Prupe.6G308400_v2.0.a1

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
27759465 .. 27762842
3378 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G308400.1

Sequence Viewer

Length: 1323 bp
ATGTACAAAGATATGAAAGGTTCAGGCATAACAAAGGGAGAAGATGAGGAGGAAGACGCTGAATCTTTGCTTGAGAATGGAAGAATTCAGAGGAAAGATAAAGGAGTTGTTGGGGAGGGCACTTTTGGTCGTTCTCCTCGTCCTTTTAATCTAGCATTGCATCATCAACAAATCCCAGACAAAAATGCAGCTGCTGCAAACCATGGAAGAATTGCACCTGATGATGAGAAAAAGGGGCTGGGTTGGGCTCAGTCGGTGGGTCTGATTCTGACACTCTCTGGAGCGGTGCTTCTGATCATTCTCTCAGCCTCAGTCGATGGCCATCTTGGTCCAACAAGGCCCGTCCACATCTTCAACTTCGGCGACTCCAACTCGGACACGGGTGGACTCGTCGCTGGACTCGGATACTTCGTCAATCCCCCCAACGGACGTACCTTCTTCCGTAGATCAACCGGCCGCCTCTCCGACGGACGCCTCGTCATCGACCTCCTCTGCCAGAGTCTGAATGTGAGTCTTTTGAGCCCATACCTAGACTCTTTGGCAGGGTCCAGGTTCTCAAACGGGGCAAACTTTGCCATTGTCGGGTCCTCTACCCTCCCGAAGCGTGTCCCTTTTTCTTTGAATATTCAAGTCATGCAGTTCATCCACTTCAAGGCTACTGCAGGTTCAAAACATTTGATAAATGATGACGGTTTCCAGAAAGCACTGTACATGATCGATATCGGACAAAATGACCTTGCCGATTCATTCACTAAAAACCTTTCATACGCTCAAGTAACAAAGAGAATTCCTTCAGTTATTGCAGAAATCAAGAGTGCGGTTAAGGCTCTATATGATCAAGGTGGAAGGAACTTTTGGATACACAACACTGGGCCGTTGGGTTGTCTCCCTCAAAAGCTTTCATTAGTTGAGAATAAGGATTTGGATCCATATGGATGTCTTTCGAGTTACAATGCAGCTGCGAGATTGTTCAACGAAGCATTGCGCCATTTGTGCAATGGGATGAGATCTGAATTGAAGGATGCTGTGATAGTTTATGTAGATATATATGCCATCAAGTATGATCTCATTGCCAACTCCACCAAATACGGTTTCTCTAGGCCGCTAATGGCATGTTGTGGCAACGGAGGTCCTCCGTACAACTACAATGTTGGGCTGACCTGTGGTCATCCTGGCTCCCAGGTTTGCGACGAAGGATCTCTATTTGTGAACTGGGATGGAATTCATTACACCGAAGCCGCAAACACCATCGTGGCCTCAAAGATACTTTCGATGAATTTTTCCACACCACGCATTCCATTTGATTTCTTTTGTTGCAGTTAG
Functional Annotation

Protein Analysis

441

Amino Acids

47.8

Weight (kDa)

7.57

Isoelectric Point (pI)

34.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 653
AccBSI CCGCTC 1 cut(s) 284
AciI CCGC 5 cut(s) 284, 457, 818, 1103, 1239
AclWI GGATC 3 cut(s) 920, 933, 1204
AcoI YGGCCR 2 cut(s) 319, 454
AcsI RAATTY 4 cut(s) 84, 786, 1221, 1276
AcuI CTGAAG 1 cut(s) 777
AcyI GRCGYC 1 cut(s) 472
AfaI GTAC 4 cut(s) 5, 433, 710, 1139
AfiI CCNNNNNNNGG 3 cut(s) 425, 582, 652
AgsI TTSAA 7 cut(s) 355, 622, 629, 652, 669, 973, 1018
AhdI GACNNNNNGTC 2 cut(s) 476, 1164
AjnI CCWGG 3 cut(s) 548, 1171, 1179
AjuI GAANNNNNNNTTGG 6 cut(s) 838, 870, 905, 937, 1076, 1108
AleI CACNNNNGTG 1 cut(s) 1250
AluBI AGCT 3 cut(s) 191, 898, 959
AluI AGCT 3 cut(s) 191, 898, 959
Alw26I GTCTC 1 cut(s) 890
AlwI GGATC 3 cut(s) 920, 933, 1204
AlwNI CAGNNNCTG 2 cut(s) 194, 502
AoxI GGCC 6 cut(s) 319, 338, 454, 872, 1100, 1254
ApeKI GCWGC 5 cut(s) 188, 191, 194, 956, 959
ApoI RAATTY 4 cut(s) 84, 786, 1221, 1276
Asp700I GAANNNNTTC 1 cut(s) 790
AspLEI GCGC 1 cut(s) 987
AspS9I GGNCC 6 cut(s) 329, 339, 546, 585, 872, 1130
AvaII GGWCC 4 cut(s) 329, 546, 585, 1130
BaeGI GKGCMC 1 cut(s) 122
BaeI ACNNNNGTAYC 2 cut(s) 415, 448
BalI TGGCCA 1 cut(s) 321
BamHI GGATCC 1 cut(s) 925
BanII GRGCYC 2 cut(s) 250, 524
BbsI GAAGAC 1 cut(s) 60
BbvI GCAGC 5 cut(s) 178, 181, 200, 946, 968
BccI CCATC 5 cut(s) 311, 330, 1061, 1211, 1256
BceAI ACGGC 1 cut(s) 859
BciT130I CCWGG 3 cut(s) 550, 1173, 1181
BciVI GTATCC 2 cut(s) 398, 852
BclI TGATCA 2 cut(s) 294, 835
BcoDI GTCTC 1 cut(s) 890
BfaI CTAG 3 cut(s) 152, 530, 1098
BfmI CTRYAG 1 cut(s) 660
BfuAI ACCTGC 1 cut(s) 653
BfuI GTATCC 2 cut(s) 398, 852
BglII AGATCT 1 cut(s) 1007
BisI GCNGC 8 cut(s) 189, 192, 195, 457, 957, 960, 1103, 1239
BlsI GCNGC 8 cut(s) 190, 193, 196, 458, 958, 961, 1104, 1240
Bme1390I CCNGG 3 cut(s) 550, 1173, 1181
Bme18I GGWCC 4 cut(s) 329, 546, 585, 1130
BmeRI GACNNNNNGTC 2 cut(s) 476, 1164
BmgT120I GGNCC 6 cut(s) 329, 339, 546, 585, 872, 1130
BmiI GGNNCC 4 cut(s) 547, 586, 927, 1177
BmrFI CCNGG 3 cut(s) 550, 1173, 1181
BmrI ACTGGG 2 cut(s) 879, 1222
BmsI GCATC 2 cut(s) 169, 1012
BmuI ACTGGG 2 cut(s) 879, 1222
BpiI GAAGAC 1 cut(s) 60
BpmI CTGGAG 1 cut(s) 300
BpuEI CTTGAG 2 cut(s) 92, 756
Bsa29I ATCGAT 1 cut(s) 717
BsaBI GATNNNNATC 3 cut(s) 321, 719, 924
BsaHI GRCGYC 1 cut(s) 472
BsaJI CCNNGG 2 cut(s) 202, 1179
Bsc4I CCNNNNNNNGG 3 cut(s) 425, 582, 652
Bse118I RCCGGY 1 cut(s) 452
Bse1I ACTGG 2 cut(s) 874, 1217
Bse3DI GCAATG 4 cut(s) 155, 980, 1003, 1068
Bse8I GATNNNNATC 3 cut(s) 321, 719, 924
BseBI CCWGG 3 cut(s) 550, 1173, 1181
BseCI ATCGAT 1 cut(s) 717
BseDI CCNNGG 2 cut(s) 202, 1179
BseGI GGATG 6 cut(s) 642, 941, 1008, 1027, 1168, 1222
BseJI GATNNNNATC 3 cut(s) 321, 719, 924
BseLI CCNNNNNNNGG 3 cut(s) 425, 582, 652
BseMI GCAATG 4 cut(s) 155, 980, 1003, 1068
BseMII CTCAG 3 cut(s) 263, 318, 324
BseNI ACTGG 2 cut(s) 874, 1217
BseRI GAGGAG 3 cut(s) 62, 126, 479
BseSI GKGCMC 1 cut(s) 122
BseX3I CGGCCG 1 cut(s) 454
BseXI GCAGC 5 cut(s) 178, 181, 200, 946, 968
BseYI CCCAGC 1 cut(s) 238
Bsh1285I CGRYCG 1 cut(s) 457
BshFI GGCC 6 cut(s) 321, 340, 456, 874, 1102, 1256
BshVI ATCGAT 1 cut(s) 717
BsiEI CGRYCG 1 cut(s) 457
BsiSI CCGG 1 cut(s) 453
BslFI GGGAC 1 cut(s) 593
BslI CCNNNNNNNGG 3 cut(s) 425, 582, 652
BsmAI GTCTC 1 cut(s) 890
BsmFI GGGAC 1 cut(s) 593
BsmI GAATGC 1 cut(s) 1293
BsnI GGCC 6 cut(s) 321, 340, 456, 874, 1102, 1256
Bsp1286I GDGCHC 3 cut(s) 122, 250, 524
Bsp1407I TGTACA 2 cut(s) 3, 708
Bsp143I GATC 8 cut(s) 294, 446, 714, 835, 925, 1007, 1063, 1196
Bsp19I CCATGG 1 cut(s) 202
BspACI CCGC 5 cut(s) 284, 457, 818, 1103, 1239
BspANI GGCC 6 cut(s) 321, 340, 456, 874, 1102, 1256
BspCNI CTCAG 3 cut(s) 262, 317, 323
BspDI ATCGAT 1 cut(s) 717
BspLI GGNNCC 4 cut(s) 547, 586, 927, 1177
BspMAI CTGCAG 1 cut(s) 664
BspMI ACCTGC 1 cut(s) 653
BspPI GGATC 3 cut(s) 920, 933, 1204
BsrBI CCGCTC 1 cut(s) 284
BsrDI GCAATG 4 cut(s) 155, 980, 1003, 1068
BsrFI RCCGGY 1 cut(s) 452
BsrGI TGTACA 2 cut(s) 3, 708
BsrI ACTGG 2 cut(s) 874, 1217
BssAI RCCGGY 1 cut(s) 452
BssECI CCNNGG 2 cut(s) 202, 1179
BssMI GATC 8 cut(s) 294, 446, 714, 835, 925, 1007, 1063, 1196
BssNI GRCGYC 1 cut(s) 472
BssT1I CCWWGG 1 cut(s) 202
Bst2UI CCWGG 3 cut(s) 550, 1173, 1181
Bst4CI ACNGT 3 cut(s) 692, 708, 1091
BstACI GRCGYC 1 cut(s) 472
BstAPI GCANNNNNTGC 2 cut(s) 194, 572
BstAUI TGTACA 2 cut(s) 3, 708
BstDEI CTNAG 3 cut(s) 249, 304, 310
BstDSI CCRYGG 1 cut(s) 202
BstF5I GGATG 6 cut(s) 642, 941, 1008, 1027, 1168, 1222
BstHHI GCGC 1 cut(s) 987
BstKTI GATC 8 cut(s) 297, 449, 717, 838, 928, 1010, 1066, 1199
BstMAI GTCTC 1 cut(s) 890
BstMBI GATC 8 cut(s) 294, 446, 714, 835, 925, 1007, 1063, 1196
BstMCI CGRYCG 1 cut(s) 457
BstMWI GCNNNNNNNGC 4 cut(s) 194, 572, 824, 993
BstNI CCWGG 3 cut(s) 550, 1173, 1181
BstNSI RCATGY 1 cut(s) 1116
BstSCI CCNGG 3 cut(s) 548, 1171, 1179
BstSFI CTRYAG 1 cut(s) 660
BstSLI GKGCMC 1 cut(s) 122
BstV1I GCAGC 5 cut(s) 178, 181, 200, 946, 968
BstV2I GAAGAC 1 cut(s) 60
BstX2I RGATCY 3 cut(s) 925, 1007, 1196
BstYI RGATCY 3 cut(s) 925, 1007, 1196
BstZI CGGCCG 1 cut(s) 454
Bsu15I ATCGAT 1 cut(s) 717
BsuI GTATCC 2 cut(s) 398, 852
BsuRI GGCC 6 cut(s) 321, 340, 456, 874, 1102, 1256
BsuTUI ATCGAT 1 cut(s) 717
BtgI CCRYGG 1 cut(s) 202
BtsCI GGATG 6 cut(s) 642, 941, 1008, 1027, 1168, 1222
BtsIMutI CAGTG 2 cut(s) 704, 867
BveI ACCTGC 1 cut(s) 653
CaiI CAGNNNCTG 2 cut(s) 194, 502
CfoI GCGC 1 cut(s) 987
Cfr10I RCCGGY 1 cut(s) 452
Cfr13I GGNCC 6 cut(s) 329, 339, 546, 585, 872, 1130
ClaI ATCGAT 1 cut(s) 717
CseI GACGC 2 cut(s) 65, 480
Csp6I GTAC 4 cut(s) 4, 432, 709, 1138
CviAII CATG 4 cut(s) 203, 634, 712, 1113
CviQI GTAC 4 cut(s) 4, 432, 709, 1138
DdeI CTNAG 3 cut(s) 249, 304, 310
DpnI GATC 8 cut(s) 296, 448, 716, 837, 927, 1009, 1065, 1198
DpnII GATC 8 cut(s) 294, 446, 714, 835, 925, 1007, 1063, 1196
DriI GACNNNNNGTC 2 cut(s) 476, 1164
EaeI YGGCCR 2 cut(s) 319, 454
EagI CGGCCG 1 cut(s) 454
Eam1105I GACNNNNNGTC 2 cut(s) 476, 1164
EclXI CGGCCG 1 cut(s) 454
Eco130I CCWWGG 1 cut(s) 202
Eco24I GRGCYC 2 cut(s) 250, 524
Eco32I GATATC 1 cut(s) 721
Eco47I GGWCC 4 cut(s) 329, 546, 585, 1130
Eco52I CGGCCG 1 cut(s) 454
Eco57I CTGAAG 1 cut(s) 777
EcoO109I RGGNCCY 2 cut(s) 585, 1130
EcoRI GAATTC 3 cut(s) 84, 786, 1221
EcoRII CCWGG 3 cut(s) 548, 1171, 1179
EcoRV GATATC 1 cut(s) 721
EcoT14I CCWWGG 1 cut(s) 202
EcoT38I GRGCYC 2 cut(s) 250, 524
ErhI CCWWGG 1 cut(s) 202
FaeI CATG 4 cut(s) 206, 637, 715, 1116
FaqI GGGAC 1 cut(s) 593
FatI CATG 4 cut(s) 202, 633, 711, 1112
FauNDI CATATG 1 cut(s) 931
FbaI TGATCA 2 cut(s) 294, 835
Fnu4HI GCNGC 8 cut(s) 189, 192, 195, 457, 957, 960, 1103, 1239
FokI GGATG 6 cut(s) 629, 948, 1015, 1034, 1155, 1229
FriOI GRGCYC 2 cut(s) 250, 524
Fsp4HI GCNGC 8 cut(s) 189, 192, 195, 457, 957, 960, 1103, 1239
FspBI CTAG 3 cut(s) 152, 530, 1098
GlaI GCGC 1 cut(s) 986
GluI GCNGC 8 cut(s) 189, 192, 195, 457, 957, 960, 1103, 1239
GsaI CCCAGC 1 cut(s) 242
GsuI CTGGAG 1 cut(s) 300
HaeIII GGCC 6 cut(s) 321, 340, 456, 874, 1102, 1256
HapII CCGG 1 cut(s) 453
HgaI GACGC 2 cut(s) 65, 480
HhaI GCGC 1 cut(s) 987
Hin1I GRCGYC 1 cut(s) 472
Hin1II CATG 4 cut(s) 206, 637, 715, 1116
Hin6I GCGC 1 cut(s) 985
HinP1I GCGC 1 cut(s) 985
HindIII AAGCTT 1 cut(s) 896
HinfI GANTC 9 cut(s) 62, 265, 365, 387, 399, 499, 511, 533, 743
HpaII CCGG 1 cut(s) 453
Hpy166II GTNNAC 3 cut(s) 346, 386, 1210
Hpy188III TCNNGA 4 cut(s) 279, 598, 697, 811
Hpy8I GTNNAC 3 cut(s) 346, 386, 1210
Hpy99I CGWCG 3 cut(s) 395, 470, 1193
HpyAV CCTTC 5 cut(s) 445, 801, 840, 1012, 1187
HpyCH4III ACNGT 3 cut(s) 692, 708, 1091
HpyCH4IV ACGT 1 cut(s) 430
HpyF10VI GCNNNNNNNGC 4 cut(s) 194, 572, 824, 993
HpyF3I CTNAG 3 cut(s) 249, 304, 310
HpySE526I ACGT 1 cut(s) 430
Hsp92I GRCGYC 1 cut(s) 472
Hsp92II CATG 4 cut(s) 206, 637, 715, 1116
HspAI GCGC 1 cut(s) 985
Ksp22I TGATCA 2 cut(s) 294, 835
Kzo9I GATC 8 cut(s) 294, 446, 714, 835, 925, 1007, 1063, 1196
LmnI GCTCC 2 cut(s) 281, 1181
Lsp1109I GCAGC 5 cut(s) 178, 181, 200, 946, 968
LweI GCATC 2 cut(s) 169, 1012
MaeI CTAG 3 cut(s) 152, 530, 1098
MaeII ACGT 1 cut(s) 430
MaeIII GTNAC 2 cut(s) 775, 947
MalI GATC 8 cut(s) 296, 448, 716, 837, 927, 1009, 1065, 1198
MbiI CCGCTC 1 cut(s) 284
MboI GATC 8 cut(s) 294, 446, 714, 835, 925, 1007, 1063, 1196
MboII GAAGA 6 cut(s) 53, 65, 93, 219, 343, 430
MflI RGATCY 3 cut(s) 925, 1007, 1196
MhlI GDGCHC 3 cut(s) 122, 250, 524
MlsI TGGCCA 1 cut(s) 321
MluCI AATT 6 cut(s) 84, 210, 786, 1013, 1221, 1276
MluNI TGGCCA 1 cut(s) 321
MlyI GAGTC 6 cut(s) 359, 381, 393, 508, 520, 527
MmeI TCCRAC 3 cut(s) 356, 393, 489
Mox20I TGGCCA 1 cut(s) 321
MroXI GAANNNNTTC 1 cut(s) 790
MscI TGGCCA 1 cut(s) 321
MseI TTAA 2 cut(s) 147, 822
MslI CAYNNNNRTG 2 cut(s) 934, 1250
Msp20I TGGCCA 1 cut(s) 321
MspA1I CMGCKG 2 cut(s) 191, 959
MspI CCGG 1 cut(s) 453
MspR9I CCNGG 3 cut(s) 550, 1173, 1181
Mva1269I GAATGC 1 cut(s) 1293
MvaI CCWGG 3 cut(s) 550, 1173, 1181
MwoI GCNNNNNNNGC 4 cut(s) 194, 572, 824, 993
NcoI CCATGG 1 cut(s) 202
NdeI CATATG 1 cut(s) 931
NdeII GATC 8 cut(s) 294, 446, 714, 835, 925, 1007, 1063, 1196
NlaIII CATG 4 cut(s) 206, 637, 715, 1116
NlaIV GGNNCC 4 cut(s) 547, 586, 927, 1177
NspI RCATGY 1 cut(s) 1116
OliI CACNNNNGTG 1 cut(s) 1250
PcsI WCGNNNNNNNCGW 3 cut(s) 136, 408, 474
PctI GAATGC 1 cut(s) 1293
PdmI GAANNNNTTC 1 cut(s) 790
PfeI GAWTC 3 cut(s) 62, 265, 743
PkrI GCNGC 8 cut(s) 190, 193, 196, 458, 958, 961, 1104, 1240
PleI GAGTC 6 cut(s) 359, 381, 393, 507, 519, 527
PpsI GAGTC 6 cut(s) 359, 381, 393, 507, 519, 527
PpuMI RGGWCCY 2 cut(s) 585, 1130
Psp5II RGGWCCY 2 cut(s) 585, 1130
Psp6I CCWGG 3 cut(s) 548, 1171, 1179
PspFI CCCAGC 1 cut(s) 238
PspGI CCWGG 3 cut(s) 548, 1171, 1179
PspN4I GGNNCC 4 cut(s) 547, 586, 927, 1177
PspPI GGNCC 6 cut(s) 329, 339, 546, 585, 872, 1130
PspPPI RGGWCCY 2 cut(s) 585, 1130
PstI CTGCAG 1 cut(s) 664
PstNI CAGNNNCTG 2 cut(s) 194, 502
PsuI RGATCY 3 cut(s) 925, 1007, 1196
PvuII CAGCTG 2 cut(s) 191, 959
RsaI GTAC 4 cut(s) 5, 433, 710, 1139
RsaNI GTAC 4 cut(s) 4, 432, 709, 1138
RseI CAYNNNNRTG 2 cut(s) 934, 1250
SaqAI TTAA 2 cut(s) 147, 822
SatI GCNGC 8 cut(s) 189, 192, 195, 457, 957, 960, 1103, 1239
Sau3AI GATC 8 cut(s) 294, 446, 714, 835, 925, 1007, 1063, 1196
Sau96I GGNCC 6 cut(s) 329, 339, 546, 585, 872, 1130
SchI GAGTC 6 cut(s) 359, 381, 393, 508, 520, 527
ScrFI CCNGG 3 cut(s) 550, 1173, 1181
SduI GDGCHC 3 cut(s) 122, 250, 524
SfaNI GCATC 2 cut(s) 169, 1012
SfcI CTRYAG 1 cut(s) 660
SinI GGWCC 4 cut(s) 329, 546, 585, 1130
SmiMI CAYNNNNRTG 2 cut(s) 934, 1250
SmlI CTYRAG 2 cut(s) 71, 771
SmoI CTYRAG 2 cut(s) 71, 771
Sse9I AATT 6 cut(s) 84, 210, 786, 1013, 1221, 1276
SsiI CCGC 5 cut(s) 284, 457, 818, 1103, 1239
SspI AATATT 1 cut(s) 625
SspMI CTAG 3 cut(s) 152, 530, 1098
StyD4I CCNGG 3 cut(s) 548, 1171, 1179
StyI CCWWGG 1 cut(s) 202
TaaI ACNGT 3 cut(s) 692, 708, 1091
TaiI ACGT 1 cut(s) 433
TaqI TCGA 5 cut(s) 315, 483, 717, 944, 1271
TasI AATT 6 cut(s) 84, 210, 786, 1013, 1221, 1276
TatI WGTACW 2 cut(s) 3, 708
TauI GCSGC 3 cut(s) 459, 1105, 1241
TfiI GAWTC 3 cut(s) 62, 265, 743
Tru1I TTAA 2 cut(s) 147, 822
Tru9I TTAA 2 cut(s) 147, 822
TscAI CASTG 2 cut(s) 711, 874
TseI GCWGC 5 cut(s) 188, 191, 194, 956, 959
TspDTI ATGAA 7 cut(s) 29, 631, 735, 753, 891, 1214, 1289
TspGWI ACGGA 5 cut(s) 431, 441, 483, 1125, 1140
TspRI CASTG 2 cut(s) 711, 874
VpaK11BI GGWCC 4 cut(s) 329, 546, 585, 1130
XapI RAATTY 4 cut(s) 84, 786, 1221, 1276
XceI RCATGY 1 cut(s) 1116
XcmI CCANNNNNNNNNTGG 1 cut(s) 995
XmnI GAANNNNTTC 1 cut(s) 790
XspI CTAG 3 cut(s) 152, 530, 1098
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.