1046
BshTI ACCGGT 1 cut(s) 236
BshVI ATCGAT 1 cut(s) 507
BsiEI CGRYCG 2 cut(s) 214, 241
BsiHKAI GWGCWC 1 cut(s) 75
BsiSI CCGG 5 cut(s) 63, 180, 237, 487, 660
BslFI GGGAC 1 cut(s) 377
BslI CCNNNNNNNGG 4 cut(s) 209, 366, 436, 465
BsmAI GTCTC 2 cut(s) 566, 680
BsmFI GGGAC 1 cut(s) 377
BsmI GAATGC 1 cut(s) 1083
BsnI GGCC 6 cut(s) 105, 124, 213, 549, 664, 1046
Bsp1286I GDGCHC 3 cut(s) 75, 308, 951
Bsp13I TCCGGA 2 cut(s) 62, 486
Bsp143I GATC 9 cut(s) 31, 78, 504, 625, 715, 755, 797, 853, 986
BspACI CCGC 7 cut(s) 68, 177, 608, 746, 893, 954, 1029
BspANI GGCC 6 cut(s) 105, 124, 213, 549, 664, 1046
BspCNI CTCAG 2 cut(s) 107, 294
BspDI ATCGAT 1 cut(s) 507
BspEI TCCGGA 2 cut(s) 62, 486
BspLI GGNNCC 5 cut(s) 331, 370, 457, 717, 988
BspMAI CTGCAG 1 cut(s) 454
BspMI ACCTGC 1 cut(s) 443
BspPI GGATC 4 cut(s) 710, 723, 981, 994
BsrBI CCGCTC 1 cut(s) 68
BsrDI GCAATG 3 cut(s) 770, 798, 858
BsrFI RCCGGY 1 cut(s) 236
BssAI RCCGGY 1 cut(s) 236
BssMI GATC 9 cut(s) 31, 78, 504, 625, 715, 755, 797, 853, 986
BssNI GRCGYC 1 cut(s) 256
Bst2UI CCWGG 1 cut(s) 963
Bst4CI ACNGT 1 cut(s) 881
BstACI GRCGYC 1 cut(s) 256
BstAPI GCANNNNNTGC 1 cut(s) 356
BstC8I GCNNGC 2 cut(s) 328, 904
BstDEI CTNAG 2 cut(s) 94, 302
BstF5I GGATG 6 cut(s) 89, 378, 426, 731, 817, 1012
BstKTI GATC 9 cut(s) 34, 81, 507, 628, 718, 758, 800, 856, 989
BstMAI GTCTC 2 cut(s) 566, 680
BstMBI GATC 9 cut(s) 31, 78, 504, 625, 715, 755, 797, 853, 986
BstMCI CGRYCG 2 cut(s) 214, 241
BstMWI GCNNNNNNNGC 3 cut(s) 356, 446, 614
BstNI CCWGG 1 cut(s) 963
BstNSI RCATGY 1 cut(s) 906
BstSCI CCNGG 2 cut(s) 659, 961
BstSFI CTRYAG 1 cut(s) 450
BstV1I GCAGC 4 cut(s) 240, 436, 458, 736
BstX2I RGATCY 3 cut(s) 715, 797, 986
BstYI RGATCY 3 cut(s) 715, 797, 986
BstZI CGGCCG 1 cut(s) 211
Bsu15I ATCGAT 1 cut(s) 507
BsuI GTATCC 1 cut(s) 642
BsuRI GGCC 6 cut(s) 105, 124, 213, 549, 664, 1046
BsuTUI ATCGAT 1 cut(s) 507
BtgZI GCGATG 1 cut(s) 993
BtsCI GGATG 6 cut(s) 89, 378, 426, 731, 817, 1012
BtsIMutI CAGTG 1 cut(s) 45
BveI ACCTGC 1 cut(s) 443
Cac8I GCNNGC 2 cut(s) 328, 904
CaiI CAGNNNCTG 2 cut(s) 19, 286
Cfr10I RCCGGY 1 cut(s) 236
Cfr13I GGNCC 4 cut(s) 123, 369, 662, 920
ClaI ATCGAT 1 cut(s) 507
CseI GACGC 1 cut(s) 264
Csp6I GTAC 2 cut(s) 216, 928
CspAI ACCGGT 1 cut(s) 236
CviAII CATG 4 cut(s) 418, 502, 903, 971
CviQI GTAC 2 cut(s) 216, 928
DdeI CTNAG 2 cut(s) 94, 302
DpnI GATC 9 cut(s) 33, 80, 506, 627, 717, 757, 799, 855, 988
DpnII GATC 9 cut(s) 31, 78, 504, 625, 715, 755, 797, 853, 986
DriI GACNNNNNGTC 1 cut(s) 260
EaeI YGGCCR 2 cut(s) 103, 211
EagI CGGCCG 1 cut(s) 211
Eam1105I GACNNNNNGTC 1 cut(s) 260
EclXI CGGCCG 1 cut(s) 211
Eco147I AGGCCT 1 cut(s) 549
Eco24I GRGCYC 2 cut(s) 308, 951
Eco32I GATATC 1 cut(s) 511
Eco47I GGWCC 2 cut(s) 369, 920
Eco52I CGGCCG 1 cut(s) 211
Eco57I CTGAAG 1 cut(s) 567
EcoO109I RGGNCCY 2 cut(s) 369, 920
EcoRI GAATTC 1 cut(s) 1011
EcoRII CCWGG 1 cut(s) 961
EcoRV GATATC 1 cut(s) 511
EcoT38I GRGCYC 2 cut(s) 308, 951
FaeI CATG 4 cut(s) 421, 505, 906, 974
FaqI GGGAC 1 cut(s) 377
FatI CATG 4 cut(s) 417, 501, 902, 970
FauNDI CATATG 1 cut(s) 721
FbaI TGATCA 2 cut(s) 31, 78
FblI GTMKAC 1 cut(s) 298
Fnu4HI GCNGC 8 cut(s) 177, 229, 447, 450, 747, 750, 893, 1029
FokI GGATG 6 cut(s) 76, 365, 413, 738, 824, 1019
FriOI GRGCYC 2 cut(s) 308, 951
Fsp4HI GCNGC 8 cut(s) 177, 229, 447, 450, 747, 750, 893, 1029
FspBI CTAG 2 cut(s) 185, 314
GluI GCNGC 8 cut(s) 177, 229, 447, 450, 747, 750, 893, 1029
GsaI CCCAGC 1 cut(s) 1006
HaeIII GGCC 6 cut(s) 105, 124, 213, 549, 664, 1046
HapII CCGG 5 cut(s) 63, 180, 237, 487, 660
HgaI GACGC 1 cut(s) 264
Hin1I GRCGYC 1 cut(s) 256
Hin1II CATG 4 cut(s) 421, 505, 906, 974
HincII GTYRAC 1 cut(s) 959
HindII GTYRAC 1 cut(s) 959
HinfI GANTC 6 cut(s) 149, 171, 283, 295, 317, 533
HpaII CCGG 5 cut(s) 63, 180, 237, 487, 660
Hpy166II GTNNAC 4 cut(s) 130, 170, 299, 959
Hpy188I TCNGA 7 cut(s) 48, 160, 250, 288, 515, 532, 802
Hpy188III TCNNGA 6 cut(s) 63, 76, 382, 487, 601, 990
Hpy8I GTNNAC 4 cut(s) 130, 170, 299, 959
HpyAV CCTTC 7 cut(s) 229, 473, 591, 630, 700, 802, 977
HpyCH4III ACNGT 1 cut(s) 881
HpyCH4IV ACGT 1 cut(s) 558
HpyCH4V TGCA 7 cut(s) 13, 421, 446, 452, 752, 786, 1107
HpyF10VI GCNNNNNNNGC 3 cut(s) 356, 446, 614
HpyF3I CTNAG 2 cut(s) 94, 302
HpySE526I ACGT 1 cut(s) 558
Hsp92I GRCGYC 1 cut(s) 256
Hsp92II CATG 4 cut(s) 421, 505, 906, 974
Kpn2I TCCGGA 2 cut(s) 62, 486
Ksp22I TGATCA 2 cut(s) 31, 78
Kzo9I GATC 9 cut(s) 31, 78, 504, 625, 715, 755, 797, 853, 986
LmnI GCTCC 3 cut(s) 65, 236, 335
Lsp1109I GCAGC 4 cut(s) 240, 436, 458, 736
LweI GCATC 1 cut(s) 802
MaeI CTAG 2 cut(s) 185, 314
MaeII ACGT 1 cut(s) 558
MaeIII GTNAC 2 cut(s) 565, 737
MalI GATC 9 cut(s) 33, 80, 506, 627, 717, 757, 799, 855, 988
MbiI CCGCTC 1 cut(s) 68
MboI GATC 9 cut(s) 31, 78, 504, 625, 715, 755, 797, 853, 986
MboII GAAGA 4 cut(s) 127, 214, 605, 715
MflI RGATCY 3 cut(s) 715, 797, 986
MhlI GDGCHC 3 cut(s) 75, 308, 951
MlsI TGGCCA 1 cut(s) 105
MluCI AATT 5 cut(s) 576, 803, 931, 1011, 1066
MluNI TGGCCA 1 cut(s) 105
MlyI GAGTC 5 cut(s) 143, 165, 292, 304, 311
MmeI TCCRAC 2 cut(s) 177, 357
Mox20I TGGCCA 1 cut(s) 105
MroI TCCGGA 2 cut(s) 62, 486
MscI TGGCCA 1 cut(s) 105
MseI TTAA 2 cut(s) 53, 612
MslI CAYNNNNRTG 2 cut(s) 724, 1040
Msp20I TGGCCA 1 cut(s) 105
MspA1I CMGCKG 1 cut(s) 449
MspI CCGG 5 cut(s) 63, 180, 237, 487, 660
MspR9I CCNGG 2 cut(s) 661, 963
Mva1269I GAATGC 1 cut(s) 1083
MvaI CCWGG 1 cut(s) 963
MwoI GCNNNNNNNGC 3 cut(s) 356, 446, 614
NciI CCSGG 1 cut(s) 661
NdeI CATATG 1 cut(s) 721
NdeII GATC 9 cut(s) 31, 78, 504, 625, 715, 755, 797, 853, 986
NlaIII CATG 4 cut(s) 421, 505, 906, 974
NlaIV GGNNCC 5 cut(s) 331, 370, 457, 717, 988
NspI RCATGY 1 cut(s) 906
OliI CACNNNNGTG 1 cut(s) 1040
PaeI GCATGC 1 cut(s) 906
PceI AGGCCT 1 cut(s) 549
PctI GAATGC 1 cut(s) 1083
PfeI GAWTC 1 cut(s) 533
PflMI CCANNNNNTGG 1 cut(s) 465
PinAI ACCGGT 1 cut(s) 236
PkrI GCNGC 8 cut(s) 178, 230, 448, 451, 748, 751, 894, 1030
PleI GAGTC 5 cut(s) 143, 165, 291, 303, 311
PpsI GAGTC 5 cut(s) 143, 165, 291, 303, 311
PpuMI RGGWCCY 2 cut(s) 369, 920
Psp5II RGGWCCY 2 cut(s) 369, 920
Psp6I CCWGG 1 cut(s) 961
PspFI CCCAGC 1 cut(s) 1002
PspGI CCWGG 1 cut(s) 961
PspN4I GGNNCC 5 cut(s) 331, 370, 457, 717, 988
PspPI GGNCC 4 cut(s) 123, 369, 662, 920
PspPPI RGGWCCY 2 cut(s) 369, 920
PstI CTGCAG 1 cut(s) 454
PstNI CAGNNNCTG 2 cut(s) 19, 286
PsuI RGATCY 3 cut(s) 715, 797, 986
PvuII CAGCTG 1 cut(s) 449
RsaI GTAC 2 cut(s) 217, 929
RsaNI GTAC 2 cut(s) 216, 928
RseI CAYNNNNRTG 2 cut(s) 724, 1040
SaqAI TTAA 2 cut(s) 53, 612
SatI GCNGC 8 cut(s) 177, 229, 447, 450, 747, 750, 893, 1029
Sau3AI GATC 9 cut(s) 31, 78, 504, 625, 715, 755, 797, 853, 986
Sau96I GGNCC 4 cut(s) 123, 369, 662, 920
SchI GAGTC 5 cut(s) 143, 165, 292, 304, 311
ScrFI CCNGG 2 cut(s) 661, 963
SduI GDGCHC 3 cut(s) 75, 308, 951
SfaNI GCATC 1 cut(s) 802
SfcI CTRYAG 1 cut(s) 450
SinI GGWCC 2 cut(s) 369, 920
SmiMI CAYNNNNRTG 2 cut(s) 724, 1040
SphI GCATGC 1 cut(s) 906
Sse9I AATT 5 cut(s) 576, 803, 931, 1011, 1066
SseBI AGGCCT 1 cut(s) 549
SsiI CCGC 7 cut(s) 68, 177, 608, 746, 893, 954, 1029
SspI AATATT 1 cut(s) 409
SspMI CTAG 2 cut(s) 185, 314
StuI AGGCCT 1 cut(s) 549
StyD4I CCNGG 2 cut(s) 659, 961
TaaI ACNGT 1 cut(s) 881
TaiI ACGT 1 cut(s) 561
TaqI TCGA 5 cut(s) 99, 267, 507, 734, 777
TasI AATT 5 cut(s) 576, 803, 931, 1011, 1066
TauI GCSGC 4 cut(s) 179, 749, 895, 1031
TfiI GAWTC 1 cut(s) 533
Tru1I TTAA 2 cut(s) 53, 612
Tru9I TTAA 2 cut(s) 53, 612
TscAI CASTG 1 cut(s) 45
TseI GCWGC 4 cut(s) 228, 446, 449, 749
TspDTI ATGAA 7 cut(s) 415, 492, 543, 681, 780, 996, 1004
TspGWI ACGGA 3 cut(s) 184, 915, 930
TspRI CASTG 1 cut(s) 45
Van91I CCANNNNNTGG 1 cut(s) 465
VpaK11BI GGWCC 2 cut(s) 369, 920
XapI RAATTY 1 cut(s) 1011
XceI RCATGY 1 cut(s) 906
XmiI GTMKAC 1 cut(s) 298
XspI CTAG 2 cut(s) 185, 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.